id
stringlengths
12
30
sequence
stringlengths
12
4.38k
secondary_structure
stringlengths
12
4.38k
aligned_ids
listlengths
1
10
aligned_sequences
listlengths
1
10
split
stringclasses
4 values
URS0000D68EFC_12908_1-81
GCUUUCAACAUCCCCGUCUCAGAGGCGAAUUGACGGUAUCGGCACCAGGCCGAUGGCAGACGACCUCAUGAGACUGAAGGC
(((((((........((((((.(((....(((............................))))))..)))))))))))))
[ "URS0000D68EFC_12908/1-81", "URS0000D670CB_12908/1-80", "URS0000D6B61E_12908/1-79", "URS0000D6796B_12908/1-80", "URS0000D68D47_12908/1-79", "URS0000D69F3D_12908/1-80", "URS0000D6AC2B_12908/1-77", "URS0000D66C6E_1267534/1-80", "URS0000D68AE2_12908/1-81", "URS0000D6830B_12908/1-79" ]
[ "GCUUUCAACAUCCCCGUCUCAGAGGCG-AAUUGACGGUAUCGGCACCAGGCCGAUGGCAGACGACC-UCAUGAGACUGAAGGC", "GCUUUCAACAUCCCCGUCUCAGAGGCGCGAUCGGCGGUCUCGGC--AUCGCCGACUCCAAACGACC-UCAUGAGACUGAAGGC", "GCUUUCAACAUCCCCGUCUCAGAGGCG--CAGGACGGCAUAGGC-GUUGGCCGAUGCUUAACGACC-UCGAGAGACUGAAGGC", "GCUUUCAACAUCCCCGUCUCGGAGGCG-AAAAGACGGUUUCGGC-GUG...
rfam_14_5_mafft
URS0000D68F09_12908_1-74
ACUGUGGAGUGUACCAGAACUUGUGAGUAGAUACAGCUCCGGCUGGUCAAAAGCAUACACGUUUGAAACAGUAA
(((((...(((((........(((.....(((.((........)))))....)))))))).......)))))..
[ "URS0000D68F09_12908/1-74", "URS0000D68F09_1262757/1-74", "URS0000D6A460_12908/1-73", "URS0000D670F2_12908/1-73", "URS0000D664ED_12908/1-73", "URS0000D6A289_12908/1-73", "URS0000D6AAD9_12908/1-73", "URS0000D6683B_12908/1-66", "URS0000D66FC5_12908/1-73", "URS0000D69882_1280696/1-73" ]
[ "ACUGUGGAGUGUACCAGAACUUGUGAGUAG-AUACAGCUCCGGCUGGUCAAAAGCAUACACGUUUGAAACAGUAA", "ACUGUGGAGUGUACCAGAACUUGUGAGUAG-AUACAGCUCCGGCUGGUCAAAAGCAUACACGUUUGAAACAGUAA", "ACUGUGGAGUGUACCAGAACUUGUGAGUAG-AUACAGCUCCGGCUGGUCAAAAGCAUACACGUUU-AAACAGUAA", "ACUAUGAAGUGUACAAGAACUUGUGAGUAG-AUAUGAUUUCGGUAAAUCAAAAGCAUACACGAUG-AAAUAG...
rfam_14_5_mafft
URS0000D68F0A_12908_1-117
AAGCAAUGAAAUGCCGUGCCUGUCAAGAGGUGACUGCAUGGAGCUUCUCACAGGGGGUUGCACAGAUUCCACAACUUGACUGAGGCAGCAUCCUGCUGUUGAAAGAAAAUGUGCUGC
((((......((((.(((((..[[[[..))).)).))))...)))).............(((.............]]]]....(((((....)))))..............)))...
[ "URS0000D68F0A_12908/1-117", "URS0000D68E56_12908/1-114" ]
[ "AAGCAAUGAAAUGCCGUGCCUGUCAAGAGGUGACUGCAUGGAGCUUCUCACAGGGGGUUGCACAGAUUCCACAACUUGACUGAGGCAGCAUCCUGCUGUUGAAAGAAAAUGUGCUGC", "AAGCGUUGAACUGUAGUGCCGGUCAAGCGGUGACGACAGGGAGCUUCUCUUAGGGGGUUGCACAGAUUCCACGACUUGACUCAGGCGGUG---UGCCGCUGAAAGAAAAUGUGCUGC" ]
rfam_14_5_mafft
URS0000D68F0E_12908_1-80
AUAACAAGUUACCAGCGACAAAUUCCCAGGCUGGGAAAAGUCAUAUACCAUAUGGUAUAUGACUAGCUGACUAACUGACC
......((((..((((......((((.......)))).(((((((............))))))).))))...))))....
[ "URS0000D68F0E_12908/1-80", "URS0000D69F4A_12908/1-74", "URS0000D65E5F_12908/1-68" ]
[ "AUAACAAGUUACCAGCGACAAAUUCCCAGGCUGGGAAAAGUCAUAUACCAUAUGGUAUAUGACUAGCUGACUAACUGACC", "AUAACAAGUUACCAGUGACAAAUUCCCAGGAUGGGAAAAGCCCGCAGUAAUG------CAGACUAGCUGACUAACUGACC", "AUAACAAGUUACCAGUGACAAAUUCCCAGGUUGGGAAAAGCUUUAAA------------AAGCUAACUGAUUAACUGACC" ]
rfam_14_5_mafft
URS0000D68F13_12908_1-99
GUCAGUCCCGUAGGGAGAAGGUCAUCCACAGGUAAGACCGUCCAAAAGGGCGGCGCCUUCUCCCUCCUGCCAAAAGGGCAGGCUUGCGGGAAAGGAGGU
.....(((((((((((((((((.............(.(((((......)))))))))))))))..(((((.......))))).))))))))........
[ "URS0000D68F13_12908/1-99", "URS0000D65E01_12908/1-96", "URS0000D6CF6F_12908/1-98", "URS0000D65A35_12908/1-96", "URS0000D6CBA4_12908/1-93" ]
[ "----GUCAGUCCCGUAGGGAGAA-GGUCAUCCACAGGUAAGACCGUCCAAAAGGGCGGCGCCUUCUCCCUCCUGCCAAAAGGGCAGGCUUGCGGGAAAGGAGGU", "----GUCAGUCCCGUAGGGAAGAUGGCCGUCCAA-GGUAAGAGCGGCC-AUAGGCCGCCGCCAUCUUCCUCC-GCU-AAAAGGCGGAAUUACGGGACAGGAGGU", "----GUUAGUCCCGCAGGGAGAA-GGUCAUCCACAGGUAAGACCGUCCAAGAGGGCGGCGCCUUUUCCCUUCUGCC-GAAGGGCAGAGUUGCGGG...
rfam_14_5_mafft
URS0000D68F15_12908_1-103
GAUUGUUAAGAUCACGGUUUUAACAACAUGGUUUGAACAAAGUUCAAGAGAGUUUAAUUCUUUCAGCAGCAAUGAAUUGCAAACUGUAAACACAUAAACAAUG
..((((((((((....)))))))))).....................................(((.................))).................
[ "URS0000D68F15_12908/1-103", "URS0000D6C9E1_12908/1-96", "URS0000D6C33A_12908/1-102", "URS0000D674E8_12908/1-93", "URS0000D6781E_12908/1-94", "URS0000D6BBB4_12908/1-90", "URS0000D6AD7A_12908/1-103", "URS0000D6B6A9_12908/1-89" ]
[ "GAUUGUUAAGAUCACGGUUUUAACAACAUGGUUUGAAC-AAAGUUCAAGAGAGUUUAAUUCUUUCAGCAGCAAUGAAUUGCAAACUGUAAACACAUAAACAAUG", "GAUUGCUAAGAUUAAGGUUUUAGCAACAAGGCUUGAAU---AAUUCAAGAGAGUUUAAUUCCUUCACU-----UAGUUUAAAAAGUGUAAACACAUAAACAAUG", "GAUUGUCAAGAUUAAGGUUUUGACGACAUAGCUUGAAUAAAAGUUCAAGAGAGUUCAAUCCUUUCAGCAGCUUUG--AUGCAAACUGUAAACACA...
rfam_14_5_mafft
URS0000D68F1B_12908_1-104
AUCGAAGUACGGCGGGCGCGCCGUACAUACAGCCGCCAUGGCAUCUGCGGAUAUAGCCGGAAUACAGGAUGACCGAUCCGUAAGCCGCAGAGUAAGUCCCCCAG
......(((((((......))))))).................(((((((.......(((.................)))....))))))).............
[ "URS0000D68F1B_12908/1-104", "URS0000D67120_12908/1-104" ]
[ "AUCGAAGUACGGCGGGCGCGCCGUACAUACAGCCGCCAUGGCAUCUGCGGAUAUAGCCGGAAUACAGGAUGACCGAUCCGUAAGCCGCAGAGUAAGUCCCCCAG", "AGCGAAGUACGGCGGGCACGCCGUACGUACAGCCGCCAUGGCAGUAUCGGAUAUAGCCGGAGUACAGGAUGACCGCCCCGUAAGCCGUUACGUAAGGCCCGUAA" ]
rfam_14_5_mafft
URS0000D68F1C_12908_1-85
UGAAUAUGCCCUUAAGAGAAACAGAUGAAGCAGAUCUGAGCGGAAUCUGGAGGUUGAAAAGCGGAUGCAAUUUCCGGCAUAUUCA
((((((((((...........(((((..................)))))...(((....)))(((.......)))))))))))))
[ "URS0000D68F1C_12908/1-85", "URS0000D6C575_12908/1-76", "URS0000D6C474_12908/1-76", "URS0000D69AC1_12908/1-85", "URS0000D69CBA_12908/1-85", "URS0000D6A484_12908/1-85", "URS0000D67C3B_12908/1-76" ]
[ "UGAAUAUGCCCUUAAGAGAAACAGAUGAAGCAGAUCUGAGCGGAAUCUGGAGGUUGAAAAGCGGAUGCAAUUUCCGGCAUAUUCA", "UGAAUAUGUCCUUAAUAGAAA---------CAGAUUUGAGCGGAAUCUGGAGGUUGAAAAGCGGGUGCAAUUUCCGACAUAUUCA", "UGAAUAUGUCCUUAAUAGAAA---------CAGAUUUGAGCGGAAUCUGGAGGUUGAAAAGCGGGUGCAAUUUCCGGCAUAUUCA", "CGAAUAUGCCCUUAAGAGAAACAGAUGAAGCAGAUUUGAGCG...
rfam_14_5_mafft
URS0000D68F31_12908_1-127
ACAAUGAUACUCCCUUAUAGCUAAACGAAGCUCCGUUUUUUCCGGGGUUUCCAAGUCCGAGCGUUAAAAGCGUCACAGGCAAUAGGUAGGGCCGCGUGAGAACCACGCGGGGGUGAAAUUCCCGUGG
............(((((.....................................................................)))))(((.(((.....))).)))(((.......)))....
[ "URS0000D68F31_12908/1-127", "URS0000D691D2_12908/1-125", "URS0000D6651A_12908/1-127", "URS0000D66BDC_12908/1-127", "URS0000D6630E_12908/1-127", "URS0000D68F5D_12908/1-127", "URS0000D6B14D_12908/1-127", "URS0000D681A7_12908/1-127", "URS0000D6791B_12908/1-127", "URS0000D6B00A_12908/1-127" ]
[ "ACAAUGAUACUCCCUUAUAGCUAAACGAAGCUCCGUUUUUUCCGGGGUUUCCAAGUCCGAGCGUUAAAAGCGUCACAGGCAAUAGGUAGGGCCGCGUGAGAACCACGCGGGGGUGAAAUUCCCGUGG", "ACAAUGAUACUCCCUUAUAGCUAAACGAGGCCCCAU--GUUGGGGUGCUUCCAAGUCCGAGCGUUAAAAGCGUCGCAGGCAAUAGGUAGGGCCGCGUGAGAACCACGCGGGGGUGAGAUUCCCGUGG", "ACAAUGAUACUCCCUUAUAGCUAAACGAAGCUCCGUUUUUUCCGGGGUU...
rfam_14_5_mafft
URS0000D68F3A_1332070_1-155
UCGACUCGGUAACGAUGGCAACAUUAGCGAAAGCUGAUGGAUGGAGGUGACCUGGCAGUAGUCAGGUACCGGCGAAAGCCGCAAGCAGCUCAGCGAGCUGUGGAUACCUCACAAGAACUCAACAUUUUGCCACUCCGACGCACAGUUAUCAGUCG
.((((..((((((.....((.((((..........))))..))((((...(((((......)))))...................((((((...)))))...)...))))..................................)))))).))))
[ "URS0000D68F3A_1332070/1-155", "URS0000D67DBE_349965/1-155", "URS0000D69A80_12908/1-155" ]
[ "UCGACUCGGUAACGAUGGCAACAUUAGCGAAAGCUGAUGGAUGGAGGUGACCUGGCAGUAGUCAGGUACCGGCGAAAGCCGCAAGCAGCUCAGCGAGCUGUGGAUACCUCACAAGAACUCAACAUUUUGCCACUCCGACGCACAGUUAUCAGUCG", "UCGACUCGGUAACGAUGGCAGCGUCAGUGAAAGCUGACGGAUGGAGGUGACCUGGCAAUUGUCAGGAACCGGUGCAAACCGCAAGCAGCUCAGCGAGCUGUGGAUACCUCAUAAGAACUUAACAUUUUGCCACCCCGAUGUGCAGUUAUCAGUC...
rfam_14_5_mafft
URS0000D68F3D_12908_1-122
GGCCUAAACUGUACGAAUUGUACGGCAUGGUCUAAAAACGGUUCAACGUAGAAAGCUCCUAGUCAGAGCACGUUGAACCGUCAUAUCUCGAAAGGGGUAUGGGUGGCCCGCAAGGGUCCAUC
((((....((((((.....))))))...))))......(((((((((((.....((((.......))))))))))))))).((((((((....))))))))((((((........).)))))
[ "URS0000D68F3D_12908/1-122", "URS0000D6CFEE_12908/1-119", "URS0000D6D40B_12908/1-118", "URS0000D68123_12908/1-121" ]
[ "GGCCUAAACUGUACGAAUU----GUACGGCAUGGUCUAAAAACGGUUCAACGUAGAAAGCUCCUAGUCAGAG--CACGUUGAACCGUCAUAUCUCGAAAGGGGUAUGGGUGGCCCGCAAGGGUCCAUC", "AGCCUAAACCAUCUGAAUUCCUCAGAUGGCAUGGUUCGAAAACGGUUCAACGUAGAGAGCUCCUAGUCAGAG--CACGUUGAACCGUCAUGUCGAGAAAUCGGCAUG---GGCCCGCAAGGGUC----", "GACCUAAACCGUUCGAGCA--AUCGGCGGCAUGGUUCCAAAACGUUU...
rfam_14_5_mafft
URS0000D68F48_12908_1-66
AGCCCGCUUUCCGAACUGUCACCGUAUGGUGCGCGUGCCCGUGAGGGCUAGGACUGCGGGCAUAUU
.((((((..(((.......((((....)))).....((((....))))..)))..)))))).....
[ "URS0000D68F48_12908/1-66", "URS0000D6AC71_12908/1-65", "URS0000D6B569_12908/1-65" ]
[ "AGCCCGCUU-UCCGAACUGUCACCGUAUGGUGCGCGUGCCCGUGAGGGCUAGGACUGCGGGCAUAUU", "-GCCCGCUUCUCCGAACUGUCACCGUAUGGUGUGCGUGCCCGAAAGGGAUAGGAGAGCGGGUUUUC-", "-GCCCGCUAAGCCGAACUGUCACCGUAUGGUGUGCGUGCCCGUAAGGGCUAGGCUUGCGGGUUUUG-" ]
rfam_14_5_mafft
URS0000D68F4B_223283_1-52
CUACUCUCCGCCCGUCGCUGCCCAUCAGCGAUCGGGUUUAGUAGCCCGCAGU
.............(((((((.....)))))))((((........))))....
[ "URS0000D68F4B_223283/1-52", "URS0000D6AF05_205918/1-52", "URS0000D69FF6_264730/1-52" ]
[ "CUACUCUCCGCCCGUCGCUGCCCAUCAGCGAUCGGGUUUAGUAGCCCGCAGU", "CUAAUCUCCGUCCGUCGCUGCCUAUCAGCGAUCGGGUUUAGUCGCCCGGAUU", "CUAAUCUCCGCCCGUCGCUGCAUAUCAGCGAUCGGGUUUAGUCGCCCGGAUU" ]
rfam_14_5_mafft
URS0000D68F6E_716541_1-153
UCGGCACGACAUCGAUGGCGACACCGGCGAGCAGCUGGUGUGUGGAGGCAGUCUGAUGAAUAUCAGCCCGGCGAAAGCCGCGAACAGGUCAGAGACCUGGGGAGCCUUGCAAUAACUCAACAUUUCGCCGCCCCGAUGCACAGAUGUCUGCCG
.((((..((((((.....(((((((...........))))).))((((....(((((....)))))..................((((((...))))).)....))))..................................)))))).))))
[ "URS0000D68F6E_716541/1-153", "URS0000D6BD9A_218491/1-148", "URS0000D66078_393305/1-151", "URS0000D69C4B_399741/1-151", "URS0000D69E7B_12908/1-150", "URS0000D69A4D_12908/1-150", "URS0000D65921_12908/1-150", "URS0000D65921_634500/1-150", "URS0000D65921_1027397/1-150", "URS0000D65921_1274722/1-150" ...
[ "UCGGCACGACAUCGAUGGCGACACCGGCGAGCAGCUGGUGUGUGGAGGCAGUCUGAUGAAUAUCAGCCCGGCGAAAGCCGCGAACAGGUCAGAGACCUGGGGAGCCUUGCAAUAACUCAACAUUUCGCCGCCCCGAUGCACAGAUGUCUGCCG", "UCAGCACGACAUCGAUGGCGACGUCAGCAA-CAACUGGCGUGUGGAGGUAGACUGACGAAAGUCAGCCCGGCGUAAGCCGCGAAUGGGU--AACACCCAGGGUGCCUUGCAACAAUUCAACAUUUCGC--CCCCGAUGCACAGAUGUCUGCUG", ...
rfam_14_5_mafft
URS0000D68F73_12908_1-103
CUAAGUCGAACAUAACGACAGUUAAACAAAUGUACGUUCUGACCGCACACUGUAAUGCGGAGAUACAAAUAACAGAUAUAAAAGAAUGUGAAGGAGAGUUGCA
....((((.[[[[..))))..........]]]].(((((...(((((........))))).......................)))))...............
[ "URS0000D68F73_12908/1-103", "URS0000D6B121_12908/1-98" ]
[ "CUAAGUCGAACAUAACGACAGUUAAACAAAUGUACGUUCUGACCGCACACUGUAAUGCGGAGAUACAAAUAACAGAUAUAAAAGAAUGUGAAGGAGAGUUGCA", "AUAGGUCGAGCAUAAAGACAUAUAAACAAAUGCACAUUCGG--CGCAAACUGUAAAGCGCAGUUAUAAAUAACAGAUAU-AAAGAAUGUAAAGGAGAGGCG--" ]
rfam_14_5_mafft
URS0000D68F79_12908_1-62
AAAGUAAUGCAACUACAAGAAAUUGUAUCGGUGACAAGUCCGAGAUAAAUGCAGAGUCAUUU
(((....(((((((((((....)))))[[[..{{{..)).]]]......))))..}}}.)))
[ "URS0000D68F79_12908/1-62", "URS0000D6B2AF_12908/21-73", "URS0000D65937_12908/1-52" ]
[ "AAAGUAAUGCAACU-ACAAGAAAUUGUAUCGGUGACAAGUCCGAGAUAAAUGCAGAGUCAUUU", "AAUGUAAUGCAGCCAAUG---------GCCGGUUACAAGCCCGGG-AAAAUGCAGAGUACAUU", "AACGUAAUGCAGCC-ACG---------GUUAGUGACAAGCCUAAG-UAAAUGCAGAGUCAGUU" ]
rfam_14_5_mafft
URS0000D68F8B_12908_1-63
CCUUUGGAGAGUUAUACCAAACAGGAGUAGUUUUUAACGAAACUGGACUCUAUGAAUUAGGAA
(((.....(((((........(((.....(((...)))....))))))))........)))..
[ "URS0000D68F8B_12908/1-63", "URS0000D6C3A9_12908/1-61", "URS0000D6963A_12908/1-61", "URS0000D6CE1D_12908/1-60", "URS0000D65936_12908/1-62", "URS0000D6CB72_12908/1-63" ]
[ "CCUUUGGAGAGUUAUACCAAACAGGAGUAGUUUUUAACGAAACUGGACUCUAUGAAUUAGGAA", "CCUUUGGAGAGUCAUACCAAACGCAAUUAGGUUUC--CGAAAGCGGGCUCUAUGAAUAAGGAA", "CCUUUGGAGAGUCAUACCAAACGCAAGUAGGAUUC--CGAAAGCGGACUCUAUGAAUAAGGAA", "CCUUUGGACUGCUAUACCAAACGGGAGUAGGUU---ACGAAACCGGGCAGGAUGAAUAAGGAA", "CCUAUGGAGUGUUAUAGAAAACAGGAGUAGGUUCG-CCC...
rfam_14_5_mafft
URS0000D68F96_12908_1-71
CAACAAACUAGCUUGACGAAGCGAAAAGCACUUCCGCUGUGCCUGUUUGUUGUUUUUAUCAAUUAAGCGGA
((((((((..((((....)))).....((((.[[[[[[))))..)))))))).............]]]]]]
[ "URS0000D68F96_12908/1-71", "URS0000D6C391_12908/1-68", "URS0000D6B2A7_12908/1-68", "URS0000D689AC_12908/1-71", "URS0000D665EC_12908/1-71", "URS0000D68E8F_12908/1-68" ]
[ "CAACAAACUAGCUUGACGAAGCGAAAAGCAC-UUCCGCUGUGCCUGUUUGUUGUUUUUAUCAAUUAAGCGGA", "CAACAAACUAGCUUGACGAAGCGAAAAGCACAAGCCUUAGUGCCUGUUUGUUG-UUUUGUUAAUAAGGC---", "CAACAAACUAGCUUGACGGAGCGAAAAGCACAAGCCUUAGUGCCUGUUUGUUG-UUUUGUUAAUAAGGC---", "CAACAAACUAGCUUGACGAAGCGAAAAGCAC-UUCCGCUGUGCCUGUUUGUUGUUUUUAUCGAUUAAGCGGA", "CAA...
rfam_14_5_mafft
URS0000D68F9E_12908_1-68
GACCCAAGUCCGAAUUGUCACCUGCGUUGGUGUGCGUUCCGCAAAGACGGAUAGGACUUGGGUUUUUU
(((((((((((.......((((......)))).....((((......))))..)))))))))))....
[ "URS0000D68F9E_12908/1-68", "URS0000D682A6_12908/1-66", "URS0000D6793E_12908/1-67", "URS0000D6A267_12908/1-66", "URS0000D6B8E2_12908/1-66", "URS0000D6B8F1_12908/1-66" ]
[ "-GACCCAAGUCCGAAUUGUCACCUGCGUUGGUGUGCGUUCCGCAAAGACGGAUAGGACUUGGGUUUUUU-", "UACCCAAAACUCGAAUUGUCACC--GUAUGGUGUGCGUGUCUUACAA--GACUAGAGUUUUGGGUUUUUU", "-AAUCCAGGUCCGAAUUGUCACCUGCGUUGGUGUGCGUUCCGCAAAG-CGGAUAGGACCUGGAUUUUUU-", "-GACCCAGGCCCGAAUUGUUACC--GUAUGGUGUGCGUUCCGCGGAAGCGGAUAGGAUCUGGGUUUUUU-", "-GACCCAGGUC...
rfam_14_5_mafft
URS0000D68FA1_12908_1-37
CCUGCUAAGCCUCUUAACAAUGCUCAAAUCAGCAGGU
((((((.(((...........)))......)))))).
[ "URS0000D68FA1_12908/1-37", "URS0000D68A6D_12908/1-37", "URS0000D68AAD_12908/1-37", "URS0000D6658C_12908/1-37", "URS0000D6AB58_12908/1-37", "URS0000D6CE0D_12908/1-37", "URS0000D65BD7_12908/1-37", "URS0000D65BD7_563193/1-37", "URS0000D65BD7_457424/1-37", "URS0000D65CE3_12908/1-37" ]
[ "CCUGCUAAGCCUCUUAACAAUGCUCAAAUCAGCAGGU", "CUCGCCAAGCCCCUUAACAAUGCUCAAAUAGGCGGGU", "CUCGCCAAGCCUCUUAACAAUGCUCAAAUGUGCGAGG", "CCUGCCAAACCUCUUAACAAUGCUCAAAUUGGCAGGU", "CCUGCCAAGCCUCUUAAUAAUGCUCAAAUAGGCAGGU", "CCUGCCAAGCCUCUUGAUAAUGCUCAAAUCGGCAGGU", "CCUGCCAAGCCUCUUAACAAUGCUCAAAUAGGCGGGU", "CCUGCCAAGCCUCU...
rfam_14_5_mafft
URS0000D68FBB_12908_1-83
GCGGGGUUGAUUCGUCCCCCGCCCGUGGCCAUGGCGGGCAUAGAGGGGGUGAAAACCGGGCGGAAACGGUCGGAUGGCGAAGC
((((((..........)))))).................................((((.((....)).))))..........
[ "URS0000D68FBB_12908/1-83", "URS0000D6C001_12908/1-82", "URS0000D693E7_665956/1-81", "URS0000D693E7_12908/1-81", "URS0000D6C685_12908/1-82", "URS0000D670E7_665956/1-82", "URS0000D67B83_12908/1-82", "URS0000D6C39D_12908/1-83", "URS0000D6CDE2_12908/1-80", "URS0000D6CD57_12908/1-80" ]
[ "GCGGGGUUGAUUCGUCCCCCGCCCGUGGCCAUGGCGGGCAUAGAGGGGGUGAAAACCGGGCGGAAACGGUCGGAUGGCGAAGC", "GCGGGGUCGAUUCGUCCCCCGCCCGUGGCCAUGGCGGGCAUAGA-AGGGGAUAAACCGGGCGGAAACGGCCGUAUGGCGAAGC", "GCGGGG-UGAUUCGUCCCCCGCCCGUGGCCAUGGCGGGCAUAGA-GGGGUAAAAACCGGGCGGAAACGGCCGGAUGGCGAAGC", "GCGGGG-UGAUUCGUCCCCCGCCCGUGGCCAUGGCGGGCAUAGA-GGG...
rfam_14_5_mafft
URS0000D68FD5_12908_1-59
CGGCGUGCCGCACACCGUCAACCAUGCGGCUUCCGGCGCUCUGCGCCGGAACGGAAAGG
......((((((............)))))).((((((.......)))))).........
[ "URS0000D68FD5_12908/1-59", "URS0000D68FD5_1262992/1-59", "URS0000D6CE27_12908/1-59" ]
[ "CGGCGUGCCGCACACCGUCAACCAUGCGGCUUCCGGCGCUCUGCGCCGGAACGGAAAGG", "CGGCGUGCCGCACACCGUCAACCAUGCGGCUUCCGGCGCUCUGCGCCGGAACGGAAAGG", "CGGCGUGCCGCACACCGUCAACCAUGCGGCUUCCGGCGCUUUGCGCCGGAACGGAAAGG" ]
rfam_14_5_mafft
URS0000D68FDD_1306162_1-137
ACGUCACGAUUAAUGAGGCGUUCAUCCUGACUGAGAAUCAGGCACUGAACGGGGAGUAUUCCAUCGCCGUGCUGAGCACGUAGCUAACUCCUGCAAAAACUCAACACAACCCGCGCCCUGCUACACAUUAUCUGACG
.((((..(((.((((...((((((.....................))))))((((........(.(((((((...)))))..)).)..)))).................................))))))).))))
[ "URS0000D68FDD_1306162/1-137", "URS0000D6B271_1306162/1-134", "URS0000D69A59_406817/1-133", "URS0000D69329_406818/1-133", "URS0000D6B753_406817/1-134", "URS0000D65B74_406818/1-133", "URS0000D69556_1306162/1-133", "URS0000D67CB3_406817/1-134", "URS0000D6D2EA_496064/1-118", "URS0000D6D413_1173850/1-...
[ "ACGUCACGAUUAAUGAGGCGUUCAUCCUGACUGAGAAUCAGGCACUGAACGGGGAGUAUUCCAUCGCCGUGCUGAGCACGUAGCUAACUCCUGCAAAAACUCAACACAACCCGCGCCCUGCUACACAUUAUCUGACG", "ACGUCAAGA-UAAUGAGGCGUUCAUCCUGAUU--GAAUCAGGCACUGAACGGGGAGCAUGUCAUCGCUGUGCUGAGCACGUCGCGAGCUCCUGCAAAAACUCAACACAAUCUUCGCUCUGCUACACAUUAUCUGACG", "ACGUCACGA-UAAUGAGGCGUUCAUCCUG...
rfam_14_5_mafft
URS0000D68FE4_12908_1-59
GUCAAAAUAAGAACUUAUCGAAUAGAUCUAUAUAAAUAGAAUCUGCCAGGUGGCAGAAA
..........................(((((....))))).((((((....))))))..
[ "URS0000D68FE4_12908/1-59", "URS0000D6B4A8_12908/1-59" ]
[ "GUCAAAAUAAGAACUUAUCGAAUAGAUCUAUAUAAAUAGAAUCUGCCAGGUGGCAGAAA", "GUCAAAAUAAGAACUUAUCGAAUAGAUCUAUAUAAAUGGAAUCUGCCAGGUGGCAGAAA" ]
rfam_14_5_mafft
URS0000D68FF0_12908_1-180
CUUAGUCGUGGUGUACCAAUCCACACUUAUGGUGCCCUGCGGCAAUAAUAAGGAGGAUUUUUUAUCCGGGAGGCUCCCGGUGCGGCAUUGUGGAGACAUGCCGCAAUGCGUCCGCCAAGCCCGGCGGUCGUGAGAAUGCGGUGCGGAGGCAGCGCAGUCAGGGCCCAAAACAGUAUGGCA
.....((((((.((((((...........)))))).)))))).......................((((..[[[[[))))((((((((.((....))))))))))..(((.(((((......))))).)))..((.((((.(((....))).)))).)).]]]]]...............
[ "URS0000D68FF0_12908/1-180", "URS0000D66F6D_12908/1-179", "URS0000D660A5_12908/1-179", "URS0000D6A3EB_12908/1-178", "URS0000D68F98_12908/1-179", "URS0000D66A09_12908/1-179", "URS0000D67B85_12908/1-179", "URS0000D6BFA0_12908/1-179", "URS0000D6D12A_12908/1-179", "URS0000D65B5A_12908/1-179" ]
[ "CUUAGUCGUGGUGUACCAAUCCACACUUAUGGUGCCCUGCGGCAAUAAUAAGGAGGAUUUUUUAUCCGGGAGGCUCCCGGUGCGGCAUUGUGGAGACAUGCCGCAAUGCGUCCGCCAAGCCCGGCGGUCGUGAGAAUGCGGUGCGGAGGCAGCGCAGUCAGGGCCCAAAACAGUAUGGCA", "CUUAGUCGUGGUGUACCAAUCCACACUUAUGGUGCCCUGCGGCAAUAAUAAGGAGUAUUUUUUAUCCUGGAGGCUCCCGGUGCGGCAUUGUGGAGACAUGCCGCAAUGCGUCCGCCAAGCCCGGCGGUC...
rfam_14_5_mafft
URS0000D68FF8_12908_1-92
UGCGGGUCUGCGCUGGGAGCCACUGUAGGUCGUCCUCACGGGCGGCAGCCGCGCAAUGCGGUGGGAUCCUACAGUCCGGGACCCGCGAUGAG
(((((((...(.(.((......(((((((((((((....)))))))..((((.....)))).......)))))))).)).))))))).....
[ "URS0000D68FF8_12908/1-92", "URS0000D6979C_12908/1-92", "URS0000D68337_12908/1-92", "URS0000D69384_12908/1-92", "URS0000D6AE5D_12908/1-92", "URS0000D699F7_12908/1-92", "URS0000D6B40E_12908/1-92", "URS0000D6A7D5_12908/1-92", "URS0000D67204_12908/1-92" ]
[ "UGCGGGUCUGCGCUGGGAGCCACUGUAGGUCGUCCUCACGGGCGGCAGCCGCGCAAUGCGGUGGGAUCCUACAGUCCGGGACCCGCGAUGAG", "CGUGGGUCUGCCCUGGGAGCCACUGUAGGUCGUCCAAACGGGCGGCAGCCGCGCAACGCAGUGGGAUCCUACAGCCCGAGACUCGCGACGAU", "CGCGGGUCUGCGCUGGGAGGCACUGUAGGUCGUCCGAACGGGCGGCAGCCGCGAAAUGCGGUGGGAUCCUACAGCCCGGGACCCGCGAUAAG", "CGCGGGUCUGCGCUGGGAGGC...
rfam_14_5_mafft
URS0000D68FF9_526975_1-63
AAAGCCUGAUUACUUCGAAGGCUCAAGUUUCACUUGGGUUAUUAGUAGAAGUAAUGGGGCUUU
(((((((.((((((((...(((((((((...))))))))).......)))))))).)))))))
[ "URS0000D68FF9_526975/1-63", "URS0000D6D1ED_527032/1-63" ]
[ "AAAGCCUGAUUACUUCGAAGGCUCAAGUUUCACUUGGGUUAUUAGUAGAAGUAAUGGGGCUUU", "AAAGCCUGAUUACUUCGAAGGCUCAAGUUCCACUUGGGUUAUUAGUAGGAGUAAUGGGGCUUU" ]
rfam_14_5_mafft
URS0000D69003_536232_1-57
CAAGUAAUGUAGCCGCGAAAGUGACAGUCCCAAGCCUGUGUAAAUACAGAGGGUAAA
...(...(((((((((....)))[[[..{{{..)).]]].....))))..}}})...
[ "URS0000D69003_536232/1-57", "URS0000D658F0_413999/1-56", "URS0000D67C1B_12908/17-68" ]
[ "CAAGUAAUGUAGCCGCGAAAGUGACAGUCCCAAGCCUGUGUAAAUACAGAGGGUAAA", "CUUUUAAUGUAGCCACGAAAGUGACAGUCCCAAGCCUG-AUAAAUACAGAGGGAAAG", "UACCUAAUGUAGCCGUG-----GACGGUCACAAGCCCGUGUAAAUACAGAGUGGGUA" ]
rfam_14_5_mafft
URS0000D69006_12908_1-53
CCCUGACAGCGUGCAUUGUGCCGCUGACCUAACCCAGACAGGAGAUCAUCAUG
.((((.(((((..........)))))............))))...........
[ "URS0000D69006_12908/1-53", "URS0000D69179_12908/1-52", "URS0000D6B726_12908/1-52", "URS0000D6C0BE_12908/1-53", "URS0000D65DEE_12908/1-53", "URS0000D6A739_12908/1-53", "URS0000D66CF8_12908/1-53", "URS0000D6AD81_12908/1-51", "URS0000D6BE76_12908/1-51", "URS0000D66BEB_12908/1-53" ]
[ "CCCUGACAGCGUGCAUUGUGCCGCUGACCUAACCCA-GACAGGAGAUCAUCAUG", "CCCUGACAG-CGGCGUUGGGCCGCUGACACUUACCC-GACAGGAGAUUCUCAUG", "CCCUGACAG-AUGCACUAAGUAUCUGACUUAACCCA-GACAGGAGAUCAACAUG", "CCCUGACAG-GUGCGUCCCGUGCCUGACUUAACCCAAGACAGGAGAUCAUCAUG", "CCCUGACAG-GUGCGCCCUGCACCUGACUUAACCCACGACAGGAGAUCAUCAUG", "CCCUGACAG-GUGCG...
rfam_14_5_mafft
URS0000D69014_12908_1-99
AUCCCCGUAUGCGUAAAGUCAUACCAACGGCUUUAUGCGUAAAAUCCUGUAUGGGCCCGGGCCACUACAACGGCAGGGUACCAACAACAAUACAAGGAG
........(((((((..(((........)))..)))))))............((((.(.................).)).)).................
[ "URS0000D69014_12908/1-99", "URS0000D67AEC_12908/1-90" ]
[ "AUCCCCGUAUGCGUAAAGUCAUACCAACGGCUUUAUGCGUAAAAUCCUGUAUGGGCCCGGGCCACUACAACGGCAGGGUACCAACAACAAUACAAGGAG", "--------AUGCGUAAAGUCAUACCAACGGCUUUAUGCGU-AAAUCCUGUAUGGGCCCGGGCCAUUACAACGGCAGGGUACCAACAACAAUACAAGGAG" ]
rfam_14_5_mafft
URS0000D6901A_12908_1-68
GCCAUCACCCUGAACUGUCGCAAUCCAAUGCGCGCGUUCUCUUUAUUGAGAUAGGGGUGGUGGUUUUU
(((((((((((.......((((......)))).....((((......))))..)))))))))))....
[ "URS0000D6901A_12908/1-68", "URS0000D67427_12908/1-65" ]
[ "GCCAUCACCCUGAACUGUCGCAAUCCAAUGCGCGCGUUCUCUUUAUUGAGAUAGGGGUGGUGGUUUUU", "GCUACCGCCUCGAACUGUCGCAAUCCAAUGCG---GCGUUCCCGAAAGGGAUAGGGGCGGUAGUUUAU" ]
rfam_14_5_mafft
URS0000D69021_12908_1-53
UACGCAUGAGGAUAGAGGAAGUCGUGUAGAAGCGACUGGUCGAGAAAUUCGCC
...................((((((......))))))................
[ "URS0000D69021_12908/1-53", "URS0000D69021_1412874/1-53" ]
[ "UACGCAUGAGGAUAGAGGAAGUCGUGUAGAAGCGACUGGUCGAGAAAUUCGCC", "UACGCAUGAGGAUAGAGGAAGUCGUGUAGAAGCGACUGGUCGAGAAAUUCGCC" ]
rfam_14_5_mafft
URS0000D6902C_12908_1-92
AUUGCCCCUGCCUGCCGGGCUUAAAAUGCAGGAUAGGCCGUGCGCGGAGUGGCCGCGCGUUUACAAGUAAAAUCUGGCUGAAAAAGGAGAAU
....(((...[[[[..))).........]]]]...((((..(((((.......))))).................)))).............
[ "URS0000D6902C_12908/1-92", "URS0000D69EA0_12908/1-89", "URS0000D65E6D_12908/1-92" ]
[ "AUUGCCCCUGCCUGCCGGGCUUAAAAUGCAGGAUAGGCCGUGCGCGGAGUGGCCGCGCGUUUACAAGUAAAAUCUGGCUGAAAAAGGAGAAU", "UUUGCCCUUGUCUGCUGGGCUUUAAAUGCAGAAUAGGCAGUGCGCAGAGUGGCUGCGCGUUUACAAAUAAAAUCUGGCCGAAGGAGAGA---", "AUUGCCCCUGCCUGCCGGGCUUUAAAUGCAGGAUAGGCCGUGCGCGGAGUGGCCGCGCGUUUAUAAGCAAAAUCUGGCUGAAAAGGAGUAUA" ]
rfam_14_5_mafft
URS0000D69036_12908_1-74
CUCGCCCUAGGUGAAAAGGUUGCCAAGAGAGGCGGCCUUCUCAAGCAAGUCUUGAGAUAGCCUGGGUGUUUUAU
..(((((..(((........((((......))))....((((((.......))))))..))).)))))......
[ "URS0000D69036_12908/1-74", "URS0000D6D068_12908/1-72", "URS0000D68EB8_12908/1-73", "URS0000D66BEC_12908/1-67", "URS0000D6A617_12908/1-71" ]
[ "CUCGCCCUAGGUGAAAAGGUUGCCAAGAGAGGCGGCCUUCUCAAGCAAGUCUUGAGAUAGCC-UGGGUGUUUUAU", "-CCGCCCUCGGCG-AAAGGUUGCCAUGUGAGGUGACCUUCUCAAGCAAGACUUGAGAUAGCCGAGGGUGUUUUA-", "-CCGCCCCCGGCGAAAAGGUUGCCACGUGAGGUGACCUUCUCAAGCAAGACUUGAGAUAGCCGAGGGUGUUUUA-", "-GCGCCCCCGGCGAUAAGGUUGCCAAGUGAGGUGGUCUUCCU------CUCUGAGGAUAGCCGGGGGUGUUU...
rfam_14_5_mafft
URS0000D69042_12908_1-55
CAGUCGGGAGGGCUGCAUAUCUGCGGUCCGUCGGGCAAGAUAGCCCGCUCGGCUG
((((((((.(((((((......)))))))..(((((......)))))))))))))
[ "URS0000D69042_12908/1-55", "URS0000D6ADAC_1123508/1-49", "URS0000D6AFD9_12908/1-49", "URS0000D65C79_12908/1-50" ]
[ "CAGUCGGGAGGGCUGCAUAUCUGCGGUCCGUCGGGCAAGAUAGCCCGCUCGGCUG", "-GGUUGGGAGGGCUGCAU--GCGCGGUCCGCUGGCGA---UAAGCCGCCCGGCUG", "CGGUUGGGAGGGCUGCAU--UUGCGGUCCGUUGGCG----CAAGCCACCCGGCUG", "CGGUUGGGAGGGCUGCAU---UGCGGUCCGCUGAACGAA--AGUUCGCCCGGCUG" ]
rfam_14_5_mafft
URS0000D69057_12908_1-75
GCAUAGCUUCGGCCCAUGCCCGAAGGUGCUCUUUUGCCGGACAAAUGCCCCGCAGGUGGGGCAAGCAACAUCGGC
(((....(((((.......)))))..)))......(((((.....((((((......)))))).......)))))
[ "URS0000D69057_12908/1-75", "URS0000D690A0_1227361/1-67", "URS0000D69D2D_12908/1-67", "URS0000D6B1C6_398578/1-70", "URS0000D6B1C6_12908/1-70", "URS0000D6C098_12908/1-71" ]
[ "GCAUAGCUUCGGCCCAUGCCCGAAGGUGCUCUUUUGCCGGACAAAUGCCCCGCAGGUGGGGCAAGCAACAUCGGC", "GCAGAGCAGCGGCCCAUGCCCGCUGAUG--CGUGUGCCGGAAUG---CCCCGCAGGUGGGGCAAGCAUCGGC---", "GCAGAGCAGCGGCCCAUGCCCGCUGGUG--CGUGUGCCGGAAAG---CCCCGCAGGUGGGGCAAGCAUCGGC---", "GCAGAGCAGCGGCCCAUGCCCGCUGGUG--CUUGUGCCGGUCUG---CCCCGCAGGUCGGGCAGACAUCAUC...
rfam_14_5_mafft
URS0000D6905A_12908_1-184
UUUCCACGGCCCCGGCCACUCCACAUCAAUGGCCGGACAAGCUGUGAAAAAAAGGAGGAUAAAACCGGCCCGGACUCGGGCUGCGGCAGAGUGGAGACCUGUCGCAACGCGGAGCAGCCUGAAGCGGCUGACCGCGAGCACACAGCAAGCGGAGGCUCUGUGUGCAGAGUCGAGAAACAUGGCA
......(....(((((((...........)))))))....)..........................((((.[[[[[))))((((((((.((....))))))))))..((((..(((..........))).))))..((((((((..(((....))))))))))).]]]]].............
[ "URS0000D6905A_12908/1-184", "URS0000D6A29B_12908/1-183", "URS0000D69E07_12908/1-181", "URS0000D69052_12908/1-184", "URS0000D67A43_12908/1-182", "URS0000D68630_12908/1-181", "URS0000D698BC_12908/1-176", "URS0000D6AB80_12908/1-176" ]
[ "UUUCCAC-GGCCCCGGCCACUCCACAUCAAUGGCCGGACAAGCUGUGAAAAAAAGGAGGAUAAAACCGG---CCCGGACUCGGGCUGCGGCAGAGUGGAGACCUGUCGCA-ACGCGGAGCAGCCUGAAGCGGCUGACCGCGAGCACACAGCAAGCGGAGGCUCUGUGUGCAGAGUC-GAGAAAC-AUGGCA", "AUUCCAC-GGCCCCUGCCACUCCACAAACAUGG-CAGGCAAGCUGUGAAAAAAAGGAGGAUAAAAAAGG---CCUUGACUCAGGCUGCGGCAGUGUGGAGACCUGUCGCA-ACGCGGA...
rfam_14_5_mafft
URS0000D69075_12908_1-81
UCGCCCCCGGCGACAAGGUAGCCAUCUGUGGCUGCCUUUCUCGAUGAGGUUUCUCAUUGGAGAAUAGUCAGGGGUGUUUUA
.((((((.(((........((((......))))....(((((.................)))))..))).)))))).....
[ "URS0000D69075_12908/1-81", "URS0000D69C40_12908/1-69", "URS0000D66CF4_12908/1-68", "URS0000D6CBA7_12908/1-68", "URS0000D6C47C_12908/1-68", "URS0000D6A699_12908/1-69", "URS0000D6597A_12908/1-68", "URS0000D69596_12908/1-69" ]
[ "UCGCCCCCGGCGACAAGGUAGCCAUCUGUGGCUGCCUUUCUCGAUGAGGUUUCUCAUUGGAGAAUAGUCAGGGGUGUUUUA", "UCGCCCCUGGCGAUAAAGUAGCCGCCUGUGGCUGCCUUCCUCA------------UCACGAGGAUAGCCAGAGGCGUUUUC", "CCGCCCCCGACGACAAGGUAGCCAGUUGAGGCUGCCUUCCUCU-------------UACGAGGAUAGUCGGGGGCGUUUUA", "GCGCCCCCGACGACAAGGUAGCCACUUGAGGCUGUCUUCCUCA-----------...
rfam_14_5_mafft
URS0000D69078_1210908_1-53
GACAGACGAGGAUAGAGUAAGUCGCCGCGAGGCGGCUGGCUGUGAAAUUCUCC
...................(((((((....)))))))................
[ "URS0000D69078_1210908/1-53", "URS0000D668B8_12908/1-53", "URS0000D695CD_12908/1-53", "URS0000D693CB_12908/1-53", "URS0000D660CB_12908/1-53", "URS0000D6A3B3_12908/1-53", "URS0000D66DE1_662477/1-53", "URS0000D66DE1_1227452/1-53", "URS0000D66DE1_1227453/1-53", "URS0000D66DE1_12908/1-53" ]
[ "GACAGACGAGGAUAGAGUAAGUCGCCGCGAGGCGGCUGGCUGUGAAAUUCUCC", "AGACUCGGAGGAUAGAGGAAGUCGCCGCGAGGCGGCUGGGCGUGAAAUUCGGC", "CCCGACGGAGGAUAGAGGAAGUCGCCGCGAGGCGGCUGGCCGUGAAAUUCCCC", "CCCGACGGAGGAUAGAGGAAGUCGCCGCGAGGCGACUGGGUGUGAAAUUCGCC", "CCCGACGGAGGAUAGAGGAAGUCGCCGCGAGGCGGCUGGGUGUGAAAUUCGCC", "UCCGACGGAGGAUAGAGGAA...
rfam_14_5_mafft
URS0000D69087_12908_1-53
CCCUGACAGCUUUAUAAUAAAGCUGACUAUAGCCAAGACAGGAGAUCUAAAUG
.((((.(((((.........))))).............))))...........
[ "URS0000D69087_12908/1-53", "URS0000D6BB53_12908/1-53" ]
[ "CCCUGACAGCUUUAUAAUAAAGCUGACUAUAGCCAAGACAGGAGAUCUAAAUG", "CCCUGACAGCUACAUAGUGUAGCUGACACUAGCCAAGACAGGAGAUAGACAUG" ]
rfam_14_5_mafft
URS0000D6908F_12908_1-84
UGCAGAGCGAAAAAGCCUACUAUCUCACUUCAAUCUCCCGGAUAGCAGGUUUUUUUAAUGCAGGAAGACCGGUCGCAACCCCGG
((((..[[[(((((((((............................)))))))))...))))((....{{{..]]]..)).}}}
[ "URS0000D6908F_12908/1-84", "URS0000D6C96E_12908/1-84", "URS0000D66300_12908/1-84", "URS0000D672CE_12908/1-84", "URS0000D67B5C_12908/1-72", "URS0000D69AEB_12908/1-72", "URS0000D6C01A_12908/1-72", "URS0000D67C6F_12908/1-72", "URS0000D6AB22_12908/1-71", "URS0000D6874F_12908/1-71" ]
[ "UGCAGAGCGAAAAAGCCUACUAUCUCACUUCAAUCUCCCGGAUAGCAGGUUUUUUUAAUGCAGGAAGACCGGUCGCAACCCCGG", "UGCAGAGCGAAAAAGCCUACUAUCUCACUUCAAUCUCCCGGAUAGCAGGUUUUUUUAAUGCAGGUAGACCGGUCGCAACCCCGG", "UGCAGAGCGAAAAAACCUACUAUCUCACUUCAAUCUCCCGGAUAGCAGGCUUUUUUAAUGCAGAAAUACCGGUCGCAACCCCGG", "UGCAAAGCGAAAAAGUCUACUAUCUCACUUCAAUCUCCCGGAUAG...
rfam_14_5_mafft
URS0000D69090_465543_1-117
GCGAGACACCCCGACCGGCGGCACCGCGUGACCGAUAAACUGGCGGGGAACCGUUUCGGGUGCAGCUCCCGGACGGUUCACCCAUGAUCAGCCAGCAGCCGCUGCAACCCCAGGGAG
...............................................((((((..(((((.......))))).)))))).............((((....)))).............
[ "URS0000D69090_465543/1-117", "URS0000D6847A_591157/1-117" ]
[ "GCGAGACACCCCGACCGGCGGCACCGCGUGACCGAUAAACUGGCGGGGAACCGUUUCGGGUGCAGCUCCCGGACGGUUCACCCAUGAUCAGCCAGCAGCCGCUGCAACCCCAGGGAG", "GCGAGACACCCCGACCGGCGGCACGGCGUGACCGAUAAACUGGCGGGGAACCGUCCCGGGUGCAGCUCCCGGACGGUUCACCCAUGAUCAGCCAGCAGCCGCUGCAACCCCAGGGAG" ]
rfam_14_5_mafft
URS0000D69094_12908_1-238
UAGUAGUUUGAUGUAUCGAGAGAUGAAGAACGAGGAGCAGGAUACAAGUAUGAUAAAAGGAAUCACAGACAUUCCGUAAGGAUAAUAACCCAUGGAGGGCGAAGAUAUCGUCCUUAUCCUCGGAAGGCAAGUUAGAGGAGAUAGUGUUGCUGGAAAUAGCAAGGCGUCGUGAAAUGCACAGCAGCUCGUCUGUAGUUCCUUAGUAUGCGGGGCGAAUAGGAUAAAACGCAUACCUACA
.....((((.....(((....)))...))))...........................................................(((.((((((((.....)))))))).(((((.............)))))(((.((.(((((......))))).))))))))...(((...)))...................(((((((.................))))))).....
[ "URS0000D69094_12908/1-238", "URS0000D6A770_12908/1-238" ]
[ "UAGUAGUUUGAUGUAUCGAGAGAUGAAGAACGAGGAGCAGGAUACAAGUAUGAUAAAAGGAAUCACAGACAUUCCGUAAGGAUAAUAACCCAUGGAGGGCGAAGAUAUCGUCCUUAUCCUCGGAAGGCAAGUUAGAGGAGAUAGUGUUGCUGGAAAUAGCAAGGCGUCGUGAAAUGCACAGCAGCUCGUCUGUAGUUCCUUAGUAUGCGGGGCGAAUAGGAUAAAACGCAUACCUACA", "UAGUAGUUUGAUGUAUCGAGAGAUGAAGAACGAGGAGCAGGAUACAAGUAUGAUAAAAGGAAUCACAGACA...
rfam_14_5_mafft
URS0000D6909D_12908_1-74
GAGUGAGUAAGUCCCUCUCGAAAAGGAUGAGGCCGCCAAUUAGCGGGUGGGACGAAGUAGAGAGGGGGUCGCUA
.(((((.....((((((((.............((((......)))).............)))))))).))))).
[ "URS0000D6909D_12908/1-74", "URS0000D68283_12908/1-72" ]
[ "GAGUGAGUAAGUCCCUCUCGAAAAGGAUGAGGCCGCCAAUUAGCGGGUGGGACGAAGUAGAGAGGGGGUCGCUA", "GAGCGAGUAAGUCCCUCUCG-AAAGGAUGAUGCUGCUCAUGAGCAGGUGGGACG-AUUAGAGAGGGGUUCACCA" ]
rfam_14_5_mafft
URS0000D690A3_12908_1-223
GCGGGCUUGGAUUCAUGAUGCUGUGGGCCCGCAUCACAGCGCGUCAAGCGGGUGAUCACGGGGAUCUCCAUCACACCCGCCGGUAUAGCCGCGUCUGCUUAAAGUAGGCCGCCAGAGGAAGCUCGCAUCGCUUCUGGUGCUCCGAAUUUCAUAUAGCAGCACGCGCCGCACGCCGUGGAGGGGUGGGCCGAGUUGGAUACGGCUCAGAAAGUGCGGGACGCCG
(((((((..................)))))))...............((((((.............[[[[[...)))))).........((((((((((.......................................................))))).)))))((((((...]]]]]....((((...............))))....)))))).......
[ "URS0000D690A3_12908/1-223", "URS0000D66EEF_12908/1-218", "URS0000D6C1DE_12908/1-217", "URS0000D6CFDD_12908/1-212", "URS0000D67632_12908/1-218", "URS0000D6A054_12908/1-218", "URS0000D67732_12908/1-217", "URS0000D6B621_12908/1-222", "URS0000D6BC81_12908/1-218", "URS0000D69A5F_12908/1-219" ]
[ "GCGGGCUUGGAUUCAUGAUGCUGUGGGCCCGCAUCACAGCGCGUC-AAGCGGGUGAUCACGGGGAUCUCCAUCACACCCGCCGGUAUAGCCGCGUC-UGCUUAAAGUAGGCCGCCAGAGGAAGCUCGCAUCGCUUCUGGUGCUCCGAAUUUCAUAUAGCAGCACGCGCCGCACGCCGUGGAGGGGUGGGCC---GAGUUGGAUACGGCUCAGAAAGUGCGGGACGCCG", "GCGGGCUUGGAAUCAUGAUGCUGUGGGCCCGCAU--CAGCGCGUUCUAGCGAGUGAUCACGGGGAUCUCCA-UACACUCGC...
rfam_14_5_mafft
URS0000D690AD_12908_1-91
UAGAGUCGGUUCCCAAAUGAUGCGCAGCAUCAUUUUUGCAUGGGACCGACGAUCUGCCGCCGAGGCAUCAGCCGAGGGGGCGGGCACUAUA
.......((((((...(((((((...)))))))........)))))).......((((.((..((......))..)).)))).........
[ "URS0000D690AD_12908/1-91", "URS0000D6D0F7_12908/1-89" ]
[ "UAGAGUCGGUUCCCAAAUGAUGCGCAGCAUCAUUUUUGCAUGGGACCGACGAUCUGCCGCCGAGGCAUCAGCCGAGGGGGCGGGCACUAUA-", "CGGAGGAGGCCGCCGAAUGAUGCGGAGCAUCA-UUUUGCAUGCGGCCGACGAACUGCCGCCGAGGC-UAAGCCGAGGGGGC-GACACCAUCG" ]
rfam_14_5_mafft
URS0000D690AF_1037915_1-79
CUGUAGCCAGGACAGCCCUCGGGAAGACCUGGACGUCGAUAGCCGGAUAGUGCGACGUACGGAAUCAACACCGGCAGCC
((((..[[[[[))))((....))....]]]]].(((((...[[[[[......))))).............]]]]]....
[ "URS0000D690AF_1037915/1-79", "URS0000D679FC_1117958/1-78", "URS0000D6D013_1144328/1-78", "URS0000D694B9_12908/1-78", "URS0000D687C1_12908/1-79", "URS0000D687C1_220664/1-79", "URS0000D6C2CA_12908/1-79", "URS0000D6CEF9_12908/1-79", "URS0000D6B570_220664/1-79" ]
[ "CUGUAGCCAGGACAGCCCUCGGGAAGACCUGGACGUCGAUAGCCGGAUAGUGCGACGUACGGAAUCAACACCGGCAGCC", "CUGUAGCCAGGACAGCCCUCGGAAAGGCCUGGACGUCGAUAGCCGGACAGUGCGACGUACGGAA-CAACACCGGCAGCC", "GUGUAGACAGGACAGCCUUCGGGA-AGCCUGGACGUCGAUAGGCGGAUAGUGCGACGUACGGAAUCAACACCGGCAGCC", "CUGUAGCCAGGACAGCCCUCGGGAUAGCCUGGACGUCGAUAGCCGG-UAGUGCGACGUAC...
rfam_14_5_mafft
URS0000D690B8_12908_16-84
GCCGUAAUGCAGCCCCCUGCCCGAUUGGGCCGGGGCCGGUCCCAAGCCCGGAAAAAUGCAGAGGGCGGA
.(((...((((((((((.(..........).))))[[[..{{{..)).]]].....))))..}}}))).
[ "URS0000D690B8_12908/16-84", "URS0000D69103_663278/15-65", "URS0000D69823_411471/22-83", "URS0000D67AFD_12908/16-74", "URS0000D68E90_12908/23-81", "URS0000D6A709_12908/16-74", "URS0000D6BBE5_12908/16-83", "URS0000D6BEA6_12908/1-68", "URS0000D69B41_12908/16-83", "URS0000D6AA86_12908/16-83" ]
[ "GCCGUAAUGCAGCCCCCUGCCCGAUUGGGCCGGG----------GCCGGUCCCAAGCCCGGAAAAAUGCAGAGGGCGGA", "GCCUUAAUGC-----------------GGCCAGA----------GCCGGUCCCCAGCCCGGAA-AACGCAGAGGGAGGC", "GCCUUAAUGC-----------------AGCCAGGGCGUAGCCCUGCCGGUCCCAAGCCCGGAAUGAUGCAGAGGGAGGU", "CCUGUAAUGCAGCCGCC----------GAUAGGC----------GCAGGUCACAAGCCCU...
rfam_14_5_mafft
URS0000D690BE_445972_1-184
AUAGGCUGCAGGCCUCUACUCCUACUUUAUAGGGGCGUGUAAGCCAUAAAAAAGGAGGAAGCAAAUCCCGUCGGGCCGGCGGUGCGGCAGUGUGGAGACCUGUCGUAAUGUCCGUGCAGGUUCGCUCUGCGCGGAUAAGGGGCGCUUGCGGGAGCAGGUAGUCCCACGGCUUGUAUACAUGGCA
......((((.(((((((...........))))))).))))..........................(((([[[[[[[))))((((((((.((....))))))))))..(((((((((.........)))))))))..(((((...(((....)))....))))).]]]]]]]...........
[ "URS0000D690BE_445972/1-184", "URS0000D690BE_12908/1-184" ]
[ "AUAGGCUGCAGGCCUCUACUCCUACUUUAUAGGGGCGUGUAAGCCAUAAAAAAGGAGGAAGCAAAUCCCGUCGGGCCGGCGGUGCGGCAGUGUGGAGACCUGUCGUAAUGUCCGUGCAGGUUCGCUCUGCGCGGAUAAGGGGCGCUUGCGGGAGCAGGUAGUCCCACGGCUUGUAUACAUGGCA", "AUAGGCUGCAGGCCUCUACUCCUACUUUAUAGGGGCGUGUAAGCCAUAAAAAAGGAGGAAGCAAAUCCCGUCGGGCCGGCGGUGCGGCAGUGUGGAGACCUGUCGUAAUGUCCGUGCAGGUUCGC...
rfam_14_5_mafft
URS0000D690C5_12908_1-91
GAUCGGUACGGUCAAGGCUUUACCGACAGACUUUUCAAGAAGUCAGAGGAUUCGGCCCGUUCGGGGCAAUACCCGGCAAACAUCAAAAAGG
..((((((.(((....))).))))))...................................((((......))))................
[ "URS0000D690C5_12908/1-91", "URS0000D6CB46_12908/1-91" ]
[ "GAUCGGUACGGUCAAGGCUUUACCGACAGACUUUUCAAGAAGUCAGAGGAUUCGGCCCGUUCGGGGCAAUACCCGGCAAACAUCAAAAAGG", "GAUCGGUACGGUCAAGGCUUUACCGACAGACUUUUCAAGAAGUCAGAGGAUUCGGCUCGUUCGGGGCAAUACCCGGCAAACAUCAAAAAGG" ]
rfam_14_5_mafft
URS0000D690C9_12908_1-571
GAUUUUAAACAAUCUACUGAAUAACCAAGUGUAGAUAGGGUGACACCUUGCUUGGAUUGUAUACAUAAUUCCCGUUACGCUCUCCGUGAGAUAUUGCGGAGGGAUAAGUAAUUCUCUUUUGAGUAAUUGAAAGAGAUCAUGAAGUGUAAGAAGAUUGAGGGUGUAUGCAGUAUAGAGGUUGUGCGUAAUUAGACCAUUAUCAGACGGUGGCGGUGAUAAUAGACGCUUUCGGUGAAAGAAUAAUCUGGGGUAGGCCUUGCGUAGCAGUAAGAACUGAACCAGAAAUGCUAAAAUAAACCGUUUUGCACUUGAGGCCGAGG...
.......((..(..((.(.((...(((((.......(((......)))..))))).((((((............((((.(.((((((((....))))))))).....)))).((((((((((....)))))))))).(((...)))..................)))))).......(.(.......(.(....(.((((.....(((((((((...........((((.....)))).....((((.(......(((((.[[[[.))))).......)))))...]]]]......)))))..[[[[[.....(((((.....
[ "URS0000D690C9_12908/1-571", "URS0000D66BDF_12908/1-568", "URS0000D69DDD_12908/1-569", "URS0000D6738F_12908/1-567", "URS0000D68BEC_12908/1-567", "URS0000D6A570_12908/1-567", "URS0000D69C99_12908/1-567", "URS0000D6AB42_12908/1-570", "URS0000D6A7D2_12908/1-571", "URS0000D69694_12908/1-570" ]
[ "GAUUUUAAACAAUCUACUGAAUAACCAAGUGUAGAUAGGGUGACACCUUGCUUGGAUUGUAUACAUAAUUCCCGUUACGCUCUCCGUGAGAUAUUGCGGAGGGAUAAGUAAUUCUCUUUUGAGUAAUUGAAAGAGAUCAUGAAGUGUAAGAAGAUUGAGGGUGUAUGCAGUAUAGAGGUUGUGCGUAAUUAGACCAUUAUCAGACGGUGGCGGUGAUAAUAGACGCUUUCGGUGAAAGAAUAAUCUGGGGUAGGCCUUGCGUAGCAGUAAGAACUGAACCAGAAAUGCUAAAAUAAACCGUUUUGCACUUGAGGC...
rfam_14_5_mafft
URS0000D690D2_12908_1-128
GUUCUUUUGUUCUUACGAGGCAUUGGGCGGGUACUUUACAAGGUGCCAGCCUUUGCAUCCAGCUUCGGCAAACUUAUGUCCGAGUGGUGGCAAUGGCAGGGAGUAGCUCAUCGAAACCUGCUGUCACU
((.((..(((.((....)))))..)))).((((((......))))))..............((....)).................(((((.....((((.....(.....)....))))..))))).
[ "URS0000D690D2_12908/1-128", "URS0000D6593B_12908/1-127", "URS0000D69707_12908/1-127", "URS0000D6C07B_12908/1-127", "URS0000D66AE6_12908/1-128", "URS0000D68B11_12908/1-128" ]
[ "GUUCUUUUGUUCUUACGAGGCAUUGGGCGGGUACUUUACAAGGUGCCAGCCUUUGCAUCCAGCUUCGGCAAACUUAUGUCCGAGUGGUGGCAAUGGCAGGGAGUAGCUCAUCGAAACCUGCUGUCACU", "GCUCUGCUGUUUCUACGGGGCAGCAGGCCGGUGC-UAAUCAGGUGCCAGCCAUCAAGUCCAGCUUCGGCAAACUCAUGUCCGAGUGGUGGCAAUGGCAGGGAGUAGCUCAUCGAAACCUGCUGUCACU", "GCUCUGCUGUUUCUACGGGGCAGCAGGCCGGUGC-UAAUCAGGUGCC...
rfam_14_5_mafft
URS0000D690D4_12908_1-175
UCAUUCCCCUAAAGCAUGUUAAACCUAACGCCCUAAGCCCAUAAACGGUAUGUGAAGAUGCAUACUACGGGAUCGUGUACUUGUACAAAUGAUAAUCUCACAGGAGAUUAUUAAUUAUAAGAAGGAGAAGAGGUUCCCUCUGAAUAAGAAAUAGGAAUAAGAGGGCAUGCUUAUU
..........((((((((...(((((...........(.........((((((......)))))).....)....((((....))))..(((((((..........))))))).................)))))((((((..................))))))))))))).).
[ "URS0000D690D4_12908/1-175", "URS0000D6C05B_12908/1-175", "URS0000D6C5C1_12908/1-175", "URS0000D6A684_12908/1-175" ]
[ "UCAUUCCCCUAAAGCAUGUUAAACCUAACGCCCUAAGCCCAUAAACGGUAUGUGAAGAUGCAUACUACGGGAUCGUGUACUUGUACAAAUGAUAAUCUCACAGGAGAUUAUUAAUUAUAAGAAGGAGAAGAGGUUCCCUCUGAAUAAGAAAUAGGAAUAAGAGGGCAUGCUUAUU", "UCAUUCCCCUAAAGCAUGUUAAACCUAACGCCCUAAGCCCAUGAACGGUAUGUGAAGAUGCAUACUACGGGAUUGUGUACUUGUACAAAUGAUAAUCUCACAGGAGGUUAUUAAUUAUAAGAAGGAGAAGAGGU...
rfam_14_5_mafft
URS0000D690D6_266264_1-85
UCCCCCGCUACUCCUCCCUGAGCGGGUACCCGCCCUGAACCGGCGGGAAAGUUCGUCCCCGUUGUUCGCAACGGGGCUUUUUUUU
...((((((...........))))))..((((((.......)))))).........((((((((....)))))))).........
[ "URS0000D690D6_266264/1-85", "URS0000D6661D_381666/1-83", "URS0000D681BF_264198/1-84" ]
[ "UCCCCCGCUACUCCUCCCUGAGCGGGUACCCGCCCUGAACCGGCGGGAAAGUUCGUCCCCGUUGUUCGCAACGGGGCUUUUUUUU", "UCCCCCGCUACUCCUCCCUGAGCGGGUACCCGCCCC--AGCGGCGGGAAAGUUUGUCCCCGUUGCUUGCAGCGGGGCUUUUUUUU", "UCCCCCGCUACUCCUCCCUGAGCGGGUACCCGCCUC-AACCGGCGGGAAAGUUCGUCCCCGUUGCUUGCAACGGGGCUUUUUUUU" ]
rfam_14_5_mafft
URS0000D690D7_316275_1-139
ACAAUCUCGGGGUAAGUUCUGGGGGAAACGCGUAAUGACCAUUAAAGCUGGUGACAUUACGUAAGGUAGGUAUCAGUAAAACUUUACUGAUAGAAGGGAUACUAGUGGCAACGGUGCCAUAUAAACGGGAAACCCAACA
.....((((((......))))))......((((((((..(..........)...))))))))........(((((((((....))))))))).............(((((....)))))....................
[ "URS0000D690D7_316275/1-139", "URS0000D67611_626086/1-139", "URS0000D6C185_1269941/1-139" ]
[ "ACAAUCUCGGGGUAAGUUCUGGGGGAAACGCGUAAUGACCAUUAAAGCUGGUGACAUUACGUAAGGUAGGUAUCAGUAAAACUUUACUGAUAGAAGGGAUACUAGUGGCAACGGUGCCAUAUAAACGGGAAACCCAACA", "ACAAUCUCGGGGUAAGUUCUGGGGGAAACGCGUAAUGACCAUUAAAGCUGGUGACAUUACGUAGGGUAGGUAUCAGUAAAAUUUUACUGAUAGAAGGGAUACUAGUGGCAACAGUGCCAUAUAAACGGGAAACCCAACA", "ACAAUCUCGGGGUAAGUUCUGGGGG...
rfam_14_5_mafft
URS0000D690FF_12908_1-242
CUGGGUCACAUGGAGUAGCAGACUGGAUUCCUUCUGGUCAGGUGAAAGACGACCUUAGCAAAAGGAGAGAUACUUCCCUGGGUACCCAAUCCCUAAAACUGCCCUUUGAUGCCCCCGCACGGACGCUUCUUGCAUGGCGGGAGAUUGUGCCAGCUCCCGUUUCAUGUGCGUUGGGGCAACGCAGAUUUAGACGGCACCCUACAAGACAACUGUACGGAGGGCGAAUACUUUUUUAUGACCAG
..(((((..........((......................)).......)))))........................(((........))).......((((((((..(((((((((((...((.....))..(((((((............)))))))...))))))..)))))...((((.........................)))).))))))))....................
[ "URS0000D690FF_12908/1-242", "URS0000D6BAF8_12908/1-163", "URS0000D65E36_12908/1-229", "URS0000D68B4C_12908/1-237", "URS0000D66223_12908/1-234", "URS0000D65B0C_12908/1-223", "URS0000D6C5E2_12908/1-155", "URS0000D6D345_12908/1-220", "URS0000D6D345_552398/1-220", "URS0000D6B742_12908/1-220" ]
[ "CUGGGUCACAUGGAGUAGCAGACUGG--AUUCCUUCUGG---UCAGGUGAAAGACGACCUUAGCAAAAGGAGAGAUACUUCCCUGGGUACCCAAUCCCU-AAAACUGCCCUUUGAUGCCCCC-GCACGGACGCUUCUUGCAUGGCGGGAGAUUGUGCCAGCU-CCCGUUUCAUGUGCGUUGGGGCAACGCAGAUUUAGACGGCACCCUACAAGACAACUGUACGGAGG-GCGAAUACUUUU--UUAUGACCAG--", "------------------------------------------------------...
rfam_14_5_mafft
URS0000D69117_12908_1-62
CAUCCUGAAAGACGGUACCCAAGCUGUUCACGCAGCCGGACCGAAGCGGAAAGGAAGAUAUG
............((((.((..................))))))...................
[ "URS0000D69117_12908/1-62", "URS0000D6BFF3_314345/1-52", "URS0000D67475_1188231/1-52", "URS0000D690FD_12908/1-49", "URS0000D67F0E_1131284/1-51" ]
[ "CAUCCUGAAAGACGGUACCCAAGCUGUUCACGCAGCCGGACCGAAGCGGAAAGGAAGAUAUG", "CAUCCUGAAAGACGGUAC----------CACCAAGGUGGACCGAAGCGGAAAGGAAGCGAUG", "CAUCCUGAAAGACGGUAC----------CAUCAAGGUGGACCGAAGCGGAAAGGAAGCGAUG", "CAUCCUGAAAGACGGUAC----------CACGCAGGUGGAUCGAAGCGGCAAGGCAAUG---", "CAUCCUGAAAGACGGUAC----------UGCUGCGGCAGACUG...
rfam_14_5_mafft
URS0000D69127_12908_1-135
AAUCGGUUCUACGGCACAGCCGACGUGUCGGCAAUCGCAGUGACCGAGGGAGAUGCGCCACGCUCAUAGAGUGAAAAAUCAAUGUGGUGGGUAGAGUUUGGUAGGUCCUUCAUGGAUUCGAAGAAGUCAGACCCC
..(((((......((...(((((....)))))....))....))))).............((((.....))))...............((...(..(((......((......)))......))..)....))..
[ "URS0000D69127_12908/1-135", "URS0000D6BD40_12908/1-132" ]
[ "AAUCGGUUCUACGGCACAGCCGACGUGUCGGCAAUCGCAGUGACCGAGGGAGAUGCGCCACGCUCAUAGAGUGAAAAAUCAAUGUGGUGGGUAGAGUUUGGUAGGUCCUUCAUGGAUUCGAAGAAGUCAGACCCC", "CAUCGGUUCUACGGCACCGCCGACGUGUCGGC-AUCGCAGUGACCGAGGGAGAUGCGCCGCACUCAUGGAGUGAAAAAUCAA-GGAGUGGGUAGAGUUUGGUAGGUCCCAU-CGGACUCGAAGAAGUCAGACCCC" ]
rfam_14_5_mafft
URS0000D69137_12908_1-48
AUUGGAUGCGCUCCGGACAAAUGGAUAAGAUGAAGCAUUGUACGGAGU
..........(((((.(((...................))).))))).
[ "URS0000D69137_12908/1-48", "URS0000D65CCD_12908/1-47", "URS0000D65F40_12908/1-45", "URS0000D69DBC_12908/1-43" ]
[ "AUUGGAUGCGCUCCGGACAAAUGGAUAAGAUGAAGCAUUGUACGGAGU", "UCAGACUCCGCUCCGGACAAAUGAACC-GAUGAAGCAUUGUUCGGAGC", "---GGACAAGCUCCGCACAAAUGGAUUGGAUGAGACAUUGUACGGAGC", "-----GGAAGCUCCGCACAAAUGGAAUGGAUGAGACAUUGUACGGAGC" ]
rfam_14_5_mafft
URS0000D69152_12908_1-109
ACUAAGAGAGGUGGAAAAAUGGACAUCCAUGAGCCUUAUACCCUUUGGCAGAGAUGCAGGGCAGUAUUGGUAUAAGAGAGAUGCGGGGCGAGUCCUCCCGCCUCUUAGU
((((((((..(((((.....[[[[.)))))..(((..(............................).)))...........(((((....]]]].)))))))))))))
[ "URS0000D69152_12908/1-109", "URS0000D6D142_12908/1-109" ]
[ "ACUAAGAGAGGUGGAAAAAUGGACAUCCAUGAGCCUUAUACCCUUUGGCAGAGAUGCAGGGCAGUAUUGGUAUAAGAGAGAUGCGGGGCGAGUCCUCCCGCCUCUUAGU", "AUUAAGAGAGGUGGAAAUAUGGACAUCCACAAGCCUUAUACCCUUUGGCAUUUAUGCAGGGCAGUAUUGGUAUAAGAGAGAUGCAGGGCGAGUCCUCCUGCCUCUUAAU" ]
rfam_14_5_mafft
URS0000D69162_12908_1-51
UGGGCUGAACAUUAUGCGUUCCUGGUCCAUCGACAGGCGGGGAUAUACCUC
((((((((((.......))))..))))))......................
[ "URS0000D69162_12908/1-51", "URS0000D6AE69_12908/1-51", "URS0000D6799A_12908/1-47" ]
[ "UGGGCUGAACAUUAUGCGUUCCUGGUCCAUCGACAGGCGGGGAUAUACCUC", "UGGGCUGAGCAAUAUGCGCUCCUGGUCCACCGAAAGGCGGGGAUAUACCCC", "UGGGCUGAACGCAA---GCUCCGGGUCCAUCGA-GGGCGGGGAAGUUCCCC" ]
rfam_14_5_mafft
URS0000D69181_12908_1-158
CGGGCGCAAGCCCGUAAAUAUGCACCCCGCGACGGUUGCCGUUCGCUGCUUGCAUGGCGCGGUUCUCGGCGUUCGACCGCGUUUCAUGGUCAACCGUCAAGCGGCUGCUGGAUGCCGAUUGCGAGCCGCGCGGGGUGCCCUCAUGAACUCUGAAGAGC
((((......)))).......((((((((..((((((((((...((.....))..(((((((..............)))))))...))).)))))))...(((((...................))))).))))))))....................
[ "URS0000D69181_12908/1-158", "URS0000D6B928_445975/1-157", "URS0000D6B106_12908/1-158" ]
[ "CGGGCGCAAGCCCGUAAAUAUGCACCCCGCGACGGUUGCCGUUCGCUGCUUGCAUGGCGCGGUUCUCGGCGUUCGACCGCGUUUCAUGGUCAACCGUCAAGCGGCUGCUGGAUGCCGAUUGCGAGCCGCGCGGGGUGCC-CUCAUGAACUCUGAAGAGC", "CGGGCGCGUGCCCGUAAAUUUGCACCCCGAGACGGUUGCCGUUCGCUUCUUGCAUGGCGCGGGAUUUGGCACCUGCCCGCGCUUCAUGGUCAUCCGUCAAGCGGCUUGCGGGUGCCGCAUG-AAGCCGUUCGGGGUGCCUCCCAUGAACU...
rfam_14_5_mafft
URS0000D6918B_12908_1-86
CCUUUGGAGUGUGAUACCAGACGUUAGUAGAAUGUUGAAUUUUCAACGAAUUUUCAACUUCGAGAACGCACACGAGGAAGAAGGAA
(((((...(((((........(((.....(((.((.....................)))))....))))))))......)))))..
[ "URS0000D6918B_12908/1-86", "URS0000D663F2_12908/1-86", "URS0000D6B7E4_12908/1-86", "URS0000D69FC6_12908/1-86", "URS0000D6CBF8_12908/1-86", "URS0000D6C6F0_12908/1-86", "URS0000D68166_12908/1-86", "URS0000D692B1_12908/1-86", "URS0000D69F2A_12908/1-86", "URS0000D6657D_12908/1-86" ]
[ "CCUUUGGAGUGUGAUACCAGACGUUAGUAGAAUGUUGAAUUUUCAACGAAUUUUCAACUUCGAGAACGCACACGAGGAAGAAGGAA", "CCUUUGGAGUGUGACACCAAACGUUAGUAGAACGCUGAAUUUUCAAUGAACUUUCAGCUUCAAGAACGCACACGAGGAAGAAGGAA", "CCUUUGGAGUGUGACACCAAACGUUAGUAGAACGCUGAAUUUUCAAUGAACUUUCAGCUUCAAGAACGCACACGGGGAAGAAGGAA", "CCUUUGGAGUGUGACACCAAACGUUAGUAGAACGCUGAA...
rfam_14_5_mafft
URS0000D69195_12908_1-104
UGCAACAGGGGAAGCAUCGAUCCUCGGACCGAUUUCCGGUCGCCGAGUGGGUCCAGAACCCGCGCGUCCGAGGGGAGCGAGUGGCGAGACCGACCCCAGGUCCG
((.(.(.((((..((......((((((((........[[[[[[[.....................))))))))...))....]]]]]..]]..)))).).).))
[ "URS0000D69195_12908/1-104", "URS0000D6B8A2_12908/1-104", "URS0000D6B8A9_12908/1-104", "URS0000D6C892_12908/1-104" ]
[ "UGCAACAGGGGAAGCAUCGAUCCUCGGACCGAUUUCCGGUCGCCGAGUGGGUCCAGAACCCGCGCGUCCGAGGGGAGCGAGUGGCGAGACCGACCCCAGGUCCG", "UGCAACAGGGGAAGCAUCGAUCCUCGGACCGAUUUCCGGUCGCCGAGUGGGUCCAGAACCCGCGGGUCCGAGGGGAGCGAGUGGCGAGACCGACCCCAGGUCCG", "UGCAACAGGGGAAGCUUCGAUCCUCGGACCGAUGUCCGGUCGCCAGGUGGGUCCAGAACCCGCCGGUCCGAGGGGAGCUAGUGGCGAGACCGACC...
rfam_14_5_mafft
URS0000D69199_12908_1-80
GCUGGUGCUUGAAAUAGAUGACAGGGGAACAUUCCUGGGCGGUAGUGACGUGAUUGCAAGACGUGAUUACCGUUUACAUA
.....................(((((......)))))(((((((((.((((.........)))).)))))))))......
[ "URS0000D69199_12908/1-80", "URS0000D6BB61_12908/1-76", "URS0000D6AC1A_12908/1-76", "URS0000D69B00_610130/1-76", "URS0000D69199_999412/1-80", "URS0000D6CF38_12908/1-80", "URS0000D65F14_1263067/1-80", "URS0000D65F14_566550/1-80", "URS0000D65D55_12908/1-76", "URS0000D6B6BC_12908/1-76" ]
[ "GCUGGUGCUUG--AAAUAGAUGACAGGGGAACAUUCCUGGGCGGUAGUGACGUGAUUGCAAGACGUGAUUACCGUUUACAUA", "GCUGGUGCUUU--AUAAUAGAUACAGGGAA----ACCUGGGCGGUAAUUGUGCAGUUGCAAAGCAUAUUUACCGUUUACAUA", "GCUGGUGCUGA--AGAUAGAUGACAGGUUA----GCCUGGGCGGUAGUGACGUGAUUGCAAGGCGUUAUUACCGUUUACAUA", "GCUGGUGCUUU--AGAUAGAUGACAGGUUA----CCCUGGACGGUAGUGAC...
rfam_14_5_mafft
URS0000D6919B_12908_1-84
AAUGAUACUUCUGUGUAAGGCACAGCUCGCCGGAAGGCGGGAUAUGUUGUUUCAGGCUGGAAACUGAUGUCUCUUAUAACAUAU
..........(((((.....)))))((((((....))))))((((((.((...((((...........))))...)).))))))
[ "URS0000D6919B_12908/1-84", "URS0000D662AF_12908/1-81", "URS0000D6651C_12908/1-81", "URS0000D69DB2_12908/1-81", "URS0000D698EB_213810/1-82", "URS0000D698EB_12908/1-82", "URS0000D67384_657319/1-81", "URS0000D66D80_12908/1-81" ]
[ "AAUGAUACUUCUGUGUAAGGCACAGCUCGCCGGAAGGCGGGAUAUGUUGUUUCAGGCUGGAAACUGAUGUCUCUUAUAACAUAU", "AACGAUACUUCUGC--CGAAAGCAGCUCGCCGGAAGGCGGGAUAUGUUGUUUCAGGCUGAAAACU-AUGUCUGUUACAACAUAU", "AAGGAUACUUCUGC--AAAAAUCAGCUCGCCGGAAGGCGGGAUAUGUUGUUUCAGGCUGAAAACC-AUGUCUGUUACACCAUAU", "AAGGAUACUUCUGC--AAAAAGCAGCUCGCCGGAAGGCGGGAUAU...
rfam_14_5_mafft
URS0000D691B7_12908_1-65
AAAUCCCUGCCAAACCGAAGUCUGACGUUAUGCGUCAGAUACUAAUGUAGGUGCGGUGGGGGUUU
(((((((((((..(((...(((((((((...))))))))).........)))..)))))))))))
[ "URS0000D691B7_12908/1-65", "URS0000D681F1_12908/1-65", "URS0000D67E27_12908/1-64", "URS0000D669A3_12908/1-63" ]
[ "AAAUCCCUGCCAAACCGAAGUCUGACGUUAUGCGUCAGAUACUAAUGUAGGUGCGGUGGGGGUUU", "CAAGCCCUGCCUGUCCGAAGUCUGACGUUAUGCGUCAGAUACUCAUGUAGGCCAGGUGGGGUUCU", "CAGACCCUGCCAAACCGAAGUCUAACGCUCCGCGUCAGAUAGUAAU-UAGGUGCGGUGGGGUUUA", "AACUCCCUACCAAACUGAAGCCUGACGUUAUGCGUCAGAGAUAAGUAGGAAUGGCGGGGAGUU--" ]
rfam_14_5_mafft
URS0000D691BC_12908_1-72
UGCCAGCCCGAUCAGGCGUAAAACAGUCGGCUUAACCUGAAAUCAUGCGGUGAUACCGCGUAAAAAAUCGUA
((((.....[[[..)))).......]]].................((((.......))))............
[ "URS0000D691BC_12908/1-72", "URS0000D6AF0C_12908/1-61" ]
[ "UGCCAGCCCGAUCAGGCGUAAAACAGUCGGCUUAACCUGAAAUCAUGCGGUGAUACCGCGUAAAAAAUCGUA", "UGUCAGCCCGGUUAGACGUAAAACGGCCGGC-----------UCAUGUGGUGAGACCACGUAAAAAAUCGUA" ]
rfam_14_5_mafft
URS0000D691BF_12908_1-57
CGCAGAGCAACGGGGCAUUUCUGCCCCGGUAAUGCGGGGGAACGGUUGCAACCCCGU
((((..[[[.(((((((....)))))))....))))((...{{{..]]]..)).}}}
[ "URS0000D691BF_12908/1-57", "URS0000D69ACD_12908/1-57" ]
[ "CGCAGAGCAACGGGGCAUUUCUGCCCCGGUAAUGCGGGGGAACGGUUGCAACCCCGU", "CGCAGAGCCACGGGGCAGCAAUGCCCCGGUAAUGCGGGGGAACGGUGGCAACCCCGU" ]
rfam_14_5_mafft
URS0000D691CE_536233_1-65
AAUACUCUGUAUUAACCGAAUAUCUAAGUUUAUACUUGGAUGUCUUGUAGGUUGUAUGGGGUAUU
((((((((((((..(((...(((((((((....))))))))).......))).))))))))))))
[ "URS0000D691CE_536233/1-65", "URS0000D69D45_1221327/1-59" ]
[ "AAUACUCUGUAUUAACCGAAUAUCUAAGUUUAUACUUGGAUGUCUUGUAGGUUGUAUGGGGUAUU", "AAUACCCUGUAUAACUGAAAU------CUUAAUACUUGAGACAUUAGUAGGUUAUAUGGGGUAUU" ]
rfam_14_5_mafft
URS0000D691D6_12908_1-85
UGCGCCACGGGGAGCGAUGACGCGCGGCCCAGAUCCGAGUCGCCGGGGCCGCGCCGAGCGACUGGCGAGACCGACCCGCGGGUGA
(...((.((((..((......((((((((.........[[[[[[..))))))))...))....]]]]]..]...)))).))...)
[ "URS0000D691D6_12908/1-85", "URS0000ABAA80_12908/1-84" ]
[ "UGCGCCACGGGGAGCGAUGACGCGCGGCCCAGAUCCGAGUCGCCGGGGCCGCGCCGAGCGACUGGCGAGACCGACCCGCGGGUGA", "CGGUCUGCGGGAGGCGAUGACGCGCGGGCCA-AUGCCGGCCGCCGGGACCGCGCGGAGCCACUGGCGAGACCGACCCGCGGGUGC" ]
rfam_14_5_mafft
URS0000D691DE_12908_1-53
CUAGCCUGUUUCGGUCGCUGCCAAUUCAGCGAUCGGGUCUGGAAACCCGGAUG
.............(((((((......)))))))((((........))))....
[ "URS0000D691DE_12908/1-53", "URS0000D67DF4_351746/1-53", "URS0000D66A36_12908/1-53", "URS0000D69B42_12908/1-53" ]
[ "CUAGCCUGUUUCGGUCGCUGCCAAUUCAGCGAUCGGGUCUGGAAACCCGGAUG", "CUAGGCUUUCGCGGUCGCUGUCAGUUCAGCGAUCGGGUGUGGAAGCCUGGGUG", "CUAGGCUUUUUCGGUCGCUGUCAGUUCAGCGAUCGGGUGUGGAAGCCUGGGUG", "CUAGGCUGACCAGGUCGCUGUCGGUUCAGCGAUCGGGUGUGGAAACCCGGAUG" ]
rfam_14_5_mafft
URS0000D691DF_12908_1-110
UCAUUGAGAUGCUGGGCGCUAUGGUCGUCCUCCUCCGGCUGACCUCCUUCUCAGCUGCUGACCGGCGCCGCACAGGCGGCAUCUCAGCUUCGUGUGCAAAAAAGCCCGUC
......(((((((.((((((...(((.........(((((((........)))))))..))).))))))[[[[[[[[)))))))..]]]].]]]]...............
[ "URS0000D691DF_12908/1-110", "URS0000D6C30D_12908/1-109", "URS0000D6BC42_12908/1-108" ]
[ "UCAUUGAGAUGCUGGGCGCUAUGGUCGUCCUCCUCCGGCUGACCUCCUUCUCAGCUGCUGACCG-GCGCCGCACAGGCGGCAUCUCAGCUUCGUGUGCAAAAAAGCCCGUC", "UCAUUGAGAUGCUGGGCGCUAUGGUCGUCCUCCUCCGGCUGACCUCCUUCUCAGCUGCUGACCG-GCGCCGCACAGGCGGCAUCUCAGCUUCGUGUGC-AAAAAGCCCGUC", "UUUUUGGGAUAUCGGGCAC--GGGUCCUCCUCCUCCGGCUGUUCUCCUUCACAGCUGUGACCCAUGUGCCACACAGGCGAU...
rfam_14_5_mafft
URS0000D691E7_12908_1-70
AGCACACGUCCUUAAUAGAAACGGCUUUAUGCCGGAGGUUGAAAAGCGGGGGCAAUUUCCGGCGUGUGCA
.(((((((((...........((((.....))))...(((....)))(((.......)))))))))))).
[ "URS0000D691E7_12908/1-70", "URS0000D6850B_476272/1-69", "URS0000D6850B_12908/1-69", "URS0000D66EC4_12908/1-69", "URS0000D68220_12908/1-70" ]
[ "AGCACACGUCCUUAAUAGAAACGGCUUUAUGCCGGAGGUUGAAAAGCGGGGGCAAUUUCCGGCGUGUGCA", "AGCACACGUCCUUAAAAGAAACGGCUCCG-GCCGGAGGUUGAAAAGCGGGCGCAAUUCCCGACGUGUGCA", "AGCACACGUCCUUAAAAGAAACGGCUCCG-GCCGGAGGUUGAAAAGCGGGCGCAAUUCCCGACGUGUGCA", "AGCACACGUCCUUAAAAGAAACGGCUCCG-GCCGGAGGUUGAAAAGCGGGCGCAAUUCCCGGCGUGUGCA", "AGCACACGUCC...
rfam_14_5_mafft
URS0000D691F5_12908_1-585
GUGAUAUAAUAUUUUUAUAUUCAAGUCGGUGAAGAUGGAUUAAUCAACCUGCCGACCAUUUUUCCGUGCUAAAUCGCUCGUUGUAACCUUUUGGGAUACUGGAUUGUUAUAGCGGUACGCAUUAGUGAUAAUGUAGUUGAAUAAAGUAAGUAGUCAACACUUUAAAGACGUUGGAGAAAUGACGGAAGUUGCCUUGAUGUAAAGUACGAUUAGGUAUAAGUGAUGAUAAUAGAUGGUAGUCAAAAGCUACAUGAAUCCUAUAAACCUGUUGCGUGAGAAACAAUAGUUAGGUAGGAAAUCUCAAAAUAAGUCACCACCAA...
......(((.(..(......(...(((((.......((.(.....).))..)))))...((((((.............((((((.((..(((((....)))))..)).))))))..((.(((((....)))))..))....(((((.............)))))........))))))........(.(.(............(..((((.(.(((((((((((............((((.....))))......((((((.(((..(((...[[[[....))).)))..))))))...]]]]......))))).[[[[[...
[ "URS0000D691F5_12908/1-585", "URS0000D65830_12908/1-585", "URS0000D6C342_12908/1-585", "URS0000D6C744_12908/1-585", "URS0000D69226_12908/1-585", "URS0000D676C3_12908/1-585", "URS0000D6C386_12908/1-585" ]
[ "GUGAUAUAAUAUUUUUAUAUUCAAGUCGGUGAAGAUGGAUUAAUCAACCUGCCGACCAUUUUUCCGUGCUAAAUCGCUCGUUGUAACCUUUUGGGAUACUGGAUUGUUAUAGCGGUACGCAUUAGUGAUAAUGUAGUUGAAUAAAGUAAGUAGUCAACACUUUAAAGACGUUGGAGAAAUGACGGAAGUUGCCUUGAUGUAAAGUACGAUUAGGUAUAAGUGAUGAUAAUAGAUGGUAGUCAAAAGCUACAUGAAUCCUAUAAACCUGUUGCGUGAGAAACAAUAGUUAGGUAGGAAAUCUCAAAAUAAGUCACC...
rfam_14_5_mafft
URS0000D691FC_12908_1-48
GACCUUCCCGGGAAUGGCUGGGAAGAAGGGCCGAACGGGGUCAACUUG
...((((((((......))))))))...((((......))))......
[ "URS0000D691FC_12908/1-48", "URS0000D6B9C3_12908/1-48" ]
[ "GACCUUCCCGGGAAUGGCUGGGAAGAAGGGCCGAACGGGGUCAACUUG", "GACCUCCCUGGGAAUGGCUGGGGAGAAGGACCGAACGGGGUCAACUUG" ]
rfam_14_5_mafft
URS0000D69208_12908_1-97
GUCAAACCCGCAGGAAGGUGGUCAUCCAGAGGUAAGAGUGGGCAAAGCCCACCGCCACCUUCCUCCUGCCAAAAGGCAGGUUUGCGGGGAAGGAGGC
......((((((((((((((((.............(.(((((.....)))))))))))))))..(((((......))))).))))))).........
[ "URS0000D69208_12908/1-97", "URS0000D65979_12908/1-96", "URS0000D67876_12908/1-97" ]
[ "GUCAAACCCGCAGGAAGGUGGUCAUCCAGAGGUAAGAGUGGGCAAAGCCCACCGCCACCUUCCUCCUGCCAAAAGGCAGG-UUUGCGGGGAAGGAGGC", "GUCAGUCCCGCAGGGAGAAGGUCAUCCA-AGGUAAGUGUGCCCAUAGGGCACCGCCUUCUCCCUCCUGCCAAAAGGCAGG-CUUGCGGGACAGGAGGU", "GUUAGUCCCGCAGGAGGAUGGUCAUCCA-AGGUAAGUGCGGACAAAGUCCGCCGCCAUCCUCCUCCUACCAAAAGGUAGGUUUUGCGGGACAGGAGGU" ]
rfam_14_5_mafft
URS0000D69211_12908_1-56
GGUUGGAUGAAUUUUUUAAUUCAUUUUCAAGAUCUGGCUUUUUAGGGUGGAAAGCU
..(((((((((........))))))..))).....(((((((.......)))))))
[ "URS0000D69211_12908/1-56", "URS0000D68C16_12908/1-55" ]
[ "GGUUGGAUGAAUUUUUUAAUUCAUUUUCAAGAUCUGGCUUUUUAGGGUGGAAAGCU", "GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGC-UUUUGGGGUGGAAAGCU" ]
rfam_14_5_mafft
URS0000D6922F_1233171_1-89
AGGUUUUGAAGUUGGAAAGAGUCCAAUACUCUACUUAAAGGUUUUAAGUAAUUGUGAGAGAUGCAGAAUUACUCGCUCUGCCAAACCUA
((((((.(..(((((...[[[[))))).(...((((((.....))))))........)....(((((...]]]]..)))))))))))).
[ "URS0000D6922F_1233171/1-89", "URS0000D6ADFE_1233170/1-88" ]
[ "AGGUUUUGAAGUUGGAAAGAGUCCAAUACUCUACUUAAAGGUUUUAAGUAAUUGUGAGAGAUGCAGAAUUACUCGCUCUGCCAAACCUA", "AGGUUUUGAAGUUGGAAAGGGUCCAAUACUCUACUUAAAGUUUUUAAGUAAUUGUGAGAGAUGCAGAAUUACUCGCUCUGCCAAACCU-" ]
rfam_14_5_mafft
URS0000D6923E_278963_1-77
GCUUUCAACAUCCCCGUCUCAGAGGCAAAGGACGGCGCUGAUGGUUUGGCGCUCGACGUCUCGGUGAGACUGAAGGC
(((((((........((((((.((((...(..(.....................).)))))...)))))))))))))
[ "URS0000D6923E_278963/1-77", "URS0000D6A468_12908/1-76", "URS0000D6875E_12908/1-36" ]
[ "GCUUUCAACAUCCCCGUCUCAGAGGCAAAGGACGGCGCUGAUGGUUUGGCGCUCGACGUCUCGGUGAGACUGAAGGC", "GCUUUCAACAUCCCCGUCUCAAGGACAAAAGACGGCGCCGUCUA-UCGGCUCCUGACGUCCUGGUGAGACUGAAGGC", "GCUUUCAACAUCCCCGUC-----------------------------------------CAUCAUUGGACUGAAGGC" ]
rfam_14_5_mafft
URS0000D69248_12908_1-93
GGGCCGGGAGAUCCUCCUUGGGAAGAGGGUCAAGAAUUGGUCUUCAUUAUCGUCUCAACUUUGCCCACCACUGGGUCCCCGACGGUGUGUGUG
(((((....(((((((........))))))).......)))))....................(.((((((((.........))))).))).)
[ "URS0000D69248_12908/1-93", "URS0000D6BC0F_12908/1-93", "URS0000D6CFAD_12908/1-93", "URS0000D679C6_12908/1-93", "URS0000D69626_12908/1-93", "URS0000D682EF_12908/1-93", "URS0000D6BAAD_12908/1-93", "URS0000D65C16_12908/1-93", "URS0000D6D0BE_12908/1-93", "URS0000D6A080_12908/1-93" ]
[ "GGGCCGGGAGAUCCUCCUUGGGAAGAGGGUCAAGAAUUGGUCUUCAUUAUCGUCUCAACUUUGCCCACCACUGGGUCCCCGACGGUGUGUGUG", "GGGCCGGGAGAUCCUCCUUGGGAAGAGGGUCAAGAAUUGGUCUUUAUUAUCGUCUCAACUUGGCCCACCACUGGAUUCCCGACGGUGUGUGUG", "GGGCCGGGAGAUCCUCCUUGGGAAGAGGGUCAAGAAUUGGUCUUUAUUAUCGUCUCAACUUUGCCCACCACUGGGUUCCCGACGGUGUGUGUG", "GGGCCGGGAGAUCCUCCU...
rfam_14_5_mafft
URS0000D6924B_12908_1-77
CCAGGAGUUUACUCUUGGACUUAUGGGGAAUACCAACCCCGUAGACCUAGAACGUCAAAAAGAGGAGAAAACAAAUG
((((((......))))))...(((((((........)))))))(((.......))).....................
[ "URS0000D6924B_12908/1-77", "URS0000D6C986_12908/1-77", "URS0000D69E26_12908/1-71" ]
[ "-----CCAGGAGUUUACUCUUGGACUUAUGGGGAAUACCAACCCCGUAGACCUAGAACGUCAAAAAGAGGAGAAAACAAAUG", "-----CCAAGAGUUUACUCUUGGACUUAUGGGGAAUACCAACCCCGUAGACCUAGAACGUCAAAAAAGGGAGAAAACAAAUG", "CCGUACAUAGAGU------ACGGACUUAUGGGGACAAC--ACCCCGUAGACCUAGAACGUCAAAA---GGAGAAAACAAAUG" ]
rfam_14_5_mafft
URS0000D69265_12908_1-57
AGCAGAGGGACGCCGGAAAGGUCCGGCGGUAAUGCACAAACCCGGUCCCGAGUCCGG
.(((..[[[.(((((((....)))))))....)))((....{{{..]]]..)).}}}
[ "URS0000D69265_12908/1-57", "URS0000D6978E_12908/1-56" ]
[ "AGCAGAGGGACGCCGGAAAGGUCCGGCGGUAAUGCACAAACCCGGUCCCGAGUCCGG", "-GCAGAGGGACGCCGGAAAGGUCCGGCGGUAAUGCGCAAACCCGGUCCCAAGUCCGG" ]
rfam_14_5_mafft
URS0000D69296_12908_1-129
GCUCUGUUGUCGAUGGGCAACAGGCCGACCAUGUGAGUGGUCAGCCGAUCACACCCGCUUCGGCAAAUACAUUGCAGGGGUCGGCCAUAAAGGGGGAGUAGCAACAUGAUUGUGAAACCCCUAGGCCGC
((.((((((((....)))))))))).((((((....))))))..............((....)).................(((((.....((((.....((.........))....))))..))))).
[ "URS0000D69296_12908/1-129", "URS0000D67093_12908/1-128" ]
[ "GCUCUGUUGUCGAUGGGCAACAGGCCGACCAUGUGAGUGGUCAGCCGAUCACACCCGCUUCGGCAAAUACAUUGCAGGGGUCGGCCAUAAAGGGGGAGUAGCAACAUGAUUGUGAAACCCCUAGGCCGC", "GCUCUGUUGUCGAUGGGCAACAGGCCGACCAUUUAAGUGGUCAGCCGAUCACACCUGCUUCGGCAAACACAUUGCAGGGGUCGGCCAU-AAGGGGGAGUAGCAACAUGAUUGUGAAAGCCCUAGGCCGC" ]
rfam_14_5_mafft
URS0000D692A3_12908_1-72
UAUUAUAGAAGAUAGAAAUAGUAGCUAUCGCCAUAAUUUAGGAAAUGUAGGGGUACUGUCCUACCUAUAAUA
((((((((..(((((...[[[[[.))))).(..........)....(((((..]]]]].)))))))))))))
[ "URS0000D692A3_12908/1-72", "URS0000D6B6AC_12908/1-72", "URS0000D66631_12908/1-72" ]
[ "--UAUUAUAGAAGAUAGAAAUAGUAGCUAUCGCCAUAAUUUAGGAAAUGUAGGGGUACUGUCCUACCUAUAAUA--", "--UAUUAUAGAAGAUAGAAAUAGUAGCUAUCGCCAUAAUUUAGGAAAUGUAGGGGUGCUGUCCUACCUAUAAUA--", "AAUAUUAUAG--GAUAGAAAUAGUAGCUAUCACCCAUAGUUAGGAGAUAUUGGGGUACUGACCAA--UAUAAUAUU" ]
rfam_14_5_mafft
URS0000D692AE_1079364_1-54
AACUCGAGUAGAAGCGGUCAGUGCCUAAAGAUGGCAUGGGACAUUGCUCUGGCG
.....(((((..........(((((.......))))).......))))).....
[ "URS0000D692AE_1079364/1-54", "URS0000D6B493_12908/1-49", "URS0000D6B11C_12908/1-52", "URS0000D6A1AA_69328/1-54", "URS0000D6CE6D_390235/1-53", "URS0000D69EA1_1215087/1-53", "URS0000D69EA1_931281/1-53", "URS0000D67EF1_12908/1-53", "URS0000D67EF1_390235/1-53", "URS0000D6745D_1196325/1-54" ]
[ "AACUCGAGUAGAAGCGGUCAGUGCCUAAAGAUGGCAUGGGACAUUGCUCUGGCG", "UUUCUGAGUAGAAGCGGUCAGGGCC-----AUGGCUCGGGACAUUGCUCGGGAG", "CUUUCGAGUAGAAGCGGUCAGUGCC--GAAAUGGGAUGGGGCAUUGCUCAGGCA", "CGGUCGAGUAGAAGCGGUCAGUGCCGGUGGACGGCAUGGGGCAUUGCUCUUGCG", "CCUUCGAGUAGAAGCGGUCAGUGCC-AGAAAUGGCAUGGGGCAUUGCUCUUGCG", "CCUGCGAGUAGAAGC...
rfam_14_5_mafft
URS0000D692BC_12908_1-911
CGGCUGAUUGGAAGAUUCUAGGAUAAUCCUGGGUGACUGGGAGAAAAGGGCUAGCUGGGCUGAUUGGCUGGCCCCCUUCAUGGCAGCAUGUUGAACCGAAUCUUCGGGUUCGUGGAGGCAGACUGCGGAAUUGGAGGCAGGAUUCACCAAGACCGCAGAGAUUGAUUUGACGCGGUUUCCGACUUCGGUUGGAGGCAGAGUAUCGGUUGGUUAGCUAAUGGAUGCUCGUGGAGGAGGAUCGAUCAAAGCAAACUGUAGACUUGGCCGCGAGGGGCGAAUUAGGAGCUGCCCCGUGCCCGGUUGAAUCAACAAUCGGGUCG...
...................................................................................................................................................................................................................................................................................................................................
[ "URS0000D692BC_12908/1-911", "URS0000D6936B_12908/1-898", "URS0000D6614A_12908/1-769", "URS0000D69A1A_12908/1-788" ]
[ "CGGCUGAUUGGAAGAUUCUAGGAUAAUCCUGGGUGACUGGGAGAAAAGGGCUAGCUGGGCUGAUUGGCUGGCCCCCUUCAUGGCAGCAUGUUGAACCGAAUCUUCGGGUUCGUGGAGGCAGACUGCGGAAUUGGAGGCAGGAUUCACCAAGACCGCAGAGAUUGAUUUGACGC-GGUUUCCGACUUCGGUUGGAGGCAGAGUAUCGGUU----------GGUUAGCUAAUGGAUGCUCGUGG-AGGAGGAUCGAUCAAAGCAAACUGUAGACUUGGCCGCGAGGGGC-GAAUUAGGAGCUGCCCCGUGCCCGGUU...
rfam_14_5_mafft
URS0000D692C2_12908_1-48
AUACGGAAUGCUGUAAGGGAGUGCUUUGCGCGCGGGCAGAAAAUAGGG
........((((........((((.....)))).))))..........
[ "URS0000D692C2_12908/1-48", "URS0000D659BB_12908/1-48", "URS0000D6A423_12908/1-48", "URS0000D6A423_1262781/1-48" ]
[ "AUACGGAAUGCUGUAAGGGAGUGCUUUGCGCGCGGGCAGAAAAUAGGG", "AUACGGAAUGCUGUAAGGGAGUGCUUUGCGCGCGGGCAGGAAACAGGG", "AUACGGAAUGCUGUAAGGGAGUGCUUUGCGCGCGGGCAGAAAACAGGG", "AUACGGAAUGCUGUAAGGGAGUGCUUUGCGCGCGGGCAGAAAACAGGG" ]
rfam_14_5_mafft
URS0000D692F2_243275_1-105
CAAGCGGUUUGUUUACAAACCGCAUACGAUAAACGAUGUUUGCCGUUUACGGCAAACUCGAAGAUAAACAGUGAGGCUGAAUUCCUGCCGAGCUGUUUAUCGUAC
.....(......)....................(((.((((((((....)))))))))))..((((((((((..((...........))..))))))))))....
[ "URS0000D692F2_243275/1-105", "URS0000D6CE28_243275/1-102", "URS0000D65E11_243275/1-100", "URS0000D6C922_243275/1-101", "URS0000D6A930_243275/1-102" ]
[ "CAAGCGGUUUGUUUAC-AAACCGCAUACGAUAA-ACGAUGUUUGCCGUUUAC-GGCAAACUCGAAGAUAAACAGUGAGGCUGAAUUCCUGCCGAGCUGUUUAUCGUAC", "-----AGUUUGUUCAC-AAACUGCAUACAAUAAUGCGAUGUUUUGUGCAAAGCACAAAACUCGAAGAUAAACAGUGAGGCUGAAUUUCUGCCGAACUGUUUAUCUUAC", "-----AGUUUGUUUAC-AAACUGCAUACAAUAAUGCGACGUUUGCCGAAAGG--CAAACUUGGCAGAUAAACAGUGAGGCUGAAUUC...
rfam_14_5_mafft
URS0000D692FE_12908_1-167
CAGGCCGGGGGUCUGGGGGUUGAAAGUCCAGGCCAGCUAUGGGCAAAAGGACCCACGUAAGCGCGGAGCAAGAGGCACGCGUGAUCAUGGCAUAGCUUAGAAGUAAGUCCUCGGGAAAAUCCCGGCAAAGGCAAGUGUGGGGGCAAAGACCCGGUCAGCCCGGCCUG
((((((.(((..((((((.(......(((..(((.[[[[[[)))....)))((((((...(((..............)))..........]]]]]].............(((((((...)))))....)).....))))))......).)))...))))))))))))
[ "URS0000D692FE_12908/1-167", "URS0000D67B62_12908/1-166", "URS0000D696C6_12908/1-161", "URS0000D668A5_12908/1-165", "URS0000D65806_12908/1-166", "URS0000D6CC64_12908/1-166" ]
[ "CAGGCCGGGGGUCUGGG-----GGUUGAAAGUCCAGGCCAGCUAUGGGCAAAAGGACCCACGUAAGCGCGGAGCAAGAGGCAC--GC-GUGAUCAUGGCAUAGCUUAGAAGUAAGUCCUCGGGAAAAUCCCGGCAAAGGCAAGUGUGGGGGCAAAGACCCGGUCAGCCCGGCCUG", "------AAGAGUCCGGGUCUGCGGUUGCAAGUCCAGGCCAGCUAUGGGCAAAAGGAUCCACGUAAGCCGUCAGCAAAGAUCU---GCGGUGAUCAUGGCAUAGCUUAGAUGUAAGUCCUCGGAAAAAUUCCGGC...
rfam_14_5_mafft
URS0000D69304_12908_1-215
ACCAUAGACAGAUGUAGAACUGCAAGACAAGUCCGCAUUUCCCUAUAUGGUUAUCAAUUUAGAAGCGAUGCCAAUAAGUGCUAUUGUAUUGGUGUUAUAUCGAAAUAGCAUGAGGUAUGGUGGAUGAGGUUAACCGUAGAACCUUUGGUUGAAAAACCCUAAAACUAAUCUAAGAAUACGACUUCUGAAUUUUCACUAUUUUUAGUUACGGUAGC
((((((...((((((.(.(((........))).))))))).....))))))...............(.((........((...(.....((......)).......)...)..)...)).).....(((((.[[[[[[.)))))..((((....))))...........(((((((((.(...............)))))))))).]]]]]]...
[ "URS0000D69304_12908/1-215", "URS0000D68FBD_12908/1-215", "URS0000D69CFD_12908/1-215", "URS0000D6806F_12908/1-215", "URS0000D6D14C_12908/1-215", "URS0000D67536_12908/1-215", "URS0000D69FE6_12908/1-215", "URS0000D6BB51_12908/1-215", "URS0000D6709C_12908/1-215", "URS0000D6C13A_12908/1-215" ]
[ "ACCAUAGACAGAUGUAGAACUGCAAGACAAGUCCGCAUUUCCCUAUAUGGUUAUCAAUUUAGAAGCGAUGCCAAUAAGUGCUAUUGUAUUGGUGUUAUAUCGAAAUAGCAUGAGGUAUGGUGGAUGAGGUUAACCGUAGAACCUUUGGUUGAAAAACCCUAAAACUAAUCUAAGAAUACGACUUCUGAAUUUUCACUAUUUUUAGUUACGGUAGC", "ACCAUAUACAGAUGUAGAACUGCAAGACAAGUCCGCAUUUCCCUAUAUGGUUAUCAAUUUAGAAGCGAUGCUAAUAAGUGCUAUUGUAUUGGUG...
rfam_14_5_mafft
URS0000D69310_12908_1-223
AUGAGAAUUGAUGGAUCGAGAGAUGAAGGUGCAUAGCGGGCAGGGAAAGAUAUAUGGCGGAUGGAUAAUAAACCACAAAGGGUGUCAAAGUCCUUAUCCUCAGAAGGCAAAAGAGGAGAUUAUGCUGAUUAAUAAUUAGUGUAUCGUGGACGCAUAUGCGACCAGACGGUAGUUCCAAGUAUGCUGGAGUAAUGGGGAUUCAUAGGAAUCACACAUACAUCUU
......(((.....(((....)))...)))...........................................(((.((((((......)))))).(((((...........)))))(((.((.(((((.....))))).))))))))..(((....)))..................(((((.............(((((....)))))...))))).....
[ "URS0000D69310_12908/1-223", "URS0000D69CF0_12908/1-223", "URS0000D68F67_12908/1-223", "URS0000D66100_12908/1-223", "URS0000D687BD_12908/1-223", "URS0000D6AE64_12908/1-223", "URS0000D6D349_12908/1-223", "URS0000D685B7_12908/1-223", "URS0000D6C1D3_12908/1-223", "URS0000D6C848_12908/1-223" ]
[ "AUGAGAAUUGAUGGAUCGAGAGAUGAAGGUGCAUAGCGGGCAGGGAAAGAUAUAUGGCGGAUGGAUAAUAAACCACAAAGGGUGUCAAAGUCCUUAUCCUCAGAAGGCAAAAGAGGAGAUUAUGCUGAUUAAUAAUUAGUGUAUCGUGGACGCAUAUGCGACCAGACGGUAGUUCCAAGUAUGCUGGAGUAAUGGGGAUUCAUAGGAAUCACACAUACAUCUU", "AUGAGAAUUGAUGGAUCGAGAGAUGAAGGUGCAUAGCGAGCAGGGAAAGAUAUAUGGCGGAUGGAUAAUAAACCACAAAGGGUGUC...
rfam_14_5_mafft
URS0000D69314_12908_1-86
GCCAGGAGAUGCCCAUGUGAUGAAGUCACAUAUAAAAAUGGCAUCGACGACAUCUCACAUUGCGGUGCAAUGUGAGAGUACCAACA
.......((((((.(((((((...)))))))........)))))).......((((.((..((...))..)).)))).........
[ "URS0000D69314_12908/1-86", "URS0000D69587_12908/1-86", "URS0000D67ECA_12908/1-86", "URS0000D691F9_12908/1-86" ]
[ "GCCAGGAGAUGCCCAUGUGAUGAAGUCACAUAUAAAAAUGGCAUCGACGACAUCUCACAUUGCGGUGCAAUGUGAGAGUACCAACA", "GCCAGGAGAUGACCAUGUGACGAAGUCACAUAUUAAAAUGGCAUCGACGACAUCACACAUUGCAGAGCAAUGUGUGAGUACCAAUA", "GCCAGGAGAUGACCAUGUGACGAAGUCACAUAUUAAAAUGGCAUCGACGACAUCACACAUUGCAGAACAAUGUGUGAGUAACAAUA", "GCCAGGAGAUGACCAUGUGACGAAGUCACAUAUUAAAAU...
rfam_14_5_mafft
URS0000D6931C_12908_1-82
AAACUCCGUACACGGGUUGGAUAUCCGAAAGGUUUUCAAACGCUUGCUGUUAUGCGUGGUUAGCCCUAAAUACGGAGUUUCA
(((((((((....((((((((...((....))..)))).((((..........)))).....)))).....)))))))))..
[ "URS0000D6931C_12908/1-82", "URS0000D6D043_12908/1-79", "URS0000D661C6_12908/1-82", "URS0000D661C6_470145/1-82", "URS0000D6675D_12908/1-82" ]
[ "AAACUCCGUACACGGGUUGGAUAUCCGAAAGGUUUUCAAACGCUUGCUGUUAUGCGUGGUUAGCCCUA-AAUACGGAGUUUCA", "-AGCUCCGAACACGGGCGGAUAAGCCGAAAGGUCUCCAA--CGCUGCUGUUAUGCGUGGUUAGCCCUACGGUUCGGAGCAUU-", "AAACUCCGUACAUGGGUUGAACAUCCGAAAGGUUUUCAAACGCUUGCUGUUAUGCGUGGUUAGCCCUA-AAUACGGAGUUUUA", "AAACUCCGUACAUGGGUUGAACAUCCGAAAGGUUUUCAAACGCUUGCU...
rfam_14_5_mafft
URS0000D6931D_12908_1-68
UGUCCUGUUGGAUGACGUAAAAAGCCACAACCAACUAAUCAGGUGGGAGCAACCCCGUAAAAAGCGUA
((((....[[[.[)))).....].]]]................((((......))))...........
[ "URS0000D6931D_12908/1-68", "URS0000D6B608_12908/1-59", "URS0000D65E0A_12908/1-56", "URS0000D65E0A_1262832/1-56", "URS0000D6670C_12908/1-56", "URS0000D6673E_12908/1-56", "URS0000D6CCFD_608534/1-68" ]
[ "--UGUCCUGUUGGAUGACGUAAAAAGCCACAACCAACUAAUCAGGUGGGAGCAACCCCGUAAAAAGCGUA", "UGCCUUGUGCCGGGCGUAAUAAAGGCAC-----------ACCGCUGGGAAGCAACCCCGUAAAAAGCGUA", "-----UGUCCGGAAUGACGUAAAA---------CUACCAGCACAAGGGAAGCAACCCCGUAAAAAGCGUA", "-----UGUCCGGAAUGACGUAAAA---------CUACCAGCACAAGGGAAGCAACCCCGUAAAAAGCGUA", "-----UGUCCG...
rfam_14_5_mafft
URS0000D69342_12908_1-89
CACCGGCAAGCGCAGGAAAGGUAGAGGCCGCUUCUUGCAAGUGGCAGCCCGAAUGGGUGGGAUCCUCGGUUCCUGGGGCCAUAGAUCAU
(...(((...(.((((....((.((((((((((.....)))))))..(((....))).......))).)).))))).)))...).....
[ "URS0000D69342_12908/1-89", "URS0000D6650D_12908/1-89", "URS0000D6BD42_12908/1-89", "URS0000D6CF01_12908/1-89" ]
[ "CACCGGCAAGCGCAGGAAAGGUAGAGGCCGCUUCUUGCAAGUGGCAGCCCG-AAUGGGUGGGAUCCUCGGUUCCUGGGGCCAUAGAUCAU", "CCAGGGUAAGCGCAGGAAAGGUAGAGGCCGCUCGUCGAGAGUGGCAGCCCA-AAUGGGUGGGAUCCUCGGUUCCUGGGACCCAUAAGUUU", "GUCGGGUAAGCGCAGGAGAUGUAGAGGCCGCUC-UCACGAGUGGCAGCCUGUAAUGGGUGGGAUCCUCGGUUCCUGGGACCCUUCAACUU", "GACGGGUAAGCGCAGGAUAUGUAGAGG...
rfam_14_5_mafft
URS0000D69353_12908_1-39
AUGGAGUAAGCUGAAAAUCCAAUAUUAAAAGAGUAAGCG
.((((....[[[.....))))..............]]].
[ "URS0000D69353_12908/1-39", "URS0000D6BDBA_525257/1-36", "URS0000D665F6_12908/1-35", "URS0000D665F6_857291/1-35", "URS0000D665F6_563031/1-35", "URS0000D6840E_12908/1-35", "URS0000D67965_12908/1-34", "URS0000D670AE_12908/1-38", "URS0000D68C70_12908/1-35", "URS0000D6AB71_700598/1-38" ]
[ "-AUGGAGUAAGCUGAAAAUCCAAUAUUAAAAGAGUAAGCG", "-AUGGCGGCAUCUGAAAAGCCA---UUAAAAGAGUAAGAA", "-AUAGAGGUAGCUGAAAAUCUA----UAAAAGAGUAAGCA", "-AUAGAGGUAGCUGAAAAUCUA----UAAAAGAGUAAGCA", "-AUAGAGGUAGCUGAAAAUCUA----UAAAAGAGUAAGCA", "-ACAGGGGAUGCUGAAAACCUA----UAAAAGAGUAAGCA", "-AUAGGAGAAGCUGAAAACCU-----UUAUAGAGUAGGC...
rfam_14_5_mafft
URS0000D69358_12908_1-48
AGGGCUGGUCGCGAGACCCUGGUCCAUCUUUAGGAGGGGAAGUAUCCC
.(((((((((....))))..))))).......................
[ "URS0000D69358_12908/1-48", "URS0000D65CFB_12908/1-47", "URS0000D65F78_12908/1-48" ]
[ "AGGGCUGGUCGCGAGACCCUGGUCCAUCUUUAGGAGGGGAAGUAUCCC", "CGGGCUGGUCGAAAGACCCUGGUCCAUCUUU-GGCGAGGAAGUUCCUC", "AGGGCUGGUCGCGAGACCCUGGUCCGUCUUUAGGAGGGGAAGUAUCCC" ]
rfam_14_5_mafft
URS0000D6935B_12908_1-615
UUCUGAAUAUCUUCAUAUACCGAACCGUGUGCAUAAAGCUCCUGACAGGGCUUCACGGACUGACGUGUGACGGAACGCCACCUAGACAGCUGAUAGGCUGCCUAAGGUAACAGAGCGUCUUAAAAGAGGGCAACUGAUUUUAAGGGAGUACGUAAGACACUUGGUACAACUUCAGGGCGUCAGGUGGGAUAGAAGGAUGAGGGAAAAGGCAGGAUGUUUGGGGCUGUUUCUGUAAAAUAGACGACCACGGUGUGGGAAUAACCGGUGAAUAUCAUAAGGCUUUGCAGGCUUAUGAGGAUAGCGGGAAAAAUGCAGGCAGA...
......(....(((......(...(((((......(((((........)))))))))).((((((..........(((....(((.(((((....))))).)))..........)))(((((.((..((....))..)).)))))..((((............))))..........))))))........(((((.....((.(..((..((((...(.(((((((((((.............((((...))))......((.((.....((((..(((..[[[[.))).)))).....)).)).....]]]]...)))...
[ "URS0000D6935B_12908/1-615", "URS0000D66926_12908/1-612", "URS0000D66101_12908/1-611" ]
[ "UUCUGAAUAUCUUCAU-AUACCGAACCGUGUGCAUAAAGCUCCUGACAGGGCUUCACGGACUGACGUGUGACGGAACGCCACCUAGACAGCUGAUAGGCUGCCUAAGGUAACAGAGCGUCUUAAAAGAGGGCAACUGAUUUUAAGGGAGUACGUAAGACACUUGGUACAACUUCAGGGCGUCAGGUGGGAUAGAAGGAUGAGGGAAAAGGCAGGAUGUUUGGGGCUGUUUCUGUAAAAUAGACGACCACGGUGUGGGAAUAACCGGUGAAUAUCAUAAGGCUUUGCAGGCUUAUGAGGAUAGCGGGAAAAAUGCA...
rfam_14_5_mafft
URS0000D69360_12908_1-88
UGUAGAAAAGGUGGAAAAAUUCGAUGCGUCCACACUCAAUUGAAAAAUUGAUAAGAGAUGAGGGAGAAAGCGUCGCCCUCUUUCUAUG
((((((((..(((((........[[[[.))))).(((((((....))))))...)....(((((.....]]]]..)))))))))))))
[ "URS0000D69360_12908/1-88", "URS0000D65807_12908/1-88", "URS0000D6AF57_12908/1-88", "URS0000D6C929_12908/1-88", "URS0000D680A3_12908/1-88", "URS0000D65F9F_12908/1-87" ]
[ "UGUAGAAAAGGUGGAAAAAUUCGAUGCGUCCACACUCAAUUGAAAAAUUGAUAAGAGAUGAGGGAGAAAGCGUCGCCCUCUUUCUAUG", "UGUAGAAAAGGUGGAAAAUUUCGAUGCGUCCACACUCAAUUGAAAAAUUGAUAAGAGAUGAGGGAGAAAGCGUCGCCCUCUUUCUAUG", "UGUAGAAAAGGUGGAAAAAUUCGACGCGUCCACACUCAACUGAAAAAUUGAUAAGAGAUGAGGGAGAAAGCGUCGCCCUCUUUCUAUG", "UGUAGAAAAGGUGGAAAAAUUCGACGCGUCCAC...
rfam_14_5_mafft