id stringlengths 12 30 | sequence stringlengths 12 4.38k | secondary_structure stringlengths 12 4.38k | aligned_ids listlengths 1 10 | aligned_sequences listlengths 1 10 | split stringclasses 4
values |
|---|---|---|---|---|---|
URS0001A24760_1535422_1-50 | CGCAUGGUAUCUGGCAAAAGAUCAGAUGGCGAUGCGGCCUAACACAAGGU | (((((.((..(((((....).))))...)).))))).............. | [
"URS0001A24760_1535422/1-50",
"URS0001A23728_137584/1-50",
"URS0001A23728_485447/1-50",
"URS0001A2471A_1517416/1-49"
] | [
"CGCAUGGUAUCUGGCAAAAGAUCAGAUGGCGAUGCGGCCUAACACAAGGU",
"CGUAUGGUACCUGGCAAAAGAUCAGGUGGCGAUACGGCCUUAACAGAGGU",
"CGUAUGGUACCUGGCAAAAGAUCAGGUGGCGAUACGGCCUUAACAGAGGU",
"CGUAUGGUGUCCGGCAACAGAUCGGAUGGCGAUGCGGCCUAACUGAGGU-"
] | rfam_14_5_mafft |
URS0001A24761_592678_1-62 | CCGGCACCGGUUCACCCCACUGGCUCACUUUGGGCCGAGCGUUGUUCGGGGACCCGGCGGCC | ..(((.((((....(((((.........................)..))))..))))..))) | [
"URS0001A24761_592678/1-62",
"URS0001A23ABE_1068978/1-52",
"URS0001A23ABE_385957/1-52",
"URS0001A23ABE_1068979/1-52",
"URS0001A23708_1337958/1-37",
"URS0001A23708_1463846/1-37",
"URS0001A24710_928729/1-54",
"URS0001A2475F_882084/1-55"
] | [
"CCGGCACCGGUUCACCCCA-CUGGCUCACUUUGGGCCGAGCGUUGUUCGGGGACCCGGCGGCC",
"CCGGCUCCGGUUCACCCCA-CGUGUC--------GAAGAACGCCG--CGGGGACCCGGCGGCC",
"CCGGCUCCGGUUCACCCCA-CGUGUC--------GAAGAACGCCG--CGGGGACCCGGCGGCC",
"CCGGCUCCGGUUCACCCCA-CGUGUC--------GAAGAACGCCG--CGGGGACCCGGCGGCC",
"CCGGCACCGGUUCACCC----------------------... | rfam_14_5_mafft |
URS0001A2476C_12908_1-55 | GAAAGGUCGGGUAUUUAUCCGGCUGGAUGUACCGAAUGUGUAUAUCCCAUUUAGG | ....((((((((....))))))))((((((((.......))))))))........ | [
"URS0001A2476C_12908/1-55",
"URS0001A2424E_12908/1-51"
] | [
"GAAAGGUCGGGUAUUUAUCCGGCUGGAUGUACCGAAUGUGUAUAUCCCAUUUAGG",
"GAAAGGUCGGGUAUUUACCCGGCUGGAUG---CGAACAC-CGCAUCCCAUUUAGG"
] | rfam_14_5_mafft |
URS0001A2476E_12908_1-70 | GGAUCCACGAGCGGGAUGGAAACAUCCCAAACGAAACGGACCUUUGGUCCAAAGCAACGGAAGACAGAGA | (((((((.........)))....))))..........(((((...))))).................... | [
"URS0001A2476E_12908/1-70",
"URS0001A23D0F_1415159/1-62",
"URS0001A23D0F_272942/1-62"
] | [
"GGAUCCACGAGCGGGAUGGAAACAUCCCAAACGAAACGGACCU--UUGGUCCAAAGCAACGGAAGACAGAGA",
"----------GGGGAGCUACGGCGCCCCAUACGAAACGGACCUGAUAGGUCCAAAGCAACGGAAGACAGAGA",
"----------GGGGAGCUACGGCGCCCCAUACGAAACGGACCUGAUAGGUCCAAAGCAACGGAAGACAGAGA"
] | rfam_14_5_mafft |
URS0001A24798_12908_1-66 | GACGGGAACGUACGGCCGCAACUCCGACGUGCCGCCCGCUUGGGCGGCUUGGGAUUGCGGCGGUGU | .........((((.(((((((..((.....(((((((....)))))))...)).))))))).)))) | [
"URS0001A24798_12908/1-66",
"URS0001A235FF_12908/1-63",
"URS0001A23D8B_12908/1-63",
"URS0001A24159_12908/1-63",
"URS0001A23E38_12908/1-66",
"URS0001A2411A_12908/1-66"
] | [
"GACGGGAACGUACGGCCGCAACUCCGACGUGCCGCCCGCUUGGGCGGCUUGGGAUUGCGGCGGUGU",
"UCGGGAAACACACGGCCGCAACUCCGACGCGUCG---GCGCUGCCGACUUGGGAUUGCGGAUGUGU",
"GCCGGGAAAACACGGCCGCAACUCCGACGUGUCG---GCGCUGCCGACUUGGGAUUGCGGAUGUGU",
"CCGGGAAAAACACGGCCGCAACUCCGACGUGUCG---GCGCUGCCGACUUGGGAUUGCGGAUGUGU",
"AGUGGGAACGCACGGUCGUAACUCUGA... | rfam_14_5_mafft |
URS0001A247A9_911126_1-49 | CGAGACAAUGUCUCAUGGAUGUGGCUUUUUAAAAAAGCUGAACAAAAGG | .((((.....))))...(....(((((.......)))))...)...... | [
"URS0001A247A9_911126/1-49",
"URS0001A246EC_12908/1-42",
"URS0001A232CA_12908/1-41",
"URS0001A242DD_12908/1-43",
"URS0001A24AE9_868131/1-43",
"URS0001A245E1_12908/1-44",
"URS0001A247A9_483214/1-49",
"URS0001A247A9_12908/1-49",
"URS0001A247A9_911128/1-49",
"URS0001A247A9_911117/1-49"
] | [
"--CGAGACAAUGUCUCAUGGAUGUGGCUUUUUAAAAAAGCUGAACAAAAGG",
"---AGGACUAUUGUCCUUGGAUGUGGCGU------AAAGCUGAACGAGAGG",
"--GGGACACA-GUCCCAUGGAUGUGGCG-------AAAGCUGAACGAAAAG",
"--AGGGAUAAUUUCCCUUGGAUGUGGCUU------UAAGCUGAACAAGAGG",
"-UGAGAUGUAAGUCUCAUGGAUGUGGCG-------AAAGCUGAACAAAAGA",
"UGGGAUCACAGGUCCCAUGGAUGUGGCG--... | rfam_14_5_mafft |
URS0001A247AD_1120936_1-59 | CCCGGGGCCGGUCGGCCCCGGGGUUCGGCUGACGCCGGUACCUGACACGGCCGGCGCAG | (((((((((....)))))))))......(((.(((((((..........)))))))))) | [
"URS0001A247AD_1120936/1-59",
"URS0001A24A95_12908/1-52",
"URS0001A23F66_561175/1-58",
"URS0001A23388_1463854/1-47"
] | [
"CCCGGGGCCGGUCGGCCCCGGGGUUCGGCUGACGCCGGUACCUGACACGGCCGGCGCAG",
"----GGGGCUACGAG---UGGUGGCCCCCUGACGCCGGUACCUGACACGGCCGGUGCAG",
"CCCGGGGCCGCCCGGCCCCGGGG-CAAGCUGACGUCGGUACCUGAUACGGCCGGCGCAG",
"-CCUGGUACGGCCGG-----------GGCUGCCGCCGGUUCCUGAUACGGCCGGCGCAG"
] | rfam_14_5_mafft |
URS0001A247B5_12908_1-61 | CGUAUGGUGCUUAGCAAUUAAUAGGAAUUGACUAAGUGGCGAUACGGCCUAAUACAGAGGU | (((((.((..(((((..............).))))...)).)))))............... | [
"URS0001A247B5_12908/1-61",
"URS0001A248F2_12908/1-61",
"URS0001A23676_12908/1-59",
"URS0001A23FAE_12908/1-59",
"URS0001A24275_12908/1-59"
] | [
"CGUAUGGUGCUUAGCAAUUAAUAGGAAUUGACUAAGUGGCGAUACGGCCUAAUACAGAGGU",
"CGUAUGGUGCUUUGCAGCAAUAAAUAGCUGACUAAGUGGCGAUGCGGCCUUAAACAGAGGU",
"CGUAUGGUGCUUGGCAGCAAU-AAUGACUGAUCAAGUGGCGAUGCGGCCUU-AACAGAGGU",
"CGUAUGGUGCUUGGCAGCAAU-AAUGACUGAUCAAGUGGCGAUACGGCCUU-AACAGAGGU",
"CGUAUGGUGCUUGACAGCAAU-AAUGACUGAUCAAGUGGCGAUACGG... | rfam_14_5_mafft |
URS0001A247EB_12908_1-68 | GGGGCAAAAACAGCCCCAAAGUGCGUGUGAAUAGUGUGCUUAUUGGCCAGGUACACGGUUCGUGAAUC | (((((.......)))))..........(((((.((((((((.......)))))))).)))))...... | [
"URS0001A247EB_12908/1-68",
"URS0001A2363E_12908/1-68"
] | [
"GGGGCAAAAACAGCCCCAAAGUGCGUGUGAAUAGUGUGCUUAUUGGCCAGGUACACGGUUCGUGAAUC",
"GGGGCGAAUUAUGCCCCAAAGUGCGUGUGAAUAGUUCGCUCUUUGGCCAGACGGACGGUUCGUGAAUC"
] | rfam_14_5_mafft |
URS0001A247EF_443143_1-63 | GUCCGAGAACCGUGAGGAAACGUCUCCCCUUGCGGAUCCGGCUAAUUUAAAAACCAGAAGGAG | ..(((.((.((((((((..........)))))))).)))))...................... | [
"URS0001A247EF_443143/1-63",
"URS0001A2374C_12908/1-61",
"URS0001A236FF_12908/1-57",
"URS0001A2417D_12908/1-57",
"URS0001A243A1_12908/1-55",
"URS0001A2334E_12908/1-58",
"URS0001A23BD6_12908/1-55",
"URS0001A236BC_12908/1-56",
"URS0001A24835_12908/1-56",
"URS0001A23D05_12908/1-60"
] | [
"GUCCGAGAACCGUGAGGAAACGUCUCCCCUUGCGGAUCCGGCUAAUUUAAAAACCAGAAGGAG",
"AGCUGUGAACCGCGAGGAAACGUCUCCCCUUGCGGAUCCGGACCA-AUAAAAACCAAAGGAG-",
"GCCCCAGAGCCGCGAGGAA--ACGGCCUCUUGCGGAUCGGGUAA---UUUAACCUGAAGGAG-",
"GCCCCAGAACCGCGAGAAA--ACGGCCUCUUGCGGAUCGGGCAA---UUUAACCUAAAGGAG-",
"GACCCAGAACCGUGAGGAA---CGGCCCCUUGCGGAUCG... | rfam_14_5_mafft |
URS0001A247F6_12908_1-32 | GAUUGUAAUUUCUUCUCUACAGUUCGCGGCUG | ((((((............))))).)....... | [
"URS0001A247F6_12908/1-32",
"URS0001A243F8_12908/1-31"
] | [
"GAUUGUAAUUUCUUCUCUACAGUUCGCGGCUG",
"GAUUGUAAUUUCUUCUCUACAG-UCGCGGCUG"
] | rfam_14_5_mafft |
URS0001A2480F_12908_1-141 | GAAAGGGUAUGUAGUUUCCGUACAUACCUGGGCUGGGAUAUCGGAAGGAUACAUUCCGGUAGGAUGCAGCAGUAAAUGAGUUACACCAGACUUCAUUUAUAAAAAGAAGAGACUCAUUUCGCAUUCGCAGCCUCAAUUAGG | ....((((((((.........))))))))((((((.(........................................................................................).))))))........ | [
"URS0001A2480F_12908/1-141",
"URS0001A2486F_12908/1-141",
"URS0001A2339E_12908/1-141"
] | [
"GAAAGGGUAUGUAGUUUCCGUACAUACCUGGGCUGGGAUAUCGGAAGGAUACAUUCCGGUAGGAUGCAGCAGUAAAUGAGUUACACCAGACUUCAUUUAUAAAAAGAAGAGACUCAUUUCGCAUUCGCAGCCUCAAUUAGG",
"GAAAGGGUAUGUAGUUUCCGUACAUGCCUGGGCUGGGAUAUCGGAAGGAUACAUUCCGGUAGGAUGCAGCAGUAAAUGAGUUACACCAGGCUUCAUUUAUAAAUAGAAGAUACUCAUUUCGCAUUCGCAGCCUCAAUUAGG",
"GAAAGGGUAUGUAGUUUCCGU... | rfam_14_5_mafft |
URS0001A2481C_12908_1-32 | CUAUGGUCUGAGAAAUGGCUAUGGCAAAGGAG | ((((((((........))))))))........ | [
"URS0001A2481C_12908/1-32",
"URS0001A2481C_879301/1-32",
"URS0001A2481C_879297/1-32"
] | [
"CUAUGGUCUGAGAAAUGGCUAUGGCAAAGGAG",
"CUAUGGUCUGAGAAAUGGCUAUGGCAAAGGAG",
"CUAUGGUCUGAGAAAUGGCUAUGGCAAAGGAG"
] | rfam_14_5_mafft |
URS0001A24829_12908_1-77 | GGGGAUGAACUUAGAGUCCCCAACGUAUGGGAGUGUUAAUAGUCGCACUUUUGGCCAGGUUCGACGGUUAGUGAAUC | ((((((.........))))))..............(((((.((((.((((......)))).)))).)))))...... | [
"URS0001A24829_12908/1-77",
"URS0001A23F76_12908/1-76",
"URS0001A2373F_915438/1-75",
"URS0001A23AD0_12908/1-75",
"URS0001A23766_12908/1-75",
"URS0001A238BD_12908/1-76",
"URS0001A2377F_873533/1-75",
"URS0001A23512_12908/1-75",
"URS0001A23512_1073367/1-75",
"URS0001A23468_12908/1-75"
] | [
"GGGGAUGAACUUAGAGUCCCCAACGUAUGGGAGUGUUAAUAGUCGCACUUUUGGCCAGGUUCGACGGUUAGUGAAUC",
"GGGGAUACACUUAGAGUCCCC-UGGGUAUGGUGUGUUAAUAGCACAUCCUGUGGCCGGGAUUUGCGGUUAGUGAAUC",
"GGGGAUAAACUUAGAAUCCCU--AUGAAUAUUGUGUUAAUAGUCGUACUUUUGGCCGAGUGCGAUGGUUAGUGAAUC",
"GGGGAUGAACUUAGAGUCCCU--GGUACGGGAGUGUUAAUAGUGAAGCUUUUGGCCGAGUUUCAUG... | rfam_14_5_mafft |
URS0001A24833_12908_1-72 | GGCCACCUUUCGGGGGGGCUUUUACCAUAGGCAAAGCGUUGCUUUGCCGCAUAAGCAAACGGAAGACACAAA | ((((.(((.....))))))).........((((((((...))))))))........................ | [
"URS0001A24833_12908/1-72",
"URS0001A24B2C_12908/1-69",
"URS0001A24263_12908/1-62",
"URS0001A23A47_12908/1-64",
"URS0001A249EF_12908/1-69",
"URS0001A23934_12908/1-69",
"URS0001A2320D_12908/1-69",
"URS0001A234C0_12908/1-69",
"URS0001A24589_12908/1-69",
"URS0001A2354F_12908/1-69"
] | [
"GGCCACCUUUCGGGGGGGCUUUUACCAUAGGCAAAGCGUUGCUUUGCCGCAUAAGCAAACGGAAGACACAAA",
"GGCCACCCUC---GGGGGGCUUUACCAUCGGCAAAGCAUUGCUUUGUCGCUUAAGCAAACGGAAGACAGAAA",
"GGCCACCUCU--GGGGGGGCUUUACCAAACG------GUGAAUCCGCCCAUAUAGCAAACGG-AGACAGAA-",
"GGCCACCCUA---GGGGGGCUACAACACAGGCAG---GUUAUCCUGCCG--UAAGCAAACGGAAGACAGAAA",
"GGC... | rfam_14_5_mafft |
URS0001A2483E_1111729_1-64 | ACUCAGGCACGGUCCCGUUGAGCAUGCUCGGUGGGGUAUCGACCUGAAGUUCAAUCCUGAGGGA | (((((((......(((..((((....))).)..)))......)))).))).............. | [
"URS0001A2483E_1111729/1-64",
"URS0001A23CEC_12908/1-64",
"URS0001A24938_12908/1-55"
] | [
"ACUCAGGCACGGUCCCGUUGAGCAUGCUCGGUGGGGUAUCGACCUGAAG-UUCAAUCCUGAGGGA",
"ACUCAGGCACGAUCGUCAGAUCCGU-UUUGCUGGCGAAGCGACCUGAAGUUUCAAUCCUGAGGGA",
"ACUCGGGCACGAUCCGCG----------UCCUGUGGAACCGACCCGUAGUUUCAAUCCUGAGGGA"
] | rfam_14_5_mafft |
URS0001A2484F_12908_1-94 | CUGACGACGGCGCAUGGGUGGAGAUAGGUGUUGAGCGCCCAUUGCCCCUCAGGACCGAAAAGCGGUUUCGGUUGGGGCAGCGCCUGAACGUCAG | (((((...(((((..((((...(.(.(....).).)))))..(((((.....((((((.........)))))).)))))))))).....))))) | [
"URS0001A2484F_12908/1-94",
"URS0001A23606_12908/1-94",
"URS0001A2329F_12908/1-94",
"URS0001A2329F_1110509/1-94",
"URS0001A24187_12908/1-94",
"URS0001A2498F_12908/1-94"
] | [
"CUGACGACGGCGCAUGGGUGGAGAUAGGUGUUGAGCGCCCAUUGCCCCUCAGGACCGAAAAGCGGUUUCGGUUGGGGCAGCGCCUGAACGUCAG",
"CUGACAACGGCGCAUGGGUGGAGAUAGGUGUUGAGCGCCCAUUGCCCCUCAAGACCGCAUCGCGGUACAGAGCAGGGCAGCGCCUGAACGUCAG",
"CUGACGACGGCGCAUGGGUGGAGAUAGGUGUUGAGCGCCCUUUGCCCCUCAGAACCGCGAAGCGGUUUUCUGCUGGGCAGCGUCUGAACGUCAG",
"CUGACGACGGCGCAU... | rfam_14_5_mafft |
URS0001A2485B_12908_1-63 | CUGUAAAGAUAUGUUGGCCGUAGGGCCAUCUCCGAGUUUUAGGAAGCGGAACAUAUCGAUGAA | .......((((((.(((((....)))))..((((............)))).))))))...... | [
"URS0001A2485B_12908/1-63",
"URS0001A241F9_12908/1-59",
"URS0001A2366A_12908/1-62"
] | [
"CUGUAAAGAUAUGUUG-GCCGUAGGGCCAUCUCCGAGUUUUAGGAAGCGGAACAUAUCGAUGAA",
"CUGUAAAGAUAUGUUGAGCCGUAGAGCCGCGACCU---UUUACAAAA--GGACAUAUCGAUGAA",
"CUGUAAAGAUAUGUUG-GCUGUAGAGCCAUCUCCGAA-UUUAGGAAACGGAACAUAUCGACGAA"
] | rfam_14_5_mafft |
URS0001A24876_1189620_1-28 | UAACCUCUGGCGAGAUCCGCGUAUGUUG | ((((...(.(((.....)))..).)))) | [
"URS0001A24876_1189620/1-28",
"URS0001A23379_12908/1-28",
"URS0001A24876_12908/1-28",
"URS0001A23FFB_12908/1-28",
"URS0001A23F07_12908/1-28"
] | [
"UAACCUCUGGCGAGAUCCGCGUAUGUUG",
"CAACCUCUGGCGAGGGACGUGUAUGUUG",
"UAACCUCUGGCGAGAUCCGCGUAUGUUG",
"CAACCUCUGGCGAGAUCCGUGUAUGUUG",
"CAACCUCUGGCGAAAUCCGCGAAUGUUG"
] | rfam_14_5_mafft |
URS0001A24886_12908_1-34 | CUAUGUCUGACAUUACUAGACAUGGCGGAAGGAG | ((((((((.........))))))))......... | [
"URS0001A24886_12908/1-34",
"URS0001A23941_12908/1-33",
"URS0001A23970_12908/1-29",
"URS0001A232DD_12908/1-33",
"URS0001A23FF4_12908/1-31",
"URS0001A2474C_12908/1-31",
"URS0001A23FA9_12908/1-32",
"URS0001A24754_12908/1-29",
"URS0001A24909_12908/1-29",
"URS0001A24544_12908/1-32"
] | [
"CUAUGU-CUGACAUUACUAGACAUGGCGGAAGGAG",
"CUAUAU-CAGAAGUAA-UUGAUAUGGCGGAAGGAG",
"CUAUGGACGUGAGU------UCAUGGCGGAAGGAG",
"CUAUGU-UU-UUAUAACAAAACAUGGCGGAAGGAG",
"CUAUGG-UUAAGGU---UAACUAUGGCGGAAGGAG",
"CUAUGU-CUAAGAU---UAGAUAUGGCGGAAGGAG",
"CUAUGU-CA-AAGUAA-UUGAUAUGGCGGAAGGAG",
"CUAUGGACUAAAGU------CCAUGGCG... | rfam_14_5_mafft |
URS0001A2488A_12908_1-77 | GGCACCUUGCUUAGAAGUUGCCGCGCCGGAUAGUGUUAAUAGUCGUGCCUUUGGCCGGACACGAUGGUUAGGGAAUC | ((((.(..........).)))).............(((((.((((((.((......)).)))))).)))))...... | [
"URS0001A2488A_12908/1-77",
"URS0001A23525_12908/1-77",
"URS0001A23E49_12908/1-77",
"URS0001A236D6_12908/1-77",
"URS0001A23F24_12908/1-77",
"URS0001A23C48_12908/1-77",
"URS0001A24286_12908/1-77",
"URS0001A242BB_12908/1-72"
] | [
"GGCACCUUGCUUAGAAGUUGCCGCGCCGGAUAGUGUUAAUAGUCGUGCCUUUGGCCGGACACGAUGGUUAGGGAAUC",
"GGUAGCUUGCUUAGAAGUUGCCGCGCCGGAUAGUGUUAAUAGUCGUGCCUUUGGCCGGACACGAUGGUUAGGGAAUC",
"GGCAGCUUGCUUAGAAGUUGCCGCGCCGGAUAGUGUUAAUAGUCGUGCCUUUGGCCGGACACGACGGUUAGGGAAUC",
"GGCAGCUUGCUUAGAAGUUGCCGCGCCGGAGAGUGUUAAUAGUCGUGCCUUUGGCCGGACACGAUG... | rfam_14_5_mafft |
URS0001A2488B_1121363_1-66 | ACUCGGGCACGAUCCCUGGACGUUAUACAAGGCCUUGGAACCGACCCGAUGUUCAAUCCUGAGGGA | ((.((((.....(((..((.............))..))).....))))..)).............. | [
"URS0001A2488B_1121363/1-66",
"URS0001A245E5_1717/1-60",
"URS0001A245E5_1166015/1-60",
"URS0001A23C2C_1450522/1-60",
"URS0001A23AC8_1125779/1-59",
"URS0001A24087_196164/1-55"
] | [
"ACUCGGGCACGAUC----CCUGGACGUUAUACAAGGCCUUGGAACCGACCCGAUGU-UCAAUCCUGAGGGA",
"ACUCGAGCACGAUCUUCACCGUGAUGU-----------GGAGAACCGACUCGAAGUAUCAAUCCUGAGGGA",
"ACUCGAGCACGAUCUUCACCGUGAUGU-----------GGAGAACCGACUCGAAGUAUCAAUCCUGAGGGA",
"ACUCGAGCACGAUCUUCAUCGUGAUGU-----------GGAGAACCGACUCGAAGUAUCAAUCCUGAGGGA",
"ACUCAGG... | rfam_14_5_mafft |
URS0001A2488F_12908_1-76 | AUGCAAAUGGUGUUUGUGGGUUUCCAUGAAGCCGUGGGGCAGGGAUUGCGCAAUACCUGUACCCCGCCAUUUGCCA | ..(((((((((((((((((....))))))).....(((.((((............))))..))))))))))))).. | [
"URS0001A2488F_12908/1-76",
"URS0001A24673_194439/1-76"
] | [
"AUGCAAAUGGUGUUUGUGGGUUUCCAUGAAGCCGUGGGGCAGGGAUUGCGCAAUACCUGUACCCCGCCAUUUGCCA",
"ACGCGAAUGGUGUUCGUGCGUCCGCAUGAAGCCGUGAAAGCAGGGAUGCGCAAUACCUGUUUUCCGCCAUUUGCAC"
] | rfam_14_5_mafft |
URS0001A248A1_12908_1-78 | UUGCAAGUGGUGUUCAUAGCUUAUAUGAAGCCAAGGAGCAUAUGGGAUGCGCAAUACCAGUGUUCCCGCCAUUUGCUU | ..((((((((((((((((.....)))))).....((((....(((...........)))...)))))))))))))).. | [
"URS0001A248A1_12908/1-78",
"URS0001A23319_331678/1-75"
] | [
"UUGCAAGUGGUGUUCAUAGCUUAU-AUGAAGCCAAGGAGCAUAUGGGAUGCGCAAUACCAGUGUUCCCGCCAUUUGCUU",
"UUGCAAGUGGUGUUCAUGUGGUAUCCUGAAUCCAAGGGACA---GGGAUGCGCAAUACCUG-AUCCCCACCAUUUGUAU"
] | rfam_14_5_mafft |
URS0001A248A8_12908_1-83 | AAGGUUCCGGUUCACGCCUGAGCCACCGCCCUGGGCCAGAAACGUGGCGAGUGCGGUCAAGCGAUGACGGCGACCCGGCGACC | ..(((.((((....((((..................................................))))..))))..))) | [
"URS0001A248A8_12908/1-83",
"URS0001A235C5_1246995/1-70",
"URS0001A235C5_12908/1-70",
"URS0001A24822_12908/1-70",
"URS0001A237F5_543632/1-70",
"URS0001A234CE_1120949/1-70"
] | [
"AAGGUUCCGGUUCACGCCUGAGCCACCGCCCUGGGCCAGAAACGUGGCGAGUGCGGUCAAGCGAUGACGGCGACCCGGCGACC",
"AAGGUUCCGGUUCACGCUCGAGUCGUCCGCCCUAGC-------------GGGGCGGUUCGGUGCUGACGGCGACCCGGCGACC",
"AAGGUUCCGGUUCACGCUCGAGUCGUCCGCCCUAGC-------------GGGGCGGUUCGGUGCUGACGGCGACCCGGCGACC",
"AAGGUUCCGGUUCACGCCCGAGCCCACCGCCCUGGC------------... | rfam_14_5_mafft |
URS0001A248A9_1331007_1-60 | CGUAUGGUGUUUGGUGUCAAUUGUGGCGACCAGAUGGCGAUACGGCCCAAGUAUUGAGGU | (((((.((..(((((.............)))))...)).)))))................ | [
"URS0001A248A9_1331007/1-60",
"URS0001A24685_12908/1-52",
"URS0001A24685_715451/1-52",
"URS0001A248FB_12908/1-52",
"URS0001A247BA_12908/1-53",
"URS0001A244EB_12908/1-47",
"URS0001A24A10_1195246/1-55",
"URS0001A23EA1_1197174/1-56",
"URS0001A23EA1_12908/1-56",
"URS0001A233EC_12908/1-51"
] | [
"CGUAUGGUGUUUGGUGUCAAUUGUGGCGACCAGAUGGCGAUACGGCCCAAGUAUUGAGGU-",
"CGUAUGGUGUUUGGCUUC--------GGGCCAAAUAGCGAUACGGCCUCA-UAUUGAAGGU",
"CGUAUGGUGUUUGGCUUC--------GGGCCAAAUAGCGAUACGGCCUCA-UAUUGAAGGU",
"CGUAUGGUGUUUGGCUUC--------GGGCCAGAUAGCGAUACGGCCUCA-UAUUGAAGGU",
"CGUAUGGUGUUUGACAGC-AAGACU--GAUCAGAUUGCGAUACGGCC... | rfam_14_5_mafft |
URS0001A248B6_12908_1-67 | UAUAUUUUGCCGCGCUAAUUAAAAAUUAAUUAGCUACAUAAUAAUCAUUUAUAACAAUAUUGGCAUG | ..............((((((.......)))))).................................. | [
"URS0001A248B6_12908/1-67",
"URS0001A23BD8_12908/1-57",
"URS0001A24864_12908/1-67",
"URS0001A23BA9_12908/1-63",
"URS0001A232B5_12908/1-59",
"URS0001A235B5_12908/1-65",
"URS0001A23640_12908/1-65",
"URS0001A24874_487796/1-62",
"URS0001A24874_12908/1-62",
"URS0001A233D4_12908/1-61"
] | [
"UAUAUUUUGCCGCGC--UAAUUAAAAAUUAAUUAGC-UACAUAAUAAUCAUUUAUAACAAUAUUGGCAUG",
"UAGU-UUUGCCACCU--UAA----------AUUAUCAUACAUAAUAAACAUUUAAAACAAUUUUGGCAUG",
"UAUA-UUUGCACCGUC-UAAUUAAAAGUUAAUUAGGCUACAUAAGAAUCAUUUU-AACAAUAUUGGCAUG",
"UAAU-UUUGCAAGC---UGAUAGAAAAUCUAUCUG--UACAUAAUAAUCAUUGA-ACCAAUAUUGGCAUG",
"UAUC-UUUGC-... | rfam_14_5_mafft |
URS0001A248B8_12908_1-70 | UAAUUUUGCGCCGUCGAAUCUAAAAAGUUUGGAGCGACUACAUAAAAAUCAUUUAAAUAAUAUUGGCAUG | .............(((..(.............).)))................................. | [
"URS0001A248B8_12908/1-70",
"URS0001A2377D_12908/1-67",
"URS0001A241CD_12908/1-69",
"URS0001A23327_12908/1-61",
"URS0001A2342D_12908/1-59",
"URS0001A24150_12908/1-58",
"URS0001A23CBD_12908/1-60",
"URS0001A23D8D_12908/1-62",
"URS0001A23340_12908/1-68",
"URS0001A249D6_12908/1-68"
] | [
"UAAUUUUG-CGCCGUCGAAUCUAAAAAGUUUGGAGCGACUACAUAAAAAUCAUUUAAAU-AAUAUUGGCAUG",
"UACCUUUG-CACCGUCUUACAAAA--AGUUUGUAGGC--UACAUAAUAAUUAUUUUUAUCAAUAUUGGCAUG",
"UACCUUUG-CACCGUCUAAAC-GAAAAGUUCGUGGCGACUACAUAAUAAACAUUUAAAU-AAUUUUAGCAUG",
"UAUAUUUGCCAUCGCUUUAAUUAGCGAAA----------UACAUAACAAUCAUUGAAAU-AAUAUUAGCAUG",
"UAU... | rfam_14_5_mafft |
URS0001A248D5_1122610_1-74 | CUGUCGAGGCCACCUUCCCUCCCAAAAUCGCUCCUCGAGAGCGUCUACCCCGGUACCUGACACGGCCGGAGAGA | ((.((((((.......................)))))).))..(((.(.(((((..........))))).)))) | [
"URS0001A248D5_1122610/1-74",
"URS0001A231C5_1380388/1-50",
"URS0001A246C3_1380392/1-50",
"URS0001A23371_1844/1-47",
"URS0001A23CEA_12908/1-45"
] | [
"CUGUCGAGGCCACCUUCCCUCCCAAAAUCGCUCCUCG-AGAGCGUCUACCCCGGUACCUGACACGGCCGGAGAGA",
"------------------------CGACCCGCACCCGCGGGUCGUCUACCCCGGUACCUGACACGGCCGGAGAG-",
"------------------------CGACCAGCGACCGCUGGUCGUCUACCCCGGUACCUGACACGGCCGGAGAG-",
"----------------------------CGCCCCGUGAGGGGCGUCUACCCCGGUACCUGAUACGGCCGGAG... | rfam_14_5_mafft |
URS0001A248ED_519442_1-50 | CCUGUUUAGGCAGGUCGGAAUGUGGCCGGCGGAGCCGGCUGAACCACCCA | (((((....)))))..((.....(((((.......)))))...))..... | [
"URS0001A248ED_519442/1-50",
"URS0001A24871_12908/1-50",
"URS0001A242EF_12908/1-50",
"URS0001A24580_12908/1-50",
"URS0001A23F4A_1033806/1-48"
] | [
"CCUGUU-UAGGCAGGUCGGAAUGUGGCCGGCGGAGCCGGCUGAACCACCCA",
"CCUGUCAUCGACAGGACGGAAUGUGGCCGGGCUC-CCGGCUGAACCACCCA",
"CCUGUCAUCGACAGGACGGAAUGUGGCCGGACUC-CCGGCUGAACCACGCA",
"CCUGUCAUCGACAGGACGGAAUGUGGCCGGACUC-CCGGCUGAACCACCCA",
"CCUGUU-UAGGCAGGACGGAAUGUGGCCGCCUCG--CGGCUGAACCACCCA"
] | rfam_14_5_mafft |
URS0001A24905_1448860_1-55 | CCCGAGGAAUCGGGACGAAAUGUGGGUCGGCGUCGAACGCCGCCCGAAUCGAAAG | (((((....)))))..((.....(((.(.............))))...))..... | [
"URS0001A24905_1448860/1-55",
"URS0001A23F89_12908/1-55",
"URS0001A2399C_12908/1-55",
"URS0001A23689_12908/1-55",
"URS0001A238CC_469382/1-54"
] | [
"CCCGAGGAAUCGGGACGAAAUGUGGGUCGGCGUCGAACGCCGCCCGAAUCGAAAG",
"CCCGAGAGCUCGGGACGAAAUGUGGGCCGGCGUCGACCGUCGCCCGAAUCGCAAG",
"CCCGAGUGAUCGGGACGAAAUGUGGGUCGGCGUCGAACGUCGCCCGAAUCGCAAG",
"CCCGAGAGAUCGGGACGAAAUGUGGGUCGACGUCGAACGUCGCCCGAAUCGCAAG",
"CCCGAGAACUCGGGACGAAAUGUGGA-GGGCGUCGAACGCGCUCCGAAUCACAAG"
] | rfam_14_5_mafft |
URS0001A24912_12908_1-34 | CUCUGUUUCGGCAAACGAUUCAGGGCGGAAAGAG | (((((..(((.....)))..)))))......... | [
"URS0001A24912_12908/1-34",
"URS0001A235DB_1631346/1-32",
"URS0001A239AB_1380372/1-34",
"URS0001A24912_1071072/1-34",
"URS0001A2421D_1408254/1-34",
"URS0001A24912_1200792/1-34",
"URS0001A24912_1393/1-34",
"URS0001A24912_1679167/1-34",
"URS0001A24912_358681/1-34",
"URS0001A24912_1144308/1-34"
] | [
"CUCUGUUUCGGCAAACGAUUCAGGGCGGAAAGAG",
"CUCUGUUUCGUC--UCGAUUCAGGGCAAAGUGAG",
"CUCUGUUUCAGCACAUGAUUCAGGGCGGAAAGAG",
"CUCUGUUUCGGCAAACGAUUCAGGGCGGAAAGAG",
"CUCUGUUUCGGCAAACGAUUCAGGGCAAAAAGAG",
"CUCUGUUUCGGCAAACGAUUCAGGGCGGAAAGAG",
"CUCUGUUUCGGCAAACGAUUCAGGGCGGAAAGAG",
"CUCUGUUUCGGCAAACGAUUCAGGGCGGAAAGAG"... | rfam_14_5_mafft |
URS0001A24924_1280674_1-78 | GGGGACGCGUCUUAGAAUCCCCGCAGCCCGAUGGUGUUAAUAGCUCUUUCCAUGGCCGGGAAGAGUGGUUAGUGAAUC | (((((............)))))..............(((((.(((((((((......))))))))).)))))...... | [
"URS0001A24924_1280674/1-78",
"URS0001A23958_12908/1-75"
] | [
"GGGGACGCGUCUUAGAAUCCCCGCAGCCCGAUGGUGUUAAUAGCUCUUUCCAUGGCCGGGAAGAGUGGUUAGUGAAUC",
"-GGGGAGAGGCUUAGAAUCCCCGCAGACGG--CGUGUUAAUAGCAGUGUCUUUGGCCGGGCAUUGUGGUUAGUGAAUC"
] | rfam_14_5_mafft |
URS0001A24931_1434104_1-54 | CGGGAUGAGAGUCCCGUAGGAGUGUGGCCGAAGUAACUUUGGCUGAACCGUGAA | (((((......)))))..((.....(((((.........)))))...))..... | [
"URS0001A24931_1434104/1-54",
"URS0001A233D1_547558/1-47",
"URS0001A231B9_12908/1-52",
"URS0001A24931_2226/1-54"
] | [
"CGGGAUGAGAGUCCCGUAGGAGUGUGGCCGAAGUAACUUUGGCUGAACCGUGAA",
"-ACGGGAAGAAUCCCGUUGGAGUGUGGCC------UUUAUGGCUGAACCGUCAA",
"-CGGGAUUAGUUCCCGUUGGAGUGUGACC-CUGCAGACAGGGUUGAACCGUGAA",
"CGGGAUGAGAGUCCCGUAGGAGUGUGGCCGAAGUAACUUUGGCUGAACCGUGAA"
] | rfam_14_5_mafft |
URS0001A24937_12908_1-52 | CCUGUAUAACUCAGGUUGGUGCGGGAUGUGGCUUUCACGGCUGAACCGUUAA | ((((.......)))).......((.....((((.....))))...))..... | [
"URS0001A24937_12908/1-52",
"URS0001A23336_12908/1-51",
"URS0001A233AF_12908/1-52"
] | [
"CCUGUAUAACUCAGGUUGGUGCGGGAUGUGGCUUUCACGGCUGAACCGUUAA",
"CCUGUAUAACUCAGGUUGAUGCGGGAUGUGGCUUU-ACGGCUGAACCGUUAA",
"CCUGUAUAGAUCAGGUUGACGCGGGAUGUGGCUUUUGUGGCUGAACCGUUAA"
] | rfam_14_5_mafft |
URS0001A2493D_1510391_1-66 | CGCCGUGAACCGUGAGGAACUGUCUCCCCUUGCGGAUCCGGAAAAAUAUCACAGAAAAAGAAGGAG | ..(((.((.((((((((..........)))))))).)))))......................... | [
"URS0001A2493D_1510391/1-66",
"URS0001A23A67_338966/1-60",
"URS0001A242DB_12908/1-64",
"URS0001A23808_269799/1-63",
"URS0001A24840_12908/1-56",
"URS0001A23C5E_12908/1-56",
"URS0001A2375B_12908/1-63",
"URS0001A23E53_12908/1-63",
"URS0001A24038_35554/1-63",
"URS0001A24038_12908/1-63"
] | [
"CGCCGUGAACCGUGAGGAACU-GUCUCCCCUUGCGGAUCCGGAAAAAUAUCACAGAAAAAGAAGGAG",
"CGCCAAGAACCACGAGGACA--GUCUCCCCUUGUGGAUCGGGCAAAAUUCAUGAUCAAGGAG-----",
"GACCGUGAACCGUGAGGAAAC-GUCUCCCCUUGCGGAUCCGGCGAAAUUCAAGCAAAUAAAGGAG--",
"GUCCGUGAACCGUGAGGAAGC-GCCUCCCCUUGCGGAUCCGGCAAAAUUCAUCAGUAAAAGGAG---",
"GACCCAGAACCGUGAGGA----A... | rfam_14_5_mafft |
URS0001A24944_1121923_1-54 | CGCUUGGUGUGCAACUUCGGGUUGUAUAGCGAGGCGGCCUUAAAUAAGAAAGGU | (((((.((..(((((.....)))))...)).))))).................. | [
"URS0001A24944_1121923/1-54",
"URS0001A2407A_1127673/1-51",
"URS0001A23B96_12908/1-52",
"URS0001A23EA7_1085623/1-52",
"URS0001A23460_1121922/1-53",
"URS0001A242C4_12908/1-52",
"URS0001A24757_1129793/1-51",
"URS0001A23B6C_12908/1-51",
"URS0001A24243_493475/1-51",
"URS0001A24226_12908/1-51"
] | [
"CGCUUGGUGUGCAACUUCGGGUUGUAUAGCGAGGCGGCCUUAAAUAAGAAAGGU",
"CGUAUGGUGUGCAACUUCGGGUUGUAUAGCGAUACGGCC-CAGA-AAUGAGGU-",
"CGUAUGGUGUGCAACUUCGGGUUGUAUAGCGAUGCGGCC-UACA-UUUAAAGGU",
"CGUUUGGUGUGCAACUUCGGGUUGUAUAGCGAGACGGCC-UAAA-AAAUAAGGU",
"CGUUUGGUGUACAACUUCGGGUUGUAUAGCGAGACGGCC-UAAAUAAAUAAGGU",
"CGUAUGGUGUGCGAC... | rfam_14_5_mafft |
URS0001A24954_1122999_1-50 | UCGGUGCCGGUUCACGCCGCCCUUCGGGGCUUCGAUGGCGACCCGGCGCC | ..(((.((((....((((..................))))..)))).))) | [
"URS0001A24954_1122999/1-50",
"URS0001A2430E_12908/1-49",
"URS0001A235CB_12908/1-41",
"URS0001A233C6_12908/1-43",
"URS0001A241F6_1210045/1-45",
"URS0001A24763_1463845/1-45",
"URS0001A24247_1437610/1-47",
"URS0001A2346C_12908/1-45",
"URS0001A24427_12908/1-45",
"URS0001A23329_1449048/1-42"
] | [
"UCGGUGCCGGUUCACGCCGCCCUUCGGGGCUUCGAUGGCGACCCGGCGCC-",
"UCGGUACCGGUUCACGUCC-CGCCCACGGGGGCGGCGACGACCCGGCGCC-",
"CAGGUUCCGGUUCACG---------UCAUCGCCGAUGACGACCCGGCGCC-",
"GACGGUCCGGUUCACGCCGUC--------AGCAGACGGCGACCCGGCGCCC",
"CCGGUUCCGGUUCACGG-----CACGCAUCGGGCGUGCCGACCCGGCGCC-",
"CUGGCUCCGGUUCACGG-----CACGCAUC... | rfam_14_5_mafft |
URS0001A2495F_12908_1-106 | UGAUAGCUAAGAAGCGGAGGUUGCCGAGAAAACUGUGAAUUCAGGUUUUUGGGUUUUUCGUGGAGCGAAUGUCAAGAGACCGAAAGGUCUGUAAACCUGGCGACAA | .............(((((((...(((((...................)))))..)))))))........((((....((((....))))............)))). | [
"URS0001A2495F_12908/1-106",
"URS0001A23B84_12908/1-105",
"URS0001A248BF_12908/1-105",
"URS0001A2495F_592026/1-106"
] | [
"UGAUAGCUAAGAAGCGGAGGUUGCCGAGAAAACUGUGAAUUCAGGUUUUUGGGUUUUUCGUGGAGCGAAUGUCAAGAGACCGAAAGGUCUGUAAACCUGGCGACAA",
"UGAUAGCUAAGAAGCGGAGGUUGCCGAGAAUACUGCAAAAGUGGG-UUUUGGGUUUUUCGUGGAGCGAAUGUCAAGAGGCCGAAAGGUCUGUAAACCUGGCGACAA",
"UGAUAGCUAAGAAGCGGAGGUUGCCGAGAAUACUGCAAAAGCAGG-UUUUGGGUUUUUCGUGGAGCGAAUGUCAAGAGACCGAAAGGUCUG... | rfam_14_5_mafft |
URS0001A2497C_12908_1-42 | CUCUGGCGCUGGACAAAGAGCUUGAUCACCAGGGCAAAGGAG | ((((((......................))))))........ | [
"URS0001A2497C_12908/1-42",
"URS0001A245C9_360094/1-35",
"URS0001A245C9_1094181/1-35",
"URS0001A248A2_1133569/1-33",
"URS0001A2438F_12908/1-35"
] | [
"CUCUGGCGCUGGACAAAGAGCUUGAUCACCAGGGCAAAGGAG",
"------CUCUGUGGUAAAAA-UUGCUCAACAGGGCAAAGGAG",
"------CUCUGUGGUAAAAA-UUGCUCAACAGGGCAAAGGAG",
"CUCUGGCUCAGCAAAUGA---------ACCAGGGCAAAGGAG",
"CUCUAUUUCUGACAAAAGAU-------UUUAGGGCAAAGGAG"
] | rfam_14_5_mafft |
URS0001A24985_12908_1-64 | GUGAUGUCGGCAAGGGUGGACGAUGCGGCCCGAGUCCUGGUAACAGGAUAAGCCGAAAGAUCAC | (((((.(((((..((((...((...))))))..(((((......)))))..)))))...))))) | [
"URS0001A24985_12908/1-64",
"URS0001A240EF_12908/1-62",
"URS0001A23EB6_12908/1-64"
] | [
"GUGAUGUCGGCAAGGGUGGACGAUGCGGCCCGAGUCCUGGUAACAGGAUAAGCCGAAAGAUCAC",
"GUGAUGACGGCAAGGGUGGACGAUGCGGCCCGAAUCCU--UAACCGGAUAAGCCGGAGAAUCAC",
"GUGAUGUCGGCAAGGGUGGACGAUGCGGCCCGGAUCCUGGUUUCAGGAUAAGCCGAAGUAUCAC"
] | rfam_14_5_mafft |
URS0001A24988_1137258_1-57 | CUGGUUCCGGUUCACGUCCGAUCCGUCGCACAUCCGCGAUCGGGCGACCCGGCGACC | ..(((.((((....((((((((................))))))))..))))..))) | [
"URS0001A24988_1137258/1-57",
"URS0001A2322C_12908/1-48",
"URS0001A232EF_12908/1-41",
"URS0001A2324A_12908/1-55",
"URS0001A235DA_12908/1-53",
"URS0001A236AF_12908/1-51",
"URS0001A23D56_419479/1-48",
"URS0001A238CE_12908/1-49",
"URS0001A24362_12908/1-51",
"URS0001A23625_1121927/1-47"
] | [
"CUGGUUCCGGUUCACGU--CCGAUCCGUCGCACAUCCGCGAUCGGGCGACCCGGCGACC",
"UCGGUUCCGGUUCACGUC-GCGCAAGCCCGCG---------CUGGACGACCCGGGACU-",
"AUGGUUCCGGUUCAC----CCGCCGUCCGGC--------------GGGACCCGGCGACC",
"UUGGUUCCGGUUCACCCCGCCGACGUCGUGCCGAC----GCGUCGGGGACCCGGCGACA",
"CUGGUUCCGGUUCACGUCACGAGCGCCAUCGGCGC------AACGACGACCCGGC... | rfam_14_5_mafft |
URS0001A24997_325240_1-55 | CAUGUGGUGUCCGACUACGGGUUGGAAGAGCGACAUGGCCUUACACUUUUGAGGU | (((((.((.((((((.....))))))...)).))))).................. | [
"URS0001A24997_325240/1-55",
"URS0001A23DED_1123497/1-52",
"URS0001A24412_319224/1-54",
"URS0001A24412_327275/1-54",
"URS0001A24997_12908/1-55",
"URS0001A23612_326297/1-53",
"URS0001A24218_211586/1-51",
"URS0001A24218_1339231/1-51",
"URS0001A233C1_12908/1-55",
"URS0001A24493_392500/1-53"
] | [
"CAUGUGGUGUCCGACUACGGGUUGGAAGAGCGACAUGGCCUUACACUUUUGAGGU",
"CAUGUGGUGUCCGGCAAC-GAUCCGGAUAGCGACAUGGCCCGAU--UUUUGAGGU",
"CAUGUGGUGUCCGACUAAGGGUUGGAAGAGCGACAUGGCCUUACA-UUUUGAGGU",
"CAUGUGGUGUCCGACUAAGGGUUGGAAGAGCGACAUGGCCUUACA-UUUUGAGGU",
"CAUGUGGUGUCCGACUACGGGUUGGAAGAGCGACAUGGCCUUACACUUUUGAGGU",
"CAUGUGGUGU... | rfam_14_5_mafft |
URS0001A249A0_12908_1-66 | UCGGUUCCGGUUCACGCCAGGGGGUUCAUCCAGCCCCAUCAGUUUUGCCAUCGGCGACCCGGAGCC | ..(((.((((....((((.(.(..........................).).))))..)))).))) | [
"URS0001A249A0_12908/1-66",
"URS0001A23B6D_12908/1-62",
"URS0001A234F3_1035308/1-59"
] | [
"UCGGUUCCGGUUCACGCCAGGGGGUUCAUCCAGCCCCAUCAGUUUUGCCAUCGGCGACCCGGAGCC",
"UCGGUUCCGGUUCACGCCGCGGGGCGCAUCCAGCCCCUCAG----CAAAGAUGGCGACCCGGUGCC",
"UCGGUUCCGGUUCACGCCACGGGGUCAAUCCAGCCCCACCA-------UCCCGGCGACCCGGCCCC"
] | rfam_14_5_mafft |
URS0001A249B4_12908_1-94 | CUGAUGGCGGCGUCUGGGUGGAAAUCGGAAUCAAUCGCCCAAUUCCCCUUCGCACCGGAGAAAAGUUCCCGGUAGGGCAGCGCCUAAGUGUCAG | (((((...(((((..((((...(.(.(....).)).)))).....(((((.....(((.((.....)))))).))))..))))).....))))) | [
"URS0001A249B4_12908/1-94",
"URS0001A2345A_12908/1-94",
"URS0001A24063_12908/1-94",
"URS0001A249A8_12908/1-94",
"URS0001A23667_12908/1-94",
"URS0001A248FC_12908/1-94",
"URS0001A24128_12908/1-94",
"URS0001A243A4_12908/1-94",
"URS0001A23430_12908/1-94",
"URS0001A2366F_12908/1-94"
] | [
"CUGAUGGCGGCGUCUGGGUGGAAAUCGGAAUCAAUCGCCCAAUUCCCCUUCGCACCGGAGAAAAGUUCCCGGUAGGGCAGCGCCUAAGUGUCAG",
"CUGAUGGCGGCGUCUGGGUGGAAAUCGGAAUCAAUCGCCCUAUUCCCCUUCGCACCGGAGAAAAGUACUCGGUGGGGCAGCGCCUAAGUGUCAG",
"CUGAUGGCGGCGUAUGGGUGGAAAUCGGAAUCAAUCGCCCAAUUCCCCUUCGCACCGGAGAAAAUUAUCCGGUAGGGCAACGCCUAAACGUCAG",
"CUGAUGGCGGCGUAU... | rfam_14_5_mafft |
URS0001A249B6_1224136_1-54 | CGCGUGGUGUCUGGCGUUAGGGCUGGAAGAGCGACGCGGCCUUCAGAUUGAGGU | (((((.((.((((((......))))))...)).)))))................ | [
"URS0001A249B6_1224136/1-54",
"URS0001A246F2_29488/1-54",
"URS0001A23821_1224318/1-54",
"URS0001A23247_12908/1-53",
"URS0001A240A0_12908/1-53",
"URS0001A23AA5_12908/1-52",
"URS0001A24120_1159613/1-52",
"URS0001A2365A_413503/1-52",
"URS0001A2365A_1208664/1-52",
"URS0001A2365A_1074000/1-52"
] | [
"CGCGUGGUGUCUGGCGUUA--GGGCUGGAAGAGCGACGCGGCCUUCAGAUUGAGGU",
"CGUGUGGUGUCUGGCGGCAACAGGGCUGGAUAGCGACGCGGCCUU--AACAGAGGU",
"CGCGUGGUGUCUGGCGUUA--GGGCUGGAAGAGCGACGCGGCCUUAGACCUGAGGU",
"CGCGUGGUGUCUGGCGUAG--GGGCCGGAAGAGCGACGCGGCCUU-AUACAGAGGU",
"CACGCGGUGUCUGGCGUUA--GGGCUGGAAGAGCGGCGUGGCCUU-ACACAGAGGU",
"CGCGU... | rfam_14_5_mafft |
URS0001A249B9_12908_1-69 | UACUUUUGCAACCGUCUAAACCGAGAGUCGGUGUGGCUACAUAAAAAUUAUUUAUACAAUAUUGGCAUG | ...............(((.((.........)).)))................................. | [
"URS0001A249B9_12908/1-69",
"URS0001A2482E_12908/1-69",
"URS0001A242D0_1406840/1-63",
"URS0001A2487E_12908/1-65"
] | [
"UACUUUUGCAACCGUCUAAACCGAGAGUCGGUGUGGCUACAUAAAAAUUAUUUAUAC-AAUAUUGGCAUG",
"UAUAUUUGCACCCGCUAUUCAUAUGAGUUGA-GUGGCUACAUAAAAAUUAUUUAAUCAAAUAUUGGCAUG",
"UACCUUUGCACCCAAUCGGGAUAGGCCC-------GUUACAUAAAAAUUAUUUAAACAAAUAUUGGCAUG",
"UACCUUUGCACCCAAUCAGGAUAGACCUGA----GGUUACAUAAAAAUUAUUUAAAU-AAUAUUGGCAUG"
] | rfam_14_5_mafft |
URS0001A249C0_12908_1-68 | UGGGUUCCGGUUCACGCCGCGCCUGCCUCGUUUCGACGGGGCAGGCGGAAGACGGCGACCCGGCGACC | ..(((.((((....(((((.................................)))))..))))..))) | [
"URS0001A249C0_12908/1-68",
"URS0001A2380A_1206723/1-50",
"URS0001A23279_1206735/1-56",
"URS0001A24345_1194972/1-52"
] | [
"UGGGUUCCGGUUCACGCCGCGCCUGCCUCGUUUCGACGGGGCAGGCGGAAGACGGCGACCCGGCGACC",
"UCGGUUCCGGUUCACGCUUC----GCGCGAAUUCGC--------------GUGGGCGACCCGGCGACC",
"UCGGUUCCGGUUCACGCU-------CACGGCUCUGCUGACGC-----GGAGCGGGCGACCCGGCGACC",
"UCGGUUCCGGUUCACGCCGCAGCCUCCCGGUAC--------------GGGAAGGGCGACCCG--GACC"
] | rfam_14_5_mafft |
URS0001A249C1_12908_1-51 | GCGGGAUACGUCCCGCCGGAAUGUGGCUUAAGACCUAAGCUGAACCAUGAA | (((((......))))).((.....(((((.......)))))...))..... | [
"URS0001A249C1_12908/1-51",
"URS0001A237AE_12908/1-50",
"URS0001A24654_1094980/1-46",
"URS0001A24380_12908/1-46",
"URS0001A24146_12908/1-49",
"URS0001A23E91_1122233/1-46"
] | [
"GCGGGAUACGUCCCGCCGGAAUGUGGCUUAAGACCUAAGCUGAACCAUGAA",
"-CGGGAGUGAUCCCGCCGGAAUGUGGCUUAAGACCUAAGCUGAACCCUUGA",
"-CGGGAUGUGUCCCGUGGGAAUGUGGCUUUUG----AAGCUGAACCGUGAA",
"-CGGGAUAUGUCCCGUGGGAAUGUGGCUUUUG----AAGCUGAACCGUGAA",
"-CGGGAUCUGUCCCGUGGGAAUGUAGCUUUGAU-AUAAGCUGAACCGUGAA",
"-CGGGAGGUGUCCCGCCGGGAUGUGGCUCA... | rfam_14_5_mafft |
URS0001A249DA_12908_1-91 | CCUGUCUACGCAGGUCGGGAUGUGAUUCGCGUUCGUGGCCGACGGCCGCGAGGAGGCGGCACCGCCGCCGAAACGGGAAUUGAACCACACA | (((((....)))))..((.....(((((................................................)))))...))..... | [
"URS0001A249DA_12908/1-91",
"URS0001A23819_12908/1-82",
"URS0001A242CB_12908/1-81",
"URS0001A2374F_12908/1-80"
] | [
"CCUGUCUACGCAGGUCGGGAUGUGAUUCGCGUUCGUGGCCGACGGCCGCGAGGAGGCGGCACCGCCGCCGAAACGGGAAUUGAACCACACA",
"CCUGUACACACAGGUCGGGAUGUGACCUG----CGCGGCU-UCGGCCGCGGGGAGGCGGAUCGGCCGCCGAA----CGGUUGAACCACACG",
"CCUGUCUACACAGGUCGGAAUGUGACUCC----CGCGGG--GCGGCCGUGAGAA--CGGCCACAGCGCCGAU--GGGGGUUGAACCACACA",
"CCUGCCUGUGCAGGUCGGGAUGUG... | rfam_14_5_mafft |
URS0001A249F3_12908_1-35 | CUCUGGGUCCGACUGUUGAUCCAGGGCAGAAAGAG | ((((((((..........))))))))......... | [
"URS0001A249F3_12908/1-35",
"URS0001A244A9_1121347/1-34",
"URS0001A23FF1_1590652/1-35",
"URS0001A248EA_12908/1-34",
"URS0001A2349B_1126833/1-35",
"URS0001A236DC_1122920/1-34",
"URS0001A2326F_1122924/1-35",
"URS0001A236DC_1684143/1-34",
"URS0001A23BD0_684063/1-34",
"URS0001A24331_1243662/1-34"
] | [
"CUCUGGGUCCGACUGUUGAUCCAGGGCAGAAAGAG",
"CUCUGGAUCCGCAUGU-GGUUCAGGGCAGAAAGAG",
"CUCUGAAUCCGCCUGUUGAUUCAGGGCAGAAAGAG",
"CUCUGCGUCCGCAUGC-GAUGCAGGGCAGAAAGAG",
"CUCUGGGUCCGCCUGUUGACUCAGGGCAGAAAGAG",
"CUCUGGGUCCGCAUGC-GAUUCAGGGCAGAAAGAG",
"CUCUGGGUCCAUCAGUCGGCUCAGGGCAGAAAGAG",
"CUCUGGGUCCGCAUGC-GAUUCAGGGCA... | rfam_14_5_mafft |
URS0001A249FD_12908_1-33 | GGUUACACAACAACUUCUCUGUAAUCGCGGCAG | (((((((............)))))))....... | [
"URS0001A249FD_12908/1-33",
"URS0001A244A6_12908/1-33",
"URS0001A2351B_12908/1-33",
"URS0001A235C7_12908/1-33",
"URS0001A23337_12908/1-33",
"URS0001A23337_1123008/1-33",
"URS0001A239AD_1121099/1-31",
"URS0001A2437C_12908/1-32"
] | [
"GGUUACACAACAACUUCUCUGUAAUCGCGGCAG",
"GAUUACACUUCAACUUCUCUGUAAUCGCGGCUG",
"GAUUACAAUACAACUUCUCUGUAAUCGCGGCUG",
"GAUUACAACACAACUUCUCUGUAAUCGCGGCUG",
"GAUUACACCACAACUUCUCUGUAAUCGCGGCUG",
"GAUUACACCACAACUUCUCUGUAAUCGCGGCUG",
"GAUUACAC--CUUCUUCUCUGUAGUCGCGGCUG",
"GAUUACAC-ACAACUUCUCUGUAAUCGCGGCUG"
] | rfam_14_5_mafft |
URS0001A24A02_12908_1-68 | UAUCUUUGCACCCGCUACUCAAACGACUUGAGUACGUACAUAAAAAUUAUUUAUACAAUAUUGGCAUG | ...............(((((.........))))).................................. | [
"URS0001A24A02_12908/1-68",
"URS0001A243CA_12908/1-56",
"URS0001A2467B_12908/1-56",
"URS0001A243AA_12908/1-56",
"URS0001A248E1_12908/1-56",
"URS0001A248F1_12908/1-56"
] | [
"UAUCUUUGCACCCGCUACUCAAACGACUUGAGUACGUACAUAAAAAUUAUUUAUAC-AAUAUUGGCAUG",
"UAUAUUUGCAACUUCAAACAGGA-------------UACAUAAAAACUAUUAAAACUAAUAUUGGCAUG",
"UAUAUUUGCAACUUCAAACUGGA-------------UACAUAAAAACUAUUAAAACUAAUAUUGGCAUG",
"UAUAUUUGCAACUUUAAACUGGA-------------UACAUAAAAACUAUUAAAACUAAUAUUGGCAUG",
"UAUAUUUGCAACUUC... | rfam_14_5_mafft |
URS0001A24A04_12908_1-78 | GGGCACCUGCGGACUUCGGUCGAGGGGCCUUACAACAUGAGGCAGGGCAACCUGCCGCAAAGCAACGGAAGACAGAAA | ((((.(((...............)))))))..........((((((....))))))...................... | [
"URS0001A24A04_12908/1-78",
"URS0001A24115_12908/1-61",
"URS0001A240FC_12908/1-68",
"URS0001A231E9_571166/1-65",
"URS0001A238B9_12908/1-65",
"URS0001A23DCC_12908/1-65",
"URS0001A23D18_12908/1-62",
"URS0001A24777_12908/1-66",
"URS0001A23271_12908/1-62",
"URS0001A23214_1185766/1-68"
] | [
"GGGCACCUGCGGACUUCGGUCGAGGGGCCUU---ACAACAUGAGGCAGGGCAACCUGCCGCAAAGCAACGGAAGACAGAAA",
"GGGGACCUUCG------------GGGCC------CUGACA-ACAGCCGGCUAACCGCCCGCAAAGCAACGGAAGACAGAA-",
"GGGCACCUACG------------GGGGCCUUCAUCUAACA-GCCGGGCGCGAACCGCCCGCAAAGCAACGGAAGACAGAAA",
"GGGCACCUGCG------------GGGGCCUG---AACACA-GAGGCGGAGAAAU... | rfam_14_5_mafft |
URS0001A24A0E_12908_1-76 | CGCACAUUAUGUGCUGGCUAAGGUAAGUCCGACGUGCUUCUUCAGCACUGCUCCUUUUGGGGGGGCUUGGGAUUAC | .(((((...)))))........((((..((...(((((.....))))).(((((.......)))))...)).)))) | [
"URS0001A24A0E_12908/1-76",
"URS0001A23FDB_12908/1-74"
] | [
"CGCACAUUAUGUGCUGGCUAAGGUAAGUCCGACGUGCUUCUUCAGCACUGCUCCUUUUGGGGGGGCUUGGGAUUAC",
"UGCACAUCAUGUGCUGGCUGAGGUAAGUCCGACGUGCUCAAGUAGCACUG--CCCUGUAUGGGGGCUUGGGAUUGC"
] | rfam_14_5_mafft |
URS0001A24A14_1232219_1-75 | CCUGCGUGCGAUGUUCGCAUUGCAGGUCGGAAUGUGGCCAGCGUGGUCCAUCGGGCCACGCGGCUGAACCACCAA | (((((................)))))..((.....((((......................))))...))..... | [
"URS0001A24A14_1232219/1-75",
"URS0001A23288_1227455/1-67",
"URS0001A23BB7_1227456/1-68"
] | [
"CCUGC-GUGCGAUGUUCGCAUUGCAGGUCGGAAUGUGGCCAGCGUGGUCCAUCGGGCCACGCGGCUGAACCACCAA",
"CCUGC-GUG--------AUACUGCAGGUCGGAAUGUGGCCAGCGUGGUCCCCCGGACCACGCGGCUGAACCAUCAA",
"CCUGUGGCG--------AUACUGCAGGUCGGAAUGUGGCCAGCGUGGUCCGGUGGACCACGCGGCUGAACCAUCAA"
] | rfam_14_5_mafft |
URS0001A24A1B_12908_1-94 | CUGAUAAAGGCGUCUGGGUGGAAAUCGGAGUUGAUCGCCCAAUACCCCUAGUGUCGAAAGAGAUAUACAAGCCGGGGCAACGCCUAAAUGUCAG | (((((...(((((..((((...(.(((....)))).))))....((((..(((((......))))).......))))..))))).....))))) | [
"URS0001A24A1B_12908/1-94",
"URS0001A236D8_12908/1-94"
] | [
"CUGAUAAAGGCGUCUGGGUGGAAAUCGGAGUUGAUCGCCCAAUACCCCUAGUGUCGAAAGAGAUAUACAAGCCGGGGCAACGCCUAAAUGUCAG",
"CUGAUAAAGGCGUCUGGGUGGAAAUCGGAGUCGAUCGCCCUGUGCCCCUCGUCACAGACGAGAAAUACAAGUUGGGGCAGCGCCUGAACGUCAG"
] | rfam_14_5_mafft |
URS0001A24A2E_12908_1-31 | GAUUGUAUUAAACCUCUCGCAAUCGCGGCUG | ((((((............))))))....... | [
"URS0001A24A2E_12908/1-31",
"URS0001A23277_12908/1-31",
"URS0001A23C4D_12908/1-31",
"URS0001A23858_12908/1-31"
] | [
"GAUUGUAUUAAACCUCUCGCAAUCGCGGCUG",
"GAUUGCAUAAAUCCUCUCGCAAUCGCGGCAG",
"GAUUGUAAAUUCUUCUCUACAAUCGCGGCUG",
"GAUUGUAAUUUCUUCUCUACAAUCGCGGCUG"
] | rfam_14_5_mafft |
URS0001A24A30_12908_1-63 | UGGACACGCGAAACAAGUGCAGUUCAACACGGCUGACGCCGGUACCUGAUACGGCCGGCGCAG | (((((................)))))......(((.(((((((..........)))))))))) | [
"URS0001A24A30_12908/1-63",
"URS0001A235DF_1507734/1-50",
"URS0001A24392_1158056/1-50",
"URS0001A24392_576784/1-50",
"URS0001A24325_67256/1-57",
"URS0001A23A2E_44060/1-57"
] | [
"UGGACACGCGAAACAAGUGCAGUUCAACACG---GCUGACGCCGGUACCUGAUACGGCCGGCGCAG",
"------------ACAGGCUGGAUUUUGUUC----ACUGACACCGGUACCUGAUACGGCCGGUGCAG",
"------------ACGGGCUGGAUUUUGUUC----ACUGACACCGGUACCUGAUACGGCCGGUGCAG",
"------------ACGGGCUGGAUUUUGUUC----ACUGACACCGGUACCUGAUACGGCCGGUGCAG",
"---------CUGACAGGCGACCGCCUG... | rfam_14_5_mafft |
URS0001A24A3C_12908_1-92 | CUCGCCGCCGAGUCGAGUCCCGGUCCAUCGUGGGCCGUGGUCGAUGACUCGGGACGAGACGAGAUGUGGCCGCCUCGCGGCUGAAUCGCAAG | ((((..................................................))))..((.....(((((.....)))))...))..... | [
"URS0001A24A3C_12908/1-92",
"URS0001A24868_1227485/1-83",
"URS0001A24945_1227481/1-83"
] | [
"CUCGCCGCCGAGUCGAGUCCCGGUCCAUCGUGGGCCGUGGUCGAUGACUCGGGACGAGACGAGAUGUGGCCGCCUCGCGGCUGAAUCGCAAG",
"CUCGCCGCCGGGACCGCCGUCGGAUCGAC--------CGACGCGCGUCCCGGGACGAGACGACAUGUGGCC-CCUCGCGGCUGAAUCGCAAC",
"CUCGCCGCUGGGACCGCCGUCGGAUCGAC--------CGACGCGCGUCCCGGGACGAGACGACAUGUGGCC-CCUCGCGGCUGAAUCGCAAC"
] | rfam_14_5_mafft |
URS0001A24A44_12908_1-77 | GGGGAUGUGCUUAGAGUCCCCAGGAUGUGGCGUGUUAAUAGAGGUAUUCUGUGGCCGGAAGCCUUGGUUAGUGAAUC | ((((((.........)))))).............(((((.(((((.((((......))))))))).)))))...... | [
"URS0001A24A44_12908/1-77",
"URS0001A24145_12908/1-74"
] | [
"-GGGGAUGUGCUUAGAGUCCCCAGGAUGUGGCGUGUUAAUAGAGGUAUUCUGUGGCCGGAAGCCUUGGUUAGUGAAUC",
"AUGGGGAGUUCUUAGACCCCAUGG---AUGUCGUGUUAAUAGCCGUGCUUU-UGGCCGAGUGCGGUGGUUAGUGAAUC"
] | rfam_14_5_mafft |
URS0001A24A5A_12908_1-76 | AGAGUCACCCUUAAGGUGCUCUUUUUCUGCGUGUUAAUAGCUUUUCUCAUUGGCCUGUGAAAGCGGUUAGUGAAUC | ((((.(...........)))))...........(((((.(((.(((.((......)).)))))).)))))...... | [
"URS0001A24A5A_12908/1-76",
"URS0001A23365_12908/1-73",
"URS0001A244C4_12908/1-70",
"URS0001A233DF_12908/1-73"
] | [
"AGAGUCACCCUUAAGGUGCUCUUUUUCUGCGUGUUAAUAGCUUUUCUCAUUGGCCUGUGAAAGCGGUUAGUGAAUC",
"---GAGCCCCUUAAAAGGCUCAUUAUCUGCGUGUUAAUAGCUUUUCUCAUUGGCCUGGGAAAGUGGUUAGUGAAUC",
"-----AGCCCUUAAUGGGCUCUCUUUCUGCGUGUUAAUAGCUUUUCUC-UUGGCCUGGGAAAGCGGUUAGUGAAUC",
"--AGAGUCCGCUAAAAGACUCUGUAUCUGCGUGUUAAUAGCGUAUCCU-AUGGCCUGGGAACGUGGUUA... | rfam_14_5_mafft |
URS0001A24A6E_12908_1-80 | GAUAUGCGAUGAUGCAGAAGGUGGCCGCCCCUUGAGGCGGGGAAUUUCUGCGGAGUAUGUCCGAUUUACAAACCGGGCGA | .............(((..(((...(((((......)))))....))).)))......((((((..........)))))). | [
"URS0001A24A6E_12908/1-80",
"URS0001A2401D_12908/1-77",
"URS0001A248DB_12908/1-74"
] | [
"GAUAUGCGAUGAUGCAGAAGGUGGCCGCCCCUUGAGGCGGGGAAUUUCUGCGGAGUAUGUCCGAUUUACAAACCGGGCGA",
"---AUGCGAUGAUGCAGAAGGUGGCCGUCCUUUGAGACGGGGAAUUUCUGCGGAGUAUGUCCGAUUUUAAAACCGGGCGA",
"GAUAUGCGAAGAAGCGGGAGGUUGCGACAGUUAG----UCGGUUUUUCCGUGGAGUAUGUCCGAUUUU-AAACCGGGCG-"
] | rfam_14_5_mafft |
URS0001A24A71_12908_1-31 | GAUUACAAUUUCCUUUCUGUAAUCGCGGCUG | (((((((..........)))))))....... | [
"URS0001A24A71_12908/1-31",
"URS0001A24395_12908/1-29",
"URS0001A23DEF_12908/1-31",
"URS0001A241C3_679937/1-31"
] | [
"GAUUACAAUUUCCUUUCUGUAAUCGCGGCUG",
"GAUGCCA--CUCCUUUCCGUAAUCGCGGCUG",
"GAUUGCAUUUCCUUUCUGUAAUUCGCGGCUG",
"GAUUACAUCUUCUUCUCUGUAAUCGCGGCUG"
] | rfam_14_5_mafft |
URS0001A24A79_12908_1-77 | GGGAAUACGCUUAGGAUUCUCAUAGCGUGGUCGUGUUAAUAGUUCUUCUUUUGGCCGAGGAGAGCGGUUAGUGAAUC | ((((((.........))))))..............(((((.(((((((((......))))))))).)))))...... | [
"URS0001A24A79_12908/1-77",
"URS0001A24A79_1115809/1-77",
"URS0001A24A79_1122980/1-77",
"URS0001A23C3D_12908/1-77"
] | [
"GGGAAUACGCUUAGGAUUCUCAUAGCGUGGUCGUGUUAAUAGUUCUUCUUUUGGCCGAGGAGAGCGGUUAGUGAAUC",
"GGGAAUACGCUUAGGAUUCUCAUAGCGUGGUCGUGUUAAUAGUUCUUCUUUUGGCCGAGGAGAGCGGUUAGUGAAUC",
"GGGAAUACGCUUAGGAUUCUCAUAGCGUGGUCGUGUUAAUAGUUCUUCUUUUGGCCGAGGAGAGCGGUUAGUGAAUC",
"GGGAAUACGCUUAGGAUUCUCAUAGCGCGGUCGUGUUAAUAGCUUUUCUUUUGGCCGAGAAGAGCG... | rfam_14_5_mafft |
URS0001A24A85_12908_1-82 | CUGAUCGAGACGUUGGGCCAACGCCAGUGCAGCGCGCCCGGUUCCAGAGAAGAAUAUCUCUCCGGAAACGUCGAAGAGUCAG | (((((...(((((.((((...(((.......))).))))..((((.((((........)))).))))))))).....))))) | [
"URS0001A24A85_12908/1-82",
"URS0001A23F03_12908/1-79",
"URS0001A24A94_12908/1-79",
"URS0001A2422E_12908/1-79",
"URS0001A23BE2_12908/1-80",
"URS0001A23B65_12908/1-79",
"URS0001A249C4_12908/1-79",
"URS0001A242E9_12908/1-79",
"URS0001A2476D_12908/1-80",
"URS0001A23843_12908/1-79"
] | [
"CUGAUCGAGACGUUGGGCCAACGCCAGUGCAGCGCGCCCGGUUCCAGAGAAGAAUAUCUCUCCGGAAACGUCGAAGAGUCAG",
"CUGAUCGAGACGAUGGGCCAACGCCAGUGCAGCGCGCCCGGUUCCGG--GAACACUCUUU-CCGGAAACGUCGGAGAAUCAG",
"CUGAUCGAGACGCUGGGCCAACGCCUGUGCAGCGUGCCCGAUUCCAG--GAGAACGUUGC-CUGGGAGCGUCGAAGAAUCAG",
"CUGAUCGAGACGCUGGGCCAACGCCAGUGCAGCGCGCCCGGUUCCGG--GG... | rfam_14_5_mafft |
URS0001A24A87_1628856_1-26 | UCCGUUGCUGGGUCGCCUGUAGCGGA | ((((((((.((....)).)))))))) | [
"URS0001A24A87_1628856/1-26",
"URS0001A238F5_1121018/1-26",
"URS0001A238CA_1214065/1-25",
"URS0001A23899_1223569/1-26",
"URS0001A23899_1225785/1-26",
"URS0001A23AC1_1336237/1-26",
"URS0001A23AC1_1005995/1-26",
"URS0001A23AC1_480813/1-26",
"URS0001A23899_1224149/1-26",
"URS0001A24282_1216966/1-26"
... | [
"UCCGUUGCUGGGUCGCCUGUAGCGGA",
"UCUGCUACUGGGUCGCCUGUCGCAGA",
"-CCGCUGCUGGGUCGCCUGUAGCGGU",
"CCUGUUGCUGGGUCGCCUGUAACAGG",
"CCUGUUGCUGGGUCGCCUGUAACAGG",
"UCUGUUGCUGGGUCGCCUGUAACAGA",
"UCUGUUGCUGGGUCGCCUGUAACAGA",
"UCUGUUGCUGGGUCGCCUGUAACAGA",
"CCUGUUGCUGGGUCGCCUGUAACAGG",
"UCUGCUGCUGGGUCGCCUGUGGCGGA"... | rfam_14_5_mafft |
URS0001A24A98_12908_1-28 | UAACCUCUGGCGAUGUUCGUGAACGUUG | ((((...(.((((...))))..).)))) | [
"URS0001A24A98_12908/1-28",
"URS0001A24699_12908/1-28",
"URS0001A23776_12908/1-28",
"URS0001A23358_12908/1-28",
"URS0001A2353F_12908/1-28",
"URS0001A243B7_12908/1-28",
"URS0001A23ADB_12908/1-28",
"URS0001A23351_12908/1-28",
"URS0001A248BD_12908/1-28",
"URS0001A23930_12908/1-28"
] | [
"UAACCUCUGGCGAUGUUCGUGAACGUUG",
"UAACCUCUGGCGAUGUCCGUGAAUGUUA",
"CAACCUCUGGCAAGAGAUGUUAACGUUG",
"CAACCUCUGGCGAUGUACGUGUAUGUUG",
"CAACCUCUGGCGAGCAUCGUGAACGUUG",
"CAACCUCUGGCGAAGUUCGCGAAUGUUG",
"CAACCUCUGGCGAGGGACGUGAAUGUUG",
"UAACCUCUGGCGAGGGACGUGAAUGUUG",
"UAACCUCUGGCGAGGGACGUGUAUGUUG",
"UAACCUCUG... | rfam_14_5_mafft |
URS0001A24AD5_12908_1-75 | CUGGGAACAGCACAGCCGCAUAUCCGACUUCGUCGCGCAGGCCUCGCGCCUCGCGGCUUGGGAGUGCGGACGUGC | .........((((..((((((..((......((((((..............))))))...)).))))))..)))) | [
"URS0001A24AD5_12908/1-75",
"URS0001A23DAF_12908/1-66",
"URS0001A244BE_12908/1-71",
"URS0001A248C4_12908/1-71",
"URS0001A248C4_1230455/1-71",
"URS0001A248C4_1194088/1-71",
"URS0001A248C4_1227468/1-71",
"URS0001A248C4_1227483/1-71",
"URS0001A23907_1498500/1-71",
"URS0001A24703_12908/1-72"
] | [
"CUGGGAACAGCACAGCCGCAUAUCCGACUUCGUCGCG-CAGGCCUCGCGCCU-CGCGGCUUGGGAGUGCGGACGUGC",
"AUGGGAACAGCACAGCCGCAUAUCCGACCU-----------GCCGCCCGUUCGGGUGGCUUGGGAGUGCGGCGGUGC",
"ACGGGAACAGCACAGCUGCAGAUCCGACUC----GCC-GGGGCCUCUUCGCC-CGCGGCUUGGGAAUGUAGCAGUGC",
"ACGGGAACAGCACAGCUGCAGAUCCGACUC----GCC-GGGGCCCUUUCGCC-CGCGGCUUGGGAA... | rfam_14_5_mafft |
URS0001A24AD7_12908_1-77 | GGGGAAAACACUUAGAAUCCCCGUGGACUAGAGUGUGAAUAGCAACGUCUUUGGCCGGACGUCGUGGUUCGGGAAUC | (((((............))))).............(((((.((.((((((......)))))).)).)))))...... | [
"URS0001A24AD7_12908/1-77",
"URS0001A2340A_12908/1-76",
"URS0001A235A0_12908/1-77",
"URS0001A23ED7_12908/1-75",
"URS0001A2424C_12908/1-76",
"URS0001A2370A_12908/1-77",
"URS0001A23919_12908/1-76",
"URS0001A23A81_12908/1-76",
"URS0001A24062_12908/1-76",
"URS0001A237AF_12908/1-76"
] | [
"GGGGAAAACACUUAGAAUCCCCG-UGGACUAGAGUGUGAAUAGCAACGUCUU-UGGCCGGACGUCGUGGUUCGGGAAUC",
"-GGGGAAACUCUUAGAAUCCCCG-UGAACAGGGGUGUGAAUAGCGGCGUCUU-UGGCCGGGCGAAGCGGUUCGUGAAUC",
"-GGGGAUACACUUAGAGUCCCCU-GGAUAGCGUGUGUUAAUAGCAACGUCCUGUGGCCGGGAUUUGCGGUUAGUGAAUC",
"-GGGGAGAGACUUAGAAUCCCCG-UGAGCC-GCGUGUGAAUAGCGGUGUCUU-UGGCCGG... | rfam_14_5_mafft |
URS0001A24ADC_12908_1-53 | CGGGAAUGCGCCCGCAGGGAUGUGACUGCGAAAAAAAGCAGUUGAACCAUAAA | ((((......))))..((.....(((((..........)))))...))..... | [
"URS0001A24ADC_12908/1-53",
"URS0001A23EC9_12908/1-52"
] | [
"CGGGAAUGCGCCCGCAGGGAUGUGACUGCGAAAAAAAGCAGUUGAACCAUAAA",
"CGGGAAUGCGCCCGCAGGGAUGUGACUGCG-AAAAAGGCAGUUGAACCAUAAA"
] | rfam_14_5_mafft |
URS0001A24ADF_12908_1-74 | GGGGACCUGUCACAGGGGCCCUAUAAACCACCGGCGGGCAAAUUCCCGUCGGCCAAGCAAACGGAAGACAGAAA | ((((.(((.......)))))))........(.(..(((......))).).)....................... | [
"URS0001A24ADF_12908/1-74",
"URS0001A24264_12908/1-64",
"URS0001A2344E_12908/1-64",
"URS0001A246D8_12908/1-67",
"URS0001A23CF4_366616/1-72",
"URS0001A2416F_12908/1-70",
"URS0001A23EE7_12908/1-66",
"URS0001A23D2E_12908/1-66",
"URS0001A23EDA_12908/1-66",
"URS0001A238EA_1294273/1-62"
] | [
"GGGGACCUGUCACAGGGGCCCUAUAAACCACCGGCGGGCAAAUUCCCGUCGGC---CAAGCAAACGGAAGACAGAAA",
"GGGGAGCUUC----GGCGCCCUAUA-CCCGCGGGUGGCAACACCCG--------UGCAAGCAAACGGAAGACAGAGA",
"GGGGAUCUUC----GGAGCCCUUCA-CCGCCGGGUGGCGACACCCG--------UGCAAGCAAACGGAAGACAGGAA",
"GGGGACCUUU----GGGGCCCUAUA---CACCAGCGGUCUUAAUCGGCCGCGC---UAAGCAAACG... | rfam_14_5_mafft |
URS0001A24AEB_1401073_1-76 | GGGGAAUUUUCUUAGAACCCCAUACGAUACGUGUUAAUAGUGUUGUCUUUGGCCGGGCAGCAUGGUUAGGUCAAGC | ((((.............))))............(((((.(((((((((......))))))))).)))))....... | [
"URS0001A24AEB_1401073/1-76",
"URS0001A23653_28125/1-74",
"URS0001A248DE_1122993/1-74",
"URS0001A23D54_649761/1-74",
"URS0001A23F78_12908/1-74",
"URS0001A247E2_12908/1-75",
"URS0001A232AA_12908/1-75",
"URS0001A23567_1236518/1-75",
"URS0001A23567_12908/1-75",
"URS0001A2470A_1227276/1-75"
] | [
"GGGGAAUUUUCUUAGAACCCCAUACGAUACGUGUUAAUAGUGUUGUCUUUGGCCGGGCAGCAUGGUUAGGUCAAGC",
"--GGGAUUUUCUUAGAAUCCCAUACGUUACGUGUUAAUAACAUAGUCUUUGGCCGGGCUAUGUGGUUAGGAAAAGC",
"--GGGGUACUCUUAGAGCCCCAUACGAUGCAUGUUAAUAGUGUUGUCUUUGGCCGGGCGACAUGGUUAGGUAAGGC",
"--GGGGUACUCUUAGAGCCCCAUACGAUACAUGUUAAUAGUGUUGUCUUUGGCCGGGCGACAUGGUUAG... | rfam_14_5_mafft |
URS0001A24AF8_987045_1-48 | UUGGUUCCGGUUCACGGUUCGGCACCCUGCCGCACCGACCCGGCGGCC | ..(((.((((....((((.(((.......))).))))..))))..))) | [
"URS0001A24AF8_987045/1-48",
"URS0001A2493C_12908/1-42",
"URS0001A236E2_12908/1-39",
"URS0001A247E4_12908/1-39",
"URS0001A23406_12908/1-39",
"URS0001A23B53_1120935/1-39"
] | [
"UUGGUUCCGGUUCACGGUUCGGCACCCUGCCGCACCGACCCGGCGGCC",
"UUGGCUCCGGUUCACGACGCGU------GACCAGUCGACCCGGCGGCC",
"CCGGCACCGGUUCCCGUGCAC---------CCACACGACCCGGCGGCC",
"UCGGCUCCGGUUCACGUGCGC---------GAGCACGACCCGGCGGCC",
"CCGGCUCCGGUUCACGUCGCG---------CGCGGCGACCCGGCGGCC",
"CCGGCUCCGGUUCACCCCGAC---------CCAGGGGACCCGGCG... | rfam_14_5_mafft |
URS0001A24B0C_12908_1-60 | GAAAGGCUGCCAUAUUUCGCCAUCCGGCAGCUGGGUGCAUACCGAGACACCCCAAUUAGG | ....(((((((..............)))))))(((((..........)))))........ | [
"URS0001A24B0C_12908/1-60",
"URS0001A23289_12908/1-48",
"URS0001A233CC_12908/1-56",
"URS0001A23363_12908/1-52",
"URS0001A236A8_12908/1-57",
"URS0001A23940_12908/1-57",
"URS0001A238F8_12908/1-57",
"URS0001A238F8_1226324/1-57",
"URS0001A23DB0_12908/1-57",
"URS0001A23DB0_1121115/1-57"
] | [
"GAAAGGCUGCCAUAUUUCGCCAUCCGGCAGCUGGGUG-CAUACCGAGACACCCCAAUUAGG",
"GAAAGGCGGCCGU----------AAGGCAGCUGGGUGUCUAUGC---ACACCCCAAUUAGA",
"GAAAGGCCGUCAA--AUCGCCG-GUGACGGCUGGGUG--UGACCGAGACACCCCAGUUAGG",
"GAAAGGCUGCAU---UUC-----CAUGCAGCUGGGCAUACUGGU-CUAUGCCCCAGUUAGA",
"GAAAGGUCGCUU---UUCGCCA-AAGGCGGCUGGGUGUUUUACCGAG... | rfam_14_5_mafft |
URS0001A24B1A_12908_1-81 | GGGAGUGCAUCUUAGAGCUUCCGCAGCCGUGAGGUGUUAAUAGUCUGUCUCAUUUGGCCGAGACACGACGGUUAGUGAAUC | ((((((..........))))))..............(((((.(((.((.((..........)).))))).)))))...... | [
"URS0001A24B1A_12908/1-81",
"URS0001A24298_12908/1-81",
"URS0001A231D7_12908/1-81",
"URS0001A23755_12908/1-74",
"URS0001A2375D_12908/1-75",
"URS0001A239FA_12908/1-75",
"URS0001A23B31_12908/1-76",
"URS0001A2324C_1392486/1-76",
"URS0001A24AA1_12908/1-76",
"URS0001A23FB6_12908/1-75"
] | [
"GGGAGUGCAUCUUAGAGCUUCCGCAGCCGUGAGGUGUUAAUAGUCUGUCUCAUUUGGCCGAGACACGACGGUUAGUGAAUC",
"GGGAGUGUGUCUUAGAGCUUCCGCAGCCGUGAGGUGUUAAUAGUCUGUCUCAUUUGGCCGAGACACGACGGUUAGUGAAUC",
"GGGAGUGUGUCUUAGAGCUUCCACAGCCGUGAGGUGUUAAUAGUCUGUCUCAUUUGGCCGAGACACGACGGUUAGUGAAUC",
"-GGGGGAAGGCUUAGAGCCCCCAGCCCG--GGAGUGUUAAUAGUGC--UGC-AU... | rfam_14_5_mafft |
URS0001A24B1D_12908_1-83 | CGCCGUGAACUGAGGGGUCCUGUCUCCCCCUUCAGAUCCGGUUGCGGGCCAUUCUGCCCGCCGACAUCAUAAGUGAGAAGGAG | ..(((.((.((((((((..........)))))))).)))))..(((((........)))))...................... | [
"URS0001A24B1D_12908/1-83",
"URS0001A2328A_12908/1-77",
"URS0001A2354A_12908/1-76",
"URS0001A23AF8_338963/1-76",
"URS0001A23754_12908/1-75"
] | [
"CGCCGUGAACUGAGGGGUCCUGUCUCCCCCUUCAGAUCCGGUUGCGGGCCAUUCUGCCCGCCGACAU-CAUAAGUGAGAAGGAG",
"GUCCGUGAACUGAGGGGAAAUGUCUCCCCCUUCAGAUCCGGCGGCGGGAUGUCCCGCCCAU---UACACGCAAGAAGGAG----",
"GUCCGUGAACUGAGGGGAAAUGUCUCCCCCUUCAGAUCCGGCAGCGGGUAAUCCCGCUUAU---UAU-CGCAAGAAGGAG----",
"GACCGUGAACUGAGGGGAAAUGUCUCCCCCUUCAGAUCCGGCAGC... | rfam_14_5_mafft |
URS0001A24B28_73044_1-48 | UCGGCUCCGGUUCACGCACCCGCAUUCCCGCGGUGGCGACCCGGCGCC | ..(((.((((....(((..(((........)))..)))..)))).))) | [
"URS0001A24B28_73044/1-48",
"URS0001A23F85_12908/1-47",
"URS0001A24008_12908/1-46",
"URS0001A23D1D_12908/1-45",
"URS0001A23B11_12908/1-39",
"URS0001A236FE_12908/1-47",
"URS0001A245DB_29306/1-48",
"URS0001A23D52_700597/1-47",
"URS0001A23B60_12908/1-47",
"URS0001A23B60_1463917/1-47"
] | [
"UCGGCUCCGGUUCACGCAC-CCGCAUUCCCGCGGUGGCGACCCGGCGCC",
"GUGGCUCCGGUUCACGGCC--AGCACCCCGCUGAGGCCGACCCGGAGCC",
"CUGGCUCCGGUUCACGUCC--CGCA-CCCGCGAGUGACGACCCGGCGCC",
"CUGGCUCCGGUUCACGGCA--CGCA--UCGGGUGUGCCGACCCGGCGCC",
"-CCGGUCCGGUUCACGUGCCUCGCG---------GCACGACCCGGCGCC",
"CCGGCUCCGGUUCACGCCC-CAGCA-UCCGUUGCGGACGA... | rfam_14_5_mafft |
URS0001A24B35_1121370_1-86 | ACUCAGGCACGAUCUGCGCCUUAUAUAUACGCACCAAUCAAGCGUUAUCUGCGCGCCGAACCGACCUGAAGUUCAAUCCUGAGGGA | (((((((.....((.((((.........((((.........)))).......)))).)).....)))).))).............. | [
"URS0001A24B35_1121370/1-86",
"URS0001A24ABF_196627/1-56"
] | [
"ACUCAGGCACGAUCUGCGCCUUAUAUAUACGCACCAAUCAAGCGUUAUCUGCGCGCCGAACCGACCUGAAG-UUCAAUCCUGAGGGA",
"ACUCGGGCACGAUCUG-------------------------GCAUCCGCUG------GAACCGACCUGAAGUUUCAAUCCUGAGGGA"
] | rfam_14_5_mafft |
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