id
stringlengths
12
30
sequence
stringlengths
12
4.38k
secondary_structure
stringlengths
12
4.38k
aligned_ids
listlengths
1
10
aligned_sequences
listlengths
1
10
split
stringclasses
4 values
URS0000D6BFA5_12908_1-85
ACUAGCGCAAAGUUAGUUUAUGGGGACACCACCCCCGUACCUAGGAGAACUAGGAAUUGGACUUCUUGAAGAGAGAAAACAAAUG
((((((.....)))))).(((((((.......)))))))((((.......))))...............................
[ "URS0000D6BFA5_12908/1-85", "URS0000D6BC07_12908/1-82", "URS0000D65E5D_12908/1-82" ]
[ "-ACUAGCGCAAAGUUAGUUUAUGGGGACACCACCCCCGUACCUAGGAGAACUAGGAAUUGGACUUCUUGAAGAGAGAAAACAAAUG", "-ACUAGCGCAAAGUUAGUUUAUGGGGACACCA-CCCCGUACCUAGGAGAACUAGG-AUUGGACUUCUUGAAG-GAGAAAACAAAUG", "UGCCGGCA-AAAAACGGCUUAUGGGGACACCA-CCCCGUACCCAGGAGAACUGGG-AUAGGACUUCUUGAAG-GAGAAAACAAAUG" ]
rfam_14_5_mafft
URS0000D6BFAF_12908_1-67
CCUACGGACUGUCACACAAAUGAUAGUAACUCGAAUUUUAGUGAACUCAGACAGGUUGAACUAGGAA
((((....(((((.......(((.....(((...(..).)))....)))))))).......))))..
[ "URS0000D6BFAF_12908/1-67", "URS0000D6815E_12908/1-67" ]
[ "CCUACGGACUGUCACACAAAUGAUAGUAACUCGAAUUUUAGUGAACUCAGACAGGUUGAACUAGGAA", "CCUACGGACUGUCGUACUAACGAAAGUAGCUCGAAUUUUAGUGAACUCAGGCAGGUUGAACUAGGAA" ]
rfam_14_5_mafft
URS0000D6BFB3_1154829_1-66
ACCCGUAGUGAUAUGGGCGUAUGACUGAAAGCACAUCAUACGGCUUGGCAGAGCUUAAGAACUGUU
.((((((....))))))(((((((...........)))))))........................
[ "URS0000D6BFB3_1154829/1-66", "URS0000D6BFB3_486410/1-66", "URS0000D6ADB2_1154876/1-66", "URS0000D6ADB2_1154903/1-66", "URS0000D6ADB2_1309807/1-66", "URS0000D6ADB2_1154866/1-66", "URS0000D6ADB2_1154886/1-66", "URS0000D6ADB2_1154913/1-66", "URS0000D6ADB2_888745/1-66", "URS0000D67DA7_1321820/1-65" ]
[ "ACCCGUAGUGAUAUGGGCGUAUGACUGAAAGCACAUCAUACGGCUUGGCAGAGCUUAAGAACUGUU", "ACCCGUAGUGAUAUGGGCGUAUGACUGAAAGCACAUCAUACGGCUUGGCAGAGCUUAAGAACUGUU", "ACCCGUAGUGAUACGGGCGUAUGACUGAAAGCACAUCAUACGGCUUGGCAGAGCUUAAGAACUGUU", "ACCCGUAGUGAUACGGGCGUAUGACUGAAAGCACAUCAUACGGCUUGGCAGAGCUUAAGAACUGUU", "ACCCGUAGUGAUACGGGCGUAUGACUG...
rfam_14_5_mafft
URS0000D6BFB5_12908_1-121
UACACCCCUGACGGUUGAAACACCGUUUAAUCGCCCUUAUGGGAAGGAUGAGUGGAAAUAUAAGCCGAUGCAGACCAUCCCGUUCCGGCGGUCGUACCGGUAAGGAUGGAGGCGAAUAGAA
..(((....((((((......))))))...((.(((....)))...))...))).........(((........((((((....(..((....))...)....)))))).)))........
[ "URS0000D6BFB5_12908/1-121", "URS0000D6780D_12908/1-121" ]
[ "UACACCCCUGACGGUUGAAACACCGUUUAAUCGCCCUUAUGGGAAGGAUGAGUGGAAAUAUAAGCCGAUGCAGACCAUCCCGUUCCGGCGGUCGUACCGGUAAGGAUGGAGGCGAAUAGAA", "UACACCCCCGACGGUUGAAACACCGUUUAAUCGCCCUUAUGGGAAGGAUGAGUGGAAAUAUAAGCCGAUGCAGACCAUCCCGUUCCGGCGGUCGUACCGGUAAGGAUGGAGGCGAAUAGAA" ]
rfam_14_5_mafft
URS0000D6BFC3_883100_1-75
GCGCUGACCUGGCCCAUGCCCAGGAGCGCCAUUGCGCCGGACGAAUGCCCCUCGGGUGGGGCAAGCAACAUCGGC
(((....(((((.......)))))..)))......(((((.....((((((......)))))).......)))))
[ "URS0000D6BFC3_883100/1-75", "URS0000D690B9_1216976/1-73" ]
[ "GCGCUGACCUG-GCCCAUGCCCAGGAGCGCCAUUGCGCCGGACGAAUGCCCCUCGGGUGGGGCAAGCAACAUCGGC", "--GCAGAGCUACGGCCAUGCCCGUAGGUGCGAUUGAGCCGGG-GAACGCCCCACAGGUGGGGCGAGCAACAUCGGC" ]
rfam_14_5_mafft
URS0000D6BFD7_339670_1-70
GUCGAGCCUAGGUCGGCCACCCGAAAAAACCGGACACCUUCAUCGGCUGGCUCGGCGUUUUUCGUGAAGG
((((((((..((........)).......((((...[[[[[[))))..))))))))........]]]]]]
[ "URS0000D6BFD7_339670/1-70", "URS0000D6B74A_269482/1-66", "URS0000D69949_331271/1-68", "URS0000D663C5_271848/1-69", "URS0000D6CEFE_320373/1-68", "URS0000D658B5_441157/1-68", "URS0000D658B5_441154/1-68", "URS0000D658B5_536230/1-68", "URS0000D658B5_320374/1-68", "URS0000D658B5_441156/1-68" ]
[ "GUCGAGCCUAGGUCGGCCACCCGAAAAAACCGGACACCUUCAUCGGCUGGCUCGGCGUUUUUCGUGAAGG", "GUCAAGCCUAGGGCGGCCACCCG--AAUCCCGGAUUCCUUCACCGGCUGGCUUGACACCUUCCGAAGG--", "GUCGAGCCUAGGGCGGCCACCCG--AAAACCGGACACCUUCACCGGCUGGCUCGGCGCUCUUCGUGAAGG", "GUCGAGCCUAGGGCGGCCACCCG-AAAAACCGGACACCUUCACCGGCUGGCUCGGCGUUCUUCGUGAAGG", "GUCGAGUCUAG...
rfam_14_5_mafft
URS0000D6BFD8_12908_1-56
UGCCAUAAGGGUUUAUAGUAUUACAAACCCUUAUGGCAACCAUGUAGCAUGAAGCA
(((((((((((................)))))))))))..................
[ "URS0000D6BFD8_12908/1-56", "URS0000D69904_12908/1-51", "URS0000D668C1_12908/1-48", "URS0000D6B68F_12908/1-48", "URS0000D6ABAB_12908/1-49", "URS0000D65749_12908/1-50", "URS0000D68C53_12908/1-49", "URS0000D6C30A_12908/1-49", "URS0000D6BC94_12908/1-49", "URS0000D67D87_12908/1-49" ]
[ "-UGCCAUAAGGGUUUAUAGUAUUACAAACCCUUAUGGCA-ACCAUGUAGCAUGAAGCA", "GUUCCAUAAGGGUU---AGUAUU----ACCCUUAUGGAACAGUAUGUAGCAAGUAGCA", "-AUCCAUAAGGGUU---AGUAUU----ACCCUUAUGGAU-GAUA-GUAGCAUGUAGCA", "-GUCCAUAAGGGUU---AGUAUU----ACCCUUAUGGAU-GAUA-GUAGCAUGUAGCA", "-UGCCAUAAGGGAU---AGUAUU----ACCCUUAUGGCUACACAGGUAGCA-GUAGCA"...
rfam_14_5_mafft
URS0000D6C000_1402545_1-191
CAUCGCCAGCCGUGUGAGCGCCACGGCCCUCACACCAGCGCGAUUUUGAUUCUGGUCGUGCCGCUGGCUCACAAGGCCACCGUCAUGCGCACCAGGGGAACCGCCGGGCAUCGUCCCGGCAGGCCCUGCGCAGUCUCGCCACUGAUCGGCCUCGGCCUUCGGCAGCGCGACGUAGAUAGCACGACCUGGCG
...(((.....(((((((.((....)).)))))))....))).............((((((((.(((((.....))))).))...(((((....((((..((.(((((......)))))..))))))))))).((.(((..((((..(((....))).))))..))).))........)))))).......
[ "URS0000D6C000_1402545/1-191", "URS0000D69EAF_1051005/1-191", "URS0000D68E03_1402497/1-191" ]
[ "CAUCGCCAGCCGUGUGAGCGCCACGGCCCUCACACCAGCGCGAUUUUGAUUCUGGUCGUGCCGCUGGCUCACAAGGCCACCGUCAUGCGCACCAGGGGAACCGCCGGGCAUCGUCCCGGCAGGCCCUGCGCAGUCUCGCCACUGAUCGGCCUCGGCCUUCGGCAGCGCGACGUAGAUAGCACGACCUGGCG", "CAUCGCCAGCCGUGUGAGCGCCACGGCCCUCACACCAGCGCGAUUUUGAUUCUGGUCGUGCCGCUGGCUCACAAGGCCACCGUCAUGCGCACCAGGGGAACCACCGGGCAUCGUCCCG...
rfam_14_5_mafft
URS0000D6C005_12908_1-59
GGGUGUCACCGCAAAACGCGGGAGGGCAGGUUUAAUUCAGCGCAGGUCGGGCCGCCGCG
....(((.(((.......)))...))).............(((.(((......))))))
[ "URS0000D6C005_12908/1-59", "URS0000D699F8_643561/1-51", "URS0000D68733_887062/1-51", "URS0000D6CABE_94624/1-57" ]
[ "GGGUGUCACCGCAAAACGCGGGAGGGCAGGUUUAAUUCA--GCGCAGGUCGGGCCGCCGCG", "GGGUGUCGUCACA--------UGGGGUGCGGCAGGUUUA--GCGAAGGUCGGGCCGCCUCG", "GGGUGC--------GAUGCCGGUCGGCAUGGCAGGUACA--GCGCAGGUCGGGCCGCCGCG", "GGGUGUCGGC----CGCAACCUGCGGCAAGACAGGUUCAUUGCGCUGGUCGGGCCGCCACG" ]
rfam_14_5_mafft
URS0000D6C006_12908_1-107
UUUUUUGAAGAUCGGGUGUCUGCCAUCUACGUCCGGCAGUUCUCUUUCGCAGCUGCCGGCGGACACCGCACAGACGAUAUUUCGAUUAGUGUGCAAAAGAGCCAGUC
......(((.(((.((((((.(((.........((((.((........)).))))..))).))))))[[[[[[.[))).))).].]].]]]]...............
[ "URS0000D6C006_12908/1-107", "URS0000D69777_12908/1-107", "URS0000D66CED_718252/1-107", "URS0000D68689_12908/1-107", "URS0000D6B843_12908/1-107", "URS0000D66D41_12908/1-107", "URS0000D669F4_12908/1-107", "URS0000D65976_12908/1-107", "URS0000D67DF3_12908/1-107", "URS0000D65B52_12908/1-107" ]
[ "UUUUUUGAAGAUCGGGUGUCUGCCAUCUACGUCCGGCAGUUCUCUUUCGCAGCUGCCGGCGGACACCGCACAGACGAUAUUUCGAUUAGUGUGCAAAAGAGCCAGUC", "UUUUUGGAAUAUCGGGUGUCUGCCAUCCUCCUCCGGCUGUUCUCCUUCACAGCUGCCGGCAGACACCGCACAGGCGAUAUUCCGCUUCGUGUGCAAAAGAGCCCGUC", "UUUUUGGAAUAUCGGGUGUCUGCCAUCCUCCUCCGGCUGUUCUCCUUCACAGCUGUCGGCAGACACCGCACAGGCGAUAUUCCGCUUCG...
rfam_14_5_mafft
URS0000D6C010_12908_1-182
AUCAUCGCGCGAGUGCCACUCCACUACAUGGACUCGUGACGUCUAAAAAAGGAGGCAGUUCUACCGCGGACUUGCGGUGCGGCAGUGUGGAGACCUGUCGUAAUGCGGCUGCCAUGCAUACGGGGAGCCGCGAGUCGGGCAGUUGAUGAAGUUCGUGCCCGUCAAAGUCAAAUGGUAUGGCA
.......(((((((.(((..........)))))))))).........................((((.[[[[[))))((((((((.((....))))))))))..((((((.((.........)).))))))..(.((((((..(((......))))))))).).]]]]].............
[ "URS0000D6C010_12908/1-182", "URS0000D6AD52_12908/1-182" ]
[ "AUCAUCGCGCGAGUGCCACUCCACUACAUGGACUCGUGACGUCUAAAAAAGGAGGCAGUUCUACCGCGGACUUGCGGUGCGGCAGUGUGGAGACCUGUCGUAAUGCGGCUGCCAUGCAUACGGGGAGCCGCGAGUCGGGCAGUUGAUGAAGUUCGUGCCCGUCAAAGUCAAAUGGUAUGGCA", "AUCAUCGCACGAGUACCACUCCACUACAUGGACUCGUGACGUCUAAAAAAGGAGGCAGUUCUACCGCGGACUUGCGGUGCGGCAGUGUGGAGACCUGUCGUAAUGCGGCUGCCAUGCAUACGGGGAG...
rfam_14_5_mafft
URS0000D6C013_629258_1-72
GGCCCAUCUCUUGCUUUAGCAAUCGCACGGUAGCCAACGGCGGCUAUCACCUUUUUACGACAAAGACGUCGC
............................(((((((......)))))))........................
[ "URS0000D6C013_629258/1-72", "URS0000D66C60_1194406/1-71", "URS0000D6A6AC_1108968/1-71", "URS0000D6CB0C_629259/1-71", "URS0000D6CB0C_1194404/1-71", "URS0000D6CB0C_629266/1-71", "URS0000D6CB0C_1154758/1-71", "URS0000D6CB0C_1194423/1-71", "URS0000D6C6E2_1104682/1-71", "URS0000D6744B_573066/1-71" ]
[ "GGCCCAUCUCUUGCUUUAGCAAUCGCACGGUAGCCAACGGCGGCUAUCACCUUUUUACGACAAAGACGUCGC", "GGCCCAUCUCUUGCUUUAGCAAUCCCACGGUAGCCAACAGCGGCUAUCACC-CUUUACGACAAAGACGUCGC", "GGCCCAUCUCUUGCCUUAGCAAUCCCACGGUAGCCAACGGCGGCUAUCACC-CUUUACGACAAAGACGUCGC", "GGCCCAUCUCUUGCUUUAGCAAUCCCACGGUAGCCAACGGCGGCUAUCACC-CUUUACGACAAAGACGUCGC", "GGC...
rfam_14_5_mafft
URS0000D6C034_12908_1-135
UCAAUAAAUCUGAACAUUUUCGGUGGAAUACCACAGAAAACGAAUCGACUAAUCUUCUGUAAUGCUAUUAUGAGGAUUGCCCUUUGAGGUUUAUAGCGAUAGGUCGCCCUAUGGUCGGUUACAUGCUUUUGUUGA
((((((((........(((((..............)))))..(((((((.(((((((......[[[[[...)))))))..............]]]]].(((((....))))).))))))).......))))))))
[ "URS0000D6C034_12908/1-135", "URS0000D6B670_12908/1-131", "URS0000D68462_12908/1-135", "URS0000D6B04D_12908/1-135", "URS0000D67CC1_12908/1-135", "URS0000D684D8_12908/1-133", "URS0000D68888_12908/1-127", "URS0000D6A2BF_12908/1-134", "URS0000D6B782_12908/1-124", "URS0000D6619F_12908/1-124" ]
[ "UCAAUAAAUCUGAACAUUUUCGGUGGAAUACCACAGAAAACGAAUCGACUAAUCUUCUGUAAUGCUA-UUAUGAGGAUUGCCCUUUGAGGUUUAUAGCGAUAGGUCGCCCUAUGGUCGGUUACAUGCUUUUGUUGA", "UUCAAUGAACUGCUCACUUUUAAUUAAU---AUUAAAAGUUUGACUGACUAAUCUUCUGUAAUGCUA-UUAUGAGGAUUGCCCUUUGAGGCUUAUAGCGAUAGGU-GUCCUAUGGUUGGUCACAUGAUUCGUUGAA", "UCGAUGAAACUGAACCUUUUCGAUGGGAUGC...
rfam_14_5_mafft
URS0000D6C046_12908_1-56
CCGGGUCAACGCAGGCACCCCGGUAUGGCCAGGACGAGUCCCGUCCCAAGCGCUGC
((((((....[[[[..)))).))........(((((.....)))))......]]]]
[ "URS0000D6C046_12908/1-56", "URS0000D66A97_12908/1-52" ]
[ "CCGGGUCAACGCAGGCACCCCGGUAUGGCCAGGACGAGUCCCGUCCCAAGCGCUGC", "CCGGGUCUACGCAGACACCCGG---CAGUCAAGAUG-CCUUCGUCUCAAGCGCUGC" ]
rfam_14_5_mafft
URS0000D6C053_12908_1-84
UUUUGCGCGCUAUGGUGUGGGUAAGCGGAAACGCCCCAAUACUUUUAUUAUAUUUAGUAUAGGACACCUAAGGCGCGUUUAUUU
.(..(((((....((((((((...(((....)))))))((((..............))))....)))).....)))))..)...
[ "URS0000D6C053_12908/1-84", "URS0000D6690A_12908/1-76", "URS0000D6BBDC_12908/1-76", "URS0000D671C6_12908/1-76", "URS0000D6B941_12908/1-76", "URS0000D6B2A8_12908/1-76", "URS0000D685A6_12908/1-83", "URS0000D6C79C_12908/1-83", "URS0000D67D33_12908/1-83", "URS0000D664DF_12908/1-73" ]
[ "UUUUGCGCGCUAUGGUGUGGGUAAGCGGAAACGCCCCAAUACUUUUAUUAUAUUUAGUAUAGGACACCUAAGGCGCGUUUAUUU", "--UUGCACGCUAUGGUGU-GGAAAGCGGAAACGCCCCAAUGCCUUGU---UGUAAGGCAUAGGACACCUAAGGCGUGCCUUU--", "--UUGCACGCUAUGGUGU-GGAAAGCGGAAACGCCCCAAUGCCUUAC---UAUAUGGCAUAGGACACCUAAGGCGUGCCUUU--", "--UUACACGCUAUGGUGU-GGCAAGCGGAAACGCCCCAAUGCUUU...
rfam_14_5_mafft
URS0000D6C07A_12908_1-110
AAAGCGUGAGGAUAGAAAAGCGUCGGCUAUUGCGGACUAUGAAAUAGUCUCAAGUGUAGAAGAUUAUUAAUCUUUGAUGAGAUGUUGGAAGUGAUGCCCAACCACGCCUA
.(.(((((..(((((.....[[[[[.))))).(((((((.....))))))............................)....(((((...]]]]].)))))))))).).
[ "URS0000D6C07A_12908/1-110", "URS0000D67BD9_12908/1-109", "URS0000D663A1_12908/1-109", "URS0000D6B696_12908/1-109", "URS0000D6B763_12908/1-110", "URS0000D6725D_12908/1-110" ]
[ "AAAGCGUGAGGAUAGAAAAGCGUCGGCUAUUGCGGACUAUGAAAUAGUCUCAAGUGUAGAAGAUUAUUAAUCUUUGAUGAGAUGUUGGAAGUGAUGCCCAACCACGCCUA", "AAAGCGUGAGGAUAGAAAAGCGUCGGCUAUCGCGGACCCUUAUG-GGUCUCAAGUGUAGAAGAUUAUUAAUCUUUGAUGAGAUGCUGGAAGUGAUGCCCAACCACGCCUA", "AAAGCGUGAGGAUAGAAAAGCGUCGGCUAUCGCGGACCCUUAUG-GGUCUCAAGUGUAGAAGAUUAUUAAUCUUUGAUGAGAU...
rfam_14_5_mafft
URS0000D6C083_12908_1-53
AUGUGAUACCGGGCCCCUCUGACGGCUGCCAAGCCGCCAUGUCGGAUCACUGU
.....((.((((..........(((((....))))).....))))))......
[ "URS0000D6C083_12908/1-53", "URS0000D6CF41_390235/1-53", "URS0000D6C083_351746/1-53", "URS0000D6C083_76869/1-53", "URS0000D6A700_390235/1-53" ]
[ "AUGUGAUACCGGGCCCCUCUGACGGCUGCCAAGCCGCCAUGUCGGA-UCACUGU", "UUGUGACGCCGGGCCCCUCUGACGGUUAGCA-GCCGCCAUGUCGGAGUCAUAGU", "AUGUGAUACCGGGCCCCUCUGACGGCUGCCAAGCCGCCAUGUCGGA-UCACUGU", "AUGUGAUACCGGGCCCCUCUGACGGCUGCCAAGCCGCCAUGUCGGA-UCACUGU", "AUGUGAUACCGGGCCCCUCUGACGGCUACCGCGCCGCCAUGUCGGA-UCACUGU" ]
rfam_14_5_mafft
URS0000D6C084_12908_1-111
UGGCGAUGAAGCAGUGGACUGGUUCGGUAUCAGCCGAUUGUAGAGCCAGACCAUGGGUUGAGCAUGAACCACAAGCCGAAUAGACCACAGGGUCGAAAGAAAACGCUAUAA
((((......(((((.(.(((..[[[[...))).).)))))...)))).............((............]]]]...((((....))))..........)).....
[ "URS0000D6C084_12908/1-111", "URS0000D6AE66_12908/1-111" ]
[ "UGGCGAUGAAGCAGUGGACUGGUUCGGUAUCAGCCGAUUGUAGAGCCAGACCAUGGGUUGAGCAUGAACCACAAGCCGAAUAGACCACAGGGUCGAAAGAAAACGCUAUAA", "UGGCGAUGAAGCAGUGGACUGGUUCGGUAUCAGCCGAUUGUGGAGCCAGACCAUGGGUUGAGCAUGAACCACAAGCCGAAUAGACCACAGGGUCGAAAGAAAACGCUAUAA" ]
rfam_14_5_mafft
URS0000D6C086_12908_1-74
CCUCUGGACUACUACAUCAAACCUAAGUAGGUUGUUAGUAAUAACUUCCAAACAGGAGUAGGAUGAAUGAGGAA
((((....(((((........(((.....((..((........))..))....)))))))).......))))..
[ "URS0000D6C086_12908/1-74", "URS0000D68E01_12908/1-62" ]
[ "CCUCUGGACUACUACAUCAAACCUAAGUAGGUUGUUAGUAAUAACUUCCAAACAGGAGUAGGAUGAAUGAGGAA", "CCUCUGGACUGUCAUA-CAAACCUAAGUAG--CAUUAGCG---------AAAAAGGGAUAGGAUGAACGAGGAA" ]
rfam_14_5_mafft
URS0000D6C0A8_12908_1-98
AUAAUGAUACUCCUGCUCAGUCACAAGUCGAGCGUGAUAAAACCGUCGCAACUAAUGAGAGCAGCUCGGAUGAACUCGGAGAGGUGAGACUCCUGUGG
............((((((........................................))))))(((.((.....)).)))(((.......)))....
[ "URS0000D6C0A8_12908/1-98", "URS0000D68569_12908/1-97", "URS0000D65920_12908/1-98", "URS0000D6CBC2_12908/1-98", "URS0000D65EF8_12908/1-98", "URS0000D65F46_12908/1-98", "URS0000D6A647_12908/1-98" ]
[ "AUAAUGAUACUCCUGCUCAGUCACAAGUCGAGCGUGAUAAAACCGUCGCAACUAAUGAGAGCAGCUCGGAUGAACUCGGAGAGGUGAGACUCCUGUGG", "AUAAUGAUACUUCUGUCCAGUCACAGUCCGAGCGUGAUAAAACCGUCGCAGGCAAUGAGGGCAGCUCGG-UGGAAACGGAGUGGUGAGAUUCCAAUGA", "AUAAUGAUACUCCUGCUCAGUCACAAGUCGAGCGUGAUAAAACCGUCGCAACUAAUGAGAGCAGCUCGGAUGAAUUCGGAGAGGUGAAACUCCUGUGG", "AUA...
rfam_14_5_mafft
URS0000D6C0AA_12908_1-104
CGGAACUUAAUAAGGCAAUGCGUUGCCGAAAUCGUCUGUAAUCCGGACAGCCGCACACAUGCGGUGGCGACUUCGUCUUUCUGCUGCGUCCAUGCAGCCUCUCA
.............(((((....)))))....(((((..............(((((....))))).)))))............(((((......)))))......
[ "URS0000D6C0AA_12908/1-104", "URS0000D69144_12908/1-101", "URS0000D6A0F9_12908/1-103", "URS0000D6C05E_12908/1-99" ]
[ "CGGAACUUAAUAAGGCAAUGCGUUGCCGAAAUCGUCUGUAAUCCGGACAGCCGCACACAUGCG--GUGGCGACUUCGUCUUUCUGCUGCGUCCAUGCAGCCUCUCA", "CGGAUCUU-AUAAGGCAGCACGCUGCCGAAAUCGUCUGCAAUCCGGGU-GCCGCACAUAUGCG--GUGACGACCAUUCUCUUCUACCGUCGCAUGACGGCUCUCU-", "CGGAACUU-AUAAGGCAGCGUGCUGCCGAAAUCGUCUGCAAUCCGGACAGCCGCACAUAUGCG--GUGACGACACUUCUCUUCUGCCGUCG...
rfam_14_5_mafft
URS0000D6C0AE_12908_1-77
ACAAUGAUACUUCGGCUUGGCUUAACAUGAUGUUGAGGAGUCGCUCGGCUAAUAGCGGAGAGGUGAAAUUCCUAUGU
............((((((...................))))))(((.(((...))).)))(((.......)))....
[ "URS0000D6C0AE_12908/1-77", "URS0000D68861_12908/1-65", "URS0000D665DC_12908/1-66", "URS0000D65E71_12908/1-77", "URS0000D6CDB3_12908/1-77", "URS0000D6A3FC_12908/1-77", "URS0000D698FE_12908/1-77", "URS0000D6831D_12908/1-77", "URS0000D65E18_12908/1-77", "URS0000D69A78_12908/1-77" ]
[ "ACAAUGAUACUU--------------CGGCUUGGCUUAACAUGAUGUUGAGGAGUCGCUCGGCUAAUAGCGGAGAGGUGAAAUUCCUAUGU", "AUAAUGAUACAUCUAUUAGUUGAAGUCGGCUCAUC-UAAAAAGAGGC-------------------------GAAGGUGAAAUUCCUAUGU", "AUAAUGAUACUUCUAACAGUUGAUGCCAGCUCGUCUUAAUAAGGGGU-------------------------GGAGGUGAAAUUCCUAUGU", "AUAAUGAUACUU------------...
rfam_14_5_mafft
URS0000D6C0B0_12908_1-49
CGGGGAAAAGCAGGCUCCCCGUCAGACGGUCGAACCGUUCAAGCUCUGC
((((((...[[[[[.))))))...(((((.....))))).....]]]]]
[ "URS0000D6C0B0_12908/1-49", "URS0000D656FA_12908/1-48", "URS0000D6BC11_1037409/1-45", "URS0000D67EC2_12908/1-49", "URS0000D6982A_12908/1-49", "URS0000D664B9_12908/1-48", "URS0000D6A324_12908/1-49", "URS0000D69A5E_12908/1-48", "URS0000D6BFA6_12908/1-49" ]
[ "-CGGGGAAAAGCAGGCUCCCCGUCAGACGGUCGAACCGUUCAAGCUCUGC", "UGGGGACUAGCAGGCUCCCCCGUCAGACAGUUU--CCGUCCAAGCUCUGC", "UGGGGACGAAGCAGACUCCCCGUGAGA----CC-UCGGUCCAAGCUCUGC", "-CGGGGGAACGCAGGCUCCCCGGCAGGCGGCCAUACCGUCCAAGUUCUGC", "-CGGGGAAAUGCAGACUCCCCGUCAGACGGUUUUUCCGUCCAAGCUCUGC", "CGGGGACAAAGCAGGCUCCCCGCCAGACGGCCU--...
rfam_14_5_mafft
URS0000D6C0B1_12908_1-76
CAAACAUGAAGGUGGAACAGGUAUCCACCACCUAGUGAAAACUAUAGGAGAUGCAGAUUACCACCUGCCAUGUUUA
.(((((((..(((((....[[[[.))))).(.((((....))))...)....((((..]]]]..))))))))))).
[ "URS0000D6C0B1_12908/1-76", "URS0000D6D1A0_12908/1-67" ]
[ "CAAACAUGAAGGUGGAACAGGUAUCCACCACCUAGUGAAAACUAUAGGAGAUGCAGAUUACCACCUGCCAUGUUUA", "AACUGAUGAAGUUGGAACAGGUAGCCAACACCU---------UUAUGGAGAUGCAGAUUACCACCUGCCAUCAGUU" ]
rfam_14_5_mafft
URS0000D6C0BF_12908_1-74
CAACAGGCUAACCCGACGGGGGACAAGCGGAAAUGCCUUGCCGCCUGCCUGUUGAUUUACAUACAUUUCAAGGC
((((((((...(((....))).....((((....[[[[[[))))..))))))))..............]]]]]]
[ "URS0000D6C0BF_12908/1-74", "URS0000D6C657_12908/1-73", "URS0000D6CE1E_12908/1-71", "URS0000D6B05A_12908/1-71" ]
[ "CAACAGGCUAACCCGACGGGGGACAAGCGGAAAUGCCUUGC-CGCCUGCCUGUUGAUUUACAUACAUUUCAAGGC", "CAACAGGCUAGACCGAUCAUCGAAAAGCGGAAAUGCCUUGC-CGCCUGCCUGUUGAUUUACAUACA-UUCAAGGC", "CAACAGGCUUACCCGACGGGGGACAAGCGUAAUUCCAUGAUACGCCUGCCUGUUGUUUU---UAUAAAUCAUGG-", "CAACAGGCUAACCCGACGGGGGACAAGUGCAAUUCCAUGAUGCACCUGCCUGUUGUUUU---UAUAAAUCAU...
rfam_14_5_mafft
URS0000D6C0C3_12908_1-125
UCAAAUAAUCUAACAACUUUCCUAGAAAGUCGAUUAAUUAAUCUUCAUUGAAGCUAUUAAGAGGAUUGCCCUUUGAGGUUGUAGCAAUAGUCAGUCGCACUAUGGUUAAUCAAUGCAUUAUUUGA
(((((((((......(((((.....))))).(((((((.(((((((......[[[[[...))))))).............]]]]].(((((.......))))).))))))).....)))))))))
[ "URS0000D6C0C3_12908/1-125", "URS0000D68B67_1262969/1-123" ]
[ "UCAAAUAAUCUAACAACUUUCCUAGAAAGUCGAUUAAUUAAUCUUCAUUGAAGCUAUUAAGAGGAUUGCCCUUUGAGGUUGUAGCAAUAGUCAGUCGCACUAUGGUUAAUCA-AUGCA-UUAUUUGA", "UAGAUAAAUCUGAAAACUUUCCUAGAAAGUGGACUAAUUAAUCUUCUGUGAAGCUAUUAUGAGGAUUGCCCUUUGAGGUUAUAGCAAUAG---GUCGCCCUAUGAUUAGUCACAUGCAUUUAUUUG-" ]
rfam_14_5_mafft
URS0000D6C0C7_12908_1-94
GUGUCGAGAGGCCGUCAUUGGGACGACGGCCAAGAAUGGACCGUAAUCUGUUAUCUCGGAGGGAUGUGGUGCUGGAACCCCGACAGCAGGCACA
..(((....(((((((........))))))).......))).......................((((.(((((.........)))))..))))
[ "URS0000D6C0C7_12908/1-94", "URS0000D695F1_12908/1-93", "URS0000D6824C_12908/1-94" ]
[ "GUGUCGAGAGGCCGUCAUUGGGACGACGGCCAAGAAUGGACCGUAAUCUGUUAUCUCGGAGGGAUGUGGUGCUGGAACCCCGACAGCAGGCACA", "-UGUCGAGAGGCCGUCAUUGGGACGAGGGCCAAGAAUGGACCGUGAUCUGUUAUCUCGGAGGGAUGUGGUGCUGGAACCCCGACAGCAGGCACA", "GUGUCGAGAGGCCGUCAUUGGGACGAGGGCCAAGAAUGGACCGUAAUCUGUUAUCUCGGAGGGAUGUGGUGCUGGAACCCCGACAGCAGGCACA" ]
rfam_14_5_mafft
URS0000D6C0CF_12908_1-71
UGUUGCAACAGCCCCGUGGAUUGGGAGGAUCGGCCAGAUGAGGCCGGUCCUCAAGUGAGUCCGCUGCAACG
(((((((........(((((((..(((((((((..........))))))))).....))))))))))))))
[ "URS0000D6C0CF_12908/1-71", "URS0000D6700D_12908/1-69" ]
[ "UGUUGCAACAGCCCCGUGGAUUGGGAGGAUCGGCCAGAUGAGGCCGGUCCUCAAGUGAGUCCGCUGCAACG", "UGUUGCAACAUCCCCGUGGGUUGGGGGAACGGCAGAGCUUAGGGCCGUCUC--AGUGAAUCCACUGCAACA" ]
rfam_14_5_mafft
URS0000D6C0D0_12908_1-58
CGAUCGAGUUUGUCACUGUCAUUACCCUCACGUUAGGAUAUGGGAAUACUGGUGUUGA
.......(((.((.....((((...(((......)))..))))....)).))).....
[ "URS0000D6C0D0_12908/1-58", "URS0000D6AB34_525362/1-56" ]
[ "CGAUCGAGUUUGUCACUGUCAUUACCCUCACGUUAGGAUAUGGGAAUACUGGUGUUGA", "--ACCGAGUUUGUCACUGUCAUUACCCUCACGUUAGGAUAUGGGAAUACUGGUGUUGA" ]
rfam_14_5_mafft
URS0000D6C0D2_12908_1-120
GGCGACGAGGGAAGUGUUGAUCCGGGCCGCCCCCACCGACCCCUCCUCGGAGGGGGCACGGAGAAAGAUCGGUCGCCGAGGUGGCCCGGGGAGCGAGUGGCGAGACCGACCCGACCAGCA
.((.....(((..((......((((((((.........................................[[[[[[[....))))))))...))....]]]]]..]]..))).....)).
[ "URS0000D6C0D2_12908/1-120", "URS0000D69BAB_12908/1-114" ]
[ "GGCGACGAGGGAAGUGUUGAUCCGGGCCGCCCCCACCGACCCCUCCUCGGAGGGGGCACGGAGAAAGAUCGGUCGCCGAGGUGGCCCGGGGAGCGAGUGGCGAGACCG-ACCCGACCAGCA", "CCUCCGGGGGAAAGUAACGAUCCGAGCAGCCCACACCGACGCAUCC-----AUGCGCACGGAGACAGA-CGGUCGCCUAGGCGGCUCGGGGAGCGAGUGGCGAGACCGAACCCGCCCAGC-" ]
rfam_14_5_mafft
URS0000D6C0D3_12908_1-61
GGCCUACCUGCGGGCCUAACAAUGCAGGGCGGUGGGAGAUGGCGACCUCCUAAAACGCCUA
((((...[[[[[))))......]]]]].......((((........))))...........
[ "URS0000D6C0D3_12908/1-61", "URS0000D6BA59_12908/1-61", "URS0000D6BA5B_12908/1-61", "URS0000D6CE4A_12908/1-61", "URS0000D6C5B1_12908/1-60" ]
[ "GGCCUACCUGCGGGCCUAACAAUGCAGGGCGGUGGGAGAUGGCGACCUCCUAAAACGCCUA", "GGUCUACCUGCGGACCUAAGAAUGCAGGACGGUGGGAGCUGGCGACCUCCUAAAACGCCUA", "GGUCCACCUGCGGACCUAACAAGGCAGGACGGCGGGAGACGGCGACCUCCUAAAACGCCUA", "GGUCCACCUGCGGACCUAACAAUGCAGGACGGCGGGAGAUGGCGACCUCCUAAAACGCCUA", "GGCCUAUCUGCGGGUCUAA-AACGCAGGGCGGCGGGAGCUGGCAACC...
rfam_14_5_mafft
URS0000D6C0E5_12908_1-64
CGCAGAGAGCAAGAGGCUUCUAAAAUGAAGCUCUUGGAAUGCGGCAGACCGGUCUCAAGCCCGG
((((..[[[((((((.((..........))))))))...))))((...{{{..]]]..)).}}}
[ "URS0000D6C0E5_12908/1-64", "URS0000D67A50_12908/1-54" ]
[ "CGCAGAGAGCAAGAGGCUUCUAAAAUGAAGCUCUUGGAAUGCGGCAGACCGGUCUCAAGCCCGG", "CGCAGAGUGACGGGGCUUU----------GCCCCGGUAAUGCGGCAGACCGGCCACAAGCCCGG" ]
rfam_14_5_mafft
URS0000D6C0E8_12908_1-130
UGGCACGGUACGAUUCCGUGGGGCGGGCUUCCCGCCUAACGCUUAGUCCCCAUAAUGGCGAAGGUAAGUGAGGAGGCGUCCAAAAUCUGAAAGCUGUUAUGGGGCGUGGCCGACUACGAGAGUGCCGGGG
...(((((.......)))))((((((.....))))))..........(((((((..(((..(((.......(((....)))....)))....)))..)))))))......((.(.((....))).))...
[ "URS0000D6C0E8_12908/1-130", "URS0000D6991F_12908/1-130" ]
[ "UGGCACGGUACGAUUCCGUGGGGCGGGCUUCCCGCCUAACGCUUAGUCCCCAUAAUGGCGAAGGUAAGUGAGGAGGCGUCCAAAAUCUGAAAGCUGUUAUGGGGCGUGGCCGACUACGAGAGUGCCGGGG", "UGGCACGGUACGAUUCCGUGGGGCGGGGUUCCCGCCUAACGCUUAGACCCCAUAAUGGUGAGGGUAAGUGAGGAGGCAUCCAAAAUCUGAAAACCAUUAUGGGGCGCAGCCGACUGCGAGAGUGUCGGGG" ]
rfam_14_5_mafft
URS0000D6C10F_12908_1-119
AAACUUCUGCAAUAGGGUUUAGUAUAUUGCAUCUCUUAAAUCGAGAUUAAUUGCUUUGCAGAUAGCAGUAAUAUAUAUGACCUUGUCGUAAUCGAUUACAUCGAUUCUCAAUUUUUUCU
.....((((((..[[[.[[..[[[[[[[[......................[[[[.)))))).]]]].]]]]]]]]..]].]]]......((((((...))))))..............
[ "URS0000D6C10F_12908/1-119", "URS0000D69F2F_12908/1-104" ]
[ "AAACUUCUGCAAUAGGGUUUAGUAUAUUGCAUCUCUUAAAUCGAGAUUAAUUGCUUUGCAGAUAGCAGUAAUAUAUAUGACCUUGUCGUAAUCGAUUACAUCGAUUCUCAAUUUUUUCU", "AAACAUCUGCAGUGGGAUUUCGUAUAUUACGUGUU--------------AUAGUCUGGCAGGUGGCUGUAAUAUAUAUGAUCUUGUCGUAAUCGA-UAAAUCGAUUCUCAAUUUGUUCU" ]
rfam_14_5_mafft
URS0000D6C117_12908_1-128
GCUUUGGCACGGCUACGGCCUGCCAAGCCGACCUCAAAACGUGGUCAGCCCGGUUAUCCUGCUUCGGCAAACAACCUGCUGGGUCUGGCAGAACGUGGAGUAGCCCUAGGGCGGAACACGGAGCCAGC
((.((((((...(....)..)))))))).((((.(.....).)))).............(((....)))...............(((((....((((.....((......))....))))..))))).
[ "URS0000D6C117_12908/1-128", "URS0000D659A1_12908/1-128", "URS0000D6AE0A_12908/1-128" ]
[ "GCUUUGGCACGGCUACGGCCUGCCAAGCCGACCUCAAAACGUGGUCAGCCCGGUUAUCCUGCUUCGGCAAACAACCUGCUGGGUCUGGCAGAACGUGGAGUAGCCCUAGGGCGGAACACGGAGCCAGC", "GCUUUGGCACGGCUACGGCCUGCCAAGCCGACCUCAAAACGUGGUCAGCCCGGUUAUCCUGCUUCGGCAAACAACCUACUGGGUCUGGCAGAACGUGGAGUAGCCCUAGGGCGGAACACGGAGCCAGC", "GCUUUGGCACGGCUACGGCCUGCCAAGCCGACCUCAAAACGUGGUCA...
rfam_14_5_mafft
URS0000D6C118_12908_1-155
UUAGUUUCUUUUAUGUCCUGGCAACCGAAAGGAAACUUUUGAGAAGCUGGGUUAUACGCUCUUUUACGAGGGCAACUUAGUUGUCAUAAAAUACAACCAUAACCCCUAAUGUGUGAAAUGGUGGUGAGAACCAAUAAGUGAAAGAGCUAUGCUCU
((((((((((..............................)))))))))).......((((((((((............................(((((..(.(.......).)..)))))...............))))))))))........
[ "URS0000D6C118_12908/1-155", "URS0000D6B98D_12908/1-137", "URS0000D68A1A_12908/1-134" ]
[ "UUAGUUUCUUUUAUGUCCUGGCAACCGAAAGGAAACUUUUGAGAAGCUGGGUUAUACGCUCUUUUACGA-GGGCAACUUAGUUGUCAUAAAAUACAACCAUAACCCCUAAUGUGUGAAAUGGUGGUGAGAACCAAUAAGUGAAAGAGCUAUGCUCU", "----------------CCUGGCAACCGUAGG--UGACUAUGAGAAGCUGGGUUAUACGCACUUCCACGAUAGACAACUAUGUUGUCAUAAAAUACAGCCAUGACACCCAAUGUGUGAAAUGGUGGUGAAGA-AAAUAAGUGGAAGAGCUAUGC...
rfam_14_5_mafft
URS0000D6C11E_12908_1-152
AGCCAUCAAGGUGUUCAUCCACUGAUCAAGGAUGAUUCCAGAACAUUUUGAGGGGCAACUAAACACUACAGCCGACCACUGGAAUGGUUGGCCAGGACUGAAAUGAGGAUUCAUUUUCAGAUGGCCAGCUAUGCCUAUUUUGCAGUGGGUCC
..((.(.((.((((((((((.........))))).[[[[[[))))))).).))...............(.((.(....]]]]]]....(((((........(((((....))))).......)))))...............).)).)....
[ "URS0000D6C11E_12908/1-152", "URS0000D67E61_12908/1-150" ]
[ "AGCCAUCAAGGUGUUCAUCCACUGAUCAAGGAUGAUUCCAGAACAUUUUGAGGGGCAACUAAACACUACAGCCGACCACUGGAAUGGUUGGCCAGGACUGAAAUGAGGAUUCAUUUUCAGAUGGCCAGCUAUGCCUAUUUUGCAGUGGGUCC", "--CCAUCAAAGUGUUCAUCCACUGAUCAAGGAUGAUUCCAGAACAUUUUGAGGGGCAACUAAACACUACAGCCGACCACUGGAAUGGUUGGCCAGGACUGAAAUGAGGAUUCAUUUUCAGAUGGCCAGCUAUGCCUAUUUUGCAGUGGGUCC" ]
rfam_14_5_mafft
URS0000D6C124_642492_1-87
AGACUAUAAGGGGUGCAGGGAAAGUAUUUCCUGCCGUAUUCAGGAGGGUGCUCAGCUGACAUGUUUUUUGUCAGCGCCGCAGGGAAC
..............((((((((....))))))))....................(((((...........)))))............
[ "URS0000D6C124_642492/1-87", "URS0000D6B822_642492/1-87" ]
[ "AGACUAUAAGGGGUGCAGGGAAAGUAUUUCCUGCCGUAUUCAGGAGGGUGCUCAGCUGACAUGUUUUUUGUCAGCGCCGCAGGGAAC", "AGACUAUAAGGGGUGCAGGGGAAGAAUUCCCAGCCGUAUUUAGGAGGGGGCUUAGCUGACAUGUUUUUUGUCAGCGUCGAAGGGAAU" ]
rfam_14_5_mafft
URS0000D6C12E_1249621_1-69
UCGAAGAGUAGAAGCGUUCAACCGCCCCGCCCUUUCCAGGCAUCGGGGCGGCAGGAAAUUGCUCUUGAG
....((((((...........((((((((..............))))))))........))))))....
[ "URS0000D6C12E_1249621/1-69", "URS0000D6A8C0_887062/1-57", "URS0000D6C66E_887062/1-57", "URS0000D675B9_12908/1-69", "URS0000D675B9_266264/1-69" ]
[ "UCGAAGAGUAGAAGCGUUCAAC---CGCCCCGCCCUUUCCAGGCAUCGGGGCGGCAGGAAAUUGCUCUUGAG", "CCCAAGAGUAGAAGCGUUCAGCGCAGGCCCAGCC---------------AGCGCCCGGAAAUUGCUCUGGAA", "GGCAGGAGUAGAAGCGUUCAGCGCAGGCCCAGCC---------------AGCGCCCGGAAAUUGCUCUUGAA", "UCGAAGAGUAGAAGCGUUCAAC---CGCCCCGCCCUUUCCAGGCACCGGGGCGGCAGGAAAUUGCUCUUGAG", "UCG...
rfam_14_5_mafft
URS0000D6C14F_293826_1-84
AAAAAACAGGGGUUGAAAGGGGAAACAUUCCCCUUCCUCAUUCAGGAGGGUGCUCAGACUGUGGAAACAGUCGUCGAAGGGGAC
..............((.((((((.....))))))))....................(((((......)))))............
[ "URS0000D6C14F_293826/1-84", "URS0000D6C271_293826/1-83" ]
[ "AAAAAACAGGGGUUGAAAGGGGAAACAUUCCCCUUCCUCAUUCAGGAGGGUGCUCAGACUGUGGAAACAGUCGUCGAAGGGGAC", "AAAAAACAGGGGUUGAAAGGGGAAGUAUUCCCCUUCCGUAGUCAGAAGGGUGCUCAGACGACUUUGUC-GUCGUCGAAGGGAAA" ]
rfam_14_5_mafft
URS0000D6C164_12908_1-145
CUCUGCCUUCAAGUCAGAUGCUGCAGACCUAAUGGGUGUGCAGUCAGUACAGAGGUGUAAAGGAUUCCGUCUCCUUUGCUCUCGCAAAAAAAUGUAAUGGGCAUUGAAUGCCGGUAGUAGUAUAAGCGAAUCCCGCAAUGCUCUG
..(.(((((...((.....((((((.((.......)).))))))....)).))))))...................(((....)))...............((..(.((((.((.....((....))....)).))).).)..))
[ "URS0000D6C164_12908/1-145", "URS0000D6CF82_12908/1-141", "URS0000D6CF82_1262790/1-141", "URS0000D6AD79_12908/1-140", "URS0000D6688C_12908/1-140", "URS0000D68E6A_12908/1-140", "URS0000D68E6A_742740/1-140" ]
[ "CUCUGCCUUCAAGUCAGAUGCUGCAGACCUAAUGGGUGUGCAGUCAGUACAGAGGUGUAAAGGAUUCCGUCUCCUUUGCUCUCGC-AAAAAAAUGUAAUGGGCAUUGAAUGCCGGUAGUAGUAUAAGCGAAUCCCGCAAUGCUCUG", "CUCUGCCUUCAAGUCAGAUGCUGCAGACCUAAUGGGUGUGCAGUCAGUACAGAGGUGUAAAGGAUUCCGUCUCCUUUGCUCUCGCAAAAAAAAUGUAAUGGGCA-UGAAUGCCGGUAGUAGUAUAAGCGAAUCCCGCAAUGC----", "CUCUGCCUUCA...
rfam_14_5_mafft
URS0000D6C177_12908_1-53
UGAUAUGGUCGUAGUACGGCGACCAGUAUAAUCGAAAGAAACGUACAAACGGA
.....((((((..[[[[..)))))).................]]]].......
[ "URS0000D6C177_12908/1-53", "URS0000D6C850_12908/1-53", "URS0000D6C850_1321779/1-53" ]
[ "UGAUAUGGUCGUAGUACGGCGACCAGUAUAAUCGAAAGAAACGUACAAACGGA", "UGACAUGUUCGUAGUAUGGCGAACAGGAUAAUCAAAAAAAACGUACAAUGAGA", "UGACAUGUUCGUAGUAUGGCGAACAGGAUAAUCAAAAAAAACGUACAAUGAGA" ]
rfam_14_5_mafft
URS0000D6C17A_12908_1-218
ACGUCAUACAGAUAUAUAAAUGCAAGACAAUUUAGUAUCUCCCUUUAACGUAGUGUUUUUGAGAAAUAUAAAUGAUAAGUUUCAUUGUGUAGCUAUUUUUAGUUGAAAUGAAAUAAAUUUAUAUGAAAUAGGUUAACCGUAAGACCUUAUGUUGAAAAACAUUAAAAUUGAUCUAAAAAUAAAAUUUUUGAAAUUUCUUUAUUUUUAGUUACGGUUGA
((((.(...((((((.(((((........))))))))))).....).))))................(((.(......((.(..(....(.(.......).).......)..)...)).).))).....(((((.[[[[[[.))))).(((((....)))))..........(((((((((((..............))))))))))).]]]]]]...
[ "URS0000D6C17A_12908/1-218", "URS0000D6C233_12908/1-209", "URS0000D69466_12908/1-218" ]
[ "ACGUCAUACAGAUAUAUAAAUGCAAGACAAUUUAGUAUCUCCCUUUAACGUAGUGUUUUUGAGAAAUAUAAAUGAUAAGUUUCAUUGUGUAGCUAUUUUUAGUUGAAAUGAAAUAAAUUUAUAUGAAAUAGGUUAACCGUAAGACCUUAUGUUGAAAAACAUUAAAAUUGAUCUAAAAAUAAAAUUUUUGAAAUUUCUUUAUUUUUAGUUACGGUUGA", "ACGUUAUAUAGAUAUGUAAAUGCAAGACAAUCUAGUAUCUCCCUUUAACGUGGUGUUUUUGAGAAAUAUAAAUGAUAAGUUUCAUUGUGUA...
rfam_14_5_mafft
URS0000D6C17C_12908_1-600
UAUCUGAAUCAUGCUUAUUAUUAACUCAGUGAAUAAAGCGUGUCAGCGCUCUGAGACGCACAGUAAUUUCCGUUUGGUUGAAUAGGGAUACCUAUUCGAUUGGGCGGCUAUGGUAUAGUGAUAUACCGUAGGGAGGCGGAAACCACCAACAAAAAUGUGUGUUGCCAAGAGUUGUCGCUGCAAAAUGCACGGAACUUUCGGGCGUAGCAAUAGACGCUCCCAGUGGGAGAAUAAGCCUAAGGGGUUAUGGUGUGGCAACCAUAAUGACAGAGGUAGGCCAACAAUACGCUCCGGCUUGAUGCAGAAGAAAUUCUGCUAUA...
.......(......((..(..(..(((((.......(((((....)))))))))).((((((........((((((.(((((((((....))))))))).)))))).((((((((((....))))))))))...((.((...)).))........))))))...........(.........(......(((.(((((((((((((..........((((.....)))).....((((.....(((((((..[[[[..))))))).....))))..]]]]....))))))[[[.[.....(((((......))))).......
[ "URS0000D6C17C_12908/1-600", "URS0000D65F47_12908/1-600", "URS0000D6603A_12908/1-600", "URS0000D6C8A6_12908/1-600", "URS0000D69E9B_12908/1-600", "URS0000D67AFA_12908/1-587" ]
[ "UAUCUGAAUCAUGCUUAUUAUUAACUCAGUGAAUAAAGCGUGUCAGCGCUCUGAGACGCACAGUAAUUUCCGUUUGGUUGAAUAGGGAUACCUAUUCGAUUGGGCGGCUAUGGUAUAGUGAUAUACCGUAGGGAGGCGGAAACCACCAACAAAAAUGUGUGUUGCCAAGAGUUGUCGCUGCAAAAUGCACGGAACUUUCGGGCGUAGCAAUAGACGCUCCCAGUGGGAGAAUAAGCCUAAGGGGUUAUGGUGUGGCAACCAUAAUGACAGAGGUAGGCCAACAAUACGCUCCGGCUUGAUGCAGAAGAAAUUCUG...
rfam_14_5_mafft
URS0000D6C187_12908_1-88
ACGUCUGGUUGAUUCGUCCCAGCGUGGCUAAGGGACGGACAUAAUGAGAAGGAACUGAGCAGAAAAAUGUCUGGUUGGGUGGCGAAGC
((((..((..........)).)))).............................((((.(((........))).))))..........
[ "URS0000D6C187_12908/1-88", "URS0000D658DC_12908/1-88", "URS0000D666C8_12908/1-88", "URS0000D6C4F6_12908/1-88", "URS0000D6CD48_12908/1-88", "URS0000D69098_12908/1-88", "URS0000D69E69_12908/1-88", "URS0000D69E69_665940/1-88" ]
[ "ACGUCUGGUUGAUUCGUCCCAGC-GUGGCUAAGGGACGGACAUAAUGAGAAGGAACUGAGCAGAAAAAUGU-CUGGUUGGGUGGCGAAGC", "--GACCGGUUGAUUCGUCCCGGUUGUGUUCGGGACGCAGGCAUAAAGAAAAGGAACUGAGCAGAAAAGGACGCUGGUCGGGUGGCGAAGC", "--GACCGGUUGAUUCGUCCCGGCUGCGUUCGGGACGCAGGCAUAAAGAAAAGGAACUGAGCAGAAAAGGACGCUGGUCGGGUGGCGAAGC", "--GACCGGUUGAUUCGUCCCGGCUGUG...
rfam_14_5_mafft
URS0000D6C19C_12908_1-128
GCUGUCUGCCGGCAGCACAUGGCACGCGCGGCCGCUGGCCGCAUCCGUCUGUGCGGUAGUGCCUGCCGCCGCUGUGGCCACUGGUCACAGCAGGGCGUUUUUGCGCCCCAUGCAGCAUCUUACUCACC
(((((......)))))....(((((..((((((...))))))..(((......)))..))))).((.((.(((((...........))))).(((((......)))))...)).))............
[ "URS0000D6C19C_12908/1-128", "URS0000D66C9F_12908/1-128", "URS0000D6A281_12908/1-128" ]
[ "GCUGUCUGCCGGCAGCACAUGGCACGCGCGGCCGCUGGCCGCAUCCGUCUGUGCGGUAGUGCCUGCCGCCGCUGUGGCCACUGGUCACAGCAGGGCGUUUUUGCGCCCCAUGCAGCAUCUUACUCACC", "GCUGUCUGCCGGCAGCACAUGGCACGCGCGGCCUCUGGCCGCAUCCGUCUGUACGGUAGUGCCUGCCGCCGCUGUGGCCACUGGCUACAGCAGGACGUUUGUGCGUCCCAUGCGGCGUCUUACUCACC", "GCUGUCUGCCGGCAGCACAUGGCACGCGCGGCCGCUGGCCGCAUCCG...
rfam_14_5_mafft
URS0000D6C1A3_12908_1-82
GAGCCCUUGCUCAAAAUAGAGUCGCAACUGGAUUGGAUUAGUAAGCCCAUUAUGGUUUGAAAAUCCGAUAGACAAAAAUAAG
((((....))))........(((........(((((((.....((((......)).))....))))))).))).........
[ "URS0000D6C1A3_12908/1-82", "URS0000D6D3BA_12908/1-80", "URS0000D695CF_12908/1-82", "URS0000D6B52F_12908/1-82", "URS0000D6B67A_12908/1-82" ]
[ "GAGCCCUUGCUCAAAAUAGAGUCGCAACUGGAUUGGAUUAGUAAGCCCAUUAUGGUUUGAAAAUCCGAUAGACAAAAAUAAG", "UAGCGCUUGCUAAAAAUAAAGUCGCAACUGGAUUAGUUUAGUAGCUUCUUUUAAG--UGAAAAACUGAUAGACAAAAAUAAG", "GAGCCCUUGCUCAAAAUAGUGUCGCAACUGGAUUGGACUAGUAAGCCCAUUAUGGUUUGAAAAUCCGAUAGACAAAAAUAAG", "GAGCCCUUGCUCAAAAUAGAGUCGCAACUGGAUUGGACUAGUAAGCCCAUU...
rfam_14_5_mafft
URS0000D6C1C6_12908_1-180
GCAGUCAACCCAGAACUACUAUUAUCAACCAAAUCCCUAAUGGAAGCUUAGUAACAACUAAGCUACUAAGCAAGAGUACAAUGGACUAUACAACGGUCAACCAGUAUCUAAUAUUGGUCUAAGAUGAAGGAAAAGGGUUGCCUAUGAAUAAGAGAUACGAAUAAAUAGGAUAGUAGUUUU
...........((((((((((....(((((..........((......(((((..........)))))..........))...((((.......)))).(((((((.....))))))).................)))))(((((...................))))).))))))))))
[ "URS0000D6C1C6_12908/1-180", "URS0000D6705C_12908/1-168", "URS0000D65F39_12908/1-180", "URS0000D69CA1_12908/1-180", "URS0000D6C85D_12908/1-180", "URS0000D6C1C5_12908/1-180", "URS0000D69564_12908/1-174", "URS0000D6A5C1_12908/1-174", "URS0000D65724_12908/1-173", "URS0000D660EA_12908/1-173" ]
[ "GCAGUCAACCCAGAACUACUA-UUAUCAACCAAAUCCCUAAUGGAAGCUUAGUAACAACUAAGCUACUAAGCAAGAGUACAAUGGACUAUACAACGGUCAACCAGUAUCUAAUAUUGGUCUAAGAUGAAGGAAAAGGGUUGCCUAUGAAUAAGAGAUACGAAUAAAUAGGAUAGUAGUUUU", "GCAGUCAACCCA-AGCUACUAUUUACCAACCAAAACCCUAAUGGAAGCUUAGAAA------------UAAGCAAGAGUACAAUGGACUAUACAACGGUCAACCAGGUAUUACUAUCUAGGUCAGGUGA...
rfam_14_5_mafft
URS0000D6C1CB_1169144_1-66
CCUGUGGAGAGCCAUAUAAACCAAAGUAGCAAGAUAGUGGCGAAAUGGGGCUCGUAGAAGCAGGAA
(((((...(((((.......(((.....((.........))....))))))))......)))))..
[ "URS0000D6C1CB_1169144/1-66", "URS0000D6BEE9_491915/1-63", "URS0000D6606F_12908/1-61" ]
[ "CCUGUGGAGAGCCAUAUAAACCAAAGUAGCAAGAUAGUGGCGAAAUGGGGCUCGUAGAAGCAGGAA", "CCUGUGGAGAGCCAUACAAACGAUAGUAGC---CUUUUGGCGAGGUCGGGUUCGUUGAAGCAGGAA", "ACUGUGGAGCGUCAUACAAACCAAAGUAGCCA-----AGGCAAAAUGGGACGCUACGAAGCAGUAA" ]
rfam_14_5_mafft
URS0000D6C1E4_12908_1-221
CUUGGUCACAUAGAGUAGCCAUAGGUGAAAGACGACCAUAGCAAAAGGAGAGGUACUUCCCUGAGGGUCAAACCUCUAAAACUGCUUUUCGAUAUGUCGACACGGACGCUUCUUGCAUGGCGCGGGAUGCAUCUUACCGCGUUUCAUGUGCCGGCAUAAAGCAGAUUAGACGAUGCCCUACAAUUCAUCUGUACGAGGAGCGAAUACUUUUAUGACAAGUC
..(((((..........((.....)).......)))))..........................((((...))))........((((((((..((((((.((((...((.....))..(((((((...........)))))))...)))).))))))...(((((......................))))).))))))))....................
[ "URS0000D6C1E4_12908/1-221", "URS0000D66A41_12908/1-221", "URS0000D67059_12908/1-221", "URS0000D6B999_12908/1-221" ]
[ "CUUGGUCACAUAGAGUAGCCAUAGGUGAAAGACGACCAUAGCAAAAGGAGAGGUACUUCCCUGAGGGUCAAACCUCUAAAACUGCUUUUCGAUAUGUCGACACGGACGCUUCUUGCAUGGCGCGGGAUGCAUCUUACCGCGUUUCAUGUGCCGGCAUAAAGCAGAUUAGACGAUGCCCUACAAUUCAUCUGUACGAGGAGCGAAUACUUUUAUGACAAGUC", "CUUGGUCACAUGGAGUAGCCAUAGGUGAAAGACGACCAUAGCAAAAGGAGAGGUACUUCCCUGAGGGUCAAACCUCUAAAACUGCUUU...
rfam_14_5_mafft
URS0000D6C1EA_12908_1-53
CGGCGGGCCGCAGGCCGGAAACAGGCGGCGGUGGGUGCGUCCCACCCGAAAGG
......(((((.............)))))((((((.....)))))).......
[ "URS0000D6C1EA_12908/1-53", "URS0000D6C475_12908/1-52", "URS0000D65E2B_12908/1-53" ]
[ "CGGCGGGCCGCAGGCCGGAAACAGGCGGCGGUGGGUGCGUCCCACCCGAAAGG", "CGGCGUGCCGCAGGCCGAAAAC-UGCGGCGGUGGGUGCGUCCCACCCGAAAGG", "CGGCGGGCCGCAGGCCGGAAACAGGCGGCGGUGGGUGCGUCCCACCUGAAAGG" ]
rfam_14_5_mafft
URS0000D6C1F3_12908_1-92
ACGGUAGGGGGAGACGGAGACGCUCCGAGGGGAACGCGGUCACCUGCACACGUCCUCGAAGCUGAGUCAAUGGUGAGACCGGCCCACGUGGC
..(.(((.(((.(((......((((.((((.......[[[[[[[.........))))).)))...)))...]]]]]..]]..))).).)).)
[ "URS0000D6C1F3_12908/1-92", "URS0000D6896C_12908/1-89", "URS0000D69CF3_12908/1-91", "URS0000D6A6FC_12908/1-92" ]
[ "ACGGUAGGGGGAGACGGAGACGCUCCGAGGGGAACGCGGUCACCUG-CACACGUCCUCGAAGCUGAGUCAAUGGUGAGACCGGCCCACGUGGC-", "GGCACAAGGGGAGACAGGGACGCUCCGAGGGGAACGCGGUCACCU----CAGGUCCUCGGUGUUGAGUCAAUGGUGAGACCGGCCCAUGUGGC-", "-AGCCAAAGGGAGACUGUGAUGCUCCG-GGGGAACGCGGUCACCUA-CACACGUCCCCGGCGUUGAGUCAGUGGUGAGACCGGCCCACAUGGCC", "--GGCAAAGGGAGAC...
rfam_14_5_mafft
URS0000D6C1FD_12908_1-90
AGGAGGAGGAGCGCAAUGACGCGAAGCGGCAUUUUUGAAAUGCGCUCCGACGAGCUGCCUCGACCCGAACGGGUCGUGGCGAUACCUUAA
.......((((((..(((.(((...))).)))..........)))))).......((((.((..((....))..)).)))).........
[ "URS0000D6C1FD_12908/1-90", "URS0000D68981_12908/1-89", "URS0000D6BFCB_12908/1-89" ]
[ "AGGAGGAGGAGCGCAAUGACGCGAAGCGGCAUUUUUGAAAUGCGCUCCGACGAGCUGCCUCGACCCGAACGGGUCGUGGCGAUACCUUAA", "AUUAGGAGGAACGCAAUGAUGCGAAGCAUCAUUUUUUAAAUGCGUUCCGACGAGCUGCCGCGACCA-GAAGAGUCGCGGCGAUACCCCUG", "GAGAGGAGGAGCGCAAUGAUGCGUAGCAGCAUUCUUUGAAUGCGCUCCGACGACAUGCCCCGGCCC-AGUGGGGCGGGGCGAUACCUUGA" ]
rfam_14_5_mafft
URS0000D6C201_12908_1-78
GGCUGCGCCGUGUCGGGUGUGUGGAAACGCCCCCGGAGGUUUUGCGAAAAGAACCUCGACAGCACGUAGCGCAGCCUU
((((((((.((((((((...(((....)).))))).((((............)))).....))))...))))))))..
[ "URS0000D6C201_12908/1-78", "URS0000D66DED_12908/1-77" ]
[ "GGCUGCGCCGUGUCGGGUGUGUGGAAACGCCCCCGGAGGUUUUGCGAAAAGAACCUCGACAGCACGUAGCGCAGCCUU", "GGCUGCGCCGUGUCGGGUGUGCGGAAACG-CCCCGGAGGUUUUGCGAAAAGAACCUCGACAACACGUAGCGCAGCCUU" ]
rfam_14_5_mafft
URS0000D6C20C_411465_1-76
AUGCCUAAUGAUAAAGCUGUAAUUAUUUCAUCAUAAUUACCAAAAUUUAAUUAUAAAAAAGAGAUUAUGAUAUAAU
.............................((((((((..........................)))))))).....
[ "URS0000D6C20C_411465/1-76", "URS0000D68BC4_767100/1-73", "URS0000D68760_767100/1-73", "URS0000D6C42C_767100/1-73", "URS0000D6BC13_12908/1-76", "URS0000D66BDA_12908/1-76", "URS0000D6B64B_944565/1-76", "URS0000D6A3EF_12908/1-76", "URS0000D6A5C3_944565/1-76", "URS0000D67A14_12908/1-76" ]
[ "AUGCCUAAUGAUAAAGCUGUAAUUAUUUCAUCAUAAUUACCAAAAUUUAAUUAUAAAAAAGAGAUUAUGAUAUAAU", "AUGCCUUGUGAUAAAACAAUAUUAAUUUCAUCGUAAUUACCAAAA---AAUAAUCAAAAAGGAAUUACGAUAUAAU", "AUGCCUUAUGAUAAAACUACAUUAAUUUCAUCGUAAUUACCAAAA---AAUAAUUAAAAAGGAAUUACGAUAUAAU", "AUGCCUUAUGAUAAAACUACAUUAAUUUCAUUGUAAUUACCAAAA---AAUAAUUAAAAAGGAAUUACG...
rfam_14_5_mafft
URS0000D6C216_12908_1-76
GCCCUCGUCGUGUCCGGUAGCAGUAAUGCCCGGGUGGUUCUGCAUUUGAGACCAUAGGAGCACGUAACGGGGGCUU
((((((((.((((((((..(((....))))))).((((............)))).....))))...))))))))..
[ "URS0000D6C216_12908/1-76", "URS0000D6C5F2_12908/1-74", "URS0000D6D14F_12908/1-74" ]
[ "GCCCUCGUCGUGUCCGGUAGCAGUAAUGCCCGGGUGGUUCUGCAUUUGAGACCAUAGGAGCACGUAACGGGGGCUU", "GCCCUCGUCGUGUCCGGUAGUAGUAAUACCCGGGCGG--UCAGCUUACAGACCGUAGGAGCACGUAACGGGGGCUU", "GCCCUCGUCGUGUCCGGUAGCAGUAAUGCCCGGGUGG--CCAGCUUAACAGCCAUAGGAGCACGUAACGAGGGCUU" ]
rfam_14_5_mafft
URS0000D6C21C_12908_1-74
UCCGUAAUGCAGCCACUCCCGUGGAUGGUCCGCGGGGGUGCGGGUUCCAAGCCCCGGUAAAUGCAGAGGACGGA
((((...((((((((((((...............))))))[[[..{{{..)).]]].....))))..}}}))))
[ "URS0000D6C21C_12908/1-74", "URS0000D67549_12908/17-77", "URS0000D69F9F_12908/17-77", "URS0000D6B34E_12908/17-77", "URS0000D6AF90_12908/17-77", "URS0000D65BCB_12908/1-62" ]
[ "UCCGUAAUGCAGCCACUCCCGUGGAUGGUCCGCGGGGGUGCGGGUUCCAAGCCCCGGUAAAUGCAGAGGACGGA-", "GCCUUAAUGCAGCC-------------GCCCGGAUGGGCGCGGGUCUCAAGCCCCGGCAAAUGCAGAGAGAGGA-", "ACCUUAAUGCAGCC-------------GCCCGGAUGGGCGCGGGUCUCAAGCCCCGGCAAAUGCAGAGAGAGGA-", "ACCUUAAUGCAGCC-------------GCCCAGCAGGGCGCGGGUCCCCAGCCCCGGUAAAUGCAGAGGGAG...
rfam_14_5_mafft
URS0000D6C21F_12908_1-171
UCCUGAAGAUUUUUAUAUCUCCUUGAGCAAGAGAUAUAGAAUAGGACUACACGUCAAUUUACUAGCACAUUAUUUAGGUUUAUUUUAAGUCAUGAAAUUCAACUUUGACAGAAAUGGAUAGGUGGUGAAAGAAAAUCUUUAGGAUUUUCAAAAGUAAGUUGGCUAUUUUAG
(((((.....((((.......................)))))))))......((((((((((.......................................((((...((....))...))))..............................))))))))))........
[ "URS0000D6C21F_12908/1-171", "URS0000D68575_12908/1-167" ]
[ "UCCUGAAGAUUUUUAUAUCUCCUUGAGCAAGAGAUAUAGAAUAGGACUACACGUCAAUUUACUAGCACAUUAUUUAGGUUUAUUUUAAGUCAUGAAAUUCAACUUUGACAGAAAUGGAUAGGUGGUGAAAGAAAAUCUUUAGGAUUUUCAAAAGUAAGUUGGCUAUUUUAG", "UCCUGGAGAGUUUUAUGUUUCCCUGAGCAAGAAACGUGAAAUAGGACUACACGCCAAUUUACUAGCACAUCAUUUAGAUUUAUUUUAAGUCAUAAAAUUCAGCUUUGACAAAAUUGGAAAAGCGGUGAAAGAAAAUU-...
rfam_14_5_mafft
URS0000D6C22C_1225184_1-72
GCAGUGACGCCGUUUGUCGCUGCCGCUUUCAGCUUGAAAGCCAAUAACACUGACAGAAGGAAUUUAUCGAUG
.((((((((.....))))))))...((((.......))))................................
[ "URS0000D6C22C_1225184/1-72", "URS0000D6C22C_12908/1-72" ]
[ "GCAGUGACGCCGUUUGUCGCUGCCGCUUUCAGCUUGAAAGCCAAUAACACUGACAGAAGGAAUUUAUCGAUG", "GCAGUGACGCCGUUUGUCGCUGCCGCUUUCAGCUUGAAAGCCAAUAACACUGACAGAAGGAAUUUAUCGAUG" ]
rfam_14_5_mafft
URS0000D6C22F_12908_1-217
CGGGGCUUGGAAUCAUGAUGCUGUGGGCCCCGCCAGCGUUUUAUCCGGCUAUCACGGGGAUCCUCGCAAGCCGGACGGUAUAGCUGCAUCAGCUCUAAAGUAGGCCGCUGGGGGUUAACUCACCACUGCCCCGGUGCUCCGAAUUUCAUGAGAGCUGAUGCACUACACGCCGCGAGGGGGUGGGUCGUGUUGGACGGCUCAGAAGGUGUAGACGCCG
(((((((..................)))))))...........((((((.............[[[[[..))))))..........((((((((((........................................................)))))))))).((((((...]]]]]....((((.............))))....))))))......
[ "URS0000D6C22F_12908/1-217", "URS0000D66D16_12908/1-216", "URS0000D665BF_12908/1-214", "URS0000D6C772_12908/1-215", "URS0000D6AF56_12908/1-215" ]
[ "CGGGGCUUGGAAUCAUGAUGCUGUGGGCCCCGCCAGCGUUUUAUCCGGCUAUCACGGGGAUCCUCGCAAGCCGGACGGUAUAGCUGCAUCAGC-UCUAAAGUAGGCCGCUGGGGGUUAACUCACCACUGCCCCGGUGCUCCGAAUUUCAUGAGAGCUGAUGCACUACACGCCGCGAGGGGGUGGGUCGUGUUGGACGGCUCAGAAGGUGUAGACGCCG", "CGAGGGUUGGAAUCACGAUGUUGUGGCCCCCGCUAGCGUUUUAUCCGGUCAUCACGGGGAUCCUCGCAGACCGGACGGUAUAGCUGCAUCA...
rfam_14_5_mafft
URS0000D6C237_12908_1-53
UCGGUGCCUGCAGACCCCCGACAUUCUAUGACGGCUCGCCGUCCAAGUUCUGC
((((.(...[[[[[.).))))........(((((....))))).....]]]]]
[ "URS0000D6C237_12908/1-53", "URS0000D6736A_12908/1-53" ]
[ "UCGGUGCCUGCAGACCCCCGACAUUCUAUGACGGCUCGCCGUCCAAGUUCUGC", "UCGGGGCCUGCAGACCCCCGGCAUUCUAAGACGGCUCGCCGUCCAAGUUCUGC" ]
rfam_14_5_mafft
URS0000D6C243_641118_1-58
AUGCAGCGCCGGGCCCCUCUGGUCAUGGCUACCGCUAUGGCGAUGUCGGGGCUGCUCC
.....((.((((.........((((((((....))))))))....)))).))......
[ "URS0000D6C243_641118/1-58", "URS0000D6C243_439375/1-58" ]
[ "AUGCAGCGCCGGGCCCCUCUGGUCAUGGCUACCGCUAUGGCGAUGUCGGGGCUGCUCC", "AUGCAGCGCCGGGCCCCUCUGGUCAUGGCUACCGCUAUGGCGAUGUCGGGGCUGCUCC" ]
rfam_14_5_mafft
URS0000D6C256_12908_1-74
ACUGUGGAGUAUUAUAUCAAACUAGAGUAGAUUACUAUUUAUAGUUUUCAAAAUGGGAUACGCUGAAACAGUAA
(((((...(((((........(((.....((...((......))...))....))))))))......)))))..
[ "URS0000D6C256_12908/1-74", "URS0000D688BE_12908/1-62", "URS0000D6AAE0_12908/1-66" ]
[ "ACUGUGGAGUAUUAUAUCAAACUAGAGUAGAUUACUAUUUAUAGUUUUCAAAAUGGGAUACGCUGAAACAGUAA", "CCUUUGGAGUAUUAUAUCAAACACGAGUAG------------AUUUUUCGAAAGUGGAUACUAUGAAUAAGGAA", "ACUGUGGAGUAUUAUAUCAAAUCAAAGUAG--------UUCUAUAGAACAAAAUGAGAUACGAAGAAACAGUAA" ]
rfam_14_5_mafft
URS0000D6C277_12908_1-51
UGAUUUUGCCGUAGGGCGCGGCAAACGGAAAAUAAAGAAAGUUCAAAAGAA
.....((((((..[[[[.))))))................]]]].......
[ "URS0000D6C277_12908/1-51", "URS0000D6C277_411475/1-51", "URS0000D693AC_12908/1-51" ]
[ "UGAUUUUGCCGUAGGGCGCGGCAAACGGAAAAUAAAGAAAGUUCAAAAGAA", "UGAUUUUGCCGUAGGGCGCGGCAAACGGAAAAUAAAGAAAGUUCAAAAGAA", "UGAUUUUGUCGUAGAGCGCGACAAAGUAAAAAUAAAGAAAGCUCACUGAGA" ]
rfam_14_5_mafft
URS0000D6C27A_12908_1-74
CGUUGCAACAACCCCGUGGUUUGGGCGCAGUGGGGCAAGGUAUUUGUCCGGUGCGCAGUGAAGCCACUGCAACA
.((((((........(((((((..(((((.((................)).)))))....))))))))))))).
[ "URS0000D6C27A_12908/1-74", "URS0000D6CB5E_12908/1-72" ]
[ "CGUUGCAACAACCCCGUGGUUUGGGCGCAGUGGGGCAAGGUAUUUGUCCGGUGCGCAGUGAAGCCACUGCAACA", "UGUUGCAACAACCCCGUGGAUUGGGUG--GCGAGGCCAGGGAAGGGCCGGAGCCACAGUGAACCCACUGCAACA" ]
rfam_14_5_mafft
URS0000D6C282_12908_1-90
AGGAGGAGCCAGCUUUGACGGCGGAAGCCGUCAACUCUAAUGCUGGCGACGACCUGCCGCCGAAGCGGAGCUGAGGGGGCGCUACCAUUG
.......((((((..(((((((....)))))))........)))))).......((((.((..((.....))..)).)))).........
[ "URS0000D6C282_12908/1-90", "URS0000D69E88_12908/1-90" ]
[ "AGGAGGAGCCAGCUUUGACGGCGGAAGCCGUCAACUCUAAUGCUGGCGACGACCUGCCGCCGAAGCGGAGCUGAGGGGGCGCUACCAUUG", "AGGAGGAGCCGCCCAUCGUCUGCAAAGCAGACGAUUCUCAUGGCGGCGACGACUUGCCGCCGAAGCGGAGCUGAGGGGGCGCUACCAUUG" ]
rfam_14_5_mafft
URS0000D6C28A_12908_1-159
GUUGUUAGCGUAAGGCUUUAUAGCGAAAUCGGAAUCGCUAAAGUAACAACUUGUCCCAUAGAAGCCGUGAGGCCGUUCAUGUGUGGCGAAAGCCUGCAGGACAAAAAGGUAAACAAAUCCGGCGAAAAACUAUCAAAGACGGCCCUUUGGUAGUUUUUU
(((((((..............(((((..[[[[[.)))))....)))))))((((((.......((((((({{{{{{))))).))(((....)))....)))))).............]]]]]...(((((((((((((}}}}}})))))))))))))..
[ "URS0000D6C28A_12908/1-159", "URS0000D66526_12908/1-159", "URS0000D6581A_12908/1-159", "URS0000D698F9_12908/1-159" ]
[ "GUUGUUAGCGUAAGGCUUUAUAGCGAAAUCGGAAUCGCUAAAGUAACAACUUGUCCCAUAGAAGCCGUGAGGCCGUUCAUGUGUGGCGAAAGCCUGCAGGACAAAAAGGUAAACAAAUCCGGCGAAAAACUAUCAAAGACGGCCCUUUGGUAGUUUUUU", "GUUGUUAGCGUAAGGCUUUAUAGCGAAAUCGGAAUCGCUAAAGUAACAACUUGUCCCAUAGAAGCCGUGAGGCCGUUCAUGUGCGGCGAAAGCCUGCAGGGCAAAAAGGUAAACAAAUCCGACGAAAAACUAUCAAAGACGGCCCUUUGG...
rfam_14_5_mafft
URS0000D6C290_12908_1-49
CGGGCUGGUCAUCGUGACCCAGGUCCACCUUUCGACGGGUAAGACACCC
.(((((((((.....))))..))))).......................
[ "URS0000D6C290_12908/1-49", "URS0000D6A799_12908/1-48" ]
[ "CGGGCUGGUCAUCGUGACCCAGGUCCACCUUUCGACGGGUAAGACACCC", "UGGGCUGGUCGU-AAGACCCGGUUCCACCAAUCGGCGGGUAAGACACCC" ]
rfam_14_5_mafft
URS0000D6C2AB_12908_1-133
ACGAACCGAUACCGGAGGCGAUCCAGGAAGGAUCGGGGGAUGACCCGCACUGGCGGGCGGCUGCUCAGAGAGCACAACCGAUACCCCCACAACACCUCAACAGCGACCCGCCCCGGCGCUCAGGUAUCGUUCC
..(((.(((((((.....((((((.....))))))((((....(((((....)))))(((.(((((...)))))...)))....))))..................................)))))))))).
[ "URS0000D6C2AB_12908/1-133", "URS0000D66CE6_12908/1-132", "URS0000D6B036_12908/1-131", "URS0000D6C1AF_500640/1-131", "URS0000D66F21_936157/1-131", "URS0000D6CA2B_500640/1-131", "URS0000D6941B_500640/1-131", "URS0000D677EA_500640/1-132", "URS0000D6953A_598467/1-131", "URS0000D6A4B6_1667327/1-130" ]
[ "ACGAACCGAUACCGGAGGCGAUCCAGGAAGGAUCGGGGGA-UGACCCGCACUGGCGGGCGGCUGCUCAGAGAGCACAACCGAUACCCCCACAACACCUCAACAGCGACCCGCCCCGGCGCUCAGGUAUCGUUCC", "AUGAACCGAUACCGGAGGGGGAUAAGGAUUAUCCGGGGGA-UGACCUGCGAAAGCAGGCGGCUGCUCAGAGAGCACAACCGAUG-CCCCGCAACACCUCAACAGCGACCCGCCCCGGCGCUCAGGUAUCGUUCG", "AUGAACCGAUGCCGGAGGGGGACAGGGACUGUCCG...
rfam_14_5_mafft
URS0000D6C2B4_12908_1-86
GCCCUAACUGUAUGCAGGGCAUACUCUCGCCACGAAAGGCGAGGGCCGAAGAAUGUUAAACUUCAGUAAUUAAACAGACAUCAUGG
(((((..........)))))....((((((........))))))((.((((.........)))).))...................
[ "URS0000D6C2B4_12908/1-86", "URS0000D6CCDE_12908/1-74", "URS0000D66142_12908/1-78", "URS0000D69917_12908/1-78", "URS0000D684C6_12908/1-78", "URS0000D6839C_12908/1-78", "URS0000D696AB_12908/1-73", "URS0000D68227_12908/1-77", "URS0000D6BCE5_12908/1-77", "URS0000D68404_12908/1-73" ]
[ "GCCCUAACUGU-AUGCAGGGCAUACUCUCGCCA-CGAAAGGCGAGGGCCGAAGAAUGUUAAACUUCAGUAAUUAAACAGACAUCAUGG", "CCCCUGACUGCAAGGCAGGGCGCACUCUCG----CAAGAGGCGAGGGCCGAAGAAUGUUAAACUUCAGUAAUCAAACA----------", "GCCCUAACUGU-AUGCAGGGCAUACUCUCGCCAUCGAAUGGCGAGGGCCGAAGAAUGUUAAACUUCAGUAAUUAAACAG---------", "GCCUUAACUGU-AUGCAGGGCAUACUCUCGCCA...
rfam_14_5_mafft
URS0000D6C2DC_12908_1-72
CACGUGGACUGUUACAUCAAACCGUAGUAGACACUCCUUGCAGUUUCGAGACGGGACAGGAAGAAGCGUGAA
(((((...(((((........(((.....((..((......))..))....))))))))......)))))..
[ "URS0000D6C2DC_12908/1-72", "URS0000D67827_12908/1-71", "URS0000D65F6F_12908/1-71", "URS0000D68A68_12908/1-71", "URS0000D69FEE_12908/1-71" ]
[ "CACGUGGACUGUUACAUCAAACCGUAGUAGACACUCCUUGCAGUUUCGAGACGGGACAGGAAGAAGCGUGAA", "CACGUGGACUGUUACAUAAAACCGUAGUAGACACU-AUUACAGUUUCGAGACGGGACAGGAAGAAACGUGAA", "CACGUGGACUGUUACAUCAAACCGUAGUAGACACU-CUUACAGUUUCGAGACGGGACAGGAAGAAACGUGAA", "CACGUGGACUGUUAUAUCAAACCGUAGUAGAUACU-CUUACAGUUUCAAGGCGGGACAGGAAGAAGCGUGAA", "CAC...
rfam_14_5_mafft
URS0000D6C2E0_12908_1-74
GCUUCCGCUAUCCGAACUGUCGCCGUAUGGUUGGCGUGCCUGGGUUCCGCCCAGGAUAGGACGCGGGAGCGCAU
(((((((...(((.......((.(.....).)).....(((((.......)))))...)))..)))))))....
[ "URS0000D6C2E0_12908/1-74", "URS0000D6A366_12908/1-70" ]
[ "GCUUCCGCUAUCCGAACUGUCGCCGUAUGGUUGGCGUGCCUGGGUUCCGCCCAGGAUAGGACGCGGGAGCGCAU", "-CCCCUGCGAUCCGAACUGUCGCCGUAUGGUUGGCGUUCCUGG--UUCCGCCAGGAUAGGACGCGGGUGCGCA-" ]
rfam_14_5_mafft
URS0000D6C301_12908_1-70
UUCAUGCCGUAACAUGAAGCGAGUCGUCCUUCCCCCAGUUUACAUGGGACGGCAAACUGAGUGUGGCUAU
((((((......))))))....(((((((.................))))))).................
[ "URS0000D6C301_12908/1-70", "URS0000D688C5_12908/1-70", "URS0000D6B41C_12908/1-60" ]
[ "UUCAUGCCGUAACAUGAAGCGAGUCGUCCUUCCCCCAGUUUACAUGGGACGGCAAACUGAGUGUGGCUAU", "UUCAUGCCGUAACAUGAAGCGAGUCGUCCUUCCCCUAGUUUACAUGGGACGGCAACCUGAGUGUGGCUAU", "UUCAUGCCGUAACAUGAAGCGAGUCGCCCCGU----------AAGGCGGCGGCAACCUGAAUGUGGCUAU" ]
rfam_14_5_mafft
URS0000D6C337_1158608_1-49
AAAGAAGUAGCUCCCGACAAAUGAAUGUGAUGAAGCAUUGUUGUGGAGC
..........((((..(((...................)))...)))).
[ "URS0000D6C337_1158608/1-49", "URS0000D6C221_1158609/1-49" ]
[ "AAAGAAGUAGCUCCCGACAAAUGAAUGUGAUGAAGCAUUGUUGUGGAGC", "AAAGAAGCAGCUCCCAACAGAUGAAUGUGAUGAAGCAUUGUUGUGGAGC" ]
rfam_14_5_mafft
URS0000D6C33D_12908_1-62
UGGCUACUCCGCAGGCCUUACAAAGCGGAACGGCAGGAGAAGGCUACCUCCUAAAACGCCUA
.(((....[[[[..))).......]]]].......((((........))))...........
[ "URS0000D6C33D_12908/1-62", "URS0000D69705_12908/1-60", "URS0000D6754C_12908/1-61", "URS0000D67131_12908/1-60" ]
[ "UGGCUACUCCGCAGGCCUUACAAAGCGGAACGGCAGGAGAAGGCUACCUCCUAAAACGCCUA", "--GGCCUCCCGCGGGCCUAACAAAGCGGAACAGCGGGUGACGGCGACCACCUAAAACGCCUA", "-GGCUUAUCUGCAAGCCUAAAACAGCAGGACGGCAGGAGCUGGCGACCUCCUAAAACGCCUA", "-GGCCUAUCUGCGGGCCUAAAAC-GCAGGACGGCGGGAGACGGCGACCUCCUAAAACGCCUA" ]
rfam_14_5_mafft
URS0000D6C34C_12908_31-115
CCUGUAAAGCUGCCGCUGGGUGUCUCAAGCCACCAGACUAACAAAGCAUAGCACAAAUGCGUUCGUUAGUGAAGCUGAGAGCAGG
((((...((((((.....[[[..{{{..)).]]]......................................))))..}}}))))
[ "URS0000D6C34C_12908/31-115", "URS0000D69675_12908/27-111" ]
[ "CCUGUAAAGCUGCCGCUGGGUGUCUCAAGCCACCAGACUAACAAAGCAUAGCACAAAUGCGUUCGUUAGUGAAGCUGAGAGCAGG", "CCUGUAAAGCUGCCGCUGGGUGUCUCAAGCCACCAGACUAACAAAGCAUAGCACAAAUGCGUUCGUUAGUGAAGCUGAGAGCAGG" ]
rfam_14_5_mafft
URS0000D6C350_12908_1-60
UGUUAAUAGAUUGCCUCUGUCAUUACCUGCUUUUUGCGGAUAUGGGAAUGCAAUUGAUGA
........((((((.....((((...(((.......)))..))))....)))))).....
[ "URS0000D6C350_12908/1-60", "URS0000D68CEB_12908/1-58", "URS0000D6CF14_12908/1-60", "URS0000D6865A_12908/1-60", "URS0000D69A13_12908/1-60", "URS0000D66002_12908/1-60", "URS0000D69605_12908/1-60", "URS0000D6B823_12908/1-58", "URS0000D695CA_12908/1-58", "URS0000D67CF5_12908/1-60" ]
[ "UGUUAAUAGAUUGCCUCUGUCAUUACCUGCUUUUUGCGGAUAUGGGAAUGCAAUUGAUGA", "--UUAACAGAUUGCCUCUGUCAUUACCUGCUUUUUGCGGAUAUGGGAACGCAAUUGAUGA", "UGUUAAGAGAUUGCCUCUGUCAUUACCUGCUUUUUGCAGAUAUGGGAAUGCAAUUGACAA", "UGUUAAGAGAUUACCUCUGUCGUUACCUGCUUUUUGCAGAUAUGGGAAUGUAAUUGAUGA", "UGUUAGGAGAUUACCUCUGUCAUUACCUGCUUUUUGCAGAUAUGGGAAUGU...
rfam_14_5_mafft
URS0000D6C358_12908_1-297
GAAUGCGGCUGAUGCGUGGGCAUAAUAUAGCGGAACCAUAACCGCUAAAGUGAAGCGACGCAUAAAGAAACAGGUAGUGCUUUUGCCUGUGGUGGAGCAGAAACAGAACACCGCCGUGAGAAGACACGUUAAAAUCUAGUGUUCACUGCGUGGAACGGUGGGGAAUUCAUCUUAGAUGAAUGUGGAGCCCCACGUUAAAAUAAAAAGCCUAUUGCCACACGGUGCUUCAUCUGCAAUGCGUUCCGGGUAGACAAAUUUGGGGCCAACCGCUGGUGAAAGCACCGCCAGCGGUAUGCG
...(.((.....................(((((..[[[.[.)))))....)).)...((((((......((((((({{{{{{{)))))))((((((((.............................................................................................................................))))))))....))))))..............].]]].....((((((((((}}}}}}})))))))))).....
[ "URS0000D6C358_12908/1-297", "URS0000D6C140_12908/1-291" ]
[ "GAAUGCGGCUGAUGCGUGGGCAUAAUAUAGCGGAACCAUAACCGCUAAAGUGAAGCGACGCAUAAAGAAACAGGUAGUGCUUUUGCCUGUGGUGGAGCAGAAACAGAACACCGCCGUGAGAAGACACGUUAAAAUCUAGUGUUCACUGCGUGGAACGGUGGGGAAUUCAUCUUAGAUGAAUGUGGAGCCCCACGUUAAAAUAAAAAGCCUAUUGCCACACGGUGCUUCAUCUGCAAUGCGUUCCGGGUAGACAAAUUUGGGGCCAACCGCUGGUGAAAGCACCGCCAGCGGUAUGCG", "------GGCUGA...
rfam_14_5_mafft
URS0000D6C35E_12908_1-121
UGCCUAUGAAGCGGCUACUAUGUUGGUGUGUGGCUGUGGAGGUGCUAUUAGGGUUGUGUGGUGAAUAUACUCCAAGUUCCAACUUAGGCUUAAUUGAAAGCUGAAAAUAAAAACACUCAAA
((((......((((((((....[.[[...))))))))...)))).............(((.................]].].....(((((......)))))...........))).....
[ "URS0000D6C35E_12908/1-121", "URS0000D67AA1_12908/1-114", "URS0000D6779D_12908/1-115" ]
[ "UGCCUAUGAAGCGGCUACUAUGUUGGUGUGUGGCUGUGGAGGUGCUAUUAGGGUUGUGUGGUGAAUAUACUCCAAGUUCCAACUUAGGCUUAAUU-GAAAGCUGAAAAUAAAAACACUCAAA", "UGCCUAUGAAGCGGUUGCUAUGUUGGUGCGUUGCCGUGGAGGUACUAUUAGGGUUGUGUGG-------ACUCCAAGUUCCAACUUAGGCUUAAUC-AAAAGCCGAAAAUAAAAACACUCAAA", "UGCCUAUGAAGCGGCUGCUAUGUUGGUAUGUUGCCGUGGAGGUGCUAUUAGGGUUGUGU...
rfam_14_5_mafft
URS0000D6C367_1219080_1-106
AAUGACCAAGGAAUGUUUUUUUCGCAAACUUUUCAGCGAGAGACGGAAUGGAAGCAGGCUAAUUUCACACAUAUUAGCCCUUUGAGAGACAAUUAUAAGGAACAAU
...................((((((..........))))))...............(((((((.........)))))))...........................
[ "URS0000D6C367_1219080/1-106", "URS0000D68823_1188257/1-103", "URS0000D68823_1205908/1-103", "URS0000D68823_1188253/1-103" ]
[ "AAUGACCAAGGAAUGUUUUUUUCGCAAACUUUUCAGCGAGAGACGGAAUGGAAGCAGGCUAAUUUCACACAUAUUAGCCCUUUGAGAGACAAUUAUAAGGAACAAU", "AAUGACCAAGGAAUGUUUUUCUCGCAAACUUUUCAGCGAGAGACGGAAUGGAAGCAGGCUAA-UGCACACA-AUUAGCCCUUAAGAAGACAAUUAUAAGGAAUGG-", "AAUGACCAAGGAAUGUUUUUCUCGCAAACUUUUCAGCGAGAGACGGAAUGGAAGCAGGCUAA-UGCACACA-AUUAGCCCUUAAGAAGACA...
rfam_14_5_mafft
URS0000D6C368_12908_1-179
CUGACUGCGUGCAUGGCUCUCCAUCACUAAGUUAUGCACAGCAUUAAUAAGGAGGAAUAUGAACUUCCCUGUGGCUCGGGGUACGGCAUUGUUGGAGACAUGCCGCAAGGCGGCGCGCGUAUGCGGCCGCGAGGUCACGACCGGCGGAGGCCGCGUGAUCGGAGCCGGAAUGUAUGGCA
........((((((((((...........))))))))))...........................((((.[[[[[[))))(.((((((.((.....)))))))).)..(((((.(((....))))))))..(((((((...(((....))).))))))).]]]]]]............
[ "URS0000D6C368_12908/1-179", "URS0000D6CFCD_12908/1-179" ]
[ "CUGACUGCGUGCAUGGCUCUCCAUCACUAAGUUAUGCACAGCAUUAAUAAGGAGGAAUAUGAACUUCCCUGUGGCUCGGGGUACGGCAUUGUUGGAGACAUGCCGCAAGGCGGCGCGCGUAUGCGGCCGCGAGGUCACGACCGGCGGAGGCCGCGUGAUCGGAGCCGGAAUGUAUGGCA", "CUGACUGCGUGCAUGGCUCUCCAUCACUAAGUUAUGCACAGCAUUAAUAAGGAGGAAUAUGAACUUCCCUGUGGCUCGGGGUACGGCAUUGUUGGAGACAUGCCGCAAGGCGGCGAGCGUAUGCGGCCGC...
rfam_14_5_mafft
URS0000D6C36F_12908_1-55
AAUAUAAUGCAGCCAUGGUUAGUGACAAGCCUAAUUGAAAAAUGCAGAGUCUAUU
((((...((((((.....[[[..{{{..)).]]]........))))..}}}))))
[ "URS0000D6C36F_12908/1-55", "URS0000D6629E_12908/1-53", "URS0000D690EF_12908/1-55", "URS0000D65D15_12908/1-55", "URS0000D6962E_12908/1-52", "URS0000D6C3F2_12908/1-55", "URS0000D6AD9D_12908/1-54", "URS0000D67CB0_12908/1-52", "URS0000D67DBA_12908/1-52" ]
[ "AAUAUAAUGCAGCCAUGGUUAGUGACAAGCCUAAUUGAAAAAUGCAGAGUCUAUU-", "AAUAUAAUGCAGCCAUGGUUAGUGACAAGCCUAAGU---AAAUGCAGAGUCAUAUU", "AAUAUAAUGCAGCCAAAGUUAGUGACAAGCCUAAUUGAAAAAUGCAGAGUCUAUU-", "AAUAUAAUGCAGCCAAAGUUAGUGACAAGCCUAAUUGAAAAAUGCAAAGUCUAUU-", "AAUAUAAUGCAGCCAUGGUUAGUGACAAGCCUAAGU---AAAUGCAGAGUCUAUU-", "AAUAU...
rfam_14_5_mafft
URS0000D6C375_12908_1-55
CGGUUGGGAGGUCCGCCGAUGUGGACCGCUGGGGUCUCGUACCCCGCCCGGCCGC
(((.((((.(((((((....)))))))..(((((.......))))))))).))).
[ "URS0000D6C375_12908/1-55", "URS0000D66180_12908/1-53", "URS0000D6A5CE_1187851/1-55" ]
[ "-CGGUUGGGAGGUCCGCCGAUGUGGACCGCUGGGGUCUCGUACCCCGCCCGGCCGC", "-CAGUUGGGAGGUCCGCCGUAGCGGAUCGCAGGGGUUU--GUCCCCACCCGGCUGC", "GCGGUUGGGAGGUCCGCCGAUGCGGACCGUCGGGGUCGU-UACCUCGCCCGGCCGC" ]
rfam_14_5_mafft
URS0000D6C38A_12908_1-101
AAUGAUACCUUCCCGAACCUUGCAUUUUCGGGAGCUGCGUUAGCAGGAAUAAUUCGCAGCGGAAGCAUCGCCAUAGCUGAAAAAGGCCAUGGGGAGCUUUC
..........(((((.............)))))((((((...............))))))((((((..(...((.((........)).))...).))))))
[ "URS0000D6C38A_12908/1-101", "URS0000D67C18_12908/1-101", "URS0000D6D069_12908/1-101", "URS0000D67F20_12908/1-100" ]
[ "AAUGAUACCUUCCCGAACCUUGCAUUUUCGGGAGCUGCGUUAGCAGGAAUAAUUCGCAGCGGAAGCAUCGCCAUAGCUGAAAAAGGCCAUGGGGAGCUUUC", "AAUGAUACUUUCCCGAACCUUGCAUUUUCGGGAGCUGCGUUAGCAGGAAUAAUUCGCAGCGGAAGCAUCGCCAAGGCUGAAAAAGGCCAUGGGGAGCUUUC", "AAUGAUACCUUCCCGAACCUUGCAUUUUCGGGAGCUGCGUUAGCAGGAAUAAUUCGCAGCGGAAGCAUCGCCACGGCUGAAAAAAGCCAUGGGGAGCUUUC...
rfam_14_5_mafft
URS0000D6C39A_12908_1-141
UUUGAGCCGAGGGGCCUUACGGAAACAUCAAGCAGCGCUAGCUGGAAACCGUAGUAAGCGAGCCCGCAACACGUGAAGGACUGACUGAAGCGUGAUGAAAUACUGAGCCCACUUCGCAAGGGGCAGUCAGGCAGUAGUAAU
...........((((..(((..........((((....).)))..........))).....)))).((.(((((......[[[[.....))))).))...((((..((((..........))))..]]]]..)))).....
[ "URS0000D6C39A_12908/1-141", "URS0000D66FBC_12908/1-139", "URS0000D667DD_12908/1-128", "URS0000D6735E_12908/1-140", "URS0000D6C8F2_12908/1-137", "URS0000D664A4_12908/1-140", "URS0000D68A6E_12908/1-138" ]
[ "UUUGAGCCGAGGGGC-CUUACGGAAACAUCAAG-CAGCGCUAGCUGGAAACCGUAGUAAGCGAGCCCGCAACACGUG-AAGGACUGACUGAAGCGUGAUGAAAUACUGAGCCCACUUCGCAAGGGGCAGU-CAGGCAGUAGUAAU", "GUUGAGCCGAGGGGC-CUUGCGGAAACGACAGA-CAGCGCUG-UCAGAAACCGUAGCAAGUGAGCCCGCACCACGUU-GACAGCUGAUGCGCUCGUGAUGAAAUACUGUGCCUU--UCGCAAGGGGCACUUCAGACAGUAGCUUA", "UAUGAGCCGAGGA...
rfam_14_5_mafft
URS0000D6C39C_12908_1-102
CGCUGUCGAGCUGUGGACGAUUAAACAGAGCACAAUCAAGCGGAAACUGUAAACCGCAUGUACAAAUAACAGAUAUAAAUGAUUGUCAGAAGGAGAACAAAG
....(((..[[[...)))..........]]].(((((..((((..........)))).......................))))).................
[ "URS0000D6C39C_12908/1-102", "URS0000D6CD66_12908/1-100" ]
[ "CGCUGUCGAGCUGUGGACGAUUAAACAGAGCACAAUCAAGCGGAAACUGUAAACCGCAUGUACAAAUAACAGAUAUAAAUGAUUGUCAGAAGGAGAACAAAG", "ACGGGUCUUGCCGAAGACCUUUAAAGACGGCACAAUCAGGCGGAAACUGUAAUCCGCAAUUACAAAUAACAGAUAUAAAUGAUUGUCAAAAGGAGAACAA--" ]
rfam_14_5_mafft
URS0000D6C3A4_12908_1-77
ACUGUGGAGUGCAUAAAAAAAUGUAAGUAGUAUAUUUAAUUUUAUAAAUUACAAAAGCAUGUACUAUGAAGCAGUAA
(((((...(((((........(((.....(((..((.........))..)))....))))))))......)))))..
[ "URS0000D6C3A4_12908/1-77", "URS0000D6849A_12908/1-69", "URS0000D69F8B_12908/1-66", "URS0000D6AD06_12908/1-74", "URS0000D6AD06_1262755/1-74", "URS0000D6B21F_12908/1-75", "URS0000D6C08A_12908/1-77" ]
[ "ACUGUGGAGUGCAUAAAAAAAUGUAAGUAGUAUAUUUAAUUUUAUAAAUUACAAAAGCAUGUACUAUGAAGCAGUAA", "ACUGUGGAGAGCAAAAAGAA-UACGAGUAGAUAAU-------UUUUUUUAUCAAAAGUAUGUUCGAUGAAGCAGUAA", "GCUGUGGAGAGCAAAACAAA-UGCGAGUAGACA----------UUUCAUGUCAAAAGCAUGUUCGUUGAAGCAGCAA", "ACUGUGGAGUGUACAGGAACUUGUAAGUAGUGAAU---UAUUUGAUAAUCACAAAAGCAUACACGG...
rfam_14_5_mafft
URS0000D6C3AE_12908_1-115
UAAUAGUGCAGAUAGUUAUACUAUGCUGUAUACCUAUGUAAACCGAAUUAACGUUUAAGCGGCAUGUAAUGUCGUCGGGCAUAGGGAGCCACCUUCGGGUGGCUUUUUUGUUUAG
......((((((((.......))).)))))..((((((....((((((....)))....(((((.....))))).))).))))))((((((((....))))))))..........
[ "URS0000D6C3AE_12908/1-115", "URS0000D69C50_12908/1-115", "URS0000D66F11_12908/1-115" ]
[ "UAAUAGUGCAGAUAGUUAUACUAUGCUGUAUACCUAUGUAAACCGAAUUAACGUUUAAGCGGCAUGUAAUGUCGUCGGGCAU-AGGGAGCCACCUUC--GGGUGGCUUUU---UUGUUUAG", "UAAUAUUGCAGGUAGGAAUAC---GCUGUAUACUCAUG-AAACCGAAUUAGCGUUUAAGCGACAUGUGUUGUCGUCGGACAUGAGGGAGCCACCUUUCGAGGUGGCUUUUGAAUUAUUU--", "UAAUAUUGCAGGUAGGAAUAC---GCUGUAUACUCAUG-AAACCGAAUUAGCGUUUAAGCG...
rfam_14_5_mafft
URS0000D6C3C3_12908_1-89
UGCAGGAGAAACCAUUAUGAGCGAAGCGAAUAAUUUAGGAUGGUUUCGACGAUAUGCCGCCGAACGGCUGUGGGGGGGCGAUACCCGAG
.......((((((..(((..((...))..))).........)))))).......((((.((..((....))..)).)))).........
[ "URS0000D6C3C3_12908/1-89", "URS0000D6CBD9_12908/1-87", "URS0000D6D025_12908/1-87", "URS0000D6CFC2_12908/1-89", "URS0000D666F4_12908/1-89" ]
[ "UGCAGGAGAAACCAUUAUGAGCGAAGCGAAUAAUUUAGGAUGGUUUCGACGAUAUGCCGCCGAACGGCUGUGGGGGGGCGAUACCCGAG", "AAGAGGAGGAACCAUUAUGACGAAGGC--AUACUUUAGCAUGGUUCCGACGCAAUGCCGCCGAACGAAUGUGAGGGGGCGAUACCAAUA", "AAGAGGAGGAACCAUUAUGACGAAGGC--AUAAUUUAGCAUGGUUCCGACGAAAUGCCGCCGAACGAAUGUGAGGGGGCGAUACCAAAA", "UGCAGGAGAAACCAUUAUGAGCGAAGCGAA...
rfam_14_5_mafft
URS0000D6C3CD_12908_1-76
AUAAUGAUACUUCUGCCGAGUCCCAGUUAUCGCAAGGACGGCAGCUCGCAUGAAGGGAGAGGUGAAACGCCUAUGU
............((((((....................))))))(((.(.....).)))(((.......)))....
[ "URS0000D6C3CD_12908/1-76", "URS0000D69B1B_12908/1-76", "URS0000D6CEAB_12908/1-76", "URS0000D67777_12908/1-76", "URS0000D6AE18_12908/1-76", "URS0000D6D2A7_12908/1-76", "URS0000D6D2A7_411902/1-76" ]
[ "AUAAUGAUACUUCUGCCGAGUCCCAGUUAUCGCAAGGACGGCAGCUCGCAUGAAGGGAGAGGUGAAACGCCUAUGU", "AUAAUGAUACUUCUGCCGAGUCCCAGACAUCGCAAGGACGGCAGCCUCCAUGACGGGGGAGGUGAGAUGCCUAUGU", "AUAAUGAUACUCCUGCCGAGUCCCAGACAUCGCAAGGACGGCAGCCCGCGUGAAGGGGGAGGUGAAAUUCCUGUGA", "AUAAUGAUACUUCUGCCGAGUCCCAGACAUCGCAAGGACGGCAGCCCGCAUGACGGGGGAGGUGAAAAG...
rfam_14_5_mafft
URS0000D6C3D2_12908_1-64
GCCCGGCGGCGGCAGGGCUUACACAGCCGCCCGGACGGUGACGGCCACCACCUAAAAACGCCUA
((((....[[[[[.)))).......]]]]]......((((........))))............
[ "URS0000D6C3D2_12908/1-64", "URS0000D6CC27_12908/1-64", "URS0000D674E4_12908/1-64", "URS0000D66BB5_12908/1-64", "URS0000D667EF_12908/1-64", "URS0000D6624F_12908/1-64", "URS0000D65B1B_12908/1-64", "URS0000D68920_12908/1-64", "URS0000D6B610_12908/1-64", "URS0000D68225_12908/1-64" ]
[ "GCCCGGCGGCGGCAGGGCUUACACAGCCGCCCGGACGGUGACGGCCACCACCUAAAAACGCCUA", "GCCCGGUUGCGGCAGGGCUUACACAGCCGCACAGACGGUGACGGCCACCACCUUAAAACGCCUA", "GCCCGGCUGCGGCAGGGCUUACCCAGCCGCACAGACGGUGACGGCCACCACCUAAAAACGCCUA", "GCCCGGCUGCGGCAGGGCUUACACAGCCGCACAGACGGUGACGGCCACCACCUAAAAACGCCUA", "GCCCGGCUGCGGCAGGGCUUACACAGCCGCACAGA...
rfam_14_5_mafft
URS0000D6C3DF_12908_1-70
ACUACGAAUCCUUGUCCGGAUUCCUCUAUUCACGCACGUCGGGUCGGGACGAGCCCUUGACCGCUAGCGA
.....((((((......))))))......((.(....(((((..............))))).....).))
[ "URS0000D6C3DF_12908/1-70", "URS0000D69EB6_12908/1-60" ]
[ "ACUACGAAUCCUUGUCCGGAUUCCUCUAUUCACGCACGUCGGGUCGGGACGAGCCCUUGACCGCUAGCGA", "ACUAUGA---UCCAUGCGGAUCC-----UCUAUGCGCGUAUCGUUCGGACGAGCC--GAACCGCUAGCGC" ]
rfam_14_5_mafft
URS0000D6C3E2_446468_1-267
CCCGUCCGGGUCCGUGGUUGCGUCGGAGUCUGCGAGCUCCCGGGAACACCGGGGCGCCGCUCCGGCAAGCCGAUGCCAGGCGCAGGCGAAACGGCCCACGUAAGGCGACUUUUCGUCGACCGAUCACGGUGCGCCUUAGAGGUAAGCCCUGCCCCGCGGAGGGUCCAGAUGUCCCUCAUGACAGGGAGAAGAGCAGUAGUCGCGAUCAAGAGCGGCGACACUCUCAGCAGGCGGAUGUGGGGACGAAGACCAGGUCGGCCGGACGGG
(((((((((..((((((((..................................................(((.((((.[[[[[[))))...)))((((((.............................]]]]]].............(((((((............................)))...((((.....(((((........)))))....))))..)))).....))))))......)))))...))))))))))))
[ "URS0000D6C3E2_446468/1-267", "URS0000D66B04_12908/1-256", "URS0000D68E41_12908/1-256", "URS0000D6737B_471852/1-259", "URS0000D6CDB5_12908/1-264", "URS0000D6926E_12908/1-243", "URS0000D6A2C8_469371/1-253", "URS0000D6B89B_12908/1-250", "URS0000D6BDE9_12908/1-250", "URS0000D6B1D0_479432/1-253" ]
[ "CCCGUCCGGGUCCGUGGUUGCGUCGGAGUC-UGCGAGCUCCCGGGAACACCGGGGCGCCGCUCCGGCAAGCCGAUGCCAGGCGCAGGCGAAACGGCCCACGUAAGGCGACUUUUCGUCGACCGAUCACGGUGCGCCUUAGAGGUAAGCCCUGCCCCGCGGAG-GGUCCAGAUGUCCCUCAUGACAGGGAGAAGAGCA-GUAGUCGCGAUCA--------AGAGCGGCGACACUCUCAGCAGGCGGAUGUGGGGACGAAGACCAGGUCGGCCGGACGGG", "CCCGCCCGGGUCCGUGGUUGCGCCGGAAUG-...
rfam_14_5_mafft
URS0000D6C3F3_12908_1-59
CCCUGACUAAUUGUUCCACAUGGAACAUUAGACUCUAGCCACGACAGGAGAAUCAAAUG
.((((.(((((...............))))).............))))...........
[ "URS0000D6C3F3_12908/1-59", "URS0000D6698C_12908/1-58", "URS0000D6900D_12908/1-59", "URS0000D6934F_12908/1-59", "URS0000D6A042_12908/1-59", "URS0000D68F4D_12908/1-59" ]
[ "CCCUGACUAAUUGUUCCACAUGGAACAUUAGACUCUAGCCACGACAGGAGAAUCAAAUG", "UCCUGACUGA-UGUUUCAUGUGGAACAUUAGACACUAGCCAAGACAGGAGAUAAUAAUG", "UCCUGACUAAUUGUUCCACAUGGAACAUUAGACACUAGCCAAGACAGGAGAUAAUAAUG", "CCCUGACUAAUUGUUCCACAUGGAACAUUAGACACUAGCCAAGACAGGAGAAUCACAUG", "CCCUGACUAAUUGUUCCAUGUGGAACAUUAGACUCUAGCCACGACAGGAGAAUCA...
rfam_14_5_mafft
URS0000D6C425_12908_1-49
GCGGGCACACGCGGACGCCCGACCAGACGGUUUGCCGUCCAAGCUCCGC
.(((((....[[[[[.)))))....(((((....))))).....]]]]]
[ "URS0000D6C425_12908/1-49", "URS0000D6C257_12908/1-47", "URS0000D6687C_12908/1-48", "URS0000D67763_12908/1-49", "URS0000D6975C_12908/1-49" ]
[ "GCGGGCACACGCGGACGCCCGACCAGACG-GUUUGCCGUCCAAGCUCCGC", "-UCGGGCAACGCGGACGCCCGGUUAGAC--GACUUCCGUCCAAGCUCCGC", "GCGGGCUCACGCGGACGCCCGGUCAGAC--GCUUGCCGUCCAAGCUCCGC", "GGGGGCAAACGCGGACGCCCGUCCAGACG-GCUUGCCGUCCAAGAUCCGC", "-CCGGGCCAUGCGGACGCCCGAUCAGUCGCCCUGGGCGUCCAAGCUCCGC" ]
rfam_14_5_mafft
URS0000D6C437_12908_1-79
AAGCCUUGAGGACGGAACGGGCCGCCGUCGCCCCCAAUUUAGGGUUAGGAGAUGCAGGAAUGUCACCCUGCCAAGGUUG
.(((((((..(((((....[[[..))))).((((.......)))....)....(((((...]]]..)))))))))))).
[ "URS0000D6C437_12908/1-79", "URS0000D681FE_12908/1-74", "URS0000D66312_12908/1-79", "URS0000D66698_12908/1-70", "URS0000D65E72_12908/1-69" ]
[ "AAGCCUUGAGGACGGAACGGGCCGCCGUCGCCCCCAAUUUAGGGUUAGGAGAUGCAGGAAUGUCACCCUGCCAAGGUUG", "GAACCUUGAGGACGGAACGGGCAGCCGUCGCCCCUUAU----GGGUAGGAGAUGCGGGAAGGUCACCCGCCGGGUUUC-", "AAACUUUGAGGACGGAACGGGCCGCCGUCGCCCCAGUUUAUGGGUUCGGAGAUGCAGGAAUUUCACCCUGCCUGAAUUU", "AAAGAUAGAGGACGGAACGGGCAGCCGUCGCCUUU---------AUUGGAGAUGCGGGAG...
rfam_14_5_mafft
URS0000D6C440_1206781_1-83
GAUCAUUGAGGUGGGAAAGGUUCCCCACGCGCUUGCUGAAAAGCAAGUUACCAGAGAUCAGGAUACGCCGCCCUGCUAUGAUC
((((((.(..(((((...[[[..))))).(((((((......)))))).....).....(((....]]]..))).).))))))
[ "URS0000D6C440_1206781/1-83", "URS0000D6C24D_12908/1-80", "URS0000D6BB03_1185653/1-80", "URS0000D6A0E5_1036171/1-82", "URS0000D69965_12908/1-83" ]
[ "GAUCAUUGAGGUGGGAAAGGUUCCCCACGCGCUUGCUGAAAAGCAAGUUACCAGAGAU-CAGGAUACGCCGCCCUGCUAUGAUC-", "GGUUAUUAAGGUGGGAAAGGUUCCCCACGCGCUCAC-----GAUGAGUUAUCAGAGAUCCUGGAUACGCCGCCCAGGUAAUAACC", "GGUUAUUAAGGUGGGAAAGGUUCCCCACGCGCUCAC-----GAUGAGUUACCAGAGAUCCUGGAUACGCCGCCCAGGUAAUAACC", "AGCCAAUGAAGUGGGAAAGGUUCCCGGCGCGCUUGCU-UAUA...
rfam_14_5_mafft
URS0000D6C44E_12908_1-81
AAUUGCCAAGGUCGGAAAUGGUUCCCGACACACUCCGAAAAGAGUAUCUGAGAUGAUGGAUACACCGCCCAUCUGGUGAUU
((((((((..(((((...[[[[..))))).(((((......))))....)....(((((....]]]].)))))))))))))
[ "URS0000D6C44E_12908/1-81", "URS0000D6864A_12908/1-78", "URS0000D687E0_12908/1-78", "URS0000D6945F_12908/1-78", "URS0000D6874A_12908/1-78", "URS0000D66CA5_12908/1-78", "URS0000D68096_12908/1-78", "URS0000D68096_537007/1-78", "URS0000D6D1BC_658082/1-78", "URS0000D67D5F_12908/1-78" ]
[ "AAUUGCCAAGGUCGGAAAUGGUUCCCGACACACUCCGAAAAGAGUAUCUGAGAUGAUGGAUACACCGCCCAUCUGGUGAUU", "AGUAGCAAAGGUCGGAAA-GGCCCCCGACACACUC--GUAAGAGUACCUGAGAUGAUGGAUACGCCGCCCAUCUUGUUGCU", "AGUAGCAAAGGUCGGAAA-GGCUCCCGACACACUC--ACAAGAGUACCUGAGAUGAUGGAUACGCCGCCCAUCUUGUUACU", "GAUUGCAAAGGUCGGAAA-GGCUCCCGACACACUC--GCAAGAGUACCUGAGAU...
rfam_14_5_mafft
URS0000D6C44F_12908_1-60
AGCUUAGUACAGAGCGUAAUCAUGUACACGGAAGAGAAGCAACCUCGUAUAAAAAGCGUA
.(((...[[[[.))).......]]]].......(((.......)))..............
[ "URS0000D6C44F_12908/1-60", "URS0000D6C101_12908/1-59", "URS0000D691A5_12908/1-59", "URS0000D68CF4_12908/1-59", "URS0000D6999E_12908/1-59" ]
[ "AGCUUAGUACAGAGCGUAAUCAUGUACACGGAAGAGAAGCAACCUCGUAUAAAAAGCGUA", "AGCUUAGUACAGAGCGUAACCAUGUACACGGAAGAGAAGCAACCUCGUAU-AAAAGCGUA", "AGCUUAGUACAGAGCGUAAUCAUGUACACGGAGGAGAAGCAACCUCGUAU-AAAAGCGUA", "AGCUUAGUACAGGGCGUAAUCAUGUACACGGAGGAGAAGCAACCUCGUAU-AAAAGCGUA", "AGCUUAGUACAGAGCGUAAUCAUGUACACGGAAGAGAAGCAACCUCGUAU-...
rfam_14_5_mafft
URS0000D6C454_12908_1-543
UAUUUGAAUCAUCACUGCGGUCAACUCGAUGAACAAAGCACGCCAGUGCUUCGAGGUGCACGGUACUUUCAGGUUGAUUAAGUUGGGAUGCUAAUUUAUGAGGUCUGUCUCAAGAUAGCGAUAUCUUGAGAGGAGGCAGAAACUGCCAACAAAAACGUGUAUCGCAGAAGUAUUCGCAUCAAAAAGUUUGGAGCUUCCGGGUGCAGCAAUAGACGCUCACUGUGUGAGAAUAACCCUAAGGGGUGUUGGUGUGGCAACCAACAUGACGGAGGGAAGCCAAGAAUGCACAUUGCCUUGAGACGGAGAAAUCCGUGUAUAAC...
.......(.......(...(.(..(((((.......(((((....)))))))))).((((((........(((((...((((((((....))))))))...))))).((((((((((....))))))))))...(((((...)))))........))))))............(.....(.(..((..((..(((((((.(((((..........((((.....)))).....((((.....(((((((..[[[[..))))))).....))))..]]]]....))))).[[[[[.....(((((....)))))......)...
[ "URS0000D6C454_12908/1-543", "URS0000D6945E_12908/1-543" ]
[ "UAUUUGAAUCAUCACUGCGGUCAACUCGAUGAACAAAGCACGCCAGUGCUUCGAGGUGCACGGUACUUUCAGGUUGAUUAAGUUGGGAUGCUAAUUUAUGAGGUCUGUCUCAAGAUAGCGAUAUCUUGAGAGGAGGCAGAAACUGCCAACAAAAACGUGUAUCGCAGAAGUAUUCGCAUCAAAAAGUUUGGAGCUUCCGGGUGCAGCAAUAGACGCUCACUGUGUGAGAAUAACCCUAAGGGGUGUUGGUGUGGCAACCAACAUGACGGAGGGAAGCCAAGAAUGCACAUUGCCUUGAGACGGAGAAAUCCGUGU...
rfam_14_5_mafft