id
stringlengths
12
30
sequence
stringlengths
12
4.38k
secondary_structure
stringlengths
12
4.38k
aligned_ids
listlengths
1
10
aligned_sequences
listlengths
1
10
split
stringclasses
4 values
URS0001A24391_12908_1-33
CUCUGUUCCAGAAAAAAUGGUUCAGGGCGGGAG
(((((..(((.......)))..)))))......
[ "URS0001A24391_12908/1-33", "URS0001A23BFE_12908/1-33", "URS0001A23BFE_1623/1-33", "URS0001A23ABB_1572701/1-30", "URS0001A23B2A_459472/1-28", "URS0001A23B2A_1499687/1-28", "URS0001A2360A_1123290/1-31", "URS0001A2360A_263475/1-31", "URS0001A2360A_1227360/1-31", "URS0001A2353B_12908/1-32" ]
[ "CUCUGUUCCAGAAAAAAUGGUUCAGGGCGGGAG----", "CUCUGAUCCAG--CAAAUGGUUCAGGGCAAAGGAG--", "CUCUGAUCCAG--CAAAUGGUUCAGGGCAAAGGAG--", "CUCUGUUCCAG-----AUGGUUCAGGGCAAGGGAG--", "CUCUGUUCCAG-----AUGGUUCAGGGCGGGAG----", "CUCUGUUCCAG-----AUGGUUCAGGGCGGGAG----", "CUCUGUUCCAG-----AUGGUUCAGGGCGAAAGGAG-", "CUCUGUUCCAG---...
rfam_14_5_mafft
URS0001A243A5_12908_1-107
CCUGCACGGCUAGACCGCAGGUCGGGAUGUGAUCCGCGAGCGUGCAUGCGAUACGAGGCGCUCGAGAGAGGUGACAGCGGUUGUCGCCGAGGCGAUUGAACCAGGAA
(((((...........)))))..((.....((((...........................................................))))...)).....
[ "URS0001A243A5_12908/1-107", "URS0001A24607_12908/1-96" ]
[ "CCUGCACGGCUAGACCGCAGGUCGGGAUGUGAUCCGCGAGCGUGCAUGCGAUACGAGGCGCUCGAGAGAGGUGACAGCGGUUGUCGCCGAGGCGAUUGAACCAGGAA", "CCUGCACGGCUAGACCGCAGGUCGGGAUGUGAUCCGCGAGCG-----------CGAUACGCUCGAGAGAGGUGACAGAUGCUGUCACCGACGCGAUUGAACCAGGAA" ]
rfam_14_5_mafft
URS0001A243B0_12908_1-53
CGGGAUUAGGUCCCGUUGGAAUGUGGUCCUGUAGGGCAGGGCUGAACCAUGAA
(((((.....)))))..((.....(((((.........)))))...)).....
[ "URS0001A243B0_12908/1-53", "URS0001A23C37_12908/1-47", "URS0001A2489B_1434107/1-52", "URS0001A23AAB_12908/1-52", "URS0001A23350_12908/1-52", "URS0001A24259_1434110/1-52", "URS0001A24344_12908/1-52", "URS0001A244C7_12908/1-52", "URS0001A23670_12908/1-53", "URS0001A23670_523844/1-53" ]
[ "CGGGAUUAGGUCCCGUUGGAAUGUGGUCCUGUAGGGCAGGGCUGAACCAUGAA", "-CGGGGUACGCCCCGGUGGGAUGUGGCCC-----GAAAGGGCUGAACCGUAAA", "CGGGAUUAGGUCCCGUUGGAAUGUAGUCCUGCA-GGCAGGGCUGAACCGUGAA", "CGGGAUUAGAUCCCGUUGGAAUGUGGUCCUGCA-GGCAGGGCUGAACCGUGAA", "CGGGAUUAGGUCCCGUUGGGAUGUGGUCCUGCA-GGCAGGACUGAACCGUGAA", "CGGGAUUAGAUCCCGUUGGG...
rfam_14_5_mafft
URS0001A243B6_1122972_1-44
GAUUGCCUAUAAACUAUCAAUCUCUCACAUAGCAAUCGCGGCUG
((((((.........................)))))).......
[ "URS0001A243B6_1122972/1-44", "URS0001A23E55_12908/1-33", "URS0001A243B6_12908/1-44", "URS0001A243B6_1030843/1-44", "URS0001A243B6_111105/1-44", "URS0001A243B6_1211023/1-44", "URS0001A24601_1321822/1-44", "URS0001A23C7C_12908/1-39", "URS0001A24A2B_12908/1-39", "URS0001A2472E_12908/1-39" ]
[ "GAUUGCCUAUAAACUAUCAAUCUCUCACAUAGCAAUCGCGGCUG", "GAUUAUACCUAAAUCCUCUC-----------AUAAUCGCGGCUA", "GAUUGCCUAUAAACUAUCAAUCUCUCACAUAGCAAUCGCGGCUG", "GAUUGCCUAUAAACUAUCAAUCUCUCACAUAGCAAUCGCGGCUG", "GAUUGCCUAUAAACUAUCAAUCUCUCACAUAGCAAUCGCGGCUG", "GAUUGCCUAUAAACUAUCAAUCUCUCACAUAGCAAUCGCGGCUG", "GAUUGCCUAUAAACU...
rfam_14_5_mafft
URS0001A243BD_12908_1-67
UAUCUUUGCCGGCUCAAUGAGAUCACCUCAUUGAAUACAUAAAAACUAUUUAAAUAAUAUUGGCAUG
.............((((((.........)))))).................................
[ "URS0001A243BD_12908/1-67", "URS0001A2482F_12908/1-65", "URS0001A24192_12908/1-57", "URS0001A23D62_1392489/1-67", "URS0001A23576_12908/1-67", "URS0001A24630_12908/1-67", "URS0001A246DA_12908/1-57", "URS0001A23E88_12908/1-57", "URS0001A23BE4_12908/1-57", "URS0001A248BA_12908/1-65" ]
[ "UAUCUUUGCCGGCUCAAUGAGAUCACCUCAUUGAAUACAUAAAAACUAUUUA-AAUAAUAUUGGCAUG", "UAUCUUUGCCGGCUCAACGGGAAAACCCCGUU--AUACAUAAAAACUAUUUA-AAUAAUAUUGGCAUG", "UAUAUUUGCGGCUUCAUAAUAUGA-----------UACAUAAAAACUAUUAACAUUAAUAUUGGCAUG", "UAUCUUUGCCGGCUUAAUGAGAUAGACUCAUUAAAUACAUAAAAACUAUUUA-AAUAAUAUUGGCAUG", "UAUCUUUGCCGGCUCAACG...
rfam_14_5_mafft
URS0001A243BE_1033743_1-38
CUCUGGUCUGCGGGCUUAAGGGAUCAGGGCGGAAAGAG
((((((((.............)))))))).........
[ "URS0001A243BE_1033743/1-38", "URS0001A23D03_1220558/1-35", "URS0001A23D03_944559/1-35", "URS0001A239C8_1122921/1-35", "URS0001A239C8_1122922/1-35", "URS0001A241D2_1121346/1-34", "URS0001A241D2_12908/1-34", "URS0001A23C7B_12908/1-35", "URS0001A2498D_12908/1-32", "URS0001A24147_1274374/1-34" ]
[ "CUCUGGUCUGCGGGCUUAAGGGAUCAGGGCGGAAAGAG", "CUCUGGUUCG---ACGAAUAGAUCCAGGGCGGAAAGAG", "CUCUGGUUCG---ACGAAUAGAUCCAGGGCGGAAAGAG", "CUCUGGGUGG---ACUAAGAAACUCAGGGCGGAAAGAG", "CUCUGGGUGG---ACUAAGAAACUCAGGGCGGAAAGAG", "CUCUGGUCCC---G-CAUGAGGUCCAGGGCGGAAAGAG", "CUCUGGUCCC---G-CAUGAGGUCCAGGGCGGAAAGAG", "CUCUGGG...
rfam_14_5_mafft
URS0001A243CB_797210_1-74
GUGGGAAGCGCACGGCCGCAAAUCUGACUGCGUCACCGACUGCUAUUCGAGGUGACUUGGGAUUGCGGAAGUGC
.........((((..((((((..((......((((((.............))))))...)).))))))..))))
[ "URS0001A243CB_797210/1-74", "URS0001A23F9F_12908/1-64", "URS0001A23880_12908/1-63", "URS0001A24057_1261545/1-66", "URS0001A238F3_12908/1-63", "URS0001A235EE_12908/1-56", "URS0001A23F2D_12908/1-63", "URS0001A235C8_12908/1-63", "URS0001A2471E_12908/1-63", "URS0001A246F9_12908/1-63" ]
[ "GUGGGAAGCGCACGGCCGCAAAUCUGACUGCGUCACCGACUGCUAUUCGAGGUGACUUGGGAUUGCGGAAGUGC", "GAUGGAACUGCACGGCCGCAAAUCUGAC----UCGUUGGGUGUUAC------CAACUUGGGAUUGCGGAAGUGC", "GUGGGAACGGCACGGCCGCGAAUCCGAC-CUGUC---CCC-------GUCUGGGGCUUGGGAUCGCGGCAGUGC", "UAGGGAACUGCACGGCCGCAUAUCCGAC-GCGCCACGCGU-------UCGCGUGGCUUGGGAGUGUGGCAGUGC"...
rfam_14_5_mafft
URS0001A243D4_746697_1-69
UACUUUUGCAACCUUGAUUAUCAAAACGGUAAUCGAUACAUAAAAAUCAUUUACACAAAUAUUAGCAUG
.............((((((...........)))))).................................
[ "URS0001A243D4_746697/1-69", "URS0001A2373A_12908/1-68", "URS0001A24277_1120951/1-68", "URS0001A249B8_12908/1-68", "URS0001A249B8_171194/1-68", "URS0001A24672_12908/1-68", "URS0001A24A0C_12908/1-68", "URS0001A2416A_12908/1-68", "URS0001A23AEC_12908/1-68", "URS0001A2372E_12908/1-68" ]
[ "UACUUUUGCAACCUUGAUUAUCAAAACGGUAAUCGAUACAUAAAAAUCAUUUACACAAAUAUUAGCAUG", "UAUUUUUGCAGCCGUAUUCCGAAAGACGG-AACACAUACAUAACAAUUAUUUACAUAAAUAUUAGCAUG", "UAUCUUUGCCGCCUUGAUUAUCAAAACGGUAGUCAGUACAUAAUAAUCAUUUUAAC-AAUAUUGGCAUG", "UACUUUUGCACCCUUGAUUAUCAAAAAGGUAGUCAGUACAUAAAAAUCAUUUUAAC-AAUAUUGGCAUG", "UACUUUUGCACCCUU...
rfam_14_5_mafft
URS0001A243DF_12908_1-94
CUGAUGGUGGCGCAAGGGUGGAACUCGGAGUCGAGUGCCCGGUGCCCCUCCUCACCAAGAAAACGGUGAGACGAGGGCAGCGCCUGAACGUCAG
(((((...(((((..((((...(((((....)))))))))..(((((...((((((........))))))....)))))))))).....)))))
[ "URS0001A243DF_12908/1-94", "URS0001A2447C_12908/1-94" ]
[ "CUGAUGGUGGCGCAAGGGUGGAACUCGGAGUCGAGUGCCCGGUGCCCCUCCUCACCAAGAAAACGGUGAGACGAGGGCAGCGCCUGAACGUCAG", "CUGAUGGUGGCGCAAGGGUAGAACUCGGAGUUGAGUGCCCGGUGCCCCUCCACACCAAGAGAACGGUGAGACGAGGGCAGCGCCUGAACGUCAG" ]
rfam_14_5_mafft
URS0001A243E5_1463845_1-53
GCCACUGCUGACCAGUGGCGCCCUGACACCGGUACCUGACACGGCCGGUGCAG
(((((((.....)))))))...(((.(((((((..........))))))))))
[ "URS0001A243E5_1463845/1-53", "URS0001A23984_1210045/1-53" ]
[ "GCCACUGCUGACCAGUGGCGCCCUGACACCGGUACCUGACACGGCCGGUGCAG", "GCCACUGCUGACCAGUGGCACCCUGACACCGGUACCUGACACGGCCGGUGCAG" ]
rfam_14_5_mafft
URS0001A243E7_12908_1-103
CUGAAGAGCGCGUUCGGGUCACUUGCGGACUGCAACACCCGAUCUCUCUCCUGGUGCCGCCGUCGAUGGCGACACCCGCGGAGGGAGAGCGCGUCACCAUCAG
((((....(((((..((((...(((((...))))).))))..(((((((((............................))))))))))))))......))))
[ "URS0001A243E7_12908/1-103", "URS0001A2497E_12908/1-100", "URS0001A2440B_12908/1-100", "URS0001A2425D_12908/1-100", "URS0001A23EFA_12908/1-100", "URS0001A2487A_12908/1-100", "URS0001A243A2_797299/1-100", "URS0001A240AD_12908/1-100", "URS0001A238CF_12908/1-97", "URS0001A23503_1069082/1-103" ]
[ "CUGAAGAGCGCGUUCGGGUCACUUGCGGACUGCAACACCCGAUCUCUCUCCUGGUGCCGCCGUCGAUGGCGACACCCGCGGAGGGAGAGCGCGUCACCAUCAG", "CUGAUGGGCGCGUCCGGGUCAAUUGCGGUCUGCAACACCCAAUCUCGCUACCGGUGCCGGAUGGACUGGCAGCC---GGCGAGCGUGAGCGCGUCACCGUCAG", "CUGAUGGGCGCGUCCGGGUCAAUUGCGGUAUGCAACACCCGAUCUCUCUCCACGUUCCAGACAGUCUGGACGUG---GCUCAGGGAGAGCGCGUGAC...
rfam_14_5_mafft
URS0001A243E8_12908_1-95
GGGCACCUACGGGGGCCUAUAAACAUGGUGGGAUCAAAUCCCACCCUACAUAGGUGGGGCGAAAUCCCUGCCGUUUGCUAAACGGAAGACAGAAA
((((.(((...)))))))........((((((..................................)))))).......................
[ "URS0001A243E8_12908/1-95", "URS0001A23A6A_12908/1-89", "URS0001A23BB6_12908/1-90" ]
[ "GGGCACCUACGGGGGCCUAUAAACAUGGUGGGAUCAAAUCCCACCCUACAUAGGUGGGGCGAAAUCCCUGCCGUUUGCUAAACGGAAGACAGAAA", "GGGGACCUUCGGGGCCCUAUACCAACGGUGGGUUUCA--CCCACCCUACAUA-AGACGGGGAAACCC---GUCUAAGCUAAACGGAAGACAGAAA", "GGGGACCUUCGGGGCCCUUUAACCAAAGGUGGGUCCG--CCCAUCCGACAUACAGGCGGGGCAACCC---GCCGCUAGCUAACGGAAGACAGAAA" ]
rfam_14_5_mafft
URS0001A243EB_12908_1-51
CGGGACCAGUCCCGUUAAGGAAUGUGGCCUGAUAUCAGGCUGAACCUUUGG
(((((....)))))....((.....(((((......)))))...)).....
[ "URS0001A243EB_12908/1-51", "URS0001A244CC_12908/1-50", "URS0001A238AA_12908/1-49" ]
[ "CGGGACCAGUCCCGUU--AAGGAAUGUGGCCUGAUAUCAGGCUGAACCUUUGG", "CGGGAUUCGUCCCGUUCAAAGGAAUGUAGCCUUA---CCGGCUGAACCUUGAG", "CGGGAUUAGUCCCGUU---AGGUAUGUGGCCUGA-AAAAGGCUGAACCUGGAG" ]
rfam_14_5_mafft
URS0001A243EC_191610_1-126
ACUCAGGCACGAUCCUGCCCGGCGUGGUGCGUGUGCGCACGCGCCAGGGCGUGGUCCUAAGAAUAUGAGGGAUUGCACGCCCGCCACGUGGGGCGGGAACCGACCUGAAGUGUCAACCCUGAGGGA
(((((((.....(((((((..........((((...................................................))))...))))))).....)))).)))...............
[ "URS0001A243EC_191610/1-126", "URS0001A24370_1121354/1-51" ]
[ "ACUCAGGCACGAUCCUGCCCGGCGUGGUGCGUGUGCGCACGCGCCAGGGCGUGGUCCUAAGAAUAUGAGGGAUUGCACGCCCGCCACGUGGGGCGGGAACCGACCUGAAGUGUCAACCCUGAGGGA", "ACUCAGGCACGGUCC--------------------------------------------------------------------------GAACGGGGAACCGACCUGAAGU-UCAAUCCUGAGGGA" ]
rfam_14_5_mafft
URS0001A243F3_12908_1-47
UGGGGGCCCCCCAUUGGAUGUGGCCCAUUUGGAGGCUGAACAAAUCA
(((((...))))).((.....((((........))))...)).....
[ "URS0001A243F3_12908/1-47", "URS0001A23D32_12908/1-46" ]
[ "UGGGGGCCCCCCAUUGGAUGUGGCCCAUUUGGAGGCUGAACAAAUCA", "-UGGGGGCCCCCAUUGGAUGUGGCCCAUUUGGAGGCUGAACAAAUCA" ]
rfam_14_5_mafft
URS0001A243F5_436229_1-57
CGUCCGGGCAACAGUGCCCGUACGCCCGCCCCGGUACCUGGUACGGCCGGGGGUCGG
(((.(((((......))))).))).((((((((((..........)))))))..)))
[ "URS0001A243F5_436229/1-57", "URS0001A23682_1463833/1-52", "URS0001A2386B_1444768/1-53", "URS0001A246CF_1449347/1-53", "URS0001A242F5_105422/1-56", "URS0001A23D90_105425/1-56", "URS0001A24079_1449346/1-56", "URS0001A24181_2065/1-55", "URS0001A2383D_68244/1-56", "URS0001A2383D_1678027/1-56" ]
[ "CGUCCGGGCAACAGUGCCCGUACGCCCGCCCCGGUACCUGGUACGGCCGGGGGUCGG", "---ACGGGC-ACAGUGCCCGUGCGCCCGCUGCGGUACCUGGUACGGCCGCAGUCGG-", "---CCGGGCAACAGUGCCCGGCCGCCCGCUGCGGUACCUGACACGGCCGCAGUCGG-", "---CCGGGCAACAGUGCCCGGCCGCCCGUUCCGGUACCUGAUACGGCCGGAUUCGG-", "-GUAGCGGCAACAGUGCCGCUGCGCCCGCCCCGGUACCUGGUACGGCCGGGGGUCGG", "...
rfam_14_5_mafft
URS0001A24401_12908_1-79
CUCGCCGCCGGGAACGUCGGUUCGGUCGACGCACGCCCGGGACGAGACGACAUGUGGCCCCUCGCGGCUGAAUCGCAAC
((((......................................))))..((.....((((......))))...)).....
[ "URS0001A24401_12908/1-79", "URS0001A2344D_12908/1-74", "URS0001A23433_1230454/1-78", "URS0001A23ED5_12908/1-62" ]
[ "CUCGCCGCCGGGAACGUCGGUUCGGUCGACGCACGCCCGGGACGAGACGACAUGUGGCC-CCUCGCGGCUGAAUCGCAAC", "CUCGCCGCCGG----ACGGGCGCG--ACACGCCCGCGCGGGACGAGACGACAUGUGGCCGGGGACCGGCCGAAUCGCAAG", "CUCGCCACCGGCGCCGGGGACGCG--CUCCCUGUGCCCGGGACGAGACGACAUGUGGCCGCCUCGCGGCUGAAUCGCAAC", "CUCGCCGCCGA----------------GCCGGACGCUCGGGACGAGACGACAUGUGG...
rfam_14_5_mafft
URS0001A2440E_12908_1-65
GGGUCAGGAAACUGACCCCAAACAUAAGGCGGGGUAACCCGUCUAAGCUAAACGGAAGACAGAAA
(((((((....))))))).........((((((....))))))......................
[ "URS0001A2440E_12908/1-65", "URS0001A24109_12908/1-61" ]
[ "GGGUCAGGAAACUGACCCCAAACAUAAGGCGGGGUAACCCG--UCUAAGCUAAACGGAAGACAGAAA", "GGGUCCAG----CGACCCCAAACAC-AGGCGGGACCACCCGCCUUUUAGCU-AACGGAAGACAGAAA" ]
rfam_14_5_mafft
URS0001A2441E_1089548_1-34
CUCUGAUUCCCAAGUUGAAUCAGGGCGGAAAGAG
((((((((.........)))))))).........
[ "URS0001A2441E_1089548/1-34", "URS0001A2441E_1288971/1-34", "URS0001A24765_12908/1-32", "URS0001A24A0F_157733/1-32" ]
[ "CUCUGAUUCCCAAGUUGAAUCAGGGCGGAAAGAG", "CUCUGAUUCCCAAGUUGAAUCAGGGCGGAAAGAG", "CUCUGUUUCGUAA--UGAAUCAGGGCGGAAGGAG", "CUCUGUUUCCUCA--GGAAUCAGGGCGGAAGGAG" ]
rfam_14_5_mafft
URS0001A24420_1577905_1-76
GGGCACCUUCGGGGGCCUUUAACCAUAGGCGGGGGUGAUCGCACCCAUCGUCGUUUAGCAAAACGGAAGACAGUAA
((((.(((...))))))).........(((((...............)))))........................
[ "URS0001A24420_1577905/1-76", "URS0001A23318_12908/1-66", "URS0001A23F56_12908/1-66", "URS0001A23B05_391595/1-68", "URS0001A24622_12908/1-67", "URS0001A23FA4_12908/1-69", "URS0001A23EBA_12908/1-72", "URS0001A23CDF_12908/1-65", "URS0001A233A7_391613/1-64", "URS0001A236C0_314264/1-64" ]
[ "GGGCACCUUCGGGGGCCUUUA-ACCAUAGGCGGGGGUGAUCGCACCCAUCGUCGUUUAGCAAAACGGAAGACAGUAA", "GGCCACCUACGGGGGGCUUUA---CAUAGCGGG-------AGCAACUGCUCUCGCCCAGA-CAACGGAAGACAGUAA", "UGGAACCUUCGGGGUCCUUUA-ACCAUAGCAG--------GCCAAUCGCCUGCGUUUAA--AAGCGGAAGACAGUAA", "GGGCACCUACGGGGGCCUUCAUACCAUCGCCG------GGGAGACCCGGCG---CAUAGCAAAACG...
rfam_14_5_mafft
URS0001A24428_12908_1-98
GGUCACCUGUUCAGCCAAUGGCGCUCAGGGGGCUUUACACCAAGGCGGUGAUCUCGGGCGAACUCGGGGCAUCGCUUAUGCUAAACGGAAGACAGAAA
((((.(((...................))))))).........(((((((...................)))))))......................
[ "URS0001A24428_12908/1-98", "URS0001A2323B_12908/1-91", "URS0001A24034_12908/1-91", "URS0001A23913_12908/1-91", "URS0001A248AF_12908/1-38", "URS0001A24A69_12908/1-38" ]
[ "GGUCACCUGUUCAGCCAAUGGCGCUCAGGGGGCUUUAC-ACCAAGGCGGUGAUCUCGGGCGAACUCGGGGCAUCGCUUAUGCUAAACGGAAGACAGAAA", "GGUCACCUGCUCA--------CAUGCAGGGGGCUUUACUUUCCAGGGGAUGAUAUCGGGUAAACUCGGUGCAUCACCUGAGCUAAACGGAAGACAGAAA", "GGUCACCUGCACA--------AAUGCAGGGGGCUUUACUUUCCAGGGGAUGAUGCCGGGUAAACUCGGUGCAUCACCUGAGCUAAACGGAAGACAGAAA", "...
rfam_14_5_mafft
URS0001A2442F_12908_1-65
CUGUAAAGACAUGGUGAGUCGUAGGACCAUCUCCAUAAUUGCAGAAUGGGACAUGUCUCGAUGAA
.......(((((((((.(((....)))))).(((((.........))))).))))))........
[ "URS0001A2442F_12908/1-65", "URS0001A236AC_12908/1-63", "URS0001A23558_12908/1-63", "URS0001A23A2C_1441735/1-63", "URS0001A23A2C_1441732/1-63", "URS0001A23A2C_1226633/1-63", "URS0001A23A2C_1441734/1-63", "URS0001A23A2C_556263/1-63", "URS0001A232B0_12908/1-63", "URS0001A232B7_12908/1-63" ]
[ "CUGUAAAGACAUGGUGAGUCGUAGGACCAUCUCCAUAAUUGCAGAAUGGGACAUGUCUCGAUGAA", "CUGUAAAGACAUGGUGAGUCGUAGGACCAUCUCCAUAAUUGCAGAAUGGGACAUG--UCGAUGAA", "CUGUAAAGAUAUGGUGAGUCGUAGGACCAUCCCCAUAAUCGCAGAAUGGGACAUA--UCGAGGAA", "CUGUAAAGAUAUGGUGAGCUGUAGAGCCAUCCCCAUAAUCGCAGAAUGGGACAUA--UCGAGGAA", "CUGUAAAGAUAUGGUGAGCUGUAGAGCCAUC...
rfam_14_5_mafft
URS0001A24434_12908_1-69
AGGGAACCAGCACGGCCGCAAAUCUGACUCGCUCGGCGUCGACGUCGGGCUUCGAGAUUGCGGAAGUGC
.........((((..((((((..((.....(((((((......)))))))....)).))))))..))))
[ "URS0001A24434_12908/1-69", "URS0001A23CE4_12908/1-61", "URS0001A24016_1210908/1-64", "URS0001A24276_1227460/1-61", "URS0001A23A27_1508454/1-61", "URS0001A23A27_1227464/1-61", "URS0001A2356E_1230453/1-61", "URS0001A23A93_309800/1-61", "URS0001A23A93_662480/1-61", "URS0001A24688_662478/1-61" ]
[ "AGGGAACCAGCACGGCCGCAAAUCUGACUCGCUCGGCGUCGACGUCGGGCUUCGAGAUUGCGGAAGUGC", "GUGGGAACAGUAUAGCCGCAAAUCUGACUCGCGUG--------UGGUGCGCUUGGGAUUGCGGUAGUGC", "ACGGGAACAGCACGGCCGUAACUCUGACUCGCCUG-----UGUUCGCAGGCUUGGGAUUACGGAGGUGC", "GGGAAUCCAGCACGGCCGUAAAUCUGACUCGCCCG--------AUUUGGGCUUGGGAUUGCGGUAGUGC", "GGGAAUCCAGCACGG...
rfam_14_5_mafft
URS0001A24441_348780_1-50
CCUGUCGACACAGGCUGGAAUGUGACCGGCUCCGCCGGUUGAACCACGAA
(((((....)))))..((.....(((((.......)))))...)).....
[ "URS0001A24441_348780/1-50", "URS0001A23D59_12908/1-50" ]
[ "CCUGUCGAC-ACAGGCUGGAAUGUGACCGGCUCCGCCGGUUGAACCACGAA", "CCCGUCCUCGACGGGCUGGGAUGUGACCGG-UUGACCGGUUGAACCACUAA" ]
rfam_14_5_mafft
URS0001A24446_12908_1-69
GCGGUUCCGGUUCACGUCAAGCCUCCCUUUUGCAGGCACGCUCCCAUGCGAGCGGACGACCCGGCGGCC
..(((.((((....((((....................................))))..))))..)))
[ "URS0001A24446_12908/1-69", "URS0001A23555_12908/1-68", "URS0001A243F7_12908/1-48", "URS0001A233C5_12908/1-57", "URS0001A23322_164756/1-56", "URS0001A2422F_1795/1-57", "URS0001A237F7_12908/1-57", "URS0001A237F7_1449060/1-57", "URS0001A237F7_700508/1-57" ]
[ "GCGGUUCCGGUUCACGUCAAGCCUCCCUUUUGCAGGCACGCUCCCAUGCGAGCG--------GACGACCCGGCGGCC", "GCGGUUCCGGUUCACGUCAGGCCCUCU--AUGAGGGCAGCGCUCCAGGCGGGCG-------CGACGACCCGGCGGCC", "GCGGUUCCGGUUCACGUCGAGGCUCC----------------------CCGGCC-------CGACGACCCGGCGGCC", "CCGGCUCCGGUUCCCGUC-----CCCUACCUGCG--------UCCGCGCAGACG-------GGGCG...
rfam_14_5_mafft
URS0001A24453_12908_1-79
CGGGAAUAAGCUUAGGAUUCCCGGCAGUUUGGCAGUGUUAAUAGCCUUUUCUUUGGCCGGAAUUGGCGGUUAGUGAAUC
((((((...........))))))..............(((((.(((..((((......))))..))).)))))......
[ "URS0001A24453_12908/1-79", "URS0001A2413C_999422/1-79", "URS0001A23FBC_12908/1-79", "URS0001A23FBC_1122986/1-79", "URS0001A232E6_12908/1-79", "URS0001A2431E_12908/1-79", "URS0001A23A37_12908/1-79", "URS0001A2423D_12908/1-79", "URS0001A24116_12908/1-77", "URS0001A23FDC_12908/1-78" ]
[ "CGGGAAUAAGCUUAGGAUUCCCGGCAGUUUGGCAGUGUUAAUAGCCUUUUCUUUGGCCGGAAUUGGCGGUUAGUGAAUC", "CGGGAAUAAGCUUAGAAUUCCCGGUAGUUUGGCAGUGUUAAUAGCCUUUUCUUUGGCCGGAAUUGGCGGUUAGUGAAUC", "CGGGAAUAAGCUUAGAAUUCCCGGCAGUUUGGCAGUGUUAAUAGCCUUUUCUUUGGCCGGAAUUGGCGGUUAGUGAAUC", "CGGGAAUAAGCUUAGAAUUCCCGGCAGUUUGGCAGUGUUAAUAGCCUUUUCUUUGGCCGG...
rfam_14_5_mafft
URS0001A24458_1499681_1-36
GUCCUGGUCGGAAACCAGGACGCGAUUCCAGAGGAG
((((((((.....))))))))...............
[ "URS0001A24458_1499681/1-36", "URS0001A24843_12908/1-31", "URS0001A24A62_1118060/1-35", "URS0001A23B98_1232436/1-35", "URS0001A23DE5_633147/1-32", "URS0001A23851_12908/1-33", "URS0001A23892_12908/1-34", "URS0001A238C2_12908/1-33", "URS0001A2330F_12908/1-32", "URS0001A23642_12908/1-32" ]
[ "GUCCUGGUCGGAAACCAGGACGCGAUUCCAGAGGAG", "GGCCUGGUCGGAAACCAGGCCACCUAUGGAG-----", "GCCCUGGUCGGUAACCAGGACGAGAUCGUAAGGAG-", "GUCCUGGUCGGUAACCAGGACGCGAUGGUAAGGAG-", "GGUCUGGUCGGAAACCAGACAGGCAGAAGGAG----", "GUCCUGGUCGGAAACCAGGACACGAAGAAGGAG---", "GCCCUGGUCGGAAACCAGGGCCCGAUAAAAGGAG--", "GUCCUGGUCGGAAACCAGGAC...
rfam_14_5_mafft
URS0001A2445B_1224164_1-88
ACUCAGGCACGAUCUUUGCCGUGGGUUUCCUUAUGUGGGGACCCCGUGAGGAUGCGAAGAACCGACCUGAAGUUUCAAUCCUGAGGGA
(((((((.....(((((((((.((..................)))).......))))))).....)))).)))...............
[ "URS0001A2445B_1224164/1-88", "URS0001A239DA_12908/1-55" ]
[ "ACUCAGGCACGAUCUUUGCCGUGGGUUUCCUUAUGUGGGGACCCCGUGAGGAUGCGAAGAACCGACCUGAAG-UUUCAAUCCUGAGGGA", "ACUUAGGCACGAUCCAUCAC----------------------------------UGCGGAACCGACCUGAAGUUUUCAAUCCUGAGGGA" ]
rfam_14_5_mafft
URS0001A24463_12908_1-32
CUAUACCAAAGAAUUUGGUAUGGCGAAAGGAG
((((((((.......)))))))).........
[ "URS0001A24463_12908/1-32", "URS0001A233C2_12908/1-31" ]
[ "CUAUACCAAAGAAUUUGGUAUGGCGAAAGGAG", "CUAUGUC-AUGAAUUUGGCAUGGCGAAAGGAG" ]
rfam_14_5_mafft
URS0001A24469_1158606_1-33
CUCUGGUGAAGCAAAUGAGCCAGGGCAAAGGAG
(((((((...........)))))))........
[ "URS0001A24469_1158606/1-33", "URS0001A2463B_1449342/1-33", "URS0001A23456_1158607/1-33", "URS0001A24469_12908/1-33", "URS0001A24469_888066/1-33", "URS0001A240B9_1123233/1-30", "URS0001A240B9_45670/1-30", "URS0001A23EC7_1227363/1-33", "URS0001A238DF_1260356/1-33", "URS0001A241D5_1328869/1-33" ]
[ "CUCUGGUGAAGCAAAUGAGCCAGGGCAAAGGAG", "CUCUGGUUCAGCAGAUGCAUCAGGGCAAAGGAG", "CUCUGAUUCAGCAAAUGUUUCAGGGCAAAGGAG", "CUCUGGUGAAGCAAAUGAGCCAGGGCAAAGGAG", "CUCUGGUGAAGCAAAUGAGCCAGGGCAAAGGAG", "CUCUG---UGCCAGAUGGUUCAGGGCAAAGGAG", "CUCUG---UGCCAGAUGGUUCAGGGCAAAGGAG", "CUCUGGCCCAGCAAAUGGACCAGGGCAAAGGAG", "CUC...
rfam_14_5_mafft
URS0001A24472_12908_1-47
CGGACAAACACGUCCGUAGGGAUGUGGCCGAAAGGCUGAACCAUAAA
(((((......)))))..((.....((((....))))...)).....
[ "URS0001A24472_12908/1-47", "URS0001A23F16_12908/1-46", "URS0001A23D81_12908/1-46", "URS0001A23C73_12908/1-47", "URS0001A24088_12908/1-46", "URS0001A240ED_12908/1-47", "URS0001A24047_12908/1-46" ]
[ "-CGGACAAACACGUCCGU-AGGGAUGUGGCC--GAAAGGCUGAACCAUAAA", "-CGGAC-AACAUGUCCGU-AGGGAUGUAGCC--GAAAGGCUGAACCGUAAA", "-CGGAC-AACAUGUCCGU-AGGGAUGUGGCC--GAAAGGCUGAACCGUAAA", "-CGGACAAACAUGUCCGU-AGGGAUGUGGCC--GAGAGGCUGAACCAUAAA", "GCGGAU----ACGUCCGC-AGGGAUGUGGCCCCAGAGGGCUGAACCACAAA", "GCGGAU----ACGUCCGCAAGGGAUGUGGC...
rfam_14_5_mafft
URS0001A2447F_374933_1-51
CGCGAGGCGUCAGUCCUUGAACUUGAUAGCGGCGUGGCUUUAAAUUGAGGU
((((..((..(((.........)))...))..))))...............
[ "URS0001A2447F_374933/1-51", "URS0001A24AF6_1304873/1-51", "URS0001A246C1_1304890/1-51", "URS0001A24337_1169410/1-51", "URS0001A2387D_1298924/1-51", "URS0001A2387D_1290393/1-51", "URS0001A2387D_262727/1-51" ]
[ "CGCGAGGCGUCAGUCCUUGAACUUGAUAGCGGCGUGGCUUUAAAUUGAGGU", "CACGCGGUGUCAGUCUUUGAACUCGAUAGCGGCGUGGCUUCAAAUCGAGGU", "CAUGCGGUGUCAGUCUAAGUACUUGAUAGCGGCAUGGCUUCAAAUUGAGGU", "CAUGCGGUGUCAGUCUGUGUACUCGAUAGCGGCAUGGCUUCAAAUUGAGGU", "CACGCGGUGUCAGUCCUUGAACUUGAUAGCGGCGUGGCUUCAAAUCGAGGU", "CACGCGGUGUCAGUCCUUGAACUUGAUAGC...
rfam_14_5_mafft
URS0001A24494_12908_1-86
CUGACCAGGACGCAUGGGUCGACGUUCGUGCAACGAGCCCCUCUCCUUACAACCUGACGGUAGUAAGGAGAUGCGACAAAAGUCAG
(((((...(.(((..((((...((((.....)))).)))).(((((.(((.((......)).))).))))).))).)....)))))
[ "URS0001A24494_12908/1-86", "URS0001A23397_12908/1-80", "URS0001A247E6_12908/1-80", "URS0001A23A50_12908/1-80", "URS0001A23720_12908/1-80", "URS0001A23D37_12908/1-80", "URS0001A23D35_12908/1-80", "URS0001A246B4_12908/1-76" ]
[ "CUGACCAGGACGCAUGGGUCGACGUUCGUGCAACGAGCCCCUCUCCUUACAACCUGACGGUAGUAAGGAGAUGC-GACAAAAGUCAG", "CUGACCAGGACGCAUGGGUCGACGUUCGUGCAACGAGCCCCUUCC------UCCUGCUG-AUGCAGGUGGAUGCGACCAAAAGUCAG", "CUGACCGGGACGCAUGGGUCGACGUUCGUGCAACGAGCCCCUUCU------GCCUGCUA-ACGCAGGUGGAUGCGACCAAAAGUCAG", "CUGACCAGGACGCAUGGGUCGACGUUCGUGCAACGA...
rfam_14_5_mafft
URS0001A244A1_12908_1-62
UGCCAAGAACCAUGAGGAAAUUGUCUCCCCUUAUGGAUCUGGUAAAUUAACCAAUGAAGGAG
..(((.((.((((((((...........)))))))).)))))....................
[ "URS0001A244A1_12908/1-62", "URS0001A23D9F_12908/1-62", "URS0001A2449F_12908/1-62", "URS0001A2358B_12908/1-62", "URS0001A23CCA_12908/1-62" ]
[ "UGCCAAGAACCAUGAGGAAAUUGUCUCCCCUUAUGGAUCUGGUAAAUUAACCAAUGAAGGAG", "UGCCAAGAACCAUGAGGAAAUUGUCUCCCCUUAUGGAUCUGGUAAAUUAACCAACGAAGGAG", "UGCCAAGAACCAUGAGGAAAUUGUCUCCCCUUAUGGAUCUGGCCAAUUCAGCAACGAAGGAG", "UGCCAUGAACCAUGAGGAAAUUGUCUCCCCUUGUGGAUCUGGCCAAUUCAGCAACGAAGGAG", "UGCCAUGAACCAUGAGGAAAUUGUCUCCCCUUAUGGAUCUGGC...
rfam_14_5_mafft
URS0001A244A3_12908_1-55
GAAAGGCCGUAUUCGUCUUAUACGGCUGGAUGCGACAGAAAGCAUCCCAUUCAAG
....((((((((.......))))))))((((((........))))))........
[ "URS0001A244A3_12908/1-55", "URS0001A23910_12908/1-51", "URS0001A23D7C_12908/1-53" ]
[ "GAAAGGCCGUAUUCGUCUUAUACGGCUGGAUGCGACAGAAAGCAUCCCAUUCAAG", "GAAAGGCCGUUCAUCGU-CGUGCGGCUGGAUG---CAGAAAGCAUCCCAUUUAAG", "GAAAGGCCAUAUUCGUC-UAUAUGGCUGGAUGCGUCAG-AAGCAUCCCAUUUAAG" ]
rfam_14_5_mafft
URS0001A244AC_12908_1-103
UGAUAGCUGUGAAGUGGGAGGUUGCUACUUUCAUUUUUAAUUUAAAAGAUAGAAAGUAGGUUUUCACACUGAGCGAAGGUCAUGUUACUAAAACUGGCGACAA
.............(((.((((...(((((.........................)))))..)))).))).........(((..((((.......)))))))..
[ "URS0001A244AC_12908/1-103", "URS0001A2485F_679200/1-87", "URS0001A23AE2_12908/1-86" ]
[ "UGAUAGCUGUGAAGUGGGAGGUUGCUACUUUCAUUUUUAAUUUAAAAGAUAGAAAGUAGGUUUUCACACUGAGCGAAGGUCAUGUUACUA-AAACUGGCGACAA", "UGAUAGCUGUGAAGCGUGAGGUUGCCGUUCCUGUU-----------------GGGAUGGGGUUUUCCGUGGAGCGAAAGUCAUGUUACUAUAAACUGGCGACAA", "UGAUAGCUGAGAAGCG-GAGGUUGCUGCGUACAUAUAUGACGCA---------------GGUUUUUCGUGGAGCGAAUGUCAAUUUACA--AAAC...
rfam_14_5_mafft
URS0001A244C3_12908_1-39
GAUUGCAUAUUUACCUUACCCUCUCUGUAAUCGCGGCUG
(((((((..................))))))).......
[ "URS0001A244C3_12908/1-39", "URS0001A23F4F_12908/1-38", "URS0001A24220_12908/1-39", "URS0001A2492C_12908/1-33", "URS0001A2431F_12908/1-33", "URS0001A23AD4_12908/1-34", "URS0001A24762_1158294/1-34", "URS0001A247D1_12908/1-39", "URS0001A24249_12908/1-34", "URS0001A23770_12908/1-34" ]
[ "GAUUGCAUAUUUACCUUACCCUCUCUGUAAUCGCGGCUG", "GAUUGCACAUUCACACUA-CCUCUCUGUAAUCGCGGCUG", "GAUUACACAAAGACCUUAUCCUCUCUGUAGUCGCGGCUG", "GAUUACA------CAACGACCUUUCUGUGAUCGCGGCUG", "GGUUGCA------CCAAAUCCUCUCUGCAAUCGCGGCUG", "GAUUGCAAGUAAAC-----CCUCUCUGUGAUCGCGGCUG", "GAUUGCAAGUCAAC-----CCUCUCUGUAAUCGCGGCUG", "...
rfam_14_5_mafft
URS0001A244C5_12908_1-119
AGCACUGUGUGAACGGUGUAAUCAUACGUAAGUCCGACGUGCUGGAUUGCAGAGUUUUUCUGCAGAUCCCUGAACAAUCAGGGGAAGGCACUGCCCGAAAAACCGGGCUCAGGGAUUAC
.((((((......))))))........((((..((...(((((...........................................))))).(((((......)))))....)).))))
[ "URS0001A244C5_12908/1-119", "URS0001A23C96_521011/1-117" ]
[ "AGCACUGUGUGAACGGUGUAAUCAUACGUAAGUCCGACGUGCUGGAUUGCAGAGUUUUUCUGCAGAUCCCUGAACAAUCAGGGGAAGGCACUGCCCGAAAAACCGGGCUCAGGGAUUAC", "AGCACUGUGUGAACGGUGUAAUCAUACGUAAGUCCGACGUGCCGGAUUGC--AGUUUUUCUGCAGAUUCCUGAACAAUCAGGGGAUGGCACUGCCCAGAGAUCUGGGCUCAGGGAUUAC" ]
rfam_14_5_mafft
URS0001A244C9_1210908_1-88
CCCGUGACCCGUACGGGAACGGGACGAAAUGUGGUUGCGCGGCGAGGACGACGACGUGUCGUCUUCGUUGGCGGAACUGAAUCGCAAG
(((((.............)))))..((.....((((......................................))))...)).....
[ "URS0001A244C9_1210908/1-88", "URS0001A23ADF_12908/1-65" ]
[ "CCCGUGACCCGUACGGGAACGGGACGAAAUGUGGUUGCGCGGCGAGGACGACGACGUGUCGUCUUCGUUGGCGGAACUGAAUCGCAAG", "CCCGAUAGCU---------CGGGACGAAAUGUGGUCGGCCGGGCGCAACGCGCCCCUGCCG--------------ACUGAAUCGCAAG" ]
rfam_14_5_mafft
URS0001A244D3_1433844_1-79
UGAGAAAGCGCUUAGAAUUCUCAGCAGUUCAGUGGUGUUAAUAGCGUUCUCUCUGGCCUGAUGACGCGGUUAGUGAAUC
((((((...........))))))..............(((((.(((((.((........)).))))).)))))......
[ "URS0001A244D3_1433844/1-79", "URS0001A23C29_12908/1-79", "URS0001A2393B_12908/1-79", "URS0001A2438C_12908/1-79", "URS0001A24A13_12908/1-79", "URS0001A23E52_12908/1-79", "URS0001A23E52_702438/1-79", "URS0001A23E52_1236497/1-79" ]
[ "UGAGAAAGCGCUUAGAAUUCUCAGCAGUUCAGUGGUGUUAAUAGCGUUCUCUCUGGCCUGAUGACGCGGUUAGUGAAUC", "UGAGAAAGCGCUUAGAAUUCUCAGCAGUUCAGUGGUGUUAAUAGCGUUCUCUCCGGCCAGAUGACGCGGUUAGUGAAUC", "UGAGAAAGCGCUUAGAAAUCUCAGCAGUUCAGUGGUGUUAAUAGCGUUCUCUCUGGCCAGAUGACGCGGUUAGUGAAUC", "UGAGAAAGCGCUUAGAAUUCUCAGCGGUUCAGUGGUGUUAAUAGCGUUCUCUCUGGCCAG...
rfam_14_5_mafft
URS0001A244E6_12908_1-92
GGGGACCUUCGGGGCCCUAUACCAAGGGGUGGGUUCGACCCGCCCUACAUAACCGGCAGGGAAACCUGUCGAAGCUAAACGGAAGACAGAAA
((((.(((...))))))).........((((((((...........................))))))))......................
[ "URS0001A244E6_12908/1-92", "URS0001A24371_12908/1-89" ]
[ "GGGGACCUUCGGGGCCCUAUACCAAGGGGUGGGUUCGACCCGCCCUACAUAACCGGCAGGGAAACCUGUCGAAGCUAAACGGAAGACAGAAA", "GGGGACCUUCGGGGCCCUAUACCAA-CGGUGGGCUUCACCCACCCUACAUAA--GACGGGGAGACCCGUCUAAGCUAAACGGAAGACAGAAA" ]
rfam_14_5_mafft
URS0001A244EC_1123024_1-59
CCGGUUCCGGUUCACCCUCGGUGCCGCGCUCGUCGAGCCGCACCAGGGACCCGGCGACC
..(((.((((....((((.(((...................)))))))..))))..)))
[ "URS0001A244EC_1123024/1-59", "URS0001A24855_12908/1-50", "URS0001A24035_12908/1-45", "URS0001A233C0_12908/1-49", "URS0001A241EC_12908/1-45", "URS0001A23950_12908/1-42", "URS0001A2418F_12908/1-52", "URS0001A23AFE_12908/1-49", "URS0001A244D9_1305843/1-56", "URS0001A2351D_468556/1-42" ]
[ "CCGGUUCCGGUUCACCCUCGGUGCCGCGCUCGUCGAGCCGCACCAGGGACCCGGCGACC", "UUGGUUCCGGUUCACCUC---------AGCCGCACCGCGCGUCUGGGGACCCGGCGACU", "CUGGUUCCGGUUCACC--------------CGGCUCGCGAGAGCAGGGACCCGGCGACC", "GCGGUUCCGGUUCACG----------AGCCCGCAGCCCGCGGCGCACGACCCGGCGACC", "CCGGUUCCGGUUCACG--------------UCGCGUGAGAGCGUGACGACCCGGC...
rfam_14_5_mafft
URS0001A24501_1227493_1-100
CUGAUCAACGCGUGCGGGUCAAUUGCGGCUUGCAACACCCGAUCUCCCUCAACGUACCGCCGAAAAUGGCGGUCUCCGAGGGAGAGCGCGUGACUAUCAG
(((((...(((((..((((...(((((...))))).))))..(((((((...(........................))))))))))))).....)))))
[ "URS0001A24501_1227493/1-100", "URS0001A24B1E_12908/1-100", "URS0001A249DB_12908/1-100", "URS0001A2320C_1455608/1-100", "URS0001A239E4_12908/1-100", "URS0001A231BB_12908/1-100", "URS0001A24445_12908/1-100", "URS0001A2354C_1227498/1-100", "URS0001A24125_1227497/1-100", "URS0001A246B8_1227492/1-100"...
[ "CUGAUCAACGCGUGCGGGUCAAUUGCGGCUUG-CAACACCCGAUCUCCCUCAACGUACCGCCGAAAAUGGCGGUCUCCGAGGGAGAGCGCGUGACUAUCAG", "CUGAUCGGCGCGUCCGGGUCAAUUGCGGCUUG-CAACACCCGAUCUCGCUCAACGUGCCUCCACGAAUGGAGGUUACGGAGGGAGAGCGCGUGACAGUCAG", "CUGAUCGGCGCGUCCGGGUCAAUUGCGGCGUG-CAACACCCGAUCUCCCUCAACUGUCCGUCGGAAAUGACGGUCACCGAGGGGGAGCGCGUGACGAUCAG...
rfam_14_5_mafft
URS0001A2450D_12908_1-69
UAUCUUUGCACCCGCUAUUCCUAUGAGUGGAAUUGCUACAUAAUAAUUAUUUAACUAAAUAUUAGCAUG
.............((.(((...........))).)).................................
[ "URS0001A2450D_12908/1-69", "URS0001A24123_12908/1-69", "URS0001A234EC_12908/1-69", "URS0001A239FC_12908/1-69", "URS0001A23692_1094466/1-65", "URS0001A23EEB_12908/1-56", "URS0001A23F12_12908/1-56", "URS0001A240AE_1107311/1-65" ]
[ "UAUCUUUGCACCCGCUAUUCCUAUGAGUGGAAUUGCUACAUAAUAAUUAUUUAACUAAAUAUUAGCAUG", "UAUCUUUGCACCCGCUAUUCCUAUGAGUGGAAUUGCUACAUAAUAAUUAUUUAACUAAAUAUUGGCAUG", "UAUCUUUGCACCCGCUGUUCCUACGAGUGGAAUUGCUACAUAAUAAUUAUUUAACUAAAUAUUGGCAUG", "UAUCUUUGCACCCGCUAUUCCUACGAGUGGAAUUGCUACAUAAUAAUUAUUUAACUAAAUAUUGGCAUG", "UACCUUUGCACCCG-...
rfam_14_5_mafft
URS0001A24518_12908_1-77
GGGGGUAAAUCCUUAGAGCCCCCAGCGUGGCCGUGUUAAUAGUGGUGUCUUUGGCCGGGCAUCAUGGUUAGUGAAUC
((((((...........))))))............(((((.(((((((((......))))))))).)))))......
[ "URS0001A24518_12908/1-77", "URS0001A242E6_12908/1-75", "URS0001A23FAF_12908/1-74", "URS0001A24374_246198/1-76", "URS0001A241AC_12908/1-76", "URS0001A241AC_1236508/1-76", "URS0001A236CA_12908/1-76", "URS0001A23CBE_12908/1-76", "URS0001A23CCD_12908/1-75", "URS0001A243B9_12908/1-75" ]
[ "GGGGGUAAAUCCUUAGAGCCCCCAGCGUG-GCCGUGUUAAUAGUGGUGUCUUUGGCCGGGCAUCAUGGUUAGUGAAUC", "-UGGGGGAAGUCUUAGAACCCCAUGGAUG--CCGUGUUAAUAGCGAUGCCUUUGGCCGGGCAUGGCGGUUAGUGAAUC", "---GGGGUGAACUUAGAGCCCCGUGGAUG-UGCGUGUUAAUAGCCGUGCCUUUGGCCGGACAUGGUGGUUAGUGAAUC", "--GAGGGUGAGCUUAGAUCCCUCAGCACGUUGUGUGUUAAUAGUGUUGCUUUUGGCCGAGCAG...
rfam_14_5_mafft
URS0001A2451A_12908_1-58
CGGCGGCUCGCCUGAGCCGCCGGCCCACCUACCCGAGUACCUGACACGGCCCGGGAGA
(((((((((....)))))))))......((.((((.((..........)).)))))).
[ "URS0001A2451A_12908/1-58", "URS0001A2478A_12908/1-51" ]
[ "CGGCGGCUCGCCUGAGCCGCCGGCCCACCUACCCGAGUACCUGACACGGCCCGGGAGA", "-------CGGCCGGCGUCCGCCGGUCGUCUACCCGGGUACCUGACACGGCCCGAGAGA" ]
rfam_14_5_mafft
URS0001A2451B_12908_1-37
AUUAAUAACCGAGGGUCGGGCACCCUACAAAAUUAAU
((((((.....(((((.....))))).....))))))
[ "URS0001A2451B_12908/1-37", "URS0001A23426_12908/1-35", "URS0001A23FD1_12908/1-35", "URS0001A24113_12908/1-36", "URS0001A23FE0_12908/1-31", "URS0001A236B3_12908/1-36", "URS0001A241E9_1197874/1-37", "URS0001A2331F_12908/1-36", "URS0001A23C5A_867900/1-36", "URS0001A249A4_28188/1-36" ]
[ "AUUAAUAACCGAGGGUCGGGCACCCUACAAAAUUAAU", "AUUAUUAA-CCGAGGUCGGGCACCUCAAAAAAUAAA-", "AUUAAUAA-CCGGGGUCGUGUACCCCAAAAUUUAAU-", "AUUAAUAA-CCAGGGUCGGGAACCCUUAAUAUUUAAU", "AUUAAUAA-CAAGGGUCGGGCACCCUAUAAAU-----", "AUUAAUAA-CGAGGGUCGGGCACCCUGCAAAAUUAAU", "AUUAAUAACCGAGGGUCGGGCACCCUACAUAAUUAAU", "AUUAAUAACCAAGG...
rfam_14_5_mafft
URS0001A24532_12908_1-103
UGAUAGCGUUGAAGCGUGAGGUUGCCACAUUAUCCAGUGAUGUGGGUUUUCCGUGGAGCGAAUGUCAGUAGGCUGCAUAGCGGCCACAAAAUCAUGACGACAA
.............(((.((((...(((((...........)))))..)))))))........((((.....((((.....))))..............)))).
[ "URS0001A24532_12908/1-103", "URS0001A24532_1280697/1-103", "URS0001A24532_1280700/1-103", "URS0001A24161_12908/1-86" ]
[ "UGAUAGCGUUGAAGCGUGAGGUUGCCACAUUAUCCAGUGAUGUGGGUUUUCCGUGGAGCGAAUGUCAGUAGGCUGCAUAGCGGCCACAAAAUCAUGACGACAA", "UGAUAGCGUUGAAGCGUGAGGUUGCCACAUUAUCCAGUGAUGUGGGUUUUCCGUGGAGCGAAUGUCAGUAGGCUGCAUAGCGGCCACAAAAUCAUGACGACAA", "UGAUAGCGUUGAAGCGUGAGGUUGCCACAUUAUCCAGUGAUGUGGGUUUUCCGUGGAGCGAAUGUCAGUAGGCUGCAUAGCGGCCACAAAAUCAUGA...
rfam_14_5_mafft
URS0001A24537_12908_1-34
CGGUUAUCGAAGGAGAAAGCCUUAAUUCAUAACG
(.(((((.(((((......))))....)))))))
[ "URS0001A24537_12908/1-34", "URS0001A239F8_12908/1-34", "URS0001A24257_12908/1-34", "URS0001A235F2_12908/1-32", "URS0001A23413_12908/1-32", "URS0001A23413_1125720/1-32", "URS0001A24AF4_12908/1-32", "URS0001A246EA_12908/1-33", "URS0001A23E48_12908/1-33", "URS0001A23601_313596/1-33" ]
[ "CGGUUAUCGAAGGAG-AAAGCCUUAAUUCAUAACG-", "-UGUUAUCGGAGGAGUUAGACCUUAAUUCAUAACA-", "-UGUUAUCGAAGGAGUUAGACCUUAAUUCAUAACA-", "-AGUUAUCGAAGGA--UAAGCCUUAAUUCAUAGCU-", "-UGUUAUCGAAGGA---AUGCCUUAAUUCAUAACUA", "-UGUUAUCGAAGGA---AUGCCUUAAUUCAUAACUA", "-UGUUAUCGAAGGA---AUGCCUUAAUUCAUAACUG", "-GAAUAUCGAAGGAG-GAAGC...
rfam_14_5_mafft
URS0001A24538_12908_1-62
CUGUAAAGAUAUGGUGGCUGUAGAGUCAUCCCCAUAAUCUGGAAAUGGGCCAUAUCGAGGAA
.......((((((((((((....)))))).(((((.........))))).))))))......
[ "URS0001A24538_12908/1-62", "URS0001A23C78_1319815/1-55", "URS0001A23C78_1340502/1-55", "URS0001A240B7_12908/1-59", "URS0001A233F9_12908/1-59", "URS0001A234E0_12908/1-62" ]
[ "CUGUAAAGAUAUG--GUG-GCUGUAGAGUCAUCCCCAUAAUCUGGAAAUGGGCCAUAUCGAGGAA", "CUGUAAAGGUAUG--UUAGGCUGUAGAGCU--------AGUACUCGAAAGAGGCAUACCGAAGAA", "CUGUAAAGGUAUG--UUAGGCUGUAGAGCU--------AGUACUCGAAAGAGGCAUACCGAAGAA", "CUGUAAAGAUAUGUAGAGAGCUGUAGAGCCUU------AAUCCCAAAUGGGGUCAUAUCGAGGAA", "CUGUAAAGAUAUGUAGAGAGCUGUAGAGCCG...
rfam_14_5_mafft
URS0001A24539_12908_1-79
CGAAGAUAACGCUUAGAUUCUUCGCAGCUCUUUCGUGUUAAUAGUGGUAUUCAUGGCCGGAUAUCAUGGUUAGUGAAUC
((((((............)))))).............(((((.(((((((((......))))))))).)))))......
[ "URS0001A24539_12908/1-79", "URS0001A2450C_12908/1-78", "URS0001A23F4B_12908/1-78", "URS0001A236FB_12908/1-78", "URS0001A2428D_12908/1-78", "URS0001A24228_12908/1-78", "URS0001A24692_12908/1-78", "URS0001A23B3E_12908/1-78", "URS0001A24017_12908/1-78", "URS0001A23733_12908/1-78" ]
[ "CGAAGAUAACGCUUAGAUUCUUCGCAGCUCUUUCGUGUUAAUAGUGGUAUUCAUGGCCGGAUAUCAUGGUUAGUGAAUC", "-GAAGAUAAUACUUAGAAUCUUCAUAGCUUCUUCGUGUUAAUAGUGAUAUUCAUGGCCGAAUAUCAUGGUUAGUGAAUC", "-GAAGAUAAUACUUAGAAUCUUCAUAGCUUCUUCGUGUUAAUAGUGAUAUUCAUGGCCGAAUAUUAUGGUUAGUGAAUC", "-GAAGAUAACACUUAGAAUCUUCACAGCUUCUUCGUGUUAAUAGUGAUAUUCAUGGCCGA...
rfam_14_5_mafft
URS0001A24548_12908_1-64
AGCCAUGAACCGUGAGGAAAAUGUCUCCCCUUGCGGAUCGGCGAUAAAAAAAAUGACAAAGGAG
...(..((.((((((((...........)))))))).)).).......................
[ "URS0001A24548_12908/1-64", "URS0001A2330A_12908/1-57", "URS0001A23B79_12908/1-57", "URS0001A23395_12908/1-60" ]
[ "AGCCAUGAACCGUGAGGAAAAUGUCUCCCCUUGCGGAUCGGCGAUAAAAAAAAUGACAAAGGAG", "CCCCCUGAACCGUGAGA-AAACG--GCCUCUUGCGGAUCGG----GUAAUUUAAAAUAAAGGAG", "GACCCAGAACCGCGAGG-AAACG--GCCUCUUGCGGAUCGG----GAAAUUUAAAAUAAAGGAG", "CGCCAAGAACCGUGAGG-AAAUGUCUCCCCUUGCGGAUCUG---GUAAUUUCAUGACAAAGGAG" ]
rfam_14_5_mafft
URS0001A2454F_1336240_1-53
CAUGUGGUGCCUGACUUCGGGUUGGGAGUGCGACGUGGCCUUAAACUUGAGGU
(((((.((.((((((.....))))))...)).)))))................
[ "URS0001A2454F_1336240/1-53", "URS0001A23618_1515746/1-53", "URS0001A23A8C_1579504/1-52", "URS0001A23463_314608/1-53", "URS0001A23463_637905/1-53", "URS0001A24409_1236542/1-53", "URS0001A24409_225849/1-53", "URS0001A239D0_1565129/1-53", "URS0001A239D0_1521167/1-53", "URS0001A239D0_323850/1-53" ]
[ "CAUGUGGUGCCUGACUUCGGGUUGGGAGUGCGACGUGGCCUUAAACUUGAGGU", "CAUGUGGUGCUCAACUUCGGGUUGGGAGAGCGACAUGGCCUUAAACUUGAGGU", "CAUGUGGUGUCCGACUUCGGGUUGGAAGAGCGACAUGGCCUU-AACUUGAGGU", "CAUGUGGUGUCCGACUUCGGGUUGGGAGAGCGACAUGGCCUUCAACUUGAGGU", "CAUGUGGUGUCCGACUUCGGGUUGGGAGAGCGACAUGGCCUUCAACUUGAGGU", "CAUGUGGUGUCCGACUUCGG...
rfam_14_5_mafft
URS0001A24555_12908_1-34
CUCUGGAUUCGAAGGCAAUCCAGGGCGGAAAGAG
((((((((.........)))))))).........
[ "URS0001A24555_12908/1-34", "URS0001A23BF8_12908/1-34", "URS0001A23AE1_12908/1-34", "URS0001A2359C_12908/1-34", "URS0001A24769_717606/1-34", "URS0001A245AD_1430331/1-32", "URS0001A245AD_1382357/1-32" ]
[ "CUCUGGAUUCGAAGGCAAUCCAGGGCGGAAAGAG", "CUCUGGAUUCGCAGGGAAUCCAGGGCGGAAAGAG", "CUCUGGAUUCGCGGGGAAUCCAGGGCGGAAAGAG", "CUCUGGAUUCGCGUGGAAUCCAGGGCGGAAAGAG", "CUCUGGAUUCGCAUGUAAUCCAGGGCGGAAAGAG", "--CUCUGUUUCGACGAGAUCCAGGGCGGAAGGAG", "--CUCUGUUUCGACGAGAUCCAGGGCGGAAGGAG" ]
rfam_14_5_mafft
URS0001A2457C_12908_1-65
GGGGUCCUUUGGGCCCUAUAAUAUGCAAGACCCAACUGUUUUGCACAUAAAACGGAAGACAGAAA
((((.((....))))))......((((((((......))))))))....................
[ "URS0001A2457C_12908/1-65", "URS0001A24029_12908/1-65" ]
[ "-GGGGUCCUUUGGGCCCUAUAAUAUGCAAGACCCAACUGUUUUGCACAUAAAACGGAAGACAGAAA", "GGGGACCUUUGGGGCCCUAUAAUAUGCAAGACUU-UUUGUCUUGCACGUACAACGGAAGACAGAAA" ]
rfam_14_5_mafft
URS0001A24585_1230460_1-77
CCUGCGCAGCACGUCUCUGUGCUACAGGUCGGGAUGUGAUCCGCGGGGCAUGGCCCCGGUCGGGAUUGAACCAGAAA
((((....................))))..((.....(((((....................)))))...)).....
[ "URS0001A24585_1230460/1-77", "URS0001A23532_12908/1-58", "URS0001A24A4C_1227499/1-62", "URS0001A23312_12908/1-58", "URS0001A23BFF_12908/1-58", "URS0001A246F3_1227498/1-70", "URS0001A235A1_1227497/1-70", "URS0001A2424A_694430/1-70", "URS0001A23A7D_12908/1-60", "URS0001A23AD8_268739/1-50" ]
[ "CCUGCGCAGCACGUCUCUGUGCUACAGGUCGGGAUGUGAUCCGCGGGGCAUGGCCCCGGUCGGGAUUGAACCAGAAA", "CCUGUCCGGCAUCUGC-----CCACAGGUCGGGAUGUGAUCU--------------CACUCGAGAUUGAACCAGGAA", "CCUGUUCGGCACACGC-C---CCACAGGUCGGGAUGUGAUCCCGGAGGUCG-----------GGAUUGAACCAGGAA", "CCCGCACGGCACGCGC------CACGGGUCGGGAUGUGAUCCGGAGG-------------CCGGAU...
rfam_14_5_mafft
URS0001A2458D_12908_1-103
AGGCACCUACGGGGGCCUAUACCACCUGCCACCUUCGGGGGGCUUACAUCGCGGGGGAUGGCCAUCGGGCCGAACUCGCACUGCUAGAAACGGAAGACAGUAA
((((.(((...))))))).......(.(.(...............................................)..).)....................
[ "URS0001A2458D_12908/1-103", "URS0001A24466_266809/1-66", "URS0001A24466_12908/1-66", "URS0001A24727_1290553/1-76", "URS0001A23B23_12908/1-66", "URS0001A23D6D_12908/1-69", "URS0001A23AFB_388399/1-64", "URS0001A24AAD_12908/1-65", "URS0001A249DD_12908/1-67", "URS0001A24332_12908/1-65" ]
[ "AGGCACCUACGGGGGCCUAUACCACCUGCCACCUUCGGGGGGCU--UACAUCGCGGGGGAUGGCCAUCGGGCCGAACUCGCACUGCUAGAAACGGAAGACAGUAA", "--------------------------GGCCACCUCCGGGGGGCU-UUACAUAGCGGGAGCGCA----------GGCUCUCGCCCAGA--CAACGGAAGACAGUAA", "--------------------------GGCCACCUCCGGGGGGCU-UUACAUAGCGGGAGCGCA----------GGCUCUCGCCCAGA--CAAC...
rfam_14_5_mafft
URS0001A24590_752555_1-78
GAAGAUGCAUCUUAGAGUCUUCACAGCUUUCUUGUGUUAAUCGUGUUAUCUUUGGCCGGGUAUCACUGUUAGUGAAUC
((((((..........))))))..............(((((.(((.(((((......))))).))).)))))......
[ "URS0001A24590_752555/1-78", "URS0001A24590_12908/1-78" ]
[ "GAAGAUGCAUCUUAGAGUCUUCACAGCUUUCUUGUGUUAAUCGUGUUAUCUUUGGCCGGGUAUCACUGUUAGUGAAUC", "GAAGAUGCAUCUUAGAGUCUUCACAGCUUUCUUGUGUUAAUCGUGUUAUCUUUGGCCGGGUAUCACUGUUAGUGAAUC" ]
rfam_14_5_mafft
URS0001A2459E_12908_1-69
UAUUUUUGCACUCGAAUUAUGAUAGACAUGAUUCAUACUAUAAAAAUCAUUUACAAAAAUAUUAGCAUG
.............((((((.........))))))...................................
[ "URS0001A2459E_12908/1-69", "URS0001A245EB_12908/1-68", "URS0001A23AE0_12908/1-68", "URS0001A24845_12908/1-68", "URS0001A2321D_12908/1-68", "URS0001A2490F_12908/1-68", "URS0001A23C9E_12908/1-68", "URS0001A2332F_12908/1-67", "URS0001A23B46_12908/1-68", "URS0001A24836_12908/1-68" ]
[ "UAUUUUUGCACUCGAAUUAUGAUAGACAUGAUUCAUACUAUAAAAAUCAUUUACAAAAAUAUUAGCAUG", "UAUUUUUGCAUCCGAAUUAUGAUAAACAUAAUUCAUAC-AUAAAAAUCAUUUACAAAAAUAUUAGCAUG", "UAUUUUUGCACCCGAAUUAUGAUACACAUAAUUCAUAC-AUAAAAAUCAUUUACAAAAAUAUUAGCAUG", "UAUUUUUGCACCCGAAUUAUGAUAGACAUAAUUCAUAC-AUAAAAAUCAUUUACAAAAAUAUUAGCAUG", "UAUUUUUGCACUCGA...
rfam_14_5_mafft
URS0001A245A6_12908_1-35
CUUUAAAUCCGCAUGUGAUUUAAGGCGGAAGGGAG
((((((((.........))))))))..........
[ "URS0001A245A6_12908/1-35", "URS0001A2361D_12908/1-34", "URS0001A2401B_12908/1-32" ]
[ "CUUUAAAUCCGCAUGUGAUUUAAGGCGGAAGGGAG", "CUUUAAACCAGCUCAUGGUUUAAGGCGGAAGGAG-", "CUUUGAAU--GAAGGUCAUUCAAGGCGGAAGGAG-" ]
rfam_14_5_mafft
URS0001A245AB_58123_1-73
CCGGACGGCCGGGGGCGCGUUCCCCGGCCGUUCCGGAACCAGCUGACACCGGUACCUGGUACGGCCGGUGCAG
((((((((...................))).)))))......(((.(((((((..........))))))))))
[ "URS0001A245AB_58123/1-73", "URS0001A24715_1394178/1-55", "URS0001A241BF_12908/1-56", "URS0001A249EC_500153/1-59", "URS0001A23E28_68042/1-50", "URS0001A24B2F_1463857/1-56", "URS0001A249EB_1206101/1-58", "URS0001A249EB_1169158/1-58", "URS0001A249EB_1169155/1-58", "URS0001A24130_67263/1-57" ]
[ "CCGGACGGCCGGGGGCGCGUUCCCCGGCCGUUCCGGAACCAGCUGACACCGGUACCUGGUACGGCCGGUGCAG", "------------------GUUCCCCGGCCGUCCUGGAACCAGCUGACACCGGUACCUGAUACGGCCGGUGCAG", "-------GGUCGGGGCGGCUGCCCCGGCUUCC---------ACUAGCUCCGGUACCUGGUACGGCCGGGGAG-", "-----CCGCCGGGGGUCUCCCCGGCGGCACCGC--------ACUGA-GCCGGUACCUGGUACGGCCGGCUCAG", ...
rfam_14_5_mafft
URS0001A245AC_1227454_1-76
CCUGUUCGGCAACCGACGCCGCCACAGGCCGGGAUGUGAUCCGCGGGGCCCCGCCCCGUUGGGAUUGAACCAGGAA
(((((..................)))))..((.....(((((...................)))))...)).....
[ "URS0001A245AC_1227454/1-76", "URS0001A23405_1227491/1-74", "URS0001A2341B_1230458/1-74", "URS0001A249FB_29540/1-74", "URS0001A232D8_12908/1-71", "URS0001A2370B_358396/1-62", "URS0001A231DA_12908/1-62", "URS0001A24230_1227492/1-64", "URS0001A235BD_1227493/1-64", "URS0001A242A4_797304/1-70" ]
[ "CCUGUUCGGCAACCGACGCCGCCACAGGCCGGGAUGUGAUCCGCGGGGCC-CCGCCCCGUUGGGAUUGAACCAGGAA", "CCUGUCCGGC--ACGACGCCGCCACAGGACGGAAUGUGAUCCGCGAGGCA-GCGCCCUCGCCGGGUUGAACCAUCAC", "CCUGUCCGGC--ACGACGCCGCCACAGGACGGAAUGUGAUCCGCGGGGGA-UCGUCCUCGCCGGGUUGAACCAUCAC", "CCUGUCCGGC--ACGACGCCGCCACAGGACGGAAUGUGAUCCGCGGGGAA-UCGUCCUCGCCGGGU...
rfam_14_5_mafft
URS0001A245B4_33876_1-49
GCGGUUCCGGUUCCCGCCUCGACGAGCCCGUCGAGACGACCCGGCGACC
..(((.((((....((.(((((........))))).))..))))..)))
[ "URS0001A245B4_33876/1-49", "URS0001A24A5E_1288083/1-46", "URS0001A2357D_12908/1-42", "URS0001A242A7_1087469/1-41", "URS0001A242A7_1091046/1-41", "URS0001A242A7_36809/1-41", "URS0001A242A7_1001714/1-41", "URS0001A2488C_1463821/1-41", "URS0001A23999_12908/1-41", "URS0001A2398E_12908/1-41" ]
[ "GCGGUUCCGGUUCCCGCCUCGACGAGCCCGUCGAGACGACCCGGCGACC", "UCGGUCCCGGUUCACGUCGCACCAG--CAGGUGGGACGACCCGGCACC-", "CAGGUCCCGGUUCACGUCAUCGCCG-------AUGACGACCCGGCGACC", "AGGGUUCCGGUUCACGCCGUGACG--------CAGGCGACCCGGCGACC", "AGGGUUCCGGUUCACGCCGUGACG--------CAGGCGACCCGGCGACC", "AGGGUUCCGGUUCACGCCGUGACG--------CAGGCGAC...
rfam_14_5_mafft
URS0001A245B7_12908_1-45
GCGGACAAGGUCCGCUAGGAUGUAACCGUAAGGUUGAACUAUAAA
(((((.....)))))..((....((((....))))...)).....
[ "URS0001A245B7_12908/1-45", "URS0001A23DE8_12908/1-45" ]
[ "GCGGACAAGGUCCGCUAGGAUGUAACCGUAAGGUUGAACUAUAAA", "GCGGACAAGGUCCGCUGGGAUGUAACCGUAAGGUUGAACCAUAAA" ]
rfam_14_5_mafft
URS0001A245BB_679901_1-55
CGGGAUAUAUUCCCGUAGGGAUGUGAUUCGUUAAACCGAUGAAUUGAACCAUGAA
(((((.....)))))..((.....(((((...........)))))...)).....
[ "URS0001A245BB_679901/1-55", "URS0001A240B6_12908/1-53" ]
[ "CGGGAUAUAUUCCCGUAGGGAUGUGAUUCGUUAAACCGAUGAAUUGAACCAUGAA", "CGGGAUAAAAUCCCGUUGGAAUGUGAUCUUUAAAG--AAAAGAUUGAACCAUGAA" ]
rfam_14_5_mafft
URS0001A245C4_12908_1-95
GGGGACCUAUGGGGCCCUAUAACAUGAGGUGGGUUUCACCCACCCUACACAUAGGCGAAUUCAAGGAUUCGCCACUGCUAAACGGAAGACAGAAA
((((.(((...))))))).........((((((((..............................))))))))......................
[ "URS0001A245C4_12908/1-95", "URS0001A23524_12908/1-89", "URS0001A234ED_12908/1-94" ]
[ "GGGGACCUAUGGGGCCCUAUAACAUGAGGUGGGUUUCACCCACCCUACACAUA-GGCGAAUUCAAGGAUUCGCCACUGCUAAACGGAAGACAGAAA", "GGGGACCUUCGGGGCCCUAUACCA-ACGGUGGGUUUCACCCACCCUACAUA------AGACGGGGAGACCCGUCUAAGCUAAACGGAAGACAGAAA", "GGGGACCUAAGGGGCCCUAUAACA--CGGUGGGUUUUACCCCACCGAUACACAUAGCGGAACCUUUGGUUCUGCACUGCUAAACGGAAGACAGAAA" ]
rfam_14_5_mafft
URS0001A245C5_12908_1-62
CCUGUCACAGGACAGGACGGGAUGUGAACCCCGAGACCGACUCGCACGGUUUGAACCACUCG
(((((......)))))..((.....(((((.................)))))...)).....
[ "URS0001A245C5_12908/1-62", "URS0001A24799_12908/1-51" ]
[ "CCUGUCACAGGACAGGACGGGAUGUGAACCCCGAGACCGACUCGCACGGUUUGAACCACUCG", "CCUGUACU--CACAGGACGGGAUGUGAACCUGAA---------UCCAGGUUUGAACCACUCA" ]
rfam_14_5_mafft
URS0001A245C6_1071085_1-77
CCCGCCGCCCGGCCGACGCCGGUCGGGGACGGGACGAGAUGUGGUUCCGCGGCGUCGUCGCGGGACUGAAUCGCAAG
((((.........................))))..((.....(((((...............)))))...)).....
[ "URS0001A245C6_1071085/1-77", "URS0001A249C5_1261545/1-64", "URS0001A234E6_12908/1-48" ]
[ "CCCGCCGCCCGGCCGACGCCGGUCGGGGACGGGACGAGAUGUGGUUCCGCGGCGUCGUCGCGGGACUGAAUCGCAAG", "CCCGCCGCGACGAUCCCGUC-----GUGACGGGACGACAUGUGGUGC----GCGUCG----CGCACUGAAUCGCAAG", "-------CCCGGUUCGC------------CGGGACGAGAUGUG----------GUCGACGUUCGACUGAAUCGCAAG" ]
rfam_14_5_mafft
URS0001A245D2_2715674_1-63
ACUCAGGCACGAUUCUCUCACUCUUAGCUGGGGGAAAGCGACCUGAAGUUCAAUCCUGAGGGA
(((((((.....(((((((..........))))))).....)))).)))..............
[ "URS0001A245D2_2715674/1-63", "URS0001A23DCD_1724/1-63", "URS0001A239C2_2715677/1-63", "URS0001A245D2_553204/1-63", "URS0001A245D2_43771/1-63", "URS0001A238D4_38305/1-63", "URS0001A24236_35755/1-61", "URS0001A23F73_571915/1-54", "URS0001A24808_12908/1-54" ]
[ "ACUCAGGCACGAUUCUCUCACUCUUAGCUGGGGGAAAGCGACCUGAAGU-UCAAUCCUGAGGGA", "ACUCAGGCACGAUUCACGCGGUG-UAACCGCGUGGAAGCGACCUGAAGUAUCAAACCUGAGGGA", "ACUCAGGCACGAUUCUCCCGCUGUUAGCUGGGUGAAAGCGACCUGAAGU-UCAAUCCUGAGGGA", "ACUCAGGCACGAUUCUCUCACUCUUAGCUGGGGGAAAGCGACCUGAAGU-UCAAUCCUGAGGGA", "ACUCAGGCACGAUUCUCUCACUCUUAGCUGGGGGA...
rfam_14_5_mafft
URS0001A245D6_12908_1-51
CGCAUGGUGUUCGUGGAAAGCACGGAUGGCGAUGCGGCCCAUAUAUGAGGU
(((((.((..(((((.....)))))...)).)))))...............
[ "URS0001A245D6_12908/1-51", "URS0001A23F6B_12908/1-49", "URS0001A23B36_12908/1-50", "URS0001A23ED1_12908/1-51", "URS0001A249AE_1036674/1-51", "URS0001A244FE_12908/1-51" ]
[ "CGCAUGGUGUUCGUGGAAAGCACGGAUGGCGAUGCGGCCCAUAUAUGAGGU", "CGUAUGGUGUGCGGAGAGAGUCCGUAUAGCGAUGCGGCCC--AAUUGAGGU", "CGCAUGGUGUUCGUGGAAAGCACGGAUGGCGAUGCGGCCUG-AUAUGAGGU", "CGCAUGGUGUUCGUGGAGAGCACGGAUGGCGAUGCGGCCUUCAACUGAGGU", "CGCGUGGUGUUCGUGGAAAGCACGGAUGGCGAUGCGGCCUUCAACUGAGGU", "CGUAUGGUGUUCGUGGAAAGCACGGAUGGC...
rfam_14_5_mafft
URS0001A245DE_12908_1-67
GAAAGGUCACGGGAAAUUGUGGCUGGACGCAGUGAAGAAGGAUGAAGAUCCCGGCGUCCCAAUUUGA
....((((((........))))))((((((.(...................).))))))........
[ "URS0001A245DE_12908/1-67", "URS0001A23BAA_658656/1-67", "URS0001A23A23_12908/1-67", "URS0001A23A23_658088/1-67", "URS0001A247B3_12908/1-67" ]
[ "GAAAGGUCACGGGAAAUUGUGGCUGGACGCAGUGAAGAAGGAUGAAGAUCCCGGCGUCCCAAUUUGA", "GAAAGGUCACGGGAAACUGUGGCUGGACGCAGUGAAGAAGGAUGAAGAUCCCGGCGUCCCAAUUUGA", "GAAAGGUUACAGGAAACUGUGGCUGGACGCAGCGAAGAAGGAUGAAGAUCCCGGCGUCCCAAUUUGA", "GAAAGGUUACAGGAAACUGUGGCUGGACGCAGCGAAGAAGGAUGAAGAUCCCGGCGUCCCAAUUUGA", "GAAAGGUCACAGGAAACUGUGGC...
rfam_14_5_mafft
URS0001A245E9_252305_1-79
GGCCACCUUCGGGGGGCUUAUCACAUAGGUCUUCGCGCCCGGAGGGGCAGGGGAUCGCUAGCUAAACGGAAGACAGAAA
((((.(((...))))))).........(((((....(((......)))...))))).......................
[ "URS0001A245E9_252305/1-79", "URS0001A236D1_1579316/1-75", "URS0001A23CF1_12908/1-74", "URS0001A2362F_12908/1-76", "URS0001A241E7_12908/1-67", "URS0001A24419_12908/1-67", "URS0001A23C8F_467661/1-66" ]
[ "GGCCACCUUCGGGGGGCUUAUCACAUAGGUCUUCGCGCCCGGAGGGGCAGGGGAUCGC----UAGCUAAACGGAAGACAGAAA", "GGCCACCUUCGGGGGGCUCACACCGCGGA---UCACGCCAGUAG--GGCAGGGUUCGCU---UAGCUAAACGGAAGACAGAAA", "GGCCACCUUCGGGGGGCUAUCAACAUAGG--AGAGCGCC-------GCAAGGGCCUCUUCGUUUGCUAAACGGAAGACAGAAA", "GGCCACCUUCGGGGGGC-UUACACAUAGG----CGGGCCCCUGGCAAC...
rfam_14_5_mafft
URS0001A2460B_1365007_1-66
CGUGUGGUACUUUGUUGAAUGAAAUAAUUCAUUCAAGCUGAGCAGCGACACGGCCUAAAUAGAGGU
(((((.((..((.(((..................).)).))...)).)))))..............
[ "URS0001A2460B_1365007/1-66", "URS0001A24AEE_1278302/1-64", "URS0001A24943_12908/1-65", "URS0001A24AAB_12908/1-65", "URS0001A24639_12908/1-65", "URS0001A23741_12908/1-65", "URS0001A24776_357804/1-65", "URS0001A233AD_12908/1-65", "URS0001A249F8_12908/1-65", "URS0001A248B0_1123036/1-65" ]
[ "CGUGUGGUACUUUGUUGAAUGAAAUAAUUCAUUCAAGCUGAGCAGCGACACGGCCUAAAUAGAGGU", "CGUGUGGUACUCUGUUGAUUGAAAUAAUUCA-UCAAGCUGAGCAGCGACACGGACCAAU-AGAGGU", "CGUGUGGUACUUUGUUGAGUGAAAUGAUUCUCUCAAACAAAGCAGCGAUGCGGCCCAAU-AGAGGU", "CGUAUGGUACUUUGUUGGAUGAAAUGAUUCAUUCAUGCAGAGCAGCGAUGCGGCCCAAU-AGAGGU", "CGUAUGGUACUUUGUUGAAUGAAAUGA...
rfam_14_5_mafft
URS0001A2460E_1675527_1-78
GGGGACCUUCGGGGCCCUUUAACAUAGGCGGGUCGGCUUUCUAACAUGGCCCGCCGUCUAGCUAACGGAAGAGAGCAA
((((.(((...)))))))........((((((((.............)))))))).......................
[ "URS0001A2460E_1675527/1-78", "URS0001A235A6_1415756/1-67" ]
[ "GGGGACCUUCGGGGCCCUUUA-ACAUAGGCGGGUCGGCUUUCUAACAUGGCCCGCCGUCUAGCU-AACGGAAGAGAGCAA", "AGGGACCUUCGGGGCCCUUCACACAUAGG----------GUCGAAAGCGAC---CCGUAUAGCUAAACGGAAGAGAGCAA" ]
rfam_14_5_mafft
URS0001A24619_1585974_1-37
CUUUGAAGUUAGACAAAAAAUUUCAAGGCGGAAGGAG
((((((((............)))))))).........
[ "URS0001A24619_1585974/1-37", "URS0001A244C6_1050201/1-34", "URS0001A23F0A_12908/1-34", "URS0001A2363C_999415/1-34", "URS0001A23B00_1658109/1-34", "URS0001A24AF7_12908/1-34", "URS0001A2396E_12908/1-33", "URS0001A249CF_12908/1-31", "URS0001A24056_12908/1-31", "URS0001A24357_12908/1-34" ]
[ "CUUUGAAGUUAGACAAAAAAUUUCAAGGCGGAAGGAG", "CUUUAAAUC---AGCAAAUGAUUUAAGGCGGAAGGAG", "CUUUGGAUU---CGCAUGAAAUCCAAGGCGGAAGGAG", "CUUUGGAGU---AGCAUAUAUUUCAAGGCGGAAGGAG", "CUUUGAAGU---AGCAGAUAUUUCAAGGCGGAAGGAG", "CUUUGAAGU---AGCAUAUAUUUCAAGGCGGAAGGAG", "CUUUGUAGU----GAGAAACCUACAAGGCGGAAGGAG", "--CUAUAAC----U...
rfam_14_5_mafft
URS0001A24624_2342_1-56
CGCGUGGUGUCUGGUUAUAAAGUAGACCGGAUAGCGACGCGGCCUUACGAAGAGGU
(((((.((..((((((........))))))...)).)))))...............
[ "URS0001A24624_2342/1-56", "URS0001A24081_1111728/1-51", "URS0001A23CE3_1214065/1-54", "URS0001A23FFF_343509/1-54", "URS0001A247DA_12908/1-54", "URS0001A24AA5_1239307/1-54", "URS0001A2476A_1263550/1-53", "URS0001A2476A_634503/1-53", "URS0001A24366_667121/1-53", "URS0001A245F8_1216966/1-53" ]
[ "CGCGUGGUGUCUGGUUAUAAAGUAGACCGGAUAGCGACGCGGCCUUACGAAGAGGU", "CGCGUGGUGUUCGGC---AAUAGUGACCGGAUAGCGACGCGGCUUAAGAGAGGC--", "CGCGUGGUGUGCGGC--GAAAAAUGACCGUAUAGCGACGCGGCCUUAACUAGAGGU", "CGCGUGGUGUCUGGC--UAAAGUAGACUGGAUAGCGACGCGGCCUUAUGAAGAGGU", "CGCGUGGUGUCCGGC--GUAAGCAGACCGGAUAGCGACGCGGCCUUACGAUGAGGU", "CGCGU...
rfam_14_5_mafft
URS0001A2463E_12908_1-55
CGUGUGGUGUCUGGCAUAGGAUCAGAUAGCGACACGGCCUACAAAACACAGAGGU
(((((.((..(((((....).))))...)).)))))...................
[ "URS0001A2463E_12908/1-55", "URS0001A2405F_12908/1-49", "URS0001A23EB3_12908/1-50", "URS0001A234A5_12908/1-54", "URS0001A23E11_12908/1-52", "URS0001A23F32_1279015/1-52", "URS0001A23F32_511062/1-52", "URS0001A23D79_12908/1-55", "URS0001A2462A_1185651/1-50", "URS0001A23D7B_218936/1-54" ]
[ "CGUGUGGUGUCUGG--CAUAGGAUCAGAUAGCGACACGGCCUACAAAACACAGAGGU", "CGUGUGGUGUCUGU-UGAAACACAUAGAUAGCGACACGGCCG-------ACAGAGGU", "CGUGUGGUGUCCGA-CUUCGGGUUU-GAUAGCGACACGGCCUAA-----AUUGAGGU", "CGUGUGGUGUCUGG--CGUGAGGCUGGAUGGCGACACGGCCUAAUAUA-UUAGAGGU", "CGUGUGGUGUCUGG--CUCUGGAUCAGAUAGCGACACGGCCUACAG---AUAGAGGU", "...
rfam_14_5_mafft
URS0001A24656_12908_1-75
GAAGGAUGUCUUAGGUCCUUCGGUCUCGUCGUGUUAAUAGCUGUACUUUUGGCCGAGUGCGGUGGUUAGUGAAUC
((((((.........))))))............(((((.(((((((((......))))))))).)))))......
[ "URS0001A24656_12908/1-75", "URS0001A23935_12908/1-75" ]
[ "GAAGGAUGUCUUAGGUCCUUCGGUCUCGUCGUGUUAAUAGCUGUACUUUUGGCCGAGUGCGGUGGUUAGUGAAUC", "GAAGGAUGUCUUAGGUCCUUCGGUCUCGUCGUGUUAAUAGCGGUACUUUUGGCCGAGUGCAGUGGUUAGUGAAUC" ]
rfam_14_5_mafft
URS0001A24659_1451189_1-67
ACUCAGGCACGACCACCUGCGCAACGCUAGCCGCUGUGGACCGACCUGAUGUACACAACCUAAGGGA
((.((((.....((((..(((...)))........)))).....))))..))...............
[ "URS0001A24659_1451189/1-67", "URS0001A240F3_306537/1-62", "URS0001A23A38_38289/1-62", "URS0001A2444F_525262/1-62", "URS0001A2444F_38289/1-62", "URS0001A23A29_38289/1-61", "URS0001A24053_38289/1-61", "URS0001A23453_38289/1-61", "URS0001A24A28_38289/1-61", "URS0001A23414_1267754/1-60" ]
[ "ACUCAGGCACGACCACCUGCGCAACGCUAGCCGCUGUGGACCGACCUGAUGUACACAACCUAAGGGA-", "ACUCAGGCACGACCCGC------GCACGUAACGCGCGAGACCGACCUGAUGUACACGUACCUAAGGGA", "ACUCAGGCACGACCCGC------GCAGGUAACGCACGGGACCGACCUGAUGUACACGUACCUAAGGGA", "ACUCAGGCACGACCCGC------GCAAGUAACGCACGGGACCGACCUGAUGUACACGUACCUAAGGGA", "ACUCAGGCACGACCCGC--...
rfam_14_5_mafft
URS0001A24666_12908_1-54
GAAAGGCUGUAUGAACAUACAGCUGGGUGUCAUGCACUUGACGCCCCAGUUAGA
....((((((((....))))))))((((((((......))))))))........
[ "URS0001A24666_12908/1-54", "URS0001A2334C_12908/1-52", "URS0001A2331D_12908/1-52", "URS0001A248C3_12908/1-50" ]
[ "GAAAGGCUGUAU--GAACAUACAGCUGGGUGUC-AUGCACUUGACGCCCCAGUUAGA", "GAAAGGCUGUAUGGGUGCAUACAGCUGGGUGUCUAUG-----CACACCCCAGUCAGA", "GAAAGGCUGUAU-UUCACAUACAGCUGGGUGUCCAUGU----UACACCCCAGUUAGA", "GAAAGGCUGUAU--UUUCAUACAGCUGGGUACC-ACAC----GGUGCCCCAGUUAGA" ]
rfam_14_5_mafft
URS0001A2466E_12908_1-63
GUGGACCUACGGGGCCAUAUAACCACAACGAUCAAUUGAUCGUUUAAAAACGGAAGACAGAAA
((((.(((...)))))))........(((((((....)))))))...................
[ "URS0001A2466E_12908/1-63", "URS0001A23A3E_12908/1-63", "URS0001A236B6_12908/1-63", "URS0001A237EE_12908/1-63" ]
[ "GUGGACCUACGGGGCCAUAUAACCACAACGAUCAAUUGAUCGUUUAAAAACGGAAGACAGAAA", "ACGGACCUACGGGGCCGUAUAACCAAUACGAUCAACUGAUCGUUUAAAAACGGAAGACAGAAA", "GCGGACCUACGGGGCCGUAUAACCAAUACGAUCAUUUGAUCGUUUAAAAACGGAAGACAGAAA", "GCGGACCUACGGGGCCGUAUAACCAAUACGAUCAAUUGAUCGUUUAAAAACGGAAGACAGAAA" ]
rfam_14_5_mafft
URS0001A24670_351160_1-67
CGGGAUACGUUCCCGCCGGGAUGUGGCCUAUCCAUAUUCAUCAUGACAGGAUAGGUUGAACCAGGAA
(((((.....)))))..((.....(((((.......................)))))...)).....
[ "URS0001A24670_351160/1-67", "URS0001A2438D_12908/1-55" ]
[ "CGGGAUACGUUCCCGCCGGGAUGUGGCCUAUCCAUAUUCAUCAUGACAGGAUAGGUUGAACCAGGAA", "CGGGAUCCG-UCCCGCCGGGAUGUGGACGUUCCUGAU-----------GGAACGUUUGAACCACGAA" ]
rfam_14_5_mafft
URS0001A2468F_12908_1-75
ACGCAAACGGUGUUCAUGCGUGGCAUGAAGCCGCGAAAGCAGGGAUGCGCAAUACCUGCUUUCCGCCAUUUGCGC
.((((((.(((((((((((...))))))).....((((.((((...........)))).)))))))).)))))).
[ "URS0001A2468F_12908/1-75", "URS0001A2468F_517417/1-75" ]
[ "ACGCAAACGGUGUUCAUGCGUGGCAUGAAGCCGCGAAAGCAGGGAUGCGCAAUACCUGCUUUCCGCCAUUUGCGC", "ACGCAAACGGUGUUCAUGCGUGGCAUGAAGCCGCGAAAGCAGGGAUGCGCAAUACCUGCUUUCCGCCAUUUGCGC" ]
rfam_14_5_mafft
URS0001A24696_12908_1-115
AGGCACCUUAGUAGCCGGUUUCUUGCGAAACCUGCGGGCGGGGGCCUUAAACAUAGCGGCGGGUAAACCUGCCGCCAGUCGGGGAAACCCGACUUAGCUAAACGGAAGACAGAAA
((((.(((................................)))))))..........(.(((((......................))))).)......................
[ "URS0001A24696_12908/1-115", "URS0001A23F1D_12908/1-113", "URS0001A243CE_351016/1-75" ]
[ "AGGCACCUUAGUAGCCGGUUUCUUGCGAAACCUGCGGGCGGGGGCCUUAAACAUAGCGGCGGGUAAACCUGCCGCCAGUCGGGGAAACCCGACUUAGCUAAACGGAAGACAGAAA", "GGGCACCUUAGUAGCCGGUUUUGCACGAAAUCUGCGGACGGGGGCCUUAAACAUAGC-GCAGGAAAACCUG-CGCGCGGCGGGGAGACCCGCCGGAGCUAAACGGAAGACAGAAA", "GGCCACCUU-----------------------------CGGGGGGCUUAACCAUAG--GCGGAUUUGCCUC--...
rfam_14_5_mafft
URS0001A246A1_12908_1-69
UAUAUUUGCCCCUCAAUUCUGAGAGCCAGAAUUGUUUGCAUAAAAAUUAUUUAAACAAAUAUUGGAAUG
.............((((((.........))))))...................................
[ "URS0001A246A1_12908/1-69", "URS0001A2347C_12908/1-67", "URS0001A237F3_12908/1-69", "URS0001A2462B_12908/1-69", "URS0001A23CAC_12908/1-69", "URS0001A23F1F_12908/1-69", "URS0001A23EE0_12908/1-69", "URS0001A24A59_12908/1-68" ]
[ "UAUAUUUGCCCCUCAAUUCUGAGAGCCAGAAUUGUUUGCAUAAAAAUUAUUUAAACAAAUAUUGGAAUG", "UAUAUUUGCCACUUGAUUGUCUCAA--AAAAUUGAUUACAUAAAAAUUAUUUAAAGAAAUAUUGGAAUG", "UAUAUUUGCCGUUCAAUUCUUAUAAGCAGAAUUGUUUACAUAAAAAUUAUUUAAACAAAUAUUGGAAUG", "UAUAUUUGCACCUCAAUUCUGAGAGCCAGAAUUGUUUGCAUAAAAAUUAUUUAAACAAAUAUUGGAAUG", "UAUAUUUGCCCCUCA...
rfam_14_5_mafft
URS0001A246A3_12908_1-92
GGGGACCUUCGGGGCCCUAAAAGACCGAGCAAAACAAAUGCUCGAAACAUACUGGUCGGGGCAACCCGAUCUUGCUUAACGGAAGACAGAAA
((((.(((...))))))).......((.(.........(((...................))).).))........................
[ "URS0001A246A3_12908/1-92", "URS0001A23BD1_12908/1-91", "URS0001A24B04_12908/1-91" ]
[ "GGGGACCUUCGGGGCCCUAAAAGACCGAGCAAAACAAAUGCUCGAAACAUACUGGUCGGGGCAACCCGAUCUUGCUUAACGGAAGACAGAAA", "GGGGACCUUCGGGGCCCUAAAAGACCGAGCAAAACAAAUGCUCGAAACAUAC-GGUCGGGGCAACCCGACCUUGCUUAACGGAAGACAGAAA", "GGGGACCUUCGGGGCCCUAAAAGACCGAGCAAAACAAA-GCUCGAAACAUACUGGUCGGGGCAACCCGAUCUUGCUUAACGGAAGACAGAAA" ]
rfam_14_5_mafft
URS0001A246A5_12908_1-58
GAAAGGUCGUUCUUUCGCCAAAGACGACUGGGUGUUUUACCGAGGCACCCCAAUUAGG
....(((((((...........)))))))((((((((.....))))))))........
[ "URS0001A246A5_12908/1-58", "URS0001A238E0_12908/1-57", "URS0001A24B09_12908/1-57" ]
[ "GAAAGGUCGUUCUUUCGCCAAAGACGACUGGGUGUUUUACCGAGGCACCCCAAUUAGG", "GAAAGGUUGCU-UUACGCCAAAAGCGACUGGGUGUUUUACCGAGGCACCCCAAUUAGG", "GAAAGGUCGCU-UUACGCCAAAAGCGGCUGGGUGUUUUACCGAGGCACCCCAAUUAGG" ]
rfam_14_5_mafft
URS0001A246B6_12908_1-28
UAACCACUGGCGAUAUACGUGUAUGUUG
((((...(.(((.....)))..).))))
[ "URS0001A246B6_12908/1-28", "URS0001A23539_12908/1-28", "URS0001A244FA_12908/1-28", "URS0001A23D6B_12908/1-28", "URS0001A249A6_12908/1-28" ]
[ "UAACCACUGGCGAUAUACGUGUAUGUUG", "CAACCGCUGACGAAAAACGUGUAUGUUG", "UAACCUCUGGCGAAGGACGUGUAUGUUA", "UAACCACUGGCGAUAACCGUGUAUGUUG", "UAACCACUGGCGAGAUACGUGAAUGUUG" ]
rfam_14_5_mafft
URS0001A246BA_12908_1-83
CCUGCCUGUGCAGGUCGGGAUGUGGCUGGCGGGGUCUCUGACCCCGGGCAGGCGGCACCGCCGCCGGAGAGCUGAACCACACA
(((((....)))))..((.....((((..........................................))))...)).....
[ "URS0001A246BA_12908/1-83", "URS0001A23CAA_12908/1-77" ]
[ "CCUGCCUGUGCAGGUCGGGAUGUGGCUGGCGGGGUCUCUGACCCCGGGCAGGCGGCACCGCCGCCGGAGAGCUGAACCACACA", "CCUGUCUGUGCAGGUCGGGAUGUGACCAGCGGGGUCGAAGACCCCA---AAACGGCGUCGCCGCCGG---GUUGAACCACGCA" ]
rfam_14_5_mafft
URS0001A246C0_12908_1-68
UAUCUUUGCAGCCGUAUUGACCAAGGUGGUUAGUCUACAUAAUAAUCAUUUACACAAAUAUUAGCAUG
...............(((((.........)))))..................................
[ "URS0001A246C0_12908/1-68", "URS0001A24435_12908/1-66", "URS0001A243DC_12908/1-66", "URS0001A247CA_12908/1-68", "URS0001A23EA2_12908/1-68", "URS0001A24255_12908/1-56" ]
[ "UAUCUUUGCAGCCGUAUUGACCAAGGUGGUUAGUCUACAUAAUAAUCAUUUACACAAAUAUUAGCAUG", "UAUCUUCGCACCGUAAUU-CCAAGAGUUGGAGUUCUACAUAAUAAUCAUUCA-AGUAAUAUUGGCAUG", "UAUAUUUGCGCCUUGAUA--UGAACGACGUAUCAUUACAUAAUAAUCAUUUACAAUAAUAUUGGCAUG", "UAUCUUUGCAGCCGUAUUGAUCAAGGUGAUCAGUCUACAUAAUAAUCAUUUACACAAAUAUUAGCAUG", "UAUCUUUGCAGCCGUAUUG...
rfam_14_5_mafft
URS0001A246D1_12908_1-48
CCCGAUCUGUUCGGGAUGACAUGUGGCGCAGAUGCGCUGAAUCGCAAC
(((((.....)))))..((.....(((((....)))))...)).....
[ "URS0001A246D1_12908/1-48", "URS0001A23886_12908/1-48", "URS0001A24014_12908/1-48", "URS0001A238C8_12908/1-48", "URS0001A23A92_12908/1-48" ]
[ "CCCGAUCUGUUCGGGAUGACAUGUGGCGCAGAUGCGCUGAAUCGCAAC", "CCCGAUCCGUUCGGGAUGACAUGUGGCGCAGGUGCGCUGAAUCGCAAC", "CCCGAUCCGUUCGGGAUGACAUGUGGCGCAGAUGCGCUGAAUCGCAAC", "CCCGAUCCGUUCGGGAUGACAUGUGGCGCAGACGCGCUGAAUCGCAAG", "CCCGAUCAGUUCGGGAUGACAUGUGGCGCAGACGCGCUGAAUCGCAAG" ]
rfam_14_5_mafft
URS0001A246DE_12908_1-72
ACGGUUCCGGUUGACGGCGCGAUCGGCAGCACGCCCGCGCCCGUCUUGAGGAGCACCGCCGACCCGGCGACC
..(((.((((....(((((.....................................)))))..))))..)))
[ "URS0001A246DE_12908/1-72", "URS0001A234C8_927661/1-50" ]
[ "ACGGUUCCGGUUGACGGCGCGAUCGGCAGCACGCCCGCGCCCGUCUUGAGGAGCACCGCCGACCCGGCGACC", "UCGGUUCCGGUUCACGCUGCGCU-----------------CCGCCUGGAGG-----CCGCGACCCGGCGACC" ]
rfam_14_5_mafft
URS0001A246FD_12908_1-76
GGGGGAAGUCUUACGCCCCCCGCCGGGCAAAGUGUUAAUAGCGCCGCUUGUGGCCGAGCGUCGCGGUUAGUGAAUC
(((((..........)))))..............(((((.(((.(((((......))))).))).)))))......
[ "URS0001A246FD_12908/1-76", "URS0001A24545_12908/1-75" ]
[ "GGGGGAAGUCUUACGCCCCCCGCCGGGCAAAGUGUUAAUAGCGCCGCUUGUGGCCGAGCGUCGCGGUUAGUGAAUC", "GGGGGAAGUCUUA-GCCCCCCGCCGGGCAAAGUGUUAAUAGCGCCGCUUGUGGCCGAGCGUCGCGGUUAGUGAAUC" ]
rfam_14_5_mafft
URS0001A24712_12908_1-36
GCCUUGGUCGGAAACCAAGGCACUCUGUCAAAGGAG
((((((((.....))))))))...............
[ "URS0001A24712_12908/1-36", "URS0001A239F1_12908/1-33", "URS0001A24083_12908/1-34", "URS0001A2481B_12908/1-33", "URS0001A23893_1531429/1-33", "URS0001A2377A_12908/1-30", "URS0001A241EF_1235794/1-31", "URS0001A237EB_1121866/1-31", "URS0001A23C4B_12908/1-33", "URS0001A247D3_502558/1-33" ]
[ "-GCCUUGGUCGGAAACCAAGGCACUCUGUCAAAGGAG", "-GGCUUGGUCGGAAACCAAGCCU---CGAUAAAGGAG", "-GCCUUGAUCGGAAACCAAGGCA--CAGAAGAAGGAG", "GCACUUGGUCGGAAACCAAGGCAC----UAGAAGGAG", "-GACUUGGUCGGAAACCAAGUCC---UCGAAAAGGAG", "-CCCUUGGUCGGAAACCAA---G---GAAGUUAGGAG", "-UCCUUGGUCGGAAACCAAG--G---GAAGAUAGGAG", "-CCCUUGGUCGGAA...
rfam_14_5_mafft
URS0001A24713_12908_1-62
CGUGUGGUGCCGGUGCAGGUGAAUUCCUGGCACGGGAGAGCGACGCGGCCCUUUACUGAGGU
(((((.((..(.((((.............)))).)....)).)))))...............
[ "URS0001A24713_12908/1-62", "URS0001A2477B_592316/1-58", "URS0001A23C3E_1681195/1-58", "URS0001A242E5_1144341/1-58", "URS0001A237CE_12908/1-59", "URS0001A2485A_660596/1-59", "URS0001A239EC_1522060/1-59", "URS0001A2428F_470934/1-59", "URS0001A24015_12908/1-59", "URS0001A24015_470931/1-59" ]
[ "CGUGUGGUGCCGGUGCAGGUGAAUUCCUGGCACGGGAGAGCGACGCGGCCCUUUACUGAGGU", "CGUGUGGUGCU-GUGCAGGUUUG-GCCUGGCAC-GGAGAGCGACACGGCCUUUUA-UGAGGU", "CGUGUGGUGCU-GUGCAGGCUGA-GCCUGGCAC-GGAGAGCGACACGGCCUUUUA-UGAGGU", "CGUGUGGUGCU-GUGCAGGCUAA-GCCUGGCAC-GGAGAGCGACACGGCCUUUUA-UGAGGU", "CGUGUGGUGCU-GUGCAGGUCAAAGCCUGGCAC-GGAGAGCGA...
rfam_14_5_mafft
URS0001A24714_12908_1-88
AGCACUCUUGGAUAGUGCUGGCAGAUGUAAGUCCGACGUGCGGCAACGCACGGGCCGGAGGGGGUUCUCCCCCGGCCUCUGGGAUUAC
((((((.......)))))).......((((..((...(((((....)))))(((((.................)))))...)).))))
[ "URS0001A24714_12908/1-88", "URS0001A24579_12908/1-84", "URS0001A23BF9_12908/1-84" ]
[ "AGCACUCUUGGAUAGUGCUGGCAGAUGUAAGUCCGACGUGCGGCAACGCACGGGCCGGAGGGGGUUCUCCCCCGGCCUCUGGGAUUAC", "AGCACUUCUGGAUAGUGCUGGCAGAUGUAAGUCCGACGUGCGGCAACGCACGGGCC----GGGGUCAUUCCCCGGCCUUUGGGAUUAC", "AGCACUUCUGGAUAGUGCUGGCAGAUGUAAGUCCGACGUGCGGCAACGCACGGGCA----GGGGUCAUUCCCCUGCCUCUGGGAUUAC" ]
rfam_14_5_mafft
URS0001A24716_1519438_1-101
GAAAGGGCGUGAAUACCGACACGCCUGGGCUGGGAUAUCGGAACAUUACUGCGUUCCGGUAGGGAACAGGAAAAAAUCCAGUGCCCGCAGCCUCAAUUUAG
....(((((((........)))))))(((((((....................................................).))))))........
[ "URS0001A24716_1519438/1-101", "URS0001A23C4A_12908/1-90" ]
[ "GAAAGGGCGUGAAUACCGACACGCCUGGGCUGGGAUAUCGGAACAUUACUGCGUUCCGGUAGGGAACAGGAAAAAAUCCAGUGCCCGCAGCCUCAAUUUAG", "GAAAGGGCGUG-UUAUAAACAUGCCUGGGCUGGGAUAUCGGUGUAUUUUCG----CCGGUAGGACAAGGUGGA------AGCGUCCGCAGCCUCAAUUAGA" ]
rfam_14_5_mafft
URS0001A24718_12908_1-76
AGGGUGUGGUGUAACACACUCUAAAUCUGCGUGUUAAUAGCUUUUCUCAUUGGCCUGGGAGAGCGGUUAGUGAAUC
((((((..........))))))...........(((((.(((.((((((......))))))))).)))))......
[ "URS0001A24718_12908/1-76", "URS0001A233AB_12908/1-70" ]
[ "AGGGUGUGGUGUAACACACUCUAAAUCUGCGUGUUAAUAGCUUUUCUCAUUGGCCUGGGAGAGCGGUUAGUGAAUC", "----AAGACUGUAAGAGUCUUAAAAUCUGUGUGUUAAUAGCAUUU-UCAUUGGCCU-GGAAUGCGGUUAGUGAAUC" ]
rfam_14_5_mafft
URS0001A24737_12908_1-75
UCAAUGCGAUGAUGCAGGAGAUUGCGUCCUGGACGGUAACUUCUGCGGAGUAUGUCCGGUCAUCGGGCGGCUGGG
.............(((.(((....(((((.))))).....))))))........(((((((.......)))))))
[ "URS0001A24737_12908/1-75", "URS0001A23817_12908/1-70", "URS0001A242B6_12908/1-68" ]
[ "UCAAUGCGAUGAUGCAGGAGAUUGCGUC-CUGGACGGUAACUUCUGCGGAGUAUGUCCGGUCAUCGGGCGGCUGGG", "-AAAUGCGAUGAACCGGGAGAUUGCUCCGAAAGGAGGUAACUUCCGGGGAGUAUGUCCGAUAAUCGGGCGG-----", "-CAAUGCGAUGAUGCAGGAGAUUGCGUC-UUGGACGGUAACUUCUGCGGAGUAUGUCCGGUCAUCGGGCG------" ]
rfam_14_5_mafft
URS0001A2474E_12908_1-39
CUCCGACGAAGGAUAAGAAUAAGACCUUAAUUCUCGGAG
((((((.(((((............))))....)))))))
[ "URS0001A2474E_12908/1-39", "URS0001A23799_12908/1-39", "URS0001A239F5_12908/1-39", "URS0001A231D8_12908/1-32" ]
[ "CUCCGACGAAGGAUAAGAAUAAGACCUUAAUUCUCGGAG", "CUUCGACGAAGGAUAAGAAUAAGACCUUAAUUCUAGGAG", "CAUCAGAGAAGGAUAAGAAUAAGACCUGAAUUCUCAAUG", "GUUUGACGAAGGAU-------AGACCUUAAUUCUCAUAC" ]
rfam_14_5_mafft