meta_Run stringclasses 42
values | meta_Link stringclasses 1
value | meta_Author stringclasses 1
value | meta_Species stringclasses 1
value | meta_Age stringclasses 4
values | meta_BSource stringclasses 1
value | meta_BType stringclasses 4
values | meta_Vaccine stringclasses 0
values | meta_Disease stringclasses 2
values | meta_Subject stringclasses 4
values | meta_Longitudinal stringclasses 1
value | meta_Unique sequences int64 843 19.8k | meta_Isotype stringclasses 1
value | meta_Chain stringclasses 1
value | source_file stringclasses 42
values | sequence_id_heavy stringlengths 27 27 | sequence_heavy stringlengths 426 1.13k | locus_heavy stringclasses 1
value | stop_codon_heavy stringclasses 1
value | vj_in_frame_heavy stringclasses 1
value | v_frameshift_heavy stringclasses 1
value | productive_heavy stringclasses 1
value | rev_comp_heavy stringclasses 1
value | complete_vdj_heavy stringclasses 2
values | v_call_heavy stringclasses 226
values | d_call_heavy stringclasses 29
values | j_call_heavy stringclasses 13
values | sequence_alignment_heavy stringlengths 322 493 | germline_alignment_heavy stringlengths 322 493 | sequence_alignment_aa_heavy stringlengths 107 164 | germline_alignment_aa_heavy stringlengths 107 164 | v_alignment_start_heavy stringclasses 1
value | v_alignment_end_heavy stringclasses 77
values | d_alignment_start_heavy stringclasses 98
values | d_alignment_end_heavy stringclasses 103
values | j_alignment_start_heavy stringclasses 199
values | j_alignment_end_heavy stringclasses 205
values | v_sequence_alignment_heavy stringlengths 219 352 | v_sequence_alignment_aa_heavy stringlengths 73 117 | v_germline_alignment_heavy stringlengths 219 352 | v_germline_alignment_aa_heavy stringlengths 73 101 | d_sequence_alignment_heavy stringlengths 5 37 ⌀ | d_sequence_alignment_aa_heavy stringlengths 1 12 ⌀ | d_germline_alignment_heavy stringlengths 5 37 ⌀ | d_germline_alignment_aa_heavy stringlengths 1 12 ⌀ | j_sequence_alignment_heavy stringlengths 22 63 | j_sequence_alignment_aa_heavy stringlengths 7 20 | j_germline_alignment_heavy stringlengths 22 63 | j_germline_alignment_aa_heavy stringclasses 194
values | fwr1_heavy stringlengths 42 117 | fwr1_aa_heavy stringlengths 14 39 | cdr1_heavy stringlengths 3 72 | cdr1_aa_heavy stringlengths 1 24 | fwr2_heavy stringlengths 30 93 | fwr2_aa_heavy stringlengths 10 31 | cdr2_heavy stringlengths 4 81 | cdr2_aa_heavy stringlengths 1 27 | fwr3_heavy stringlengths 96 175 | fwr3_aa_heavy stringlengths 32 58 | fwr4_heavy stringlengths 21 36 | fwr4_aa_heavy stringlengths 7 12 | cdr3_heavy stringlengths 9 174 | cdr3_aa_heavy stringlengths 3 58 | junction_heavy stringlengths 15 180 | junction_length_heavy stringclasses 45
values | junction_aa_heavy stringlengths 5 60 | junction_aa_length_heavy stringclasses 45
values | v_score_heavy stringclasses 174
values | d_score_heavy stringclasses 33
values | j_score_heavy stringclasses 49
values | v_cigar_heavy stringlengths 10 30 | d_cigar_heavy stringlengths 10 20 ⌀ | j_cigar_heavy stringlengths 7 17 | v_support_heavy stringlengths 5 23 | d_support_heavy stringlengths 3 9 ⌀ | j_support_heavy stringlengths 5 22 | v_identity_heavy stringlengths 4 6 | d_identity_heavy stringclasses 96
values | j_identity_heavy stringclasses 227
values | v_sequence_start_heavy stringclasses 274
values | v_sequence_end_heavy stringclasses 297
values | v_germline_start_heavy stringclasses 23
values | v_germline_end_heavy stringclasses 31
values | d_sequence_start_heavy stringclasses 301
values | d_sequence_end_heavy stringclasses 310
values | d_germline_start_heavy stringclasses 33
values | d_germline_end_heavy stringclasses 37
values | j_sequence_start_heavy stringclasses 460
values | j_sequence_end_heavy stringclasses 459
values | j_germline_start_heavy stringclasses 60
values | j_germline_end_heavy stringclasses 53
values | fwr1_start_heavy stringclasses 274
values | fwr1_end_heavy stringclasses 272
values | cdr1_start_heavy stringclasses 272
values | cdr1_end_heavy stringclasses 276
values | fwr2_start_heavy stringclasses 276
values | fwr2_end_heavy stringclasses 276
values | cdr2_start_heavy stringclasses 424
values | cdr2_end_heavy stringclasses 428
values | fwr3_start_heavy stringclasses 274
values | fwr3_end_heavy stringclasses 275
values | fwr4_start_heavy stringclasses 309
values | fwr4_end_heavy stringclasses 308
values | cdr3_start_heavy stringclasses 275
values | cdr3_end_heavy stringclasses 309
values | np1_heavy stringlengths 1 90 ⌀ | np1_length_heavy stringclasses 121
values | np2_heavy stringlengths 1 146 ⌀ | np2_length_heavy stringclasses 76
values | c_region_heavy stringlengths 1 490 ⌀ | Isotype_heavy stringclasses 6
values | Redundancy_heavy stringclasses 1
value | ANARCI_numbering_heavy stringlengths 848 2.11k | ANARCI_status_heavy stringclasses 451
values | sequence_id_light stringlengths 27 27 | sequence_light stringlengths 389 1.33k | locus_light stringclasses 3
values | stop_codon_light stringclasses 1
value | vj_in_frame_light stringclasses 1
value | v_frameshift_light stringclasses 1
value | productive_light stringclasses 1
value | rev_comp_light stringclasses 2
values | complete_vdj_light stringclasses 2
values | v_call_light stringclasses 122
values | d_call_light stringclasses 2
values | j_call_light stringclasses 16
values | sequence_alignment_light stringlengths 296 378 | germline_alignment_light stringlengths 296 378 | sequence_alignment_aa_light stringlengths 98 126 | germline_alignment_aa_light stringlengths 98 126 | v_alignment_start_light stringclasses 1
value | v_alignment_end_light stringclasses 65
values | d_alignment_start_light stringclasses 2
values | d_alignment_end_light stringclasses 2
values | j_alignment_start_light stringclasses 113
values | j_alignment_end_light stringclasses 121
values | v_sequence_alignment_light stringlengths 261 338 | v_sequence_alignment_aa_light stringlengths 86 112 | v_germline_alignment_light stringlengths 261 338 | v_germline_alignment_aa_light stringlengths 87 106 | d_sequence_alignment_light stringclasses 2
values | d_sequence_alignment_aa_light stringclasses 2
values | d_germline_alignment_light stringclasses 2
values | d_germline_alignment_aa_light stringclasses 2
values | j_sequence_alignment_light stringlengths 7 58 | j_sequence_alignment_aa_light stringlengths 2 19 | j_germline_alignment_light stringclasses 710
values | j_germline_alignment_aa_light stringclasses 146
values | fwr1_light stringlengths 60 108 | fwr1_aa_light stringlengths 20 36 | cdr1_light stringlengths 6 66 | cdr1_aa_light stringlengths 2 22 | fwr2_light stringlengths 43 78 | fwr2_aa_light stringlengths 14 26 | cdr2_light stringlengths 1 42 ⌀ | cdr2_aa_light stringlengths 2 14 ⌀ | fwr3_light stringlengths 87 159 | fwr3_aa_light stringlengths 29 53 | fwr4_light stringlengths 13 33 ⌀ | fwr4_aa_light stringlengths 4 11 ⌀ | cdr3_light stringlengths 12 69 | cdr3_aa_light stringlengths 4 23 | junction_light stringlengths 18 75 | junction_length_light stringclasses 19
values | junction_aa_light stringlengths 6 25 | junction_aa_length_light stringclasses 19
values | v_score_light stringclasses 164
values | d_score_light stringclasses 2
values | j_score_light stringclasses 31
values | v_cigar_light stringlengths 10 25 | d_cigar_light stringclasses 2
values | j_cigar_light stringlengths 7 16 | v_support_light stringlengths 5 23 | d_support_light stringclasses 2
values | j_support_light stringlengths 5 9 | v_identity_light stringlengths 4 6 | d_identity_light stringclasses 1
value | j_identity_light stringclasses 87
values | v_sequence_start_light stringclasses 300
values | v_sequence_end_light stringclasses 321
values | v_germline_start_light stringclasses 13
values | v_germline_end_light stringclasses 56
values | d_sequence_start_light stringclasses 2
values | d_sequence_end_light stringclasses 2
values | d_germline_start_light stringclasses 2
values | d_germline_end_light stringclasses 2
values | j_sequence_start_light stringclasses 453
values | j_sequence_end_light stringclasses 453
values | j_germline_start_light stringclasses 20
values | j_germline_end_light stringclasses 37
values | fwr1_start_light stringclasses 300
values | fwr1_end_light stringclasses 300
values | cdr1_start_light stringclasses 300
values | cdr1_end_light stringclasses 301
values | fwr2_start_light stringclasses 301
values | fwr2_end_light stringclasses 301
values | cdr2_start_light stringclasses 475
values | cdr2_end_light stringclasses 473
values | fwr3_start_light stringclasses 300
values | fwr3_end_light stringclasses 300
values | fwr4_start_light stringclasses 311
values | fwr4_end_light stringclasses 313
values | cdr3_start_light stringclasses 300
values | cdr3_end_light stringclasses 311
values | np1_light stringlengths 1 44 ⌀ | np1_length_light stringclasses 70
values | np2_light stringclasses 2
values | np2_length_light stringclasses 2
values | c_region_light stringlengths 1 516 ⌀ | Isotype_light stringclasses 2
values | Redundancy_light stringclasses 1
value | ANARCI_numbering_light stringlengths 920 1.61k | ANARCI_status_light stringclasses 128
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGATACGTTGAACTC-1_contig_2 | CCAGCCCTGAGATTCCCACGTGTTTCCATTCAGTGATCAGCACTGAACACAGAGGACTCGCCATGGAGTTTGGGCTGAGCTGGGTTTTCCTTGTTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGTGTGGTACGGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGGCATGAGCTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGAGTGGGTCTCTGGTATTAATTGGAATGGTGGTAGCACAGGTTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCCTTGTATCACTGTGCGAGAGAGGTGGTGGTAGCTGCTACAGGATCGTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-20*01 | IGHD2-15*01 | IGHJ2*01 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGTGTGGTACGGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGGCATGAGCTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGAGTGGGTCTCTGGTATTAATTGGAATGGTGGTAGCACAGGTTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCCTTGTATCACTGTGCGAGAGAGGTGGTGGTAGCTGCTACAGGATCGTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGTGTGGTACGGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGGCATGAGCTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGAGTGGGTCTCTGGTATTAATTGGAATGGTGGTAGCACAGGTTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCCTTGTATCACTGTGCGAGAGANGTGGTGGTAGCTGCTACNNNNNNNTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG | EVQLVESGGGVVRPGGSLRLSCAASGFTFDDYGMSWVRQAPGKGLEWVSGINWNGGSTGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYHCAREVVVAATGSWYFDLWGRGTLVTVSS | EVQLVESGGGVVRPGGSLRLSCAASGFTFDDYGMSWVRQAPGKGLEWVSGINWNGGSTGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYHCARXVVVAATXXWYFDLWGRGTLVTVSS | 1 | 296 | 298.0 | 314.0 | 322 | 370 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGTGTGGTACGGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGGCATGAGCTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGAGTGGGTCTCTGGTATTAATTGGAATGGTGGTAGCACAGGTTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCCTTGTATCACTGTGCGAGAGA | EVQLVESGGGVVRPGGSLRLSCAASGFTFDDYGMSWVRQAPGKGLEWVSGINWNGGSTGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYHCAR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGTGTGGTACGGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGGCATGAGCTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGAGTGGGTCTCTGGTATTAATTGGAATGGTGGTAGCACAGGTTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCCTTGTATCACTGTGCGAGAGA | EVQLVESGGGVVRPGGSLRLSCAASGFTFDDYGMSWVRQAPGKGLEWVSGINWNGGSTGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYHCAR | GTGGTGGTAGCTGCTAC | VVVAAT | GTGGTGGTAGCTGCTAC | VVVAAT | TGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG | WYFDLWGRGTLVTVSS | TGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG | WYFDLWGRGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGTGTGGTACGGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGVVRPGGSLRLSCAAS | GGATTCACCTTTGATGATTATGGC | GFTFDDYG | ATGAGCTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGAGTGGGTCTCTGGT | MSWVRQAPGKGLEWVSG | ATTAATTGGAATGGTGGTAGCACA | INWNGGST | GGTTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCCTTGTATCACTGT | GYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYHC | TGGGGCCGTGGCACCCTGGTCACTGTCTCCTCA | WGRGTLVTVSS | GCGAGAGAGGTGGTGGTAGCTGCTACAGGATCGTGGTACTTCGATCTC | AREVVVAATGSWYFDL | TGTGCGAGAGAGGTGGTGGTAGCTGCTACAGGATCGTGGTACTTCGATCTCTGG | 54.0 | CAREVVVAATGSWYFDLW | 18.0 | 463.037 | 33.373 | 94.899 | 119S296M145S | 416S11N17M127S3N | 440S4N49M71S | 2.6720000000000003e-132 | 2.254e-05 | 1.4759999999999998e-23 | 100.0 | 100.0 | 100.0 | 120 | 415 | 1 | 296 | 417.0 | 433.0 | 12.0 | 28.0 | 441 | 489 | 5 | 53 | 120 | 194 | 195 | 218 | 219 | 269 | 270 | 293 | 294 | 407 | 456.0 | 488.0 | 408.0 | 455.0 | G | 1 | AGGATCG | 7.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'R', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'D', '36 ': 'D', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'G'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'W', '59 ': 'N', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'G', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'L', '102 ': 'Y', '103 ': 'H', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'E', '108 ': 'V', '109 ': 'V', '110 ': 'V', '111 ': 'A', '111A': 'A', '112B': 'T', '112A': 'G', '112 ': 'S', '113 ': 'W', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'L'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'R', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGATACGTTGAACTC-1_contig_1 | TCTGAGGATACGCGTGACAGATAAGAAGGGCTGGTGGGATCAGTCCTGGTGGTAGCTCAGGAAGCAGAGCCTGGAGCATCTCCACTATGGCCTGGGCTCCACTACTTCTCACCCTCCTCGCTCACTGCACAGGTTCTTGGGCCAATTTTATGCTGACTCAGCCCCACTCTGTGTCGGAGTCTCCGGGGAAGACGGTAACCATCTCCTGCACCCGCAGCAGTGGCAGCATTGCCAGCAACTATGTGCAGTGGTACCAGCAGCGCCCGGGCAGTTCCCCCACCACTGTGATCTATGAGGATAACCAAAGACCCTCTGGGGTCCCTGATCGGTTCTCTGGCTCCATCGACAGCTCCTCCAACTCTGCCTCCCTCACCATCTCTGGACTGAAGACTGAGGACGAGGCTGACTACTACTGTCAGTCTTATGATAGCAGCAATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV6-57*01 | null | IGLJ2*01 | AATTTTATGCTGACTCAGCCCCACTCTGTGTCGGAGTCTCCGGGGAAGACGGTAACCATCTCCTGCACCCGCAGCAGTGGCAGCATTGCCAGCAACTATGTGCAGTGGTACCAGCAGCGCCCGGGCAGTTCCCCCACCACTGTGATCTATGAGGATAACCAAAGACCCTCTGGGGTCCCTGATCGGTTCTCTGGCTCCATCGACAGCTCCTCCAACTCTGCCTCCCTCACCATCTCTGGACTGAAGACTGAGGACGAGGCTGACTACTACTGTCAGTCTTATGATAGCAGCAATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | AATTTTATGCTGACTCAGCCCCACTCTGTGTCGGAGTCTCCGGGGAAGACGGTAACCATCTCCTGCACCCGCAGCAGTGGCAGCATTGCCAGCAACTATGTGCAGTGGTACCAGCAGCGCCCGGGCAGTTCCCCCACCACTGTGATCTATGAGGATAACCAAAGACCCTCTGGGGTCCCTGATCGGTTCTCTGGCTCCATCGACAGCTCCTCCAACTCTGCCTCCCTCACCATCTCTGGACTGAAGACTGAGGACGAGGCTGACTACTACTGTCAGTCTTATGATAGCAGCAATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | NFMLTQPHSVSESPGKTVTISCTRSSGSIASNYVQWYQQRPGSSPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDSSNVVFGGGTKLTVL | NFMLTQPHSVSESPGKTVTISCTRSSGSIASNYVQWYQQRPGSSPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDSSNVVFGGGTKLTVL | 1 | 294 | null | null | 295 | 331 | AATTTTATGCTGACTCAGCCCCACTCTGTGTCGGAGTCTCCGGGGAAGACGGTAACCATCTCCTGCACCCGCAGCAGTGGCAGCATTGCCAGCAACTATGTGCAGTGGTACCAGCAGCGCCCGGGCAGTTCCCCCACCACTGTGATCTATGAGGATAACCAAAGACCCTCTGGGGTCCCTGATCGGTTCTCTGGCTCCATCGACAGCTCCTCCAACTCTGCCTCCCTCACCATCTCTGGACTGAAGACTGAGGACGAGGCTGACTACTACTGTCAGTCTTATGATAGCAGCAAT | NFMLTQPHSVSESPGKTVTISCTRSSGSIASNYVQWYQQRPGSSPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDSSN | AATTTTATGCTGACTCAGCCCCACTCTGTGTCGGAGTCTCCGGGGAAGACGGTAACCATCTCCTGCACCCGCAGCAGTGGCAGCATTGCCAGCAACTATGTGCAGTGGTACCAGCAGCGCCCGGGCAGTTCCCCCACCACTGTGATCTATGAGGATAACCAAAGACCCTCTGGGGTCCCTGATCGGTTCTCTGGCTCCATCGACAGCTCCTCCAACTCTGCCTCCCTCACCATCTCTGGACTGAAGACTGAGGACGAGGCTGACTACTACTGTCAGTCTTATGATAGCAGCAAT | NFMLTQPHSVSESPGKTVTISCTRSSGSIASNYVQWYQQRPGSSPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDSSN | null | null | null | null | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | AATTTTATGCTGACTCAGCCCCACTCTGTGTCGGAGTCTCCGGGGAAGACGGTAACCATCTCCTGCACCCGCAGC | NFMLTQPHSVSESPGKTVTISCTRS | AGTGGCAGCATTGCCAGCAACTAT | SGSIASNY | GTGCAGTGGTACCAGCAGCGCCCGGGCAGTTCCCCCACCACTGTGATCTAT | VQWYQQRPGSSPTTVIY | GAGGATAAC | EDN | CAAAGACCCTCTGGGGTCCCTGATCGGTTCTCTGGCTCCATCGACAGCTCCTCCAACTCTGCCTCCCTCACCATCTCTGGACTGAAGACTGAGGACGAGGCTGACTACTACTGT | QRPSGVPDRFSGSIDSSSNSASLTISGLKTEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGTCTTATGATAGCAGCAATGTGGTA | QSYDSSNVV | TGTCAGTCTTATGATAGCAGCAATGTGGTATTC | 33.0 | CQSYDSSNVVF | 11.0 | 459.921 | null | 71.827 | 143S294M248S2N | null | 437S1N37M211S | 2.846e-131 | null | 1.598e-16 | 100.0 | null | 100.0 | 144 | 437 | 1 | 294 | null | null | null | null | 438 | 474 | 2 | 38 | 144 | 218 | 219 | 242 | 243 | 293 | 294 | 302 | 303 | 416 | 444.0 | 473.0 | 417.0 | 443.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'N', '2 ': 'F', '3 ': 'M', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'H', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'E', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'K', '18 ': 'T', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'R', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'G', '29 ': 'S', '30 ': 'I', '35 ': 'A', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'Q', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'R', '46 ': 'P', '47 ': 'G', '48 ': 'S', '49 ': 'S', '50 ': 'P', '51 ': 'T', '52 ': 'T', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'D', '65 ': 'N'}, 'fwl3': {'66 ': 'Q', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'I', '81 ': 'D', '82 ': 'S', '83 ': 'S', '84 ': 'S', '85 ': 'N', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'S', '107 ': 'Y', '108 ': 'D', '109 ': 'S', '114 ': 'S', '115 ': 'N', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGATACGTTTGGCGC-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGCGGCCGAGGGTGTCTCTTACGGTGACTACTTCGAATACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD4-17*01 | IGHJ6*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGCGGCCGAGGGTGTCTCTTACGGTGACTACTTCGAATACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGNNNNNNNNNNNNNNNNNTACGGTGACTACNNNNNNTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKAAEGVSYGDYFEYYYGMDVWGQGTTVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXXXXXYGDYXXYYYGMDVWGQGTTVTVSS | 1 | 295 | 313.0 | 324.0 | 331 | 384 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | TACGGTGACTAC | YGDY | TACGGTGACTAC | YGDY | TACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | TACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAAAGCGGCCGAGGGTGTCTCTTACGGTGACTACTTCGAATACTACTACGGTATGGACGTC | AKAAEGVSYGDYFEYYYGMDV | TGTGCGAAAGCGGCCGAGGGTGTCTCTTACGGTGACTACTTCGAATACTACTACGGTATGGACGTCTGG | 69.0 | CAKAAEGVSYGDYFEYYYGMDVW | 23.0 | 461.479 | 23.76 | 104.513 | 136S295M161S1N | 448S4N12M132S | 466S8N54M72S | 8.296e-132 | 0.01869 | 1.9940000000000002e-26 | 100.0 | 100.0 | 100.0 | 137 | 431 | 1 | 295 | 449.0 | 460.0 | 5.0 | 16.0 | 467 | 520 | 9 | 62 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 488.0 | 520.0 | 425.0 | 487.0 | CGGCCGAGGGTGTCTCT | 17 | TTCGAA | 6.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'A', '108 ': 'A', '109 ': 'E', '110 ': 'G', '111 ': 'V', '111A': 'S', '111B': 'Y', '111C': 'G', '111D': 'D', '112D': 'Y', '112C': 'F', '112B': 'E', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGATACGTTTGGCGC-1_contig_1 | GGGAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCCCTTTTCGGCCCTGGGACCAAAGTGGATATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ3*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCCCTTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCNNNTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPLFGPGTKVDIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPXFGPGTKVDIK | 1 | 284 | null | null | 288 | 319 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | null | null | null | null | TTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FGPGTKVDIK | TTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FGPGTKVDIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCCCTGGGACCAAAGTGGATATCAAA | FGPGTKVDIK | CAACAGAGTTACAGTACCCCCCTT | QQSYSTPL | TGTCAACAGAGTTACAGTACCCCCCTTTTC | 30.0 | CQQSYSTPLF | 10.0 | 444.34 | null | 62.213 | 89S284M171S3N | null | 376S6N32M136S | 1.102e-126 | null | 9.899e-14 | 100.0 | null | 100.0 | 90 | 373 | 1 | 284 | null | null | null | null | 377 | 408 | 7 | 38 | 90 | 167 | 168 | 185 | 186 | 236 | 237 | 245 | 246 | 353 | 378.0 | 407.0 | 354.0 | 377.0 | CCT | 3 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '114 ': 'S', '115 ': 'T', '116 ': 'P', '117 ': 'L'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'P', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'D', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGATACTCACAACGT-1_contig_2 | AGCTCTCAGAGAGGTGCCTTAGCCCTGGATTCCAAGGCATTTCCACTTGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTGGGGCTGTGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGACGCCCCCGGGTATTGTAGTGGTGGTAGCTGCCCCGCGGGGGGTCGTCACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-48*03 | IGHD2-15*01 | IGHJ6*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGACGCCCCCGGGTATTGTAGTGGTGGTAGCTGCCCCGCGGGGGGTCGTCACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGANNNNNNNNNNTATTGTAGTGGTGGTAGCTGCNNNNNNNNNNNNNNNNACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYEMNWVRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDAPGYCSGGSCPAGGRHYYYYGMDVWGQGTTVTVSS | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYEMNWVRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARXXXXYCSGGSCXXXXXXYYYYGMDVWGQGTTVTVSS | 1 | 296 | 307.0 | 327.0 | 344 | 402 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYEMNWVRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYEMNWVRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | TATTGTAGTGGTGGTAGCTGC | YCSGGSC | TATTGTAGTGGTGGTAGCTGC | YCSGGSC | ACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | ACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGGSLRLSCAAS | GGATTCACCTTCAGTAGTTATGAA | GFTFSSYE | ATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATAC | MNWVRQAPGKGLEWVSY | ATTAGTAGTAGTGGTAGTACCATA | ISSSGSTI | TACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGT | YYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGACGCCCCCGGGTATTGTAGTGGTGGTAGCTGCCCCGCGGGGGGTCGTCACTACTACTACTACGGTATGGACGTC | ARDAPGYCSGGSCPAGGRHYYYYGMDV | TGTGCGAGAGACGCCCCCGGGTATTGTAGTGGTGGTAGCTGCCCCGCGGGGGGTCGTCACTACTACTACTACGGTATGGACGTCTGG | 87.0 | CARDAPGYCSGGSCPAGGRHYYYYGMDVW | 29.0 | 463.037 | 41.064 | 114.126 | 136S296M178S | 442S4N21M147S6N | 479S3N59M72S | 2.907e-132 | 1.19e-07 | 2.624e-29 | 100.0 | 100.0 | 100.0 | 137 | 432 | 1 | 296 | 443.0 | 463.0 | 5.0 | 25.0 | 480 | 538 | 4 | 62 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 506.0 | 538.0 | 425.0 | 505.0 | CGCCCCCGGG | 10 | CCCGCGGGGGGTCGTC | 16.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'E'}, 'fwh2': {'39 ': 'M', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'S', '59 ': 'S', '62 ': 'G', '63 ': 'S', '64 ': 'T', '65 ': 'I'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'A', '109 ': 'P', '110 ': 'G', '111 ': 'Y', '111A': 'C', '111B': 'S', '111C': 'G', '111D': 'G', '111E': 'S', '111F': 'C', '111G': 'P', '112G': 'A', '112F': 'G', '112E': 'G', '112D': 'R', '112C': 'H', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGATACTCACAACGT-1_contig_1 | AGGAGTCAGACCCTGTCAGGACACAGCATAGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAGATGTGCCATCCGGATGACCCAGTCTCCATCCTCATTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTACCCTCGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-8*01 | null | IGKJ1*01 | GCCATCCGGATGACCCAGTCTCCATCCTCATTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTACCCTCGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GCCATCCGGATGACCCAGTCTCCATCCTCATTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTACCCTCGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | AIRMTQSPSSFSASTGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYCQQYYSYPRTFGQGTKVEIK | AIRMTQSPSSFSASTGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYCQQYYSYPRTFGQGTKVEIK | 1 | 286 | null | null | 287 | 322 | GCCATCCGGATGACCCAGTCTCCATCCTCATTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTACCCTC | AIRMTQSPSSFSASTGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYCQQYYSYP | GCCATCCGGATGACCCAGTCTCCATCCTCATTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTACCCTC | AIRMTQSPSSFSASTGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYCQQYYSYP | null | null | null | null | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GCCATCCGGATGACCCAGTCTCCATCCTCATTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGT | AIRMTQSPSSFSASTGDRVTITCRAS | CAGGGTATTAGCAGTTAT | QGISSY | TTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | GCTGCATCC | AAS | ACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGT | TLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAACAGTATTATAGTTACCCTCGGACG | QQYYSYPRT | TGTCAACAGTATTATAGTTACCCTCGGACGTTC | 33.0 | CQQYYSYPRTF | 11.0 | 447.456 | null | 69.904 | 93S286M172S1N | null | 379S2N36M136S | 1.288e-127 | null | 4.854e-16 | 100.0 | null | 100.0 | 94 | 379 | 1 | 286 | null | null | null | null | 380 | 415 | 3 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 385.0 | 414.0 | 358.0 | 384.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'A', '2 ': 'I', '3 ': 'R', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'F', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'T', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'C', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'Y', '109 ': 'S', '114 ': 'Y', '115 ': 'P', '116 ': 'R', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGATACTCATACGGT-1_contig_1 | CGAGCCCAGCACTGGAAGTCGCCGGTGTTTCCATTCGGTGATCATCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGCTACCGCTTTGGTGGGAGCTCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30-3*01 | IGHD1-26*01 | IGHJ4*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGCTACCGCTTTGGTGGGAGCTCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGNNNNNNNNNNNGTGGGAGCTNTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARATALVGALDYWGQGTLVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXXXXVGAXDYWGQGTLVTVSS | 1 | 295 | 307.0 | 315.0 | 317 | 358 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | GTGGGAGCT | VGA | GTGGGAGCT | VGA | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGCT | GFTFSSYA | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGCAATAAA | ISYDGSNK | TACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGCTACCGCTTTGGTGGGAGCTCTTGACTAC | ARATALVGALDY | TGTGCGAGAGCTACCGCTTTGGTGGGAGCTCTTGACTACTGG | 42.0 | CARATALVGALDYW | 14.0 | 461.479 | 17.992 | 81.44 | 124S295M134S1N | 430S6N9M114S5N | 440S6N42M71S | 7.765e-132 | 0.9501 | 1.641e-19 | 100.0 | 100.0 | 100.0 | 125 | 419 | 1 | 295 | 431.0 | 439.0 | 7.0 | 15.0 | 441 | 482 | 7 | 48 | 125 | 199 | 200 | 223 | 224 | 274 | 275 | 298 | 299 | 412 | 449.0 | 481.0 | 413.0 | 448.0 | CTACCGCTTTG | 11 | C | 1.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'A', '108 ': 'T', '109 ': 'A', '110 ': 'L', '112 ': 'V', '113 ': 'G', '114 ': 'A', '115 ': 'L', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGATACTCATACGGT-1_contig_2 | GGGGGAGTCAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ1*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPWTFGQGTKVEIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPWTFGQGTKVEIK | 1 | 285 | null | null | 286 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCT | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCT | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | null | null | null | null | TGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | TGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAACAGAGTTACAGTACCCCTTGGACG | QQSYSTPWT | TGTCAACAGAGTTACAGTACCCCTTGGACGTTC | 33.0 | CQQSYSTPWTF | 11.0 | 445.898 | null | 71.827 | 95S285M173S2N | null | 380S1N37M136S | 3.807e-127 | null | 1.285e-16 | 100.0 | null | 100.0 | 96 | 380 | 1 | 285 | null | null | null | null | 381 | 417 | 2 | 38 | 96 | 173 | 174 | 191 | 192 | 242 | 243 | 251 | 252 | 359 | 387.0 | 416.0 | 360.0 | 386.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'P', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGATACTCATCGGAT-1_contig_2 | GGGATCACACAACAGCCACATCCCTCCCCTACAGAAGCCCCCAGAGCGCAGCACCTCACCATGGACTGCACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCTACAGGCACCCACGCCCAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCAACCGATATTACAGTAACTCACACGTTGCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-24*01 | IGHD4-4*01 | IGHJ4*02 | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCAACCGATATTACAGTAACTCACACGTTGCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCAACAGANNNTACAGTAACTNNNNNNNNNNTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCATDITVTHTLLDYWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCATXXTVTXXXXDYWGQGTLVTVSS | 1 | 296 | 300.0 | 309.0 | 320 | 361 | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCAACCGA | QVQLVQSGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCAT | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCAACAGA | QVQLVQSGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCAT | TACAGTAACT | TVT | TACAGTAACT | TVT | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCC | QVQLVQSGAEVKKPGASVKVSCKVS | GGATACACCCTCACTGAATTATCC | GYTLTELS | ATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGT | MHWVRQAPGKGLEWMGG | TTTGATCCTGAAGATGGTGAAACA | FDPEDGET | ATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | IYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCAACCGATATTACAGTAACTCACACGTTGCTTGACTAC | ATDITVTHTLLDY | TGTGCAACCGATATTACAGTAACTCACACGTTGCTTGACTACTGG | 45.0 | CATDITVTHTLLDYW | 15.0 | 459.921 | 19.914 | 81.44 | 117S296M136S | 416S4N10M123S2N | 436S6N42M71S | 2.2690000000000004e-131 | 0.2488 | 1.628e-19 | 99.662 | 100.0 | 100.0 | 118 | 413 | 1 | 296 | 417.0 | 426.0 | 5.0 | 14.0 | 437 | 478 | 7 | 48 | 118 | 192 | 193 | 216 | 217 | 267 | 268 | 291 | 292 | 405 | 445.0 | 477.0 | 406.0 | 444.0 | TAT | 3 | CACACGTTGC | 10.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'L', '35 ': 'T', '36 ': 'E', '37 ': 'L', '38 ': 'S'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'G'}, 'cdrh2': {'56 ': 'F', '57 ': 'D', '58 ': 'P', '59 ': 'E', '62 ': 'D', '63 ': 'G', '64 ': 'E', '65 ': 'T'}, 'fwh3': {'66 ': 'I', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'E', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'T', '85 ': 'D', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'T', '107 ': 'D', '108 ': 'I', '109 ': 'T', '110 ': 'V', '111 ': 'T', '112 ': 'H', '113 ': 'T', '114 ': 'L', '115 ': 'L', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGATACTCATCGGAT-1_contig_1 | TGAGCGCAGAAGGCAGGACTCGGGACAATCTTCATCATGACCTGCTCCCCTCTCCTCCTCACCCTTCTCATTCACTGCACAGGGTCCTGGGCCCAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-51*01 | null | IGLJ2*01 | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSAVVFGGGTKLTVL | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSAVVFGGGTKLTVL | 1 | 295 | null | null | 296 | 331 | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTG | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSA | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTG | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSA | null | null | null | null | TGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGC | QSVLTQPPSVSAAPGQKVTISCSGS | AGCTCCAACATTGGGAATAATTAT | SSNIGNNY | GTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTAT | VSWYQQLPGTAPKLLIY | GACAATAAT | DNN | AAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGC | KRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | GGAACATGGGATAGCAGCCTGAGTGCTGTGGTA | GTWDSSLSAVV | TGCGGAACATGGGATAGCAGCCTGAGTGCTGTGGTATTC | 39.0 | CGTWDSSLSAVVF | 13.0 | 461.479 | null | 69.904 | 93S295M247S1N | null | 388S2N36M211S | 8.93e-132 | null | 5.609e-16 | 100.0 | null | 100.0 | 94 | 388 | 1 | 295 | null | null | null | null | 389 | 424 | 3 | 38 | 94 | 168 | 169 | 192 | 193 | 243 | 244 | 252 | 253 | 360 | 394.0 | 423.0 | 361.0 | 393.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'A', '14 ': 'A', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'K', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'N', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'D', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'G', '91 ': 'I', '92 ': 'T', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'T', '97 ': 'G', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'G', '106 ': 'T', '107 ': 'W', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'L', '114 ': 'S', '115 ': 'A', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGATACTCCACGTTC-1_contig_2 | AGTGCTTTCTGAGAGTCATGGACCTCCTGCACAAGAACATGAAACACCTGTGGTTCTTCCTCCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCCGTCGGCAGTGGCTGGTACTGGGGACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-34*01 | IGHD6-19*01 | IGHJ4*02 | CAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCCGTCGGCAGTGGCTGGTACTGGGGACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGNNNNNNGCAGTGGCTGGTACNNNNNNNTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGRRQWLVLGTDYWGQGTLVTVSS | QVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGXXQWLVXXXDYWGQGTLVTVSS | 1 | 293 | 300.0 | 313.0 | 321 | 361 | CAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGG | QVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARG | CAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGG | QVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARG | GCAGTGGCTGGTAC | QWLV | GCAGTGGCTGGTAC | QWLV | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTAT | QVQLQQWGAGLLKPSETLSLTCAVY | GGTGGGTCCTTCAGTGGTTACTAC | GGSFSGYY | TGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAA | WSWIRQPPGKGLEWIGE | ATCAATCATAGTGGAAGCACC | INHSGST | AACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGGCCGTCGGCAGTGGCTGGTACTGGGGACTGACTAC | ARGRRQWLVLGTDY | TGTGCGAGAGGCCGTCGGCAGTGGCTGGTACTGGGGACTGACTACTGG | 48.0 | CARGRRQWLVLGTDYW | 16.0 | 458.363 | 27.605 | 79.518 | 95S293M139S | 394S7N14M119S | 415S7N41M71S | 6.400000000000005e-131 | 0.001155 | 5.921e-19 | 100.0 | 100.0 | 100.0 | 96 | 388 | 1 | 293 | 395.0 | 408.0 | 8.0 | 21.0 | 416 | 456 | 8 | 48 | 96 | 170 | 171 | 194 | 195 | 245 | 246 | 266 | 267 | 380 | 423.0 | 455.0 | 381.0 | 422.0 | CCGTCG | 6 | TGGGGAC | 7.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'Q', '7 ': 'W', '8 ': 'G', '9 ': 'A', '11 ': 'G', '12 ': 'L', '13 ': 'L', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'A', '25 ': 'V', '26 ': 'Y'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'F', '35 ': 'S', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'E'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'H', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'R', '109 ': 'R', '110 ': 'Q', '111 ': 'W', '112A': 'L', '112 ': 'V', '113 ': 'L', '114 ': 'G', '115 ': 'T', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGATACTCCACGTTC-1_contig_1 | GGGAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ4*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPLTFGGGTKVEIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPLTFGGGTKVEIK | 1 | 286 | null | null | 287 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | null | null | null | null | TCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | TCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAACAGAGTTACAGTACCCCTCTCACT | QQSYSTPLT | TGTCAACAGAGTTACAGTACCCCTCTCACTTTC | 33.0 | CQQSYSTPLTF | 11.0 | 447.456 | null | 69.904 | 89S286M172S1N | null | 375S2N36M136S | 1.278e-127 | null | 4.818e-16 | 100.0 | null | 100.0 | 90 | 375 | 1 | 286 | null | null | null | null | 376 | 411 | 3 | 38 | 90 | 167 | 168 | 185 | 186 | 236 | 237 | 245 | 246 | 353 | 381.0 | 410.0 | 354.0 | 380.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGATACTCCTGCCAT-1_contig_2 | AGCTCTGGGAGAGGAGCCCCAGCCGTGAGATTCCCAGGAGTTTCCACTTGGTGATCAGCACTGAACACAGACCACCAACCATGGAGTTTGGGCTTAGCTGGGTTTTCCTTGTTGCTATTTTAAAAGGTGTCCAATGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAGTTCGGGATTTGGCGAGCTCGATACGATTTTTGGAGTGGTTACATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-49*04 | IGHD3-3*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAGTTCGGGATTTGGCGAGCTCGATACGATTTTTGGAGTGGTTACATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAGNNNNNNNNNNNNNNNNNNNNNTACGATTTTTGGAGTGGTTANNNTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVQPGRSLRLSCTASGFTFGDYAMSWVRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTRVRDLASSIRFLEWLHFDYWGQGTLVTVSS | EVQLVESGGGLVQPGRSLRLSCTASGFTFGDYAMSWVRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTRXXXXXXXXRFLEWLXFDYWGQGTLVTVSS | 1 | 301 | 323.0 | 342.0 | 346 | 388 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAG | EVQLVESGGGLVQPGRSLRLSCTASGFTFGDYAMSWVRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAG | EVQLVESGGGLVQPGRSLRLSCTASGFTFGDYAMSWVRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTR | TACGATTTTTGGAGTGGTTA | RFLEWL | TACGATTTTTGGAGTGGTTA | RFLEWL | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCT | EVQLVESGGGLVQPGRSLRLSCTAS | GGATTCACCTTTGGTGATTATGCT | GFTFGDYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTC | MSWVRQAPGKGLEWVGF | ATTAGAAGCAAAGCTTATGGTGGGACAACA | IRSKAYGGTT | GAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGT | EYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | ACTAGAGTTCGGGATTTGGCGAGCTCGATACGATTTTTGGAGTGGTTACATTTTGACTAC | TRVRDLASSIRFLEWLHFDY | TGTACTAGAGTTCGGGATTTGGCGAGCTCGATACGATTTTTGGAGTGGTTACATTTTGACTACTGG | 66.0 | CTRVRDLASSIRFLEWLHFDYW | 22.0 | 470.828 | 39.141 | 83.363 | 137S301M158S1N | 459S4N20M117S7N | 482S5N43M71S | 1.281e-134 | 4.408e-07 | 4.67e-20 | 100.0 | 100.0 | 100.0 | 138 | 438 | 1 | 301 | 460.0 | 479.0 | 5.0 | 24.0 | 483 | 525 | 6 | 48 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 317 | 318 | 431 | 492.0 | 524.0 | 432.0 | 491.0 | TTCGGGATTTGGCGAGCTCGA | 21 | CAT | 3.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'G', '36 ': 'D', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'G', '55 ': 'F'}, 'cdrh2': {'56 ': 'I', '57 ': 'R', '58 ': 'S', '59 ': 'K', '60 ': 'A', '61 ': 'Y', '62 ': 'G', '63 ': 'G', '64 ': 'T', '65 ': 'T'}, 'fwh3': {'66 ': 'E', '67 ': 'Y', '68 ': 'A', '69 ': 'A', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'D', '83 ': 'S', '84 ': 'K', '85 ': 'S', '86 ': 'I', '87 ': 'A', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'T', '106 ': 'R', '107 ': 'V', '108 ': 'R', '109 ': 'D', '110 ': 'L', '111 ': 'A', '111A': 'S', '111B': 'S', '111C': 'I', '112D': 'R', '112C': 'F', '112B': 'L', '112A': 'E', '112 ': 'W', '113 ': 'L', '114 ': 'H', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGATACTCCTGCCAT-1_contig_1 | GGGGAAGCTCAGCTTCAGCTGTGGTAGAGAAGACAGGATTCAGGACAATCTCCAGCATGGCCGGCTTCCCTCTCCTCCTCACCCTCCTCACTCACTGTGCAGGGTCCTGGGCCCAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGTCAGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-47*01 | null | IGLJ3*02 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGTCAGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGTCNGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSGQFGGGTKLTVL | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSGXFGGGTKLTVL | 1 | 295 | null | null | 297 | 328 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGTC | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGTC | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSG | null | null | null | null | GTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | FGGGTKLTVL | GTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | FGGGTKLTVL | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGC | QSVLTQPPSASGTPGQRVTISCSGS | AGCTCCAACATCGGAAGTAATTAT | SSNIGSNY | GTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTAT | VYWYQQLPGTAPKLLIY | AGGAATAAT | RNN | CAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGT | QRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | GCAGCATGGGATGACAGCCTGAGTGGTCAG | AAWDDSLSGQ | TGTGCAGCATGGGATGACAGCCTGAGTGGTCAGTTC | 36.0 | CAAWDDSLSGQF | 12.0 | 461.479 | null | 62.213 | 113S295M244S1N | null | 409S6N32M211S | 9.18e-132 | null | 1.19e-13 | 100.0 | null | 100.0 | 114 | 408 | 1 | 295 | null | null | null | null | 410 | 441 | 7 | 38 | 114 | 188 | 189 | 212 | 213 | 263 | 264 | 272 | 273 | 380 | 411.0 | 440.0 | 381.0 | 410.0 | A | 1 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'A', '12 ': 'S', '13 ': 'G', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'Y', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'R', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'Q', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'A', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'A', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'D', '113 ': 'S', '114 ': 'L', '115 ': 'S', '116 ': 'G', '117 ': 'Q'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGATACTCTATCCTA-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAACCATGCGGGAGGCCCTTTGCAGCAGCTGGGAATTCCAAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD6-13*01 | IGHJ5*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAACCATGCGGGAGGCCCTTTGCAGCAGCTGGGAATTCCAAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAANNNNNNNNNNNNNNNNNNGCAGCAGCTGGNNNNNNNNAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCANHAGGPLQQLGIPNWFDPWGQGTLVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAXXXXXXXQQLXXXNWFDPWGQGTLVTVSS | 1 | 293 | 312.0 | 322.0 | 331 | 379 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | GCAGCAGCTGG | QQL | GCAGCAGCTGG | QQL | AACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | AACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAACCATGCGGGAGGCCCTTTGCAGCAGCTGGGAATTCCAAACTGGTTCGACCCC | ANHAGGPLQQLGIPNWFDP | TGTGCGAACCATGCGGGAGGCCCTTTGCAGCAGCTGGGAATTCCAAACTGGTTCGACCCCTGG | 63.0 | CANHAGGPLQQLGIPNWFDPW | 21.0 | 458.363 | 21.837 | 94.899 | 136S293M157S3N | 447S7N11M128S3N | 466S2N49M71S | 7.117000000000005e-131 | 0.07012 | 1.5459999999999998e-23 | 100.0 | 100.0 | 100.0 | 137 | 429 | 1 | 293 | 448.0 | 458.0 | 8.0 | 18.0 | 467 | 515 | 3 | 51 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 482.0 | 514.0 | 425.0 | 481.0 | CCATGCGGGAGGCCCTTT | 18 | GAATTCCA | 8.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'N', '107 ': 'H', '108 ': 'A', '109 ': 'G', '110 ': 'G', '111 ': 'P', '111A': 'L', '111B': 'Q', '111C': 'Q', '112C': 'L', '112B': 'G', '112A': 'I', '112 ': 'P', '113 ': 'N', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGATACTCTATCCTA-1_contig_1 | ACGATACTCTATCCTAACGCATCCCTTTTCTCATACGGGGAGTCAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ2*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPYTFGQGTKLEIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPYTFGQGTKLEIK | 1 | 285 | null | null | 286 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCT | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCT | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | null | null | null | null | TACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | TACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAACAGAGTTACAGTACCCCTTACACT | QQSYSTPYT | TGTCAACAGAGTTACAGTACCCCTTACACTTTT | 33.0 | CQQSYSTPYTF | 11.0 | 445.898 | null | 71.827 | 130S285M173S2N | null | 415S2N37M136S | 4.038e-127 | null | 1.368e-16 | 100.0 | null | 100.0 | 131 | 415 | 1 | 285 | null | null | null | null | 416 | 452 | 3 | 39 | 131 | 208 | 209 | 226 | 227 | 277 | 278 | 286 | 287 | 394 | 422.0 | 451.0 | 395.0 | 421.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'P', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGATACTCTTCAACT-1_contig_2 | CGAGCCCAGCACTGGAAGTCGCCGGTGTTTCCATTCGGTGATCATCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGATTATCCCCGACCAGAGCAGTGGCTGGTACACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30-3*01 | IGHD6-19*01 | IGHJ6*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGATTATCCCCGACCAGAGCAGTGGCTGGTACACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGANNNNNNNNNNNNNNAGCAGTGGCTGGTACACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDYPRPEQWLVHYYYYGMDVWGQGTTVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXXXXXXQWLVHYYYYGMDVWGQGTTVTVSS | 1 | 296 | 311.0 | 325.0 | 326 | 384 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | AGCAGTGGCTGGTAC | QWLV | AGCAGTGGCTGGTAC | QWLV | ACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | ACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGCT | GFTFSSYA | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGCAATAAA | ISYDGSNK | TACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGATTATCCCCGACCAGAGCAGTGGCTGGTACACTACTACTACTACGGTATGGACGTC | ARDYPRPEQWLVHYYYYGMDV | TGTGCGAGAGATTATCCCCGACCAGAGCAGTGGCTGGTACACTACTACTACTACGGTATGGACGTCTGG | 69.0 | CARDYPRPEQWLVHYYYYGMDVW | 23.0 | 463.037 | 29.528 | 114.126 | 124S296M160S | 434S6N15M131S | 449S3N59M72S | 2.757e-132 | 0.0003358 | 2.4930000000000009e-29 | 100.0 | 100.0 | 100.0 | 125 | 420 | 1 | 296 | 435.0 | 449.0 | 7.0 | 21.0 | 450 | 508 | 4 | 62 | 125 | 199 | 200 | 223 | 224 | 274 | 275 | 298 | 299 | 412 | 476.0 | 508.0 | 413.0 | 475.0 | TTATCCCCGACCAG | 14 | null | 0.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'Y', '109 ': 'P', '110 ': 'R', '111 ': 'P', '111A': 'E', '111B': 'Q', '111C': 'W', '111D': 'L', '112D': 'V', '112C': 'H', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGATACTCTTCAACT-1_contig_1 | ACACACAGCTCCTCCTGCAGCAGCCCCTGACTGCTGATTTGCATCACGGGCCACTCTTTCCAGCAAGGGGATAAGAGAGGCCTGGAAGAACCTGCCCAGCCTGGGCCTCAGGAAGCAGCATCGGAGGTGCCTCAGCCATGGCATGGATCCCTCTCTTCCTCGGCGTCCTTGCTTACTGCACAGGTTCCGTGGCCTCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-1*01 | null | IGLJ2*01 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTVVFGGGTKLTVL | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTVVFGGGTKLTVL | 1 | 283 | null | null | 284 | 319 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTG | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSST | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTG | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSST | null | null | null | null | TGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTASITCSGD | AAATTGGGGGATAAATAT | KLGDKY | GCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTAT | ACWYQQKPGQSPVLVIY | CAAGATAGC | QDS | AAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGT | KRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGGCGTGGGACAGCAGCACTGTGGTA | QAWDSSTVV | TGTCAGGCGTGGGACAGCAGCACTGTGGTATTC | 33.0 | CQAWDSSTVVF | 11.0 | 442.782 | null | 69.904 | 194S283M247S2N | null | 477S2N36M211S | 4.353e-126 | null | 6.409e-16 | 100.0 | null | 100.0 | 195 | 477 | 1 | 283 | null | null | null | null | 478 | 513 | 3 | 38 | 195 | 269 | 270 | 287 | 288 | 338 | 339 | 347 | 348 | 455 | 483.0 | 512.0 | 456.0 | 482.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'K', '28 ': 'L', '29 ': 'G', '36 ': 'D', '37 ': 'K', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'C', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'Q', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'T', '95 ': 'Q', '96 ': 'A', '97 ': 'M', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'S', '114 ': 'S', '115 ': 'T', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGATGTAGCCCAATT-1_contig_2 | AGCTCTCAGAGAGGTGCCTTAGCCCTGGATTCCAAGGCATTTCCACTTGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTGGGGCTGTGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAAAGGAACTGTGGGAGATTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-48*03 | IGHD1-26*01 | IGHJ3*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAAAGGAACTGTGGGAGATTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGANNNNNNNNGTGGGAGNNTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYEMNWVRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARKELWEIAFDIWGQGTMVTVSS | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYEMNWVRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARXXXWEXAFDIWGQGTMVTVSS | 1 | 294 | 303.0 | 309.0 | 312 | 358 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYEMNWVRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYEMNWVRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GTGGGAG | WE | GTGGGAG | WE | TGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | TGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGGSLRLSCAAS | GGATTCACCTTCAGTAGTTATGAA | GFTFSSYE | ATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATAC | MNWVRQAPGKGLEWVSY | ATTAGTAGTAGTGGTAGTACCATA | ISSSGSTI | TACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGT | YYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGAGAAAGGAACTGTGGGAGATTGCTTTTGATATC | ARKELWEIAFDI | TGTGCGAGAAAGGAACTGTGGGAGATTGCTTTTGATATCTGG | 42.0 | CARKELWEIAFDIW | 14.0 | 459.921 | 14.146 | 91.054 | 136S294M135S2N | 438S6N7M120S7N | 447S3N47M71S | 2.339e-131 | 13.96 | 2.1409999999999996e-22 | 100.0 | 100.0 | 100.0 | 137 | 430 | 1 | 294 | 439.0 | 445.0 | 7.0 | 13.0 | 448 | 494 | 4 | 50 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 461.0 | 493.0 | 425.0 | 460.0 | AAGGAACT | 8 | AT | 2.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'E'}, 'fwh2': {'39 ': 'M', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'S', '59 ': 'S', '62 ': 'G', '63 ': 'S', '64 ': 'T', '65 ': 'I'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'K', '108 ': 'E', '109 ': 'L', '110 ': 'W', '112 ': 'E', '113 ': 'I', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGATGTAGCCCAATT-1_contig_1 | AGAGCTCTGGAGAAGAGCTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-20*01 | null | IGKJ3*01 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPFTFGPGTKVDIK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPFTFGPGTKVDIK | 1 | 287 | null | null | 288 | 325 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | null | null | null | null | ATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FTFGPGTKVDIK | ATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FTFGPGTKVDIK | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPGTLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCAGCTAC | QSVSSSY | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTCGGCCCTGGGACCAAAGTGGATATCAAA | FGPGTKVDIK | CAGCAGTATGGTAGCTCACCATTCACT | QQYGSSPFT | TGTCAGCAGTATGGTAGCTCACCATTCACTTTC | 33.0 | CQQYGSSPFTF | 11.0 | 449.014 | null | 73.749 | 104S287M174S3N | null | 391S38M136S | 4.49e-128 | null | 3.465e-17 | 100.0 | null | 100.0 | 105 | 391 | 1 | 287 | null | null | null | null | 392 | 429 | 1 | 38 | 105 | 182 | 183 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 399.0 | 428.0 | 372.0 | 398.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'G', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'G', '109 ': 'S', '114 ': 'S', '115 ': 'P', '116 ': 'F', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'P', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'D', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGATGTAGCTCAACT-1_contig_1 | CCACATCCCTCCTCAGAAGCCCCCAGAGCACAACTCCTTACCATGGACTGGACCTGGAGGATCCTCTTTTTGGTGGCAGCAGCCACAGGTGCCCACTCCCAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGGATCAACGCTGGCAATGGTAACACAAAATATTCACAGAAGTTCCAGGGCAGAGTCACCATTACCAGGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAAGACACGGCTGTGTATTACTGTGCGAGAGAGGGTGACTATTCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-3*01 | IGHD4-17*01 | IGHJ4*02 | CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGGATCAACGCTGGCAATGGTAACACAAAATATTCACAGAAGTTCCAGGGCAGAGTCACCATTACCAGGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAAGACACGGCTGTGTATTACTGTGCGAGAGAGGGTGACTATTCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGGATCAACGCTGGCAATGGTAACACAAAATATTCACAGAAGTTCCAGGGCAGAGTCACCATTACCAGGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAAGACACGGCTGTGTATTACTGTGCGAGAGANGGTGACTANNNCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYCAREGDYSFDYWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYCARXGDXXFDYWGQGTLVTVSS | 1 | 296 | 298.0 | 305.0 | 309 | 352 | CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGGATCAACGCTGGCAATGGTAACACAAAATATTCACAGAAGTTCCAGGGCAGAGTCACCATTACCAGGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAAGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYCAR | CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGGATCAACGCTGGCAATGGTAACACAAAATATTCACAGAAGTTCCAGGGCAGAGTCACCATTACCAGGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAAGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYCAR | GGTGACTA | GD | GGTGACTA | GD | CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACTAGCTATGCT | GYTFTSYA | ATGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGG | MHWVRQAPGQRLEWMGW | ATCAACGCTGGCAATGGTAACACA | INAGNGNT | AAATATTCACAGAAGTTCCAGGGCAGAGTCACCATTACCAGGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAAGACACGGCTGTGTATTACTGT | KYSQKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGAGGGTGACTATTCCTTTGACTAC | AREGDYSFDY | TGTGCGAGAGAGGGTGACTATTCCTTTGACTACTGG | 36.0 | CAREGDYSFDYW | 12.0 | 463.037 | 16.069 | 85.286 | 99S296M127S | 396S7N8M118S1N | 407S4N44M71S | 2.481e-132 | 3.396 | 1.0760000000000001e-20 | 100.0 | 100.0 | 100.0 | 100 | 395 | 1 | 296 | 397.0 | 404.0 | 8.0 | 15.0 | 408 | 451 | 5 | 48 | 100 | 174 | 175 | 198 | 199 | 249 | 250 | 273 | 274 | 387 | 418.0 | 450.0 | 388.0 | 417.0 | G | 1 | TTC | 3.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'R', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'A', '59 ': 'G', '62 ': 'N', '63 ': 'G', '64 ': 'N', '65 ': 'T'}, 'fwh3': {'66 ': 'K', '67 ': 'Y', '68 ': 'S', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'A', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'E', '108 ': 'G', '109 ': 'D', '113 ': 'Y', '114 ': 'S', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGATGTAGCTCAACT-1_contig_2 | GAAGAGCTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACTCTCTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-20*01 | null | IGKJ2*01 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACTCTCTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACNNNCTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSLSFGQGTKLEIK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSXXFGQGTKLEIK | 1 | 286 | null | null | 290 | 322 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSS | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSS | null | null | null | null | CTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | FGQGTKLEIK | CTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | FGQGTKLEIK | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPGTLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCAGCTAC | QSVSSSY | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAGCAGTATGGTAGCTCACTCTCT | QQYGSSLS | TGTCAGCAGTATGGTAGCTCACTCTCTTTT | 30.0 | CQQYGSSLSF | 10.0 | 447.456 | null | 64.136 | 93S286M172S4N | null | 382S6N33M136S | 1.288e-127 | null | 2.645e-14 | 100.0 | null | 100.0 | 94 | 379 | 1 | 286 | null | null | null | null | 383 | 415 | 7 | 39 | 94 | 171 | 172 | 192 | 193 | 243 | 244 | 252 | 253 | 360 | 385.0 | 414.0 | 361.0 | 384.0 | TCT | 3 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'G', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'G', '114 ': 'S', '115 ': 'S', '116 ': 'L', '117 ': 'S'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGATGTAGGACAGAA-1_contig_1 | TATCTGGGGAGCTCTGGGAGAGGAGCCCCAGCCCTGAGATTCCCAGGTGTTTCCATTCAGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTGGGACTGAGCTGGATTTTCCTTTTGGCTATTTTAAAAGGTGTCCAGTGTGAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATCGTAGATCGGCCGGGTATAGCAGTGGCTGGTACGGGACTGGCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-9*01 | IGHD6-19*01 | IGHJ6*02 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATCGTAGATCGGCCGGGTATAGCAGTGGCTGGTACGGGACTGGCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATNNNNNNNNNNNNGGGTATAGCAGTGGCTGGTACNNNNNNNNCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDRRSAGYSSGWYGTGYYYYGMDVWGQGTTVTVSS | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDXXXXGYSSGWYXXXYYYYGMDVWGQGTTVTVSS | 1 | 297 | 310.0 | 330.0 | 339 | 396 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGAT | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKD | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGAT | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKD | GGGTATAGCAGTGGCTGGTAC | GYSSGWY | GGGTATAGCAGTGGCTGGTAC | GYSSGWY | CTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGRSLRLSCAAS | GGATTCACCTTTGATGATTATGCC | GFTFDDYA | ATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGT | MHWVRQAPGKGLEWVSG | ATTAGTTGGAATAGTGGTAGCATA | ISWNSGSI | GGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGT | GYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCAAAAGATCGTAGATCGGCCGGGTATAGCAGTGGCTGGTACGGGACTGGCTACTACTACTACGGTATGGACGTC | AKDRRSAGYSSGWYGTGYYYYGMDV | TGTGCAAAAGATCGTAGATCGGCCGGGTATAGCAGTGGCTGGTACGGGACTGGCTACTACTACTACGGTATGGACGTCTGG | 81.0 | CAKDRRSAGYSSGWYGTGYYYYGMDVW | 27.0 | 464.595 | 41.064 | 112.203 | 146S297M171S1N | 455S21M138S | 484S4N58M72S | 9.941e-133 | 1.198e-07 | 1.002e-28 | 100.0 | 100.0 | 100.0 | 147 | 443 | 1 | 297 | 456.0 | 476.0 | 1.0 | 21.0 | 485 | 542 | 5 | 62 | 147 | 221 | 222 | 245 | 246 | 296 | 297 | 320 | 321 | 434 | 510.0 | 542.0 | 435.0 | 509.0 | CGTAGATCGGCC | 12 | GGGACTGG | 8.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'D', '36 ': 'D', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'G'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'W', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'I'}, 'fwh3': {'66 ': 'G', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'L', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'D', '108 ': 'R', '109 ': 'R', '110 ': 'S', '111 ': 'A', '111A': 'G', '111B': 'Y', '111C': 'S', '111D': 'S', '111E': 'G', '111F': 'W', '112F': 'Y', '112E': 'G', '112D': 'T', '112C': 'G', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGATGTAGGACAGAA-1_contig_2 | GATCAGGACTTCTCAGTTCATCTTCTCACCATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGATACCTGGATCCAGTGCAGATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCCGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV2D-29*01 | null | IGKJ5*01 | GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCCGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCCGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | DIVMTQTPLSLSVTPGQPASISCKSSQSLLHSDGKTYLYWYLQKPGQPPQLLIYEVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQSIQLPITFGQGTRLEIK | DIVMTQTPLSLSVTPGQPASISCKSSQSLLHSDGKTYLYWYLQKPGQPPQLLIYEVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQSIQLPITFGQGTRLEIK | 1 | 299 | null | null | 300 | 337 | GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCC | DIVMTQTPLSLSVTPGQPASISCKSSQSLLHSDGKTYLYWYLQKPGQPPQLLIYEVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQSIQLP | GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCC | DIVMTQTPLSLSVTPGQPASISCKSSQSLLHSDGKTYLYWYLQKPGQPPQLLIYEVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQSIQLP | null | null | null | null | GATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | GATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGT | DIVMTQTPLSLSVTPGQPASISCKSS | CAGAGCCTCCTGCATAGTGATGGAAAGACCTAT | QSLLHSDGKTY | TTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTAT | LYWYLQKPGQPPQLLIY | GAAGTTTCC | EVS | AACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGC | NRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYC | TTCGGCCAAGGGACACGACTGGAGATTAAA | FGQGTRLEIK | ATGCAAAGTATACAGCTTCCGATCACC | MQSIQLPIT | TGCATGCAAAGTATACAGCTTCCGATCACCTTC | 33.0 | CMQSIQLPITF | 11.0 | 467.712 | null | 73.749 | 90S299M174S3N | null | 389S38M136S | 1.052e-133 | null | 3.452e-17 | 100.0 | null | 100.0 | 91 | 389 | 1 | 299 | null | null | null | null | 390 | 427 | 1 | 38 | 91 | 168 | 169 | 201 | 202 | 252 | 253 | 261 | 262 | 369 | 397.0 | 426.0 | 370.0 | 396.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'T', '8 ': 'P', '9 ': 'L', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'V', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'P', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'L', '30 ': 'L', '31 ': 'H', '32 ': 'S', '34 ': 'D', '35 ': 'G', '36 ': 'K', '37 ': 'T', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'Y', '41 ': 'W', '42 ': 'Y', '43 ': 'L', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'P', '50 ': 'P', '51 ': 'Q', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'E', '57 ': 'V', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'F', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'K', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'G', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'M', '106 ': 'Q', '107 ': 'S', '108 ': 'I', '109 ': 'Q', '114 ': 'L', '115 ': 'P', '116 ': 'I', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'R', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGATGTAGGACCACA-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAATCTGCCCATTACTATGATAGTAGTGGTCCGGCCGACTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD3-22*01 | IGHJ6*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAATCTGCCCATTACTATGATAGTAGTGGTCCGGCCGACTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAANNNNNNNATTACTATGATAGTAGTGGTNNNNNNNNNTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKSAHYYDSSGPADYYYYYGMDVWGQGTTVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXXYYDSSGXXXYYYYYGMDVWGQGTTVTVSS | 1 | 294 | 302.0 | 321.0 | 331 | 390 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | ATTACTATGATAGTAGTGGT | YYDSSG | ATTACTATGATAGTAGTGGT | YYDSSG | TACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | TACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAAATCTGCCCATTACTATGATAGTAGTGGTCCGGCCGACTACTACTACTACTACGGTATGGACGTC | AKSAHYYDSSGPADYYYYYGMDV | TGTGCGAAATCTGCCCATTACTATGATAGTAGTGGTCCGGCCGACTACTACTACTACTACGGTATGGACGTCTGG | 75.0 | CAKSAHYYDSSGPADYYYYYGMDVW | 25.0 | 459.921 | 39.141 | 116.049 | 136S294M168S2N | 437S2N20M141S9N | 466S2N60M72S | 2.4690000000000004e-131 | 4.423e-07 | 6.784e-30 | 100.0 | 100.0 | 100.0 | 137 | 430 | 1 | 294 | 438.0 | 457.0 | 3.0 | 22.0 | 467 | 526 | 3 | 62 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 494.0 | 526.0 | 425.0 | 493.0 | TCTGCCC | 7 | CCGGCCGAC | 9.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'S', '108 ': 'A', '109 ': 'H', '110 ': 'Y', '111 ': 'Y', '111A': 'D', '111B': 'S', '111C': 'S', '111D': 'G', '111E': 'P', '112E': 'A', '112D': 'D', '112C': 'Y', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGATGTAGGACCACA-1_contig_1 | AGCTTCAGCTGTGGGTAGAGAAGACAGGACTCAGGACAATCTCCAGCATGGCCAGCTTCCCTCTCCTCCTCACCCTCCTCACTCACTGTGCAGGGTCCTGGGCCCAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGCCTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-44*01 | null | IGLJ2*01 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGCCTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGNNTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGLVFGGGTKLTVL | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGXVFGGGTKLTVL | 1 | 293 | null | null | 296 | 331 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGG | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGG | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNG | null | null | null | null | TGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGC | QSVLTQPPSASGTPGQRVTISCSGS | AGCTCCAACATCGGAAGTAATACT | SSNIGSNT | GTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTAT | VNWYQQLPGTAPKLLIY | AGTAATAAT | SNN | CAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGT | QRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | GCAGCATGGGATGACAGCCTGAATGGCCTGGTA | AAWDDSLNGLV | TGTGCAGCATGGGATGACAGCCTGAATGGCCTGGTATTC | 39.0 | CAAWDDSLNGLVF | 13.0 | 458.363 | null | 69.904 | 104S293M249S3N | null | 399S2N36M211S | 7.883000000000005e-131 | null | 5.708e-16 | 100.0 | null | 100.0 | 105 | 397 | 1 | 293 | null | null | null | null | 400 | 435 | 3 | 38 | 105 | 179 | 180 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 405.0 | 434.0 | 372.0 | 404.0 | CC | 2 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'A', '12 ': 'S', '13 ': 'G', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'S', '37 ': 'N', '38 ': 'T'}, 'fwl2': {'39 ': 'V', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'S', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'Q', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'A', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'A', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'D', '110 ': 'S', '113 ': 'L', '114 ': 'N', '115 ': 'G', '116 ': 'L', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGATGTAGTGAAGAG-1_contig_2 | GGGAGCATCACCCAGCAACCACATCTGTCCTCTAGAGAATCCCCTGAGAGCTCCGTTCCTCACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCCACAGGAGCCCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGACCCTACGGTGACTAGTGGGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-2*06 | IGHD4-17*01 | IGHJ4*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGACCCTACGGTGACTAGTGGGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGANNCTACGGTGACTANNNNNTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARDPTVTSGYWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARXXTVTXXYWGQGTLVTVSS | 1 | 296 | 299.0 | 310.0 | 316 | 352 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | CTACGGTGACTA | TVT | CTACGGTGACTA | TVT | TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YWGQGTLVTVSS | TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCGGCTACTAT | GYTFTGYY | ATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGG | MHWVRQAPGQGLEWMGR | ATCAACCCTAACAGTGGTGGCACA | INPNSGGT | AACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGACCCTACGGTGACTAGTGGGTAC | ARDPTVTSGY | TGTGCGAGAGACCCTACGGTGACTAGTGGGTACTGG | 36.0 | CARDPTVTSGYW | 12.0 | 463.037 | 23.76 | 71.827 | 121S296M127S | 419S3N12M113S1N | 436S11N37M71S | 2.592e-132 | 0.01715 | 1.264e-16 | 100.0 | 100.0 | 100.0 | 122 | 417 | 1 | 296 | 420.0 | 431.0 | 4.0 | 15.0 | 437 | 473 | 12 | 48 | 122 | 196 | 197 | 220 | 221 | 271 | 272 | 295 | 296 | 409 | 440.0 | 472.0 | 410.0 | 439.0 | CC | 2 | GTGGG | 5.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'P', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'G', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'I', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'P', '109 ': 'T', '113 ': 'V', '114 ': 'T', '115 ': 'S', '116 ': 'G', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGATGTAGTGAAGAG-1_contig_1 | AGCTTCAGCTGTGGGTAGAGAAGACAGGACTCAGGACAATCTCCAGCATGGCCAGCTTCCCTCTCCTCCTCACCCTCCTCACTCACTGTGCAGGGTCCTGGGCCCAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-44*01 | null | IGLJ3*02 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGWVFGGGTKLTVL | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGWVFGGGTKLTVL | 1 | 294 | null | null | 295 | 331 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGT | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGT | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNG | null | null | null | null | TGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | TGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGC | QSVLTQPPSASGTPGQRVTISCSGS | AGCTCCAACATCGGAAGTAATACT | SSNIGSNT | GTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTAT | VNWYQQLPGTAPKLLIY | AGTAATAAT | SNN | CAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGT | QRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | GCAGCATGGGATGACAGCCTGAATGGTTGGGTG | AAWDDSLNGWV | TGTGCAGCATGGGATGACAGCCTGAATGGTTGGGTGTTC | 39.0 | CAAWDDSLNGWVF | 13.0 | 459.921 | null | 71.827 | 104S294M248S2N | null | 398S1N37M211S | 2.6770000000000004e-131 | null | 1.506e-16 | 100.0 | null | 100.0 | 105 | 398 | 1 | 294 | null | null | null | null | 399 | 435 | 2 | 38 | 105 | 179 | 180 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 405.0 | 434.0 | 372.0 | 404.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'A', '12 ': 'S', '13 ': 'G', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'S', '37 ': 'N', '38 ': 'T'}, 'fwl2': {'39 ': 'V', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'S', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'Q', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'A', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'A', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'D', '110 ': 'S', '113 ': 'L', '114 ': 'N', '115 ': 'G', '116 ': 'W', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGATGTCAACGATCT-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAATTGGATAGAATAGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD2-2*03 | IGHJ4*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAATTGGATAGAATAGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAANTGGATANNNNNGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKLDRIDYWGQGTLVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXDXXDYWGQGTLVTVSS | 1 | 294 | 296.0 | 301.0 | 307 | 346 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | TGGATA | D | TGGATA | D | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAAATTGGATAGAATAGACTAC | AKLDRIDY | TGTGCGAAATTGGATAGAATAGACTACTGG | 30.0 | CAKLDRIDYW | 10.0 | 459.921 | 12.223 | 77.595 | 136S294M123S2N | 431S6M116S25N | 442S8N40M71S | 2.287e-131 | 51.78 | 2.358e-18 | 100.0 | 100.0 | 100.0 | 137 | 430 | 1 | 294 | 432.0 | 437.0 | 1.0 | 6.0 | 443 | 482 | 9 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 449.0 | 481.0 | 425.0 | 448.0 | T | 1 | GAATA | 5.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'L', '108 ': 'D', '114 ': 'R', '115 ': 'I', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGATGTCAACGATCT-1_contig_1 | TCTGGCACCAGGGGTCCCTTCCAATATCAGCACCATGGCCTGGACTCCTCTCTTTCTGTTCCTCCTCACTTGCTGCCCAGGGTCCAATTCCCAGGCTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGGCTCCAGCACTGGAGCTGTCACCAGTGGTCATTATCCCTACTGGTTCCAGCAGAAGCCTGGCCAAGCCCCCAGGACACTGATTTATGATACAAGCAACAAACACTCCTGGACACCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACCCTTTCGGGTGCGCAGCCTGAGGATGAGGCTGAGTATTACTGCTTGCTCTCCTATAGTGGTCCTCGGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV7-46*01 | null | IGLJ2*01 | CAGGCTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGGCTCCAGCACTGGAGCTGTCACCAGTGGTCATTATCCCTACTGGTTCCAGCAGAAGCCTGGCCAAGCCCCCAGGACACTGATTTATGATACAAGCAACAAACACTCCTGGACACCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACCCTTTCGGGTGCGCAGCCTGAGGATGAGGCTGAGTATTACTGCTTGCTCTCCTATAGTGGTCCTCGGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGGCTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGGCTCCAGCACTGGAGCTGTCACCAGTGGTCATTATCCCTACTGGTTCCAGCAGAAGCCTGGCCAAGCCCCCAGGACACTGATTTATGATACAAGCAACAAACACTCCTGGACACCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACCCTTTCGGGTGCGCAGCCTGAGGATGAGGCTGAGTATTACTGCTTGCTCTCCTATAGTGGTGCTCGGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QAVVTQEPSLTVSPGGTVTLTCGSSTGAVTSGHYPYWFQQKPGQAPRTLIYDTSNKHSWTPARFSGSLLGGKAALTLSGAQPEDEAEYYCLLSYSGPRVFGGGTKLTVL | QAVVTQEPSLTVSPGGTVTLTCGSSTGAVTSGHYPYWFQQKPGQAPRTLIYDTSNKHSWTPARFSGSLLGGKAALTLSGAQPEDEAEYYCLLSYSGARVFGGGTKLTVL | 1 | 294 | null | null | 295 | 328 | CAGGCTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGGCTCCAGCACTGGAGCTGTCACCAGTGGTCATTATCCCTACTGGTTCCAGCAGAAGCCTGGCCAAGCCCCCAGGACACTGATTTATGATACAAGCAACAAACACTCCTGGACACCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACCCTTTCGGGTGCGCAGCCTGAGGATGAGGCTGAGTATTACTGCTTGCTCTCCTATAGTGGTCCTCGG | QAVVTQEPSLTVSPGGTVTLTCGSSTGAVTSGHYPYWFQQKPGQAPRTLIYDTSNKHSWTPARFSGSLLGGKAALTLSGAQPEDEAEYYCLLSYSGPR | CAGGCTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGGCTCCAGCACTGGAGCTGTCACCAGTGGTCATTATCCCTACTGGTTCCAGCAGAAGCCTGGCCAAGCCCCCAGGACACTGATTTATGATACAAGCAACAAACACTCCTGGACACCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACCCTTTCGGGTGCGCAGCCTGAGGATGAGGCTGAGTATTACTGCTTGCTCTCCTATAGTGGTGCTCGG | QAVVTQEPSLTVSPGGTVTLTCGSSTGAVTSGHYPYWFQQKPGQAPRTLIYDTSNKHSWTPARFSGSLLGGKAALTLSGAQPEDEAEYYCLLSYSGAR | null | null | null | null | GTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | CAGGCTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGGCTCCAGC | QAVVTQEPSLTVSPGGTVTLTCGSS | ACTGGAGCTGTCACCAGTGGTCATTAT | TGAVTSGHY | CCCTACTGGTTCCAGCAGAAGCCTGGCCAAGCCCCCAGGACACTGATTTAT | PYWFQQKPGQAPRTLIY | GATACAAGC | DTS | AACAAACACTCCTGGACACCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACCCTTTCGGGTGCGCAGCCTGAGGATGAGGCTGAGTATTACTGC | NKHSWTPARFSGSLLGGKAALTLSGAQPEDEAEYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | TTGCTCTCCTATAGTGGTCCTCGGGTA | LLSYSGPRV | TGCTTGCTCTCCTATAGTGGTCCTCGGGTATTC | 33.0 | CLLSYSGPRVF | 11.0 | 456.805 | null | 66.059 | 91S294M245S | null | 385S4N34M211S | 2.261e-130 | null | 7.998e-15 | 99.66 | null | 100.0 | 92 | 385 | 1 | 294 | null | null | null | null | 386 | 419 | 5 | 38 | 92 | 166 | 167 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 389.0 | 418.0 | 362.0 | 388.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'A', '3 ': 'V', '4 ': 'V', '5 ': 'T', '6 ': 'Q', '7 ': 'E', '8 ': 'P', '9 ': 'S', '11 ': 'L', '12 ': 'T', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'T', '19 ': 'V', '20 ': 'T', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'G', '25 ': 'S', '26 ': 'S'}, 'cdrl1': {'27 ': 'T', '28 ': 'G', '29 ': 'A', '30 ': 'V', '31 ': 'T', '35 ': 'S', '36 ': 'G', '37 ': 'H', '38 ': 'Y'}, 'fwl2': {'39 ': 'P', '40 ': 'Y', '41 ': 'W', '42 ': 'F', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'T', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'D', '57 ': 'T', '65 ': 'S'}, 'fwl3': {'66 ': 'N', '67 ': 'K', '68 ': 'H', '69 ': 'S', '70 ': 'W', '71 ': 'T', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'L', '83 ': 'L', '84 ': 'G', '85 ': 'G', '86 ': 'K', '87 ': 'A', '88 ': 'A', '89 ': 'L', '90 ': 'T', '91 ': 'L', '92 ': 'S', '93 ': 'G', '94 ': 'A', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'E', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'L', '106 ': 'L', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '114 ': 'G', '115 ': 'P', '116 ': 'R', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGATGTCAGCGTAAG-1_contig_2 | CGAGCCCAGCACTGGAAGTCGCCGGTGTTTCCATTCGGTGATCATCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGCGGAGTGGGAGCTACTATTCCCCCGAAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30-3*01 | IGHD1-26*01 | IGHJ4*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGCGGAGTGGGAGCTACTATTCCCCCGAAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGNNNAGTGGGAGCTACTANNNNNNNNNNACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARAEWELLFPRNWGQGTLVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXXWELLXXXXWGQGTLVTVSS | 1 | 295 | 299.0 | 312.0 | 323 | 358 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | AGTGGGAGCTACTA | WELL | AGTGGGAGCTACTA | WELL | ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WGQGTLVTVSS | ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WGQGTLVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGCT | GFTFSSYA | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGCAATAAA | ISYDGSNK | TACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGCGGAGTGGGAGCTACTATTCCCCCGAAAC | ARAEWELLFPRN | TGTGCGAGAGCGGAGTGGGAGCTACTATTCCCCCGAAACTGG | 42.0 | CARAEWELLFPRNW | 14.0 | 461.479 | 27.605 | 69.904 | 124S295M134S1N | 422S5N14M117S1N | 446S12N36M71S | 7.765e-132 | 0.001213 | 4.872e-16 | 100.0 | 100.0 | 100.0 | 125 | 419 | 1 | 295 | 423.0 | 436.0 | 6.0 | 19.0 | 447 | 482 | 13 | 48 | 125 | 199 | 200 | 223 | 224 | 274 | 275 | 298 | 299 | 412 | 449.0 | 481.0 | 413.0 | 448.0 | CGG | 3 | TTCCCCCGAA | 10.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'A', '108 ': 'E', '109 ': 'W', '110 ': 'E', '112 ': 'L', '113 ': 'L', '114 ': 'F', '115 ': 'P', '116 ': 'R', '117 ': 'N'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGATGTCAGCGTAAG-1_contig_1 | GGGGAGAAGTCTCTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCTGCTCAGCTCCTGGGACTCCTGCTGCTCTGGCTCCCAGATACCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-27*01 | null | IGKJ4*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQGISNYLAWYQQKPGKVPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQKYNSAPLTFGGGTKVEIK | DIQMTQSPSSLSASVGDRVTITCRASQGISNYLAWYQQKPGKVPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQKYNSAPLTFGGGTKVEIK | 1 | 284 | null | null | 285 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCC | DIQMTQSPSSLSASVGDRVTITCRASQGISNYLAWYQQKPGKVPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQKYNSAP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCC | DIQMTQSPSSLSASVGDRVTITCRASQGISNYLAWYQQKPGKVPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQKYNSAP | null | null | null | null | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGGGCATTAGCAATTAT | QGISNY | TTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTAT | LAWYQQKPGKVPKLLIY | GCTGCATCC | AAS | ACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGT | TLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAAAAGTATAACAGTGCCCCGCTCACT | QKYNSAPLT | TGTCAAAAGTATAACAGTGCCCCGCTCACTTTC | 33.0 | CQKYNSAPLTF | 11.0 | 444.34 | null | 73.749 | 97S284M174S3N | null | 381S38M136S | 1.125e-126 | null | 3.402e-17 | 100.0 | null | 100.0 | 98 | 381 | 1 | 284 | null | null | null | null | 382 | 419 | 1 | 38 | 98 | 175 | 176 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 389.0 | 418.0 | 362.0 | 388.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'V', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'K', '107 ': 'Y', '108 ': 'N', '109 ': 'S', '114 ': 'A', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGATGTCATCCCATC-1_contig_2 | GGAGCCCCAGCCCTGGGATTCCCAGCTGTTTCTGCTTGCTGATCAGGACTGCACACAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTTGTTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCCGGGGGAGGCTTAGTTCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGTGTGGGTCTCACGTATTAATAGTGATGGGAGTAGCACAAGCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACGCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGGGAGCAGCAGCCTGGGGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-74*01 | IGHD6-13*01 | IGHJ6*02 | GAGGTGCAGCTGGTGGAGTCCGGGGGAGGCTTAGTTCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGTGTGGGTCTCACGTATTAATAGTGATGGGAGTAGCACAAGCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACGCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGGGAGCAGCAGCCTGGGGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAGGTGCAGCTGGTGGAGTCCGGGGGAGGCTTAGTTCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGTGTGGGTCTCACGTATTAATAGTGATGGGAGTAGCACAAGCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACGCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGNNAGCAGCAGCNNNNNNTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMHWVRQAPGKGLVWVSRINSDGSSTSYADSVKGRFTISRDNAKNTLYLQMNSLRAEDTAVYYCARGSSSLGYGMDVWGQGTTVTVSS | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMHWVRQAPGKGLVWVSRINSDGSSTSYADSVKGRFTISRDNAKNTLYLQMNSLRAEDTAVYYCARXSSSXXYGMDVWGQGTTVTVSS | 1 | 295 | 298.0 | 306.0 | 313 | 360 | GAGGTGCAGCTGGTGGAGTCCGGGGGAGGCTTAGTTCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGTGTGGGTCTCACGTATTAATAGTGATGGGAGTAGCACAAGCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACGCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAG | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMHWVRQAPGKGLVWVSRINSDGSSTSYADSVKGRFTISRDNAKNTLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCCGGGGGAGGCTTAGTTCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGTGTGGGTCTCACGTATTAATAGTGATGGGAGTAGCACAAGCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACGCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAG | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMHWVRQAPGKGLVWVSRINSDGSSTSYADSVKGRFTISRDNAKNTLYLQMNSLRAEDTAVYYCAR | AGCAGCAGC | SSS | AGCAGCAGC | SSS | TACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YGMDVWGQGTTVTVSS | TACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YGMDVWGQGTTVTVSS | GAGGTGCAGCTGGTGGAGTCCGGGGGAGGCTTAGTTCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGGSLRLSCAAS | GGATTCACCTTCAGTAGCTACTGG | GFTFSSYW | ATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGTGTGGGTCTCACGT | MHWVRQAPGKGLVWVSR | ATTAATAGTGATGGGAGTAGCACA | INSDGSST | AGCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACGCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | SYADSVKGRFTISRDNAKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCAAGAGGGAGCAGCAGCCTGGGGTACGGTATGGACGTC | ARGSSSLGYGMDV | TGTGCAAGAGGGAGCAGCAGCCTGGGGTACGGTATGGACGTCTGG | 45.0 | CARGSSSLGYGMDVW | 15.0 | 461.479 | 17.992 | 92.976 | 125S295M137S1N | 422S6N9M126S6N | 437S14N48M72S | 7.825e-132 | 0.9571 | 5.565e-23 | 100.0 | 100.0 | 100.0 | 126 | 420 | 1 | 295 | 423.0 | 431.0 | 7.0 | 15.0 | 438 | 485 | 15 | 62 | 126 | 200 | 201 | 224 | 225 | 275 | 276 | 299 | 300 | 413 | 453.0 | 485.0 | 414.0 | 452.0 | GG | 2 | CTGGGG | 6.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'W'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'V', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'S', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'S', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'S', '109 ': 'S', '110 ': 'S', '111 ': 'L', '112 ': 'G', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGATGTCATCCCATC-1_contig_1 | AGCTTCAGCTGTGGTAGAGAAGACAGGATTCAGGACAATCTCCAGCATGGCCGGCTTCCCTCTCCTCCTCACCCTCCTCACTCACTGTGCAGGGTCCTGGGCCCAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGGCATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGACCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-47*01 | null | IGLJ2*01 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGGCATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGNNNTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSGHVVFGGGTKLTVL | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSGXVVFGGGTKLTVL | 1 | 293 | null | null | 297 | 334 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGG | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGG | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSG | null | null | null | null | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGC | QSVLTQPPSASGTPGQRVTISCSGS | AGCTCCAACATCGGAAGTAATTAT | SSNIGSNY | GTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTAT | VYWYQQLPGTAPKLLIY | AGGAATAAT | RNN | CAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGT | QRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | GCAGCATGGGATGACAGCCTGAGTGGGCATGTGGTA | AAWDDSLSGHVV | TGTGCAGCATGGGATGACAGCCTGAGTGGGCATGTGGTATTC | 42.0 | CAAWDDSLSGHVVF | 14.0 | 458.363 | null | 73.749 | 103S293M252S3N | null | 399S38M211S | 7.909000000000005e-131 | null | 3.984e-17 | 100.0 | null | 100.0 | 104 | 396 | 1 | 293 | null | null | null | null | 400 | 437 | 1 | 38 | 104 | 178 | 179 | 202 | 203 | 253 | 254 | 262 | 263 | 370 | 407.0 | 436.0 | 371.0 | 406.0 | GCA | 3 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGACCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'A', '12 ': 'S', '13 ': 'G', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'Y', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'R', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'Q', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'A', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'A', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'D', '110 ': 'S', '112 ': 'L', '113 ': 'S', '114 ': 'G', '115 ': 'H', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGATGTCATCTATGG-1_contig_1 | GGAGAGCCTGCTGAATTCTGGCTGACCAGGGCAGTCACCAGAGCTCCAGACAATGTCTGTCTCCTTCCTCATCTTCCTGCCCGTGCTGGGCCTCCCATGGGGTGTCCTGTCACAGGTACAGCTGCAGCAGTCAGGTCCAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGATCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCAAGACATGATAACAAAGCAGCAGCTGGTCTACTCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV6-1*01 | IGHD6-13*01 | IGHJ6*02 | CAGGTACAGCTGCAGCAGTCAGGTCCAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGATCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCAAGACATGATAACAAAGCAGCAGCTGGTCTACTCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTACAGCTGCAGCAGTCAGGTCCAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGATCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCAAGANNNNNNNNNNNAGCAGCAGCTGGTNNNNNCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLQQSGPGLVKPSQTLSLTCAISGDSVSSNSAAWNWIRQSPSRGLEWLGRTYYRSKWYNDYAVSVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYCARHDNKAAAGLLYYYYGMDVWGQGTTVTVSS | QVQLQQSGPGLVKPSQTLSLTCAISGDSVSSNSAAWNWIRQSPSRGLEWLGRTYYRSKWYNDYAVSVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYCARXXXXAAAGXXYYYYGMDVWGQGTTVTVSS | 1 | 303 | 315.0 | 327.0 | 333 | 390 | CAGGTACAGCTGCAGCAGTCAGGTCCAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGATCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCAAGA | QVQLQQSGPGLVKPSQTLSLTCAISGDSVSSNSAAWNWIRQSPSRGLEWLGRTYYRSKWYNDYAVSVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYCAR | CAGGTACAGCTGCAGCAGTCAGGTCCAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGATCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCAAGA | QVQLQQSGPGLVKPSQTLSLTCAISGDSVSSNSAAWNWIRQSPSRGLEWLGRTYYRSKWYNDYAVSVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYCAR | AGCAGCAGCTGGT | AAAG | AGCAGCAGCTGGT | AAAG | CTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CAGGTACAGCTGCAGCAGTCAGGTCCAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCC | QVQLQQSGPGLVKPSQTLSLTCAIS | GGGGACAGTGTCTCTAGCAACAGTGCTGCT | GDSVSSNSAA | TGGAACTGGATCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGG | WNWIRQSPSRGLEWLGR | ACATACTACAGGTCCAAGTGGTATAAT | TYYRSKWYN | GATTATGCAGTATCTGTGAAAAGTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGT | DYAVSVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCAAGACATGATAACAAAGCAGCAGCTGGTCTACTCTACTACTACTACGGTATGGACGTC | ARHDNKAAAGLLYYYYGMDV | TGTGCAAGACATGATAACAAAGCAGCAGCTGGTCTACTCTACTACTACTACGGTATGGACGTCTGG | 66.0 | CARHDNKAAAGLLYYYYGMDVW | 22.0 | 473.944 | 25.682 | 112.203 | 112S303M159S2N | 426S6N13M135S2N | 444S4N58M72S | 1.4209999999999998e-135 | 0.004776 | 9.351999999999999e-29 | 100.0 | 100.0 | 100.0 | 113 | 415 | 1 | 303 | 427.0 | 439.0 | 7.0 | 19.0 | 445 | 502 | 5 | 62 | 113 | 187 | 188 | 217 | 218 | 268 | 269 | 295 | 296 | 409 | 470.0 | 502.0 | 410.0 | 469.0 | CATGATAACAA | 11 | CTACT | 5.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'A', '25 ': 'I', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'D', '29 ': 'S', '30 ': 'V', '31 ': 'S', '34 ': 'S', '35 ': 'N', '36 ': 'S', '37 ': 'A', '38 ': 'A'}, 'fwh2': {'39 ': 'W', '40 ': 'N', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'S', '46 ': 'P', '47 ': 'S', '48 ': 'R', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'L', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'T', '57 ': 'Y', '58 ': 'Y', '59 ': 'R', '60 ': 'S', '62 ': 'K', '63 ': 'W', '64 ': 'Y', '65 ': 'N'}, 'fwh3': {'66 ': 'D', '67 ': 'Y', '68 ': 'A', '69 ': 'V', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'I', '77 ': 'T', '78 ': 'I', '79 ': 'N', '80 ': 'P', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'Q', '91 ': 'L', '92 ': 'N', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'H', '108 ': 'D', '109 ': 'N', '110 ': 'K', '111 ': 'A', '111A': 'A', '111B': 'A', '111C': 'G', '112D': 'L', '112C': 'L', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGATGTCATCTATGG-1_contig_2 | CTCTGACTCTGCTGATTTGCATCATGGGCCGCTCTCTCCAGCAAGGGGATAAGAGAGGCCTGGGAGGAACCTGCTCAGTCTGGGCCTAAGGAAGCAGCACTGGTGGTGCCTCAGCCATGGCCTGGACCGTTCTCCTCCTCGGCCTCCTCTCTCACTGCACAGGCTCTGTGACCTCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-21*02 | null | IGLJ2*01 | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHVVFGGGTKLTVL | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHVVFGGGTKLTVL | 1 | 288 | null | null | 289 | 325 | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCAT | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDH | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCAT | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDH | null | null | null | null | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAAC | SYVLTQPPSVSVAPGQTARITCGGN | AACATTGGAAGTAAAAGT | NIGSKS | GTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTAT | VHWYQQKPGQAPVLVVY | GATGATAGC | DDS | GACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGT | DRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGGTGTGGGATAGTAGTAGTGATCATGTGGTA | QVWDSSSDHVV | TGTCAGGTGTGGGATAGTAGTAGTGATCATGTGGTATTC | 39.0 | CQVWDSSSDHVVF | 13.0 | 450.572 | null | 71.827 | 173S288M248S2N | null | 461S1N37M211S | 1.9240000000000002e-128 | null | 1.655e-16 | 100.0 | null | 100.0 | 174 | 461 | 1 | 288 | null | null | null | null | 462 | 498 | 2 | 38 | 174 | 248 | 249 | 266 | 267 | 317 | 318 | 326 | 327 | 434 | 468.0 | 497.0 | 435.0 | 467.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'A', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'G', '25 ': 'G', '26 ': 'N'}, 'cdrl1': {'27 ': 'N', '28 ': 'I', '29 ': 'G', '36 ': 'S', '37 ': 'K', '38 ': 'S'}, 'fwl2': {'39 ': 'V', '40 ': 'H', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'V', '55 ': 'Y'}, 'cdrl2': {'56 ': 'D', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'D', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'G', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'V', '107 ': 'W', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'S', '114 ': 'D', '115 ': 'H', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGATGTGTACTTAGC-1_contig_1 | ACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACATCTGTGGTTCTTCCTTCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATTTAATTTGGAGTGGTTCGCATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-59*01 | IGHD3-3*01 | IGHJ4*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATTTAATTTGGAGTGGTTCGCATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGANNNNNTTTGGAGTGGTTNNNNTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARFNLEWFAFDYWGQGTLVTVSS | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXLEWXXFDYWGQGTLVTVSS | 1 | 291 | 297.0 | 308.0 | 313 | 355 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGA | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGA | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | TTTGGAGTGGTT | LEW | TTTGGAGTGGTT | LEW | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGTAGTTACTAC | GGSISSYY | TGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTAT | WSWIRQPPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGATTTAATTTGGAGTGGTTCGCATTTGACTAC | ARFNLEWFAFDY | TGTGCGAGATTTAATTTGGAGTGGTTCGCATTTGACTACTGG | 42.0 | CARFNLEWFAFDYW | 14.0 | 455.247 | 23.76 | 83.363 | 92S291M135S2N | 388S11N12M118S8N | 404S5N43M71S | 5.449e-130 | 0.01631 | 4.0480000000000004e-20 | 100.0 | 100.0 | 100.0 | 93 | 383 | 1 | 291 | 389.0 | 400.0 | 12.0 | 23.0 | 405 | 447 | 6 | 48 | 93 | 167 | 168 | 191 | 192 | 242 | 243 | 263 | 264 | 377 | 414.0 | 446.0 | 378.0 | 413.0 | TTTAA | 5 | CGCA | 4.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'F', '108 ': 'N', '109 ': 'L', '110 ': 'E', '112 ': 'W', '113 ': 'F', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGATGTGTACTTAGC-1_contig_2 | GCTGGGGTCTCAGGAGGCAGCGCTCTCAGGACATCTCCACCATGGCCTGGGCTCTGCTGCTCCTCACCCTCCTCACTCAGGGCACAGGGTCCTGGGCCCAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTCCTTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAGGTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV2-14*01 | null | IGLJ1*01 | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTCCTTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTCNTTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTPYVFGTGTKVTVL | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTXYVFGTGTKVTVL | 1 | 295 | null | null | 297 | 334 | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTC | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSST | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTC | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSST | null | null | null | null | TTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | YVFGTGTKVTVL | TTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | YVFGTGTKVTVL | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACC | QSALTQPASVSGSPGQSITISCTGT | AGCAGTGACGTTGGTGGTTATAACTAT | SSDVGGYNY | GTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTAT | VSWYQQHPGKAPKLMIY | GAGGTCAGT | EVS | AATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGC | NRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYC | TTCGGAACTGGGACCAAGGTCACCGTCCTA | FGTGTKVTVL | AGCTCATATACAAGCAGCAGCACTCCTTATGTC | SSYTSSSTPYV | TGCAGCTCATATACAAGCAGCAGCACTCCTTATGTCTTC | 39.0 | CSSYTSSSTPYVF | 13.0 | 461.479 | null | 73.749 | 98S295M250S2N | null | 394S38M211S | 9.047e-132 | null | 3.952e-17 | 100.0 | null | 100.0 | 99 | 393 | 1 | 295 | null | null | null | null | 395 | 432 | 1 | 38 | 99 | 173 | 174 | 200 | 201 | 251 | 252 | 260 | 261 | 368 | 402.0 | 431.0 | 369.0 | 401.0 | C | 1 | null | null | GTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'A', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'A', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'G', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'S', '19 ': 'I', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'T'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'D', '30 ': 'V', '31 ': 'G', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'M', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'V', '65 ': 'S'}, 'fwl3': {'66 ': 'N', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'S', '74 ': 'N', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'S', '106 ': 'S', '107 ': 'Y', '108 ': 'T', '109 ': 'S', '110 ': 'S', '113 ': 'S', '114 ': 'T', '115 ': 'P', '116 ': 'Y', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'T', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGATGTGTAGCGTCC-1_contig_2 | TGGGGACCCAAAAACCACACCCCTCCTTGGGAGAATCCCCTAGATCACAGCTCCTCACCATGGACTGGACCTGGAGCATCCTTTTCTTGGTGGCAGCAGCAACAGGTGCCCACTCCCAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGAACCGGTGGATACAGCCCCTTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-18*01 | IGHD5-18*01 | IGHJ4*02 | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGAACCGGTGGATACAGCCCCTTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGANNNNGTGGATACAGCNNNNNNCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAREPVDTAPCWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARXXVDTAXXWGQGTLVTVSS | 1 | 296 | 301.0 | 311.0 | 318 | 352 | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAR | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAR | GTGGATACAGC | VDTA | GTGGATACAGC | VDTA | CTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WGQGTLVTVSS | CTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WGQGTLVTVSS | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGTTACACCTTTACCAGCTATGGT | GYTFTSYG | ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGG | ISWVRQAPGQGLEWMGW | ATCAGCGCTTACAATGGTAACACA | ISAYNGNT | AACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGAACCGGTGGATACAGCCCCTTGC | AREPVDTAPC | TGTGCGAGAGAACCGGTGGATACAGCCCCTTGCTGG | 36.0 | CAREPVDTAPCW | 12.0 | 463.037 | 21.837 | 67.981 | 116S296M127S | 416S11M112S9N | 433S13N35M71S | 2.567e-132 | 0.06439 | 1.799e-15 | 100.0 | 100.0 | 100.0 | 117 | 412 | 1 | 296 | 417.0 | 427.0 | 1.0 | 11.0 | 434 | 468 | 14 | 48 | 117 | 191 | 192 | 215 | 216 | 266 | 267 | 290 | 291 | 404 | 435.0 | 467.0 | 405.0 | 434.0 | ACCG | 4 | CCCTTG | 6.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'I', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'A', '59 ': 'Y', '62 ': 'N', '63 ': 'G', '64 ': 'N', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'L', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'T', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'R', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'E', '108 ': 'P', '109 ': 'V', '113 ': 'D', '114 ': 'T', '115 ': 'A', '116 ': 'P', '117 ': 'C'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGATGTGTAGCGTCC-1_contig_1 | GCATGTCCCTCCCAGCTGCCCTACCTTCCAGAGCCCATATCAATGCCTGGGTCAGAGCTCTGGGGAGGAACTGCTCAGTTAGGACCCAGACGGAACCATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACTGGAGAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCTTTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-15*01 | null | IGKJ1*01 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCTTTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCNNTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWLWTFGQGTKVEIK | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWXWTFGQGTKVEIK | 1 | 283 | null | null | 286 | 322 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNW | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNW | null | null | null | null | TGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | TGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVMTQSPATLSVSPGERATLSCRAS | CAGAGTGTTAGCAGCAAC | QSVSSN | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | ACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGT | TRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAGTATAATAACTGGCTTTGGACG | QQYNNWLWT | TGTCAGCAGTATAATAACTGGCTTTGGACGTTC | 33.0 | CQQYNNWLWTF | 11.0 | 442.782 | null | 71.827 | 157S283M175S4N | null | 442S1N37M136S | 3.6699999999999995e-126 | null | 1.432e-16 | 100.0 | null | 100.0 | 158 | 440 | 1 | 283 | null | null | null | null | 443 | 479 | 2 | 38 | 158 | 235 | 236 | 253 | 254 | 304 | 305 | 313 | 314 | 421 | 449.0 | 478.0 | 422.0 | 448.0 | TT | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'N'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'N', '114 ': 'W', '115 ': 'L', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGATGTGTCTCTTTA-1_contig_2 | TGGGGAGTGACTCCTGTGCCCCACCATGGACACACTTTGCTCCACGCTCCTGCTGCTGACCATCCCTTCATGGGTCTTGTCCCAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAGGAGCTATGATAGTAGTGGTTATTACTCCTTTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV2-5*02 | IGHD3-22*01 | IGHJ4*02 | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAGGAGCTATGATAGTAGTGGTTATTACTCCTTTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAGNNNCTATGATAGTAGTGGTTATTACTNNNNNTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAHRSYDSSGYYSFYFDYWGQGTLVTVSS | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAHXXYDSSGYYXXYFDYWGQGTLVTVSS | 1 | 299 | 303.0 | 325.0 | 331 | 376 | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAG | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAH | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAG | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAH | CTATGATAGTAGTGGTTATTACT | YDSSGYY | CTATGATAGTAGTGGTTATTACT | YDSSGYY | TACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | TACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCT | QITLKESGPTLVKPTQTLTLTCTFS | GGGTTCTCACTCAGCACTAGTGGAGTGGGT | GFSLSTSGVG | GTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTC | VGWIRQPPGKALEWLAL | ATTTATTGGGATGATGATAAG | IYWDDDK | CGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGT | RYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCACACAGGAGCTATGATAGTAGTGGTTATTACTCCTTTTACTTTGACTAC | AHRSYDSSGYYSFYFDY | TGTGCACACAGGAGCTATGATAGTAGTGGTTATTACTCCTTTTACTTTGACTACTGG | 57.0 | CAHRSYDSSGYYSFYFDYW | 19.0 | 467.712 | 44.909 | 89.131 | 82S299M148S2N | 384S6N23M122S2N | 412S2N46M71S | 9.856e-134 | 7.163e-09 | 7.589e-22 | 100.0 | 100.0 | 100.0 | 83 | 381 | 1 | 299 | 385.0 | 407.0 | 7.0 | 29.0 | 413 | 458 | 3 | 48 | 83 | 157 | 158 | 187 | 188 | 238 | 239 | 259 | 260 | 373 | 425.0 | 457.0 | 374.0 | 424.0 | GAG | 3 | CCTTT | 5.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'I', '3 ': 'T', '4 ': 'L', '5 ': 'K', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'T', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'T', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'T', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'F', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'S', '30 ': 'L', '31 ': 'S', '34 ': 'T', '35 ': 'S', '36 ': 'G', '37 ': 'V', '38 ': 'G'}, 'fwh2': {'39 ': 'V', '40 ': 'G', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'L', '54 ': 'A', '55 ': 'L'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'W', '59 ': 'D', '63 ': 'D', '64 ': 'D', '65 ': 'K'}, 'fwh3': {'66 ': 'R', '67 ': 'Y', '68 ': 'S', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'L', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'K', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'V', '88 ': 'V', '89 ': 'L', '90 ': 'T', '91 ': 'M', '92 ': 'T', '93 ': 'N', '94 ': 'M', '95 ': 'D', '96 ': 'P', '97 ': 'V', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'H', '107 ': 'R', '108 ': 'S', '109 ': 'Y', '110 ': 'D', '111 ': 'S', '111A': 'S', '111B': 'G', '112B': 'Y', '112A': 'Y', '112 ': 'S', '113 ': 'F', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGATGTGTCTCTTTA-1_contig_1 | AGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTTCCAGATGCGACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCTGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-12*01 | null | IGKJ5*01 | GACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCTGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | GACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCNGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFLITFGQGTRLEIK | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFXITFGQGTRLEIK | 1 | 283 | null | null | 285 | 322 | GACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCC | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSF | GACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCC | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSF | null | null | null | null | GATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | GATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | GACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGT | DIQMTQSPSSVSASVGDRVTITCRAS | CAGGGTATTAGCAGCTGG | QGISSW | TTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCCAAGGGACACGACTGGAGATTAAA | FGQGTRLEIK | CAACAGGCTAACAGTTTCCTGATCACC | QQANSFLIT | TGTCAACAGGCTAACAGTTTCCTGATCACCTTC | 33.0 | CQQANSFLITF | 11.0 | 442.782 | null | 73.749 | 93S283M175S4N | null | 377S38M136S | 3.288e-126 | null | 3.377e-17 | 100.0 | null | 100.0 | 94 | 376 | 1 | 283 | null | null | null | null | 378 | 415 | 1 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 385.0 | 414.0 | 358.0 | 384.0 | T | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'W'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'A', '108 ': 'N', '109 ': 'S', '114 ': 'F', '115 ': 'L', '116 ': 'I', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'R', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGATGTGTGCAGGTA-1_contig_1 | GGGATCACACAACAGCCACATCCCTCCCCTACAGAAGCCCCCAGAGCGCAGCACCTCACCATGGACTGCACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCTACAGGCACCCACGCCCAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCAACAGAGAACGTGGATATAGTGGCTACGATTGCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-24*01 | IGHD5-12*01 | IGHJ4*02 | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCAACAGAGAACGTGGATATAGTGGCTACGATTGCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCAACAGANNNNGTGGATATAGTGGCTACGATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCATENVDIVATIAYWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCATXXVDIVATIDYWGQGTLVTVSS | 1 | 296 | 301.0 | 319.0 | 320 | 361 | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCAACAGA | QVQLVQSGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCAT | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCAACAGA | QVQLVQSGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCAT | GTGGATATAGTGGCTACGA | VDIVAT | GTGGATATAGTGGCTACGA | VDIVAT | TTGCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | AYWGQGTLVTVSS | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCC | QVQLVQSGAEVKKPGASVKVSCKVS | GGATACACCCTCACTGAATTATCC | GYTLTELS | ATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGT | MHWVRQAPGKGLEWMGG | TTTGATCCTGAAGATGGTGAAACA | FDPEDGET | ATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | IYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCAACAGAGAACGTGGATATAGTGGCTACGATTGCCTAC | ATENVDIVATIAY | TGTGCAACAGAGAACGTGGATATAGTGGCTACGATTGCCTACTGG | 45.0 | CATENVDIVATIAYW | 15.0 | 463.037 | 37.218 | 75.672 | 117S296M136S | 417S19M113S4N | 436S6N42M71S | 2.617e-132 | 1.537e-06 | 8.874e-18 | 100.0 | 100.0 | 97.619 | 118 | 413 | 1 | 296 | 418.0 | 436.0 | 1.0 | 19.0 | 437 | 478 | 7 | 48 | 118 | 192 | 193 | 216 | 217 | 267 | 268 | 291 | 292 | 405 | 445.0 | 477.0 | 406.0 | 444.0 | GAAC | 4 | null | 0.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'L', '35 ': 'T', '36 ': 'E', '37 ': 'L', '38 ': 'S'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'G'}, 'cdrh2': {'56 ': 'F', '57 ': 'D', '58 ': 'P', '59 ': 'E', '62 ': 'D', '63 ': 'G', '64 ': 'E', '65 ': 'T'}, 'fwh3': {'66 ': 'I', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'E', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'T', '85 ': 'D', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'T', '107 ': 'E', '108 ': 'N', '109 ': 'V', '110 ': 'D', '111 ': 'I', '112 ': 'V', '113 ': 'A', '114 ': 'T', '115 ': 'I', '116 ': 'A', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGATGTGTGCAGGTA-1_contig_2 | AGAGCTCTGGAGAAGAGCTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACTCTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-20*01 | null | IGKJ2*01 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACTCTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACNNTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSLYTFGQGTKLEIK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSXYTFGQGTKLEIK | 1 | 286 | null | null | 289 | 325 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSS | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSS | null | null | null | null | TACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | TACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPGTLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCAGCTAC | QSVSSSY | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAGCAGTATGGTAGCTCACTCTACACT | QQYGSSLYT | TGTCAGCAGTATGGTAGCTCACTCTACACTTTT | 33.0 | CQQYGSSLYTF | 11.0 | 447.456 | null | 71.827 | 104S286M175S4N | null | 392S2N37M136S | 1.322e-127 | null | 1.314e-16 | 100.0 | null | 100.0 | 105 | 390 | 1 | 286 | null | null | null | null | 393 | 429 | 3 | 39 | 105 | 182 | 183 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 399.0 | 428.0 | 372.0 | 398.0 | TC | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'G', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'G', '109 ': 'S', '114 ': 'S', '115 ': 'L', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGATGTGTGCATCTA-1_contig_2 | GGGGAGCTCTGGGAGAGGAGCCCCAGCCCTGAGATTCCCAGGTGTTTCCATTCAGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTGGGACTGAGCTGGATTTTCCTTTTGGCTATTTTAAAAGGTGTCCAGTGTGAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGGATTAAGTCCAGGCTCACCATACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-9*01 | IGHD3-16*01 | IGHJ4*02 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGGATTAAGTCCAGGCTCACCATACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGGATTANNNNNNNNNNNNNNNNACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKGLSPGSPYYFDYWGQGTLVTVSS | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKGLXXXXXXYFDYWGQGTLVTVSS | 1 | 295 | 296.0 | 300.0 | 317 | 364 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAG | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAK | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAG | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAK | GATTA | L | GATTA | L | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGRSLRLSCAAS | GGATTCACCTTTGATGATTATGCC | GFTFDDYA | ATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGT | MHWVRQAPGKGLEWVSG | ATTAGTTGGAATAGTGGTAGCATA | ISWNSGSI | GGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGT | GYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCAAAAGGATTAAGTCCAGGCTCACCATACTACTTTGACTAC | AKGLSPGSPYYFDY | TGTGCAAAAGGATTAAGTCCAGGCTCACCATACTACTTTGACTACTGG | 48.0 | CAKGLSPGSPYYFDYW | 16.0 | 461.479 | 10.301 | 92.976 | 141S295M140S3N | 436S7N5M135S25N | 457S48M71S | 8.06e-132 | 204.6 | 5.758999999999999e-23 | 100.0 | 100.0 | 100.0 | 142 | 436 | 1 | 295 | 437.0 | 441.0 | 8.0 | 12.0 | 458 | 505 | 1 | 48 | 142 | 216 | 217 | 240 | 241 | 291 | 292 | 315 | 316 | 429 | 472.0 | 504.0 | 430.0 | 471.0 | null | 0 | AGTCCAGGCTCACCAT | 16.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'D', '36 ': 'D', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'G'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'W', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'I'}, 'fwh3': {'66 ': 'G', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'L', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'G', '108 ': 'L', '109 ': 'S', '110 ': 'P', '111 ': 'G', '112A': 'S', '112 ': 'P', '113 ': 'Y', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGATGTGTGCATCTA-1_contig_1 | AGCTGTGGGCTCAGAAGCAGAGTTCTGGGGTGTCTCCACCATGGCCTGGACCCCTCTCTGGCTCACTCTCCTCACTCTTTGCATAGGTTCTGTGGTTTCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGACAGCCTCAGAAGCTATTATGCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTATGGTAAAAACAACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGTAACTCCCGGGACAGCAGTGGTAACCATCCCTATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-19*01 | null | IGLJ2*01 | TCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGACAGCCTCAGAAGCTATTATGCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTATGGTAAAAACAACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGTAACTCCCGGGACAGCAGTGGTAACCATCCCTATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGACAGCCTCAGAAGCTATTATGCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTATGGTAAAAACAACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGTAACTCCCGGGACAGCAGTGGTAACCATCNNNNTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SSELTQDPAVSVALGQTVRITCQGDSLRSYYASWYQQKPGQAPVLVIYGKNNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDSSGNHPYVVFGGGTKLTVL | SSELTQDPAVSVALGQTVRITCQGDSLRSYYASWYQQKPGQAPVLVIYGKNNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDSSGNHXXVVFGGGTKLTVL | 1 | 289 | null | null | 294 | 331 | TCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGACAGCCTCAGAAGCTATTATGCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTATGGTAAAAACAACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGTAACTCCCGGGACAGCAGTGGTAACCATC | SSELTQDPAVSVALGQTVRITCQGDSLRSYYASWYQQKPGQAPVLVIYGKNNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDSSGNH | TCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGACAGCCTCAGAAGCTATTATGCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTATGGTAAAAACAACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGTAACTCCCGGGACAGCAGTGGTAACCATC | SSELTQDPAVSVALGQTVRITCQGDSLRSYYASWYQQKPGQAPVLVIYGKNNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDSSGNH | null | null | null | null | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGAC | SSELTQDPAVSVALGQTVRITCQGD | AGCCTCAGAAGCTATTAT | SLRSYY | GCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTAT | ASWYQQKPGQAPVLVIY | GGTAAAAAC | GKN | AACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGT | NRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | AACTCCCGGGACAGCAGTGGTAACCATCCCTATGTGGTA | NSRDSSGNHPYVV | TGTAACTCCCGGGACAGCAGTGGTAACCATCCCTATGTGGTATTC | 45.0 | CNSRDSSGNHPYVVF | 15.0 | 452.13 | null | 73.749 | 97S289M253S1N | null | 390S38M211S | 5.86e-129 | null | 3.927e-17 | 100.0 | null | 100.0 | 98 | 386 | 1 | 289 | null | null | null | null | 391 | 428 | 1 | 38 | 98 | 172 | 173 | 190 | 191 | 241 | 242 | 250 | 251 | 358 | 398.0 | 427.0 | 359.0 | 397.0 | CCTA | 4 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'S', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'D', '8 ': 'P', '9 ': 'A', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'A', '15 ': 'L', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'V', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'Q', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'S', '28 ': 'L', '29 ': 'R', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'G', '57 ': 'K', '65 ': 'N'}, 'fwl3': {'66 ': 'N', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'S', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'T', '93 ': 'G', '94 ': 'A', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'N', '106 ': 'S', '107 ': 'R', '108 ': 'D', '109 ': 'S', '110 ': 'S', '111 ': 'G', '112 ': 'N', '113 ': 'H', '114 ': 'P', '115 ': 'Y', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGATGTGTGTGCGTC-1_contig_2 | GAGCTCTGGGAGAGGAGCCCAGCACTAGAAGTCGGCGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGGGGGCGCGATTTTTGGAGTGGAAATCGAAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-33*01 | IGHD3-3*01 | IGHJ6*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGGGGGCGCGATTTTTGGAGTGGAAATCGAAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGNNNNNNCGATTTTTGGAGTGGNNNNNNNNATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGGAIFGVEIEMDVWGQGTTVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXXXIFGVXXXMDVWGQGTTVTVSS | 1 | 295 | 302.0 | 316.0 | 325 | 366 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | CGATTTTTGGAGTGG | IFGV | CGATTTTTGGAGTGG | IFGV | ATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | MDVWGQGTTVTVSS | ATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | MDVWGQGTTVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGGC | GFTFSSYG | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATGGTATGATGGAAGTAATAAA | IWYDGSNK | TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGGGGGCGCGATTTTTGGAGTGGAAATCGAAATGGACGTC | ARGGAIFGVEIEMDV | TGTGCGAGAGGGGGCGCGATTTTTGGAGTGGAAATCGAAATGGACGTCTGG | 51.0 | CARGGAIFGVEIEMDVW | 17.0 | 461.479 | 29.528 | 81.44 | 137S295M143S1N | 438S6N15M122S10N | 461S20N42M72S | 8.045000000000001e-132 | 0.0003329 | 1.707e-19 | 100.0 | 100.0 | 100.0 | 138 | 432 | 1 | 295 | 439.0 | 453.0 | 7.0 | 21.0 | 462 | 503 | 21 | 62 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 471.0 | 503.0 | 426.0 | 470.0 | GGGGCG | 6 | AAATCGAA | 8.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'W', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'G', '109 ': 'A', '110 ': 'I', '111 ': 'F', '111A': 'G', '112A': 'V', '112 ': 'E', '113 ': 'I', '114 ': 'E', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGATGTGTGTGCGTC-1_contig_1 | AGCTTCAGCTGTGGGTAGAGAAGACAGGACTCAGGACAATCTCCAGCATGGCCAGCTTCCCTCTCCTCCTCACCCTCCTCACTCACTGTGCAGGGTCCTGGGCCCAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTTTTTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAGGTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-44*01 | null | IGLJ1*01 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTTTTTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTNNTTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGFYVFGTGTKVTVL | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGXYVFGTGTKVTVL | 1 | 294 | null | null | 297 | 334 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGT | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGT | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNG | null | null | null | null | TTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | YVFGTGTKVTVL | TTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | YVFGTGTKVTVL | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGC | QSVLTQPPSASGTPGQRVTISCSGS | AGCTCCAACATCGGAAGTAATACT | SSNIGSNT | GTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTAT | VNWYQQLPGTAPKLLIY | AGTAATAAT | SNN | CAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGT | QRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYC | TTCGGAACTGGGACCAAGGTCACCGTCCTA | FGTGTKVTVL | GCAGCATGGGATGACAGCCTGAATGGTTTTTATGTC | AAWDDSLNGFYV | TGTGCAGCATGGGATGACAGCCTGAATGGTTTTTATGTCTTC | 42.0 | CAAWDDSLNGFYVF | 14.0 | 459.921 | null | 73.749 | 104S294M251S2N | null | 400S38M211S | 2.6900000000000004e-131 | null | 3.99e-17 | 100.0 | null | 100.0 | 105 | 398 | 1 | 294 | null | null | null | null | 401 | 438 | 1 | 38 | 105 | 179 | 180 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 408.0 | 437.0 | 372.0 | 407.0 | TT | 2 | null | null | GTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'A', '12 ': 'S', '13 ': 'G', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'S', '37 ': 'N', '38 ': 'T'}, 'fwl2': {'39 ': 'V', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'S', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'Q', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'A', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'A', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'D', '110 ': 'S', '112 ': 'L', '113 ': 'N', '114 ': 'G', '115 ': 'F', '116 ': 'Y', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'T', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGATGTTCACGGTTA-1_contig_1 | GGGGCTTTCTGAGAGTCATGGATCTCATGTGCAAGAAAATGAAGCACCTGTGGTTCTTCCTCCTGCTGGTGGCGGCTCCCAGATGGGTCCTGTCCCAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACGCCCGTGGGGTGGATTATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-39*01 | IGHD5-12*01 | IGHJ4*02 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACGCCCGTGGGGTGGATTATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACNNNNNNNNNGTGGATNNTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARRPWGGLFDYWGQGTLVTVSS | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXXXGXFDYWGQGTLVTVSS | 1 | 298 | 308.0 | 313.0 | 316 | 358 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGAC | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGAC | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | GTGGAT | G | GTGGAT | G | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QLQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGCAGTAGTAGTTACTAC | GGSISSSSYY | TGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGT | WGWIRQPPGKGLEWIGS | ATCTATTATAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGACGCCCGTGGGGTGGATTATTTGACTAC | ARRPWGGLFDY | TGTGCGAGACGCCCGTGGGGTGGATTATTTGACTACTGG | 39.0 | CARRPWGGLFDYW | 13.0 | 466.153 | 12.223 | 83.363 | 95S298M131S1N | 402S6M116S17N | 410S5N43M71S | 2.873e-133 | 49.01 | 4.0960000000000004e-20 | 100.0 | 100.0 | 100.0 | 96 | 393 | 1 | 298 | 403.0 | 408.0 | 1.0 | 6.0 | 411 | 453 | 6 | 48 | 96 | 170 | 171 | 200 | 201 | 251 | 252 | 272 | 273 | 386 | 420.0 | 452.0 | 387.0 | 419.0 | GCCCGTGGG | 9 | TA | 2.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'L', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'G', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'R', '108 ': 'P', '109 ': 'W', '110 ': 'G', '113 ': 'G', '114 ': 'L', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGATGTTCACGGTTA-1_contig_2 | TCTGAGGATACGCGTGACAGATAAGAAGGGCTGGTGGGATCAGTCCTGGTGGTAGCTCAGGAAGCAGAGCCTGGAGCATCTCCACTATGGCCTGGGCTCCACTACTTCTCACCCTCCTCGCTCACTGCACAGGTTCTTGGGCCAATTTTATGCTGACTCAGCCCCACTCTGTGTCGGAGTCTCCGGGGAAGACGGTAACCATCTCCTGCACCGGCAGCAGTGGCAGCATTGCCAGCAACTATGTGCAGTGGTACCAGCAGCGCCCGGGCAGTGCCCCCACCACTGTGATCTATGAGGATAACCAAAGACCCTCTGGGGTCCCTGATCGGTTCTCTGGCTCCATCGACAGCTCCTCCAACTCTGCCTCCCTCACCATCTCTGGACTGAAGACTGAGGACGAGGCTGACTACTACTGTCAGTCTTATGATAGCAGCAATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV6-57*02 | null | IGLJ2*01 | AATTTTATGCTGACTCAGCCCCACTCTGTGTCGGAGTCTCCGGGGAAGACGGTAACCATCTCCTGCACCGGCAGCAGTGGCAGCATTGCCAGCAACTATGTGCAGTGGTACCAGCAGCGCCCGGGCAGTGCCCCCACCACTGTGATCTATGAGGATAACCAAAGACCCTCTGGGGTCCCTGATCGGTTCTCTGGCTCCATCGACAGCTCCTCCAACTCTGCCTCCCTCACCATCTCTGGACTGAAGACTGAGGACGAGGCTGACTACTACTGTCAGTCTTATGATAGCAGCAATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | AATTTTATGCTGACTCAGCCCCACTCTGTGTCGGAGTCTCCGGGGAAGACGGTAACCATCTCCTGCACCGGCAGCAGTGGCAGCATTGCCAGCAACTATGTGCAGTGGTACCAGCAGCGCCCGGGCAGTGCCCCCACCACTGTGATCTATGAGGATAACCAAAGACCCTCTGGGGTCCCTGATCGGTTCTCTGGCTCCATCGACAGCTCCTCCAACTCTGCCTCCCTCACCATCTCTGGACTGAAGACTGAGGACGAGGCTGACTACTACTGTCAGTCTTATGATAGCAGCAATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | NFMLTQPHSVSESPGKTVTISCTGSSGSIASNYVQWYQQRPGSAPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDSSNVVFGGGTKLTVL | NFMLTQPHSVSESPGKTVTISCTGSSGSIASNYVQWYQQRPGSAPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDSSNVVFGGGTKLTVL | 1 | 294 | null | null | 295 | 331 | AATTTTATGCTGACTCAGCCCCACTCTGTGTCGGAGTCTCCGGGGAAGACGGTAACCATCTCCTGCACCGGCAGCAGTGGCAGCATTGCCAGCAACTATGTGCAGTGGTACCAGCAGCGCCCGGGCAGTGCCCCCACCACTGTGATCTATGAGGATAACCAAAGACCCTCTGGGGTCCCTGATCGGTTCTCTGGCTCCATCGACAGCTCCTCCAACTCTGCCTCCCTCACCATCTCTGGACTGAAGACTGAGGACGAGGCTGACTACTACTGTCAGTCTTATGATAGCAGCAAT | NFMLTQPHSVSESPGKTVTISCTGSSGSIASNYVQWYQQRPGSAPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDSSN | AATTTTATGCTGACTCAGCCCCACTCTGTGTCGGAGTCTCCGGGGAAGACGGTAACCATCTCCTGCACCGGCAGCAGTGGCAGCATTGCCAGCAACTATGTGCAGTGGTACCAGCAGCGCCCGGGCAGTGCCCCCACCACTGTGATCTATGAGGATAACCAAAGACCCTCTGGGGTCCCTGATCGGTTCTCTGGCTCCATCGACAGCTCCTCCAACTCTGCCTCCCTCACCATCTCTGGACTGAAGACTGAGGACGAGGCTGACTACTACTGTCAGTCTTATGATAGCAGCAAT | NFMLTQPHSVSESPGKTVTISCTGSSGSIASNYVQWYQQRPGSAPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDSSN | null | null | null | null | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | AATTTTATGCTGACTCAGCCCCACTCTGTGTCGGAGTCTCCGGGGAAGACGGTAACCATCTCCTGCACCGGCAGC | NFMLTQPHSVSESPGKTVTISCTGS | AGTGGCAGCATTGCCAGCAACTAT | SGSIASNY | GTGCAGTGGTACCAGCAGCGCCCGGGCAGTGCCCCCACCACTGTGATCTAT | VQWYQQRPGSAPTTVIY | GAGGATAAC | EDN | CAAAGACCCTCTGGGGTCCCTGATCGGTTCTCTGGCTCCATCGACAGCTCCTCCAACTCTGCCTCCCTCACCATCTCTGGACTGAAGACTGAGGACGAGGCTGACTACTACTGT | QRPSGVPDRFSGSIDSSSNSASLTISGLKTEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGTCTTATGATAGCAGCAATGTGGTA | QSYDSSNVV | TGTCAGTCTTATGATAGCAGCAATGTGGTATTC | 33.0 | CQSYDSSNVVF | 11.0 | 459.921 | null | 71.827 | 143S294M248S2N | null | 437S1N37M211S | 2.846e-131 | null | 1.598e-16 | 100.0 | null | 100.0 | 144 | 437 | 1 | 294 | null | null | null | null | 438 | 474 | 2 | 38 | 144 | 218 | 219 | 242 | 243 | 293 | 294 | 302 | 303 | 416 | 444.0 | 473.0 | 417.0 | 443.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'N', '2 ': 'F', '3 ': 'M', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'H', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'E', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'K', '18 ': 'T', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'G', '29 ': 'S', '30 ': 'I', '35 ': 'A', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'Q', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'R', '46 ': 'P', '47 ': 'G', '48 ': 'S', '49 ': 'A', '50 ': 'P', '51 ': 'T', '52 ': 'T', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'D', '65 ': 'N'}, 'fwl3': {'66 ': 'Q', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'I', '81 ': 'D', '82 ': 'S', '83 ': 'S', '84 ': 'S', '85 ': 'N', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'S', '107 ': 'Y', '108 ': 'D', '109 ': 'S', '114 ': 'S', '115 ': 'N', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGATGTTCGCAGGCT-1_contig_1 | AGCTCTGGGAGAGGAGCCCCAGCCTTGGGATTCCCAAGTGTTTTCATTCAGTGATCAGGACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGATTTTCCTTGCTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGATTTCGGGGAGCCGACTACGGTGACTATGTTCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGCACCCACCAAGGCTCCGGATGTGTTCCCCATCATATCAGGGTGCAGACACCCAAAGGATAACAGCCCTGTGGTCCTGGCATGCTTGATAACTGGGTACCACC | H | F | T | F | T | F | T | IGHV3-15*01 | IGHD4-17*01 | IGHJ6*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGATTTCGGGGAGCCGACTACGGTGACTATGTTCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGANNNNNNNNNNNNGACTACGGTGACTANNNNCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTDFGEPTTVTMFYYGMDVWGQGTTVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTXXXXXTTVTXXYYGMDVWGQGTTVTVSS | 1 | 302 | 315.0 | 328.0 | 333 | 384 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | GACTACGGTGACTA | TTVT | GACTACGGTGACTA | TTVT | CTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYGMDVWGQGTTVTVSS | CTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYGMDVWGQGTTVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACTTTCAGTAACGCCTGG | GFTFSNAW | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGT | MSWVRQAPGKGLEWVGR | ATTAAAAGCAAAACTGATGGTGGGACAACA | IKSKTDGGTT | GACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGT | DYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | ACCACAGATTTCGGGGAGCCGACTACGGTGACTATGTTCTACTACGGTATGGACGTC | TTDFGEPTTVTMFYYGMDV | TGTACCACAGATTTCGGGGAGCCGACTACGGTGACTATGTTCTACTACGGTATGGACGTCTGG | 63.0 | CTTDFGEPTTVTMFYYGMDVW | 21.0 | 472.386 | 27.605 | 100.667 | 137S302M185S | 451S1N14M159S1N | 469S10N52M103S | 4.567e-135 | 0.001372 | 3.024e-25 | 100.0 | 100.0 | 100.0 | 138 | 439 | 1 | 302 | 452.0 | 465.0 | 2.0 | 15.0 | 470 | 521 | 11 | 62 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 317 | 318 | 431 | 489.0 | 521.0 | 432.0 | 488.0 | TTTCGGGGAGCC | 12 | TGTT | 4.0 | GCACCCACCAAGGCTCCGGATGTGTTCCCCATCATATCAGGGTGCAGACACCCAAAGGATAACAGCCCTGTGGTCCTGGCATGCTTGATAACTGGGTACCACC | IGHD | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'N', '37 ': 'A', '38 ': 'W'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'K', '58 ': 'S', '59 ': 'K', '60 ': 'T', '61 ': 'D', '62 ': 'G', '63 ': 'G', '64 ': 'T', '65 ': 'T'}, 'fwh3': {'66 ': 'D', '67 ': 'Y', '68 ': 'A', '69 ': 'A', '70 ': 'P', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'D', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'T', '106 ': 'T', '107 ': 'D', '108 ': 'F', '109 ': 'G', '110 ': 'E', '111 ': 'P', '111A': 'T', '111B': 'T', '111C': 'V', '112C': 'T', '112B': 'M', '112A': 'F', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGATGTTCGCAGGCT-1_contig_2 | GGTAGCTCAGGAAGCAGAGCCTGGAGCATCTCCACTATGGCCTGGGCTCCACTACTTCTCACCCTCCTCGCTCACTGCACAGGTTCTTGGGCCAATTTTATGCTGACTCAGCCCCACTCTGTGTCGGAGTCTCCGGGGAAGACGGTAACCATCTCCTGCACCGGCAGCAGTGGCAGCATTGCCAGCAACTATGTGCAGTGGTACCAGCAGCGCCCGGGCAGTGCCCCCACCACTGTGATCTATGAGGATAACCAAAGACCCTCTGGGGTCCCTGATCGGTTCTCTGGCTCCATCGACAGCTCCTCCAACTCTGCCTCCCTCACCATCTCTGGACTGAAGACTGAGGACGAGGCTGACTACTACTGTCAGTCTTATGATAGCAGCAACAGTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV6-57*02 | null | IGLJ3*02 | AATTTTATGCTGACTCAGCCCCACTCTGTGTCGGAGTCTCCGGGGAAGACGGTAACCATCTCCTGCACCGGCAGCAGTGGCAGCATTGCCAGCAACTATGTGCAGTGGTACCAGCAGCGCCCGGGCAGTGCCCCCACCACTGTGATCTATGAGGATAACCAAAGACCCTCTGGGGTCCCTGATCGGTTCTCTGGCTCCATCGACAGCTCCTCCAACTCTGCCTCCCTCACCATCTCTGGACTGAAGACTGAGGACGAGGCTGACTACTACTGTCAGTCTTATGATAGCAGCAACAGTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | AATTTTATGCTGACTCAGCCCCACTCTGTGTCGGAGTCTCCGGGGAAGACGGTAACCATCTCCTGCACCGGCAGCAGTGGCAGCATTGCCAGCAACTATGTGCAGTGGTACCAGCAGCGCCCGGGCAGTGCCCCCACCACTGTGATCTATGAGGATAACCAAAGACCCTCTGGGGTCCCTGATCGGTTCTCTGGCTCCATCGACAGCTCCTCCAACTCTGCCTCCCTCACCATCTCTGGACTGAAGACTGAGGACGAGGCTGACTACTACTGTCAGTCTTATGATAGCAGCAANNNTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | NFMLTQPHSVSESPGKTVTISCTGSSGSIASNYVQWYQQRPGSAPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDSSNSWVFGGGTKLTVL | NFMLTQPHSVSESPGKTVTISCTGSSGSIASNYVQWYQQRPGSAPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDSSXXWVFGGGTKLTVL | 1 | 293 | null | null | 297 | 334 | AATTTTATGCTGACTCAGCCCCACTCTGTGTCGGAGTCTCCGGGGAAGACGGTAACCATCTCCTGCACCGGCAGCAGTGGCAGCATTGCCAGCAACTATGTGCAGTGGTACCAGCAGCGCCCGGGCAGTGCCCCCACCACTGTGATCTATGAGGATAACCAAAGACCCTCTGGGGTCCCTGATCGGTTCTCTGGCTCCATCGACAGCTCCTCCAACTCTGCCTCCCTCACCATCTCTGGACTGAAGACTGAGGACGAGGCTGACTACTACTGTCAGTCTTATGATAGCAGCAA | NFMLTQPHSVSESPGKTVTISCTGSSGSIASNYVQWYQQRPGSAPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDSS | AATTTTATGCTGACTCAGCCCCACTCTGTGTCGGAGTCTCCGGGGAAGACGGTAACCATCTCCTGCACCGGCAGCAGTGGCAGCATTGCCAGCAACTATGTGCAGTGGTACCAGCAGCGCCCGGGCAGTGCCCCCACCACTGTGATCTATGAGGATAACCAAAGACCCTCTGGGGTCCCTGATCGGTTCTCTGGCTCCATCGACAGCTCCTCCAACTCTGCCTCCCTCACCATCTCTGGACTGAAGACTGAGGACGAGGCTGACTACTACTGTCAGTCTTATGATAGCAGCAA | NFMLTQPHSVSESPGKTVTISCTGSSGSIASNYVQWYQQRPGSAPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDSS | null | null | null | null | TTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | TTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | AATTTTATGCTGACTCAGCCCCACTCTGTGTCGGAGTCTCCGGGGAAGACGGTAACCATCTCCTGCACCGGCAGC | NFMLTQPHSVSESPGKTVTISCTGS | AGTGGCAGCATTGCCAGCAACTAT | SGSIASNY | GTGCAGTGGTACCAGCAGCGCCCGGGCAGTGCCCCCACCACTGTGATCTAT | VQWYQQRPGSAPTTVIY | GAGGATAAC | EDN | CAAAGACCCTCTGGGGTCCCTGATCGGTTCTCTGGCTCCATCGACAGCTCCTCCAACTCTGCCTCCCTCACCATCTCTGGACTGAAGACTGAGGACGAGGCTGACTACTACTGT | QRPSGVPDRFSGSIDSSSNSASLTISGLKTEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGTCTTATGATAGCAGCAACAGTTGGGTG | QSYDSSNSWV | TGTCAGTCTTATGATAGCAGCAACAGTTGGGTGTTC | 36.0 | CQSYDSSNSWVF | 12.0 | 458.363 | null | 73.749 | 93S293M252S3N | null | 389S38M211S | 7.781000000000005e-131 | null | 3.921e-17 | 100.0 | null | 100.0 | 94 | 386 | 1 | 293 | null | null | null | null | 390 | 427 | 1 | 38 | 94 | 168 | 169 | 192 | 193 | 243 | 244 | 252 | 253 | 366 | 397.0 | 426.0 | 367.0 | 396.0 | CAG | 3 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'N', '2 ': 'F', '3 ': 'M', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'H', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'E', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'K', '18 ': 'T', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'G', '29 ': 'S', '30 ': 'I', '35 ': 'A', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'Q', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'R', '46 ': 'P', '47 ': 'G', '48 ': 'S', '49 ': 'A', '50 ': 'P', '51 ': 'T', '52 ': 'T', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'D', '65 ': 'N'}, 'fwl3': {'66 ': 'Q', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'I', '81 ': 'D', '82 ': 'S', '83 ': 'S', '84 ': 'S', '85 ': 'N', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'S', '107 ': 'Y', '108 ': 'D', '109 ': 'S', '113 ': 'S', '114 ': 'N', '115 ': 'S', '116 ': 'W', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGATGTTCGGTTAAC-1_contig_2 | GGGAGCATCACCCAGCAACCACATCTGTCCTCTAGAGAATCCCCTGAGAGCTCCGTTCCTCACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCCACAGGAGCCCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTTAAAGTCTCCTGCAAGGCTTCTGGATACAGCTTCACCGGCTACAATATACACTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGACGGATCAACCCTAACATTAGTGGCACAAACTATGGAAAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGTACAGCCTACATGGAGCTGAGCAGGCTGACATCTGACGACTCGGCCGTGTATTTCTGTGCGAGAGCAAGCGCCCTCATACCTGGGACTCCTATATTTTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-2*06 | IGHD3-9*01 | IGHJ4*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTTAAAGTCTCCTGCAAGGCTTCTGGATACAGCTTCACCGGCTACAATATACACTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGACGGATCAACCCTAACATTAGTGGCACAAACTATGGAAAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGTACAGCCTACATGGAGCTGAGCAGGCTGACATCTGACGACTCGGCCGTGTATTTCTGTGCGAGAGCAAGCGCCCTCATACCTGGGACTCCTATATTTTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNATATTTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYSFTGYNIHWVRQAPGQGLEWMGRINPNISGTNYGKKFQGRVTMTRDTSISTAYMELSRLTSDDSAVYFCARASALIPGTPIFFDSWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARXXXXXXXXXIFFDYWGQGTLVTVSS | 1 | 295 | 322.0 | 327.0 | 328 | 370 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTTAAAGTCTCCTGCAAGGCTTCTGGATACAGCTTCACCGGCTACAATATACACTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGACGGATCAACCCTAACATTAGTGGCACAAACTATGGAAAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGTACAGCCTACATGGAGCTGAGCAGGCTGACATCTGACGACTCGGCCGTGTATTTCTGTGCGAGAG | QVQLVQSGAEVKKPGASVKVSCKASGYSFTGYNIHWVRQAPGQGLEWMGRINPNISGTNYGKKFQGRVTMTRDTSISTAYMELSRLTSDDSAVYFCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | ATATTT | IF | ATATTT | IF | TTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDSWGQGTLVTVSS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTTAAAGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACAGCTTCACCGGCTACAAT | GYSFTGYN | ATACACTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGACGG | IHWVRQAPGQGLEWMGR | ATCAACCCTAACATTAGTGGCACA | INPNISGT | AACTATGGAAAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGTACAGCCTACATGGAGCTGAGCAGGCTGACATCTGACGACTCGGCCGTGTATTTCTGT | NYGKKFQGRVTMTRDTSISTAYMELSRLTSDDSAVYFC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGCAAGCGCCCTCATACCTGGGACTCCTATATTTTTTGACTCC | ARASALIPGTPIFFDS | TGTGCGAGAGCAAGCGCCCTCATACCTGGGACTCCTATATTTTTTGACTCCTGG | 54.0 | CARASALIPGTPIFFDSW | 18.0 | 417.852 | 12.223 | 77.595 | 121S295M146S1N | 442S8N6M114S17N | 448S5N43M71S | 1.073e-118 | 52.63 | 2.397e-18 | 95.254 | 100.0 | 97.674 | 122 | 416 | 1 | 295 | 443.0 | 448.0 | 9.0 | 14.0 | 449 | 491 | 6 | 48 | 122 | 196 | 197 | 220 | 221 | 271 | 272 | 295 | 296 | 409 | 458.0 | 490.0 | 410.0 | 457.0 | CAAGCGCCCTCATACCTGGGACTCCT | 26 | null | 0.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'S', '30 ': 'F', '35 ': 'T', '36 ': 'G', '37 ': 'Y', '38 ': 'N'}, 'fwh2': {'39 ': 'I', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'P', '59 ': 'N', '62 ': 'I', '63 ': 'S', '64 ': 'G', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'G', '69 ': 'K', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'I', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'T', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'S', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'F', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'A', '108 ': 'S', '109 ': 'A', '110 ': 'L', '111 ': 'I', '111A': 'P', '112B': 'G', '112A': 'T', '112 ': 'P', '113 ': 'I', '114 ': 'F', '115 ': 'F', '116 ': 'D', '117 ': 'S'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGATGTTCGGTTAAC-1_contig_1 | TGGGGGAGTCAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAATCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAACAGCTATTTAAATTGGTTTCAGCAGAAACCAGGAAAAGCCCCTAAACTCCTGATCTATATGGCATCCAATTTACAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGTAACTTACTACTGTCAACAGATTTACATTACCCCGTACACTTTTGGCCAGGGGACCAACCTGGAGATCAGACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | F | IGKV1-39*01 | null | IGKJ2*01 | GACATCCAGATGACCCAATCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAACAGCTATTTAAATTGGTTTCAGCAGAAACCAGGAAAAGCCCCTAAACTCCTGATCTATATGGCATCCAATTTACAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGTAACTTACTACTGTCAACAGATTTACATTACCCCGTACACTTTTGGCCAGGGGACCAACCTGGAGATCA | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCA | DIQMTQSPSSLSASVGDRVTITCRASQSINSYLNWFQQKPGKAPKLLIYMASNLQSGVPSRFSGSGSGTDFTLTISSLQPEDFVTYYCQQIYITPYTFGQGTNLEI | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPYTFGQGTKLEI | 1 | 284 | null | null | 285 | 319 | GACATCCAGATGACCCAATCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAACAGCTATTTAAATTGGTTTCAGCAGAAACCAGGAAAAGCCCCTAAACTCCTGATCTATATGGCATCCAATTTACAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGTAACTTACTACTGTCAACAGATTTACATTACCCC | DIQMTQSPSSLSASVGDRVTITCRASQSINSYLNWFQQKPGKAPKLLIYMASNLQSGVPSRFSGSGSGTDFTLTISSLQPEDFVTYYCQQIYITP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | null | null | null | null | GTACACTTTTGGCCAGGGGACCAACCTGGAGATCA | YTFGQGTNLEI | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCA | YTFGQGTKLEI | GACATCCAGATGACCCAATCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAACAGCTAT | QSINSY | TTAAATTGGTTTCAGCAGAAACCAGGAAAAGCCCCTAAACTCCTGATCTAT | LNWFQQKPGKAPKLLIY | ATGGCATCC | MAS | AATTTACAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGTAACTTACTACTGT | NLQSGVPSRFSGSGSGTDFTLTISSLQPEDFVTYYC | TTTGGCCAGGGGACCAACCTGGAGATCA | FGQGTNLEI | CAACAGATTTACATTACCCCGTACACT | QQIYITPYT | TGTCAACAGATTTACATTACCCCGTACACTTTT | 33.0 | CQQIYITPYTF | 11.0 | 403.829 | null | 62.213 | 96S284M174S3N | null | 380S1N35M139S3N | 1.76e-114 | null | 1.008e-13 | 95.423 | null | 97.143 | 97 | 380 | 1 | 284 | null | null | null | null | 381 | 415 | 2 | 36 | 97 | 174 | 175 | 192 | 193 | 243 | 244 | 252 | 253 | 360 | 388.0 | 415.0 | 361.0 | 387.0 | null | 0 | null | null | GACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'N', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'F', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'M', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'V', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'I', '108 ': 'Y', '109 ': 'I', '114 ': 'T', '115 ': 'P', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'N', '124 ': 'L', '125 ': 'E', '126 ': 'I'}} | ||||Shorter than IMGT defined: fw4| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGATGTTCTCGTATT-1_contig_1 | ATCATCCAACAACCACATCCCTTCTCTACAGAAGCCTCTGAGAGGAAAGTTCTTCACCATGGACTGGACCTGGAGGGTCTTCTGCTTGCTGGCTGTAGCTCCAGGTGCTCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGATCTCCTGAGGCCACCGGATCGATCACCTGACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-46*01 | null | IGHJ6*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGATCTCCTGAGGCCACCGGATCGATCACCTGACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYYMHWVRQAPGQGLEWMGIINPSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARDLLRPPDRSPDYYYYGMDVWGQGTTVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYYMHWVRQAPGQGLEWMGIINPSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARXXXXXXXXXXXYYYYGMDVWGQGTTVTVSS | 1 | 296 | null | null | 326 | 384 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYYMHWVRQAPGQGLEWMGIINPSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYYMHWVRQAPGQGLEWMGIINPSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCAR | null | null | null | null | ACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | ACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCAGCTACTAT | GYTFTSYY | ATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATA | MHWVRQAPGQGLEWMGI | ATCAACCCTAGTGGTGGTAGCACA | INPSGGST | AGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | SYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGATCTCCTGAGGCCACCGGATCGATCACCTGACTACTACTACTACGGTATGGACGTC | ARDLLRPPDRSPDYYYYGMDV | TGTGCGAGAGATCTCCTGAGGCCACCGGATCGATCACCTGACTACTACTACTACGGTATGGACGTCTGG | 69.0 | CARDLLRPPDRSPDYYYYGMDVW | 23.0 | 463.037 | null | 114.126 | 115S296M160S | null | 440S3N59M72S | 2.7280000000000002e-132 | null | 2.4539999999999998e-29 | 100.0 | null | 100.0 | 116 | 411 | 1 | 296 | null | null | null | null | 441 | 499 | 4 | 62 | 116 | 190 | 191 | 214 | 215 | 265 | 266 | 289 | 290 | 403 | 467.0 | 499.0 | 404.0 | 466.0 | TCTCCTGAGGCCACCGGATCGATCACCTG | 29 | null | null | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'I'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'P', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'S', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'V', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'L', '109 ': 'L', '110 ': 'R', '111 ': 'P', '111A': 'P', '111B': 'D', '111C': 'R', '111D': 'S', '112D': 'P', '112C': 'D', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGATGTTCTCGTATT-1_contig_2 | GGGGAGGAGTCAGTCCCAACCAGGACACAGCATGGACATGAGGGTCCCTGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCTCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-33*01 | null | IGKJ4*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPLTFGGGTKVEIK | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPLTFGGGTKVEIK | 1 | 284 | null | null | 285 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLP | null | null | null | null | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGT | DIQMTQSPSSLSASVGDRVTITCQAS | CAGGACATTAGCAACTAT | QDISNY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAC | LNWYQQKPGKAPKLLIY | GATGCATCC | DAS | AATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGT | NLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAACAGTATGATAATCTCCCGCTCACT | QQYDNLPLT | TGTCAACAGTATGATAATCTCCCGCTCACTTTC | 33.0 | CQQYDNLPLTF | 11.0 | 444.34 | null | 73.749 | 97S284M174S3N | null | 381S38M136S | 1.125e-126 | null | 3.402e-17 | 100.0 | null | 100.0 | 98 | 381 | 1 | 284 | null | null | null | null | 382 | 419 | 1 | 38 | 98 | 175 | 176 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 389.0 | 418.0 | 362.0 | 388.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'Q', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'D', '29 ': 'I', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'L', '68 ': 'E', '69 ': 'T', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'F', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'I', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'D', '109 ': 'N', '114 ': 'L', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGATGTTCTTCGGTC-1_contig_1 | TGGGGGACTTTCTGAGACTCATGGACCTCCTGCACAAGAACATGAAACACCTGTGGTTCTTCCTCCTGCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGTAAGTTATAGTGGGAGCCTCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-4*07 | IGHD1-26*01 | IGHJ5*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGTAAGTTATAGTGGGAGCCTCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGNNNNNTATAGTGGGAGCNNCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTMSVDTSKNQFSLKLSSVTAADTAVYYCARVSYSGSLNWFDPWGQGTLVTVSS | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTMSVDTSKNQFSLKLSSVTAADTAVYYCARXXYSGSXNWFDPWGQGTLVTVSS | 1 | 292 | 298.0 | 309.0 | 312 | 361 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTMSVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTMSVDTSKNQFSLKLSSVTAADTAVYYCAR | TATAGTGGGAGC | YSGS | TATAGTGGGAGC | YSGS | CAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | CAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGTAGTTACTAC | GGSISSYY | TGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGT | WSWIRQPAGKGLEWIGR | ATCTATACCAGTGGGAGCACC | IYTSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGT | NYNPSLKSRVTMSVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGTAAGTTATAGTGGGAGCCTCAACTGGTTCGACCCC | ARVSYSGSLNWFDP | TGTGCGAGAGTAAGTTATAGTGGGAGCCTCAACTGGTTCGACCCCTGG | 48.0 | CARVSYSGSLNWFDPW | 16.0 | 456.805 | 23.76 | 96.822 | 98S292M140S1N | 395S2N12M123S6N | 409S1N50M71S | 1.896e-130 | 0.0167 | 3.68e-24 | 100.0 | 100.0 | 100.0 | 99 | 390 | 1 | 292 | 396.0 | 407.0 | 3.0 | 14.0 | 410 | 459 | 2 | 51 | 99 | 173 | 174 | 197 | 198 | 248 | 249 | 269 | 270 | 383 | 426.0 | 458.0 | 384.0 | 425.0 | TAAGT | 5 | CT | 2.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'A', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'T', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'V', '108 ': 'S', '109 ': 'Y', '110 ': 'S', '111 ': 'G', '112A': 'S', '112 ': 'L', '113 ': 'N', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGATGTTCTTCGGTC-1_contig_2 | GCTGTGCTGTGGGTCCAGGAGGCAGAACTCTGGGTGTCTCACCATGGCCTGGATCCCTCTACTTCTCCCCCTCCTCACTCTCTGCACAGGCTCTGAGGCCTCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-25*03 | null | IGLJ2*01 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTYVVFGGGTKLTVL | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTYVVFGGGTKLTVL | 1 | 288 | null | null | 289 | 325 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTAT | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTY | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTAT | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTY | null | null | null | null | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTARITCSGD | GCATTGCCAAAGCAATAT | ALPKQY | GCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATAT | AYWYQQKPGQAPVLVIY | AAAGACAGT | KDS | GAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGT | ERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAATCAGCAGACAGCAGTGGTACTTATGTGGTA | QSADSSGTYVV | TGTCAATCAGCAGACAGCAGTGGTACTTATGTGGTATTC | 39.0 | CQSADSSGTYVVF | 13.0 | 450.572 | null | 71.827 | 100S288M248S2N | null | 388S1N37M211S | 1.7170000000000002e-128 | null | 1.482e-16 | 100.0 | null | 100.0 | 101 | 388 | 1 | 288 | null | null | null | null | 389 | 425 | 2 | 38 | 101 | 175 | 176 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 395.0 | 424.0 | 362.0 | 394.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'A', '28 ': 'L', '29 ': 'P', '36 ': 'K', '37 ': 'Q', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'Y', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'K', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'E', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'S', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'T', '87 ': 'V', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'V', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'S', '107 ': 'A', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'G', '114 ': 'T', '115 ': 'Y', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCAGCAGAGTTGGC-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGCCAGCAGCTCGTCCGGGAACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD6-6*01 | IGHJ4*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGCCAGCAGCTCGTCCGGGAACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGNNAGCAGCTCGTCCNNNNACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKASSSSGNYWGQGTLVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXSSSSXXYWGQGTLVTVSS | 1 | 295 | 298.0 | 309.0 | 314 | 352 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | AGCAGCTCGTCC | SSSS | AGCAGCTCGTCC | SSSS | ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YWGQGTLVTVSS | ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YWGQGTLVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAAAGCCAGCAGCTCGTCCGGGAACTAC | AKASSSSGNY | TGTGCGAAAGCCAGCAGCTCGTCCGGGAACTACTGG | 36.0 | CAKASSSSGNYW | 12.0 | 461.479 | 23.76 | 75.672 | 136S295M128S1N | 433S6N12M114S | 449S9N39M71S | 7.854e-132 | 0.01763 | 9.039e-18 | 100.0 | 100.0 | 100.0 | 137 | 431 | 1 | 295 | 434.0 | 445.0 | 7.0 | 18.0 | 450 | 488 | 10 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 455.0 | 487.0 | 425.0 | 454.0 | CC | 2 | GGGA | 4.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'A', '108 ': 'S', '109 ': 'S', '113 ': 'S', '114 ': 'S', '115 ': 'G', '116 ': 'N', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCAGCAGAGTTGGC-1_contig_1 | AGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAAATGTGACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-5*03 | null | IGKJ1*01 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYWTFGQGTKVEIK | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYWTFGQGTKVEIK | 1 | 283 | null | null | 284 | 319 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATT | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSY | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATT | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSY | null | null | null | null | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQMTQSPSTLSASVGDRVTITCRAS | CAGAGTATTAGTAGCTGG | QSISSW | TTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | AAGGCGTCT | KAS | AGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGC | SLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAACAGTATAATAGTTATTGGACG | QQYNSYWT | TGCCAACAGTATAATAGTTATTGGACGTTC | 30.0 | CQQYNSYWTF | 10.0 | 442.782 | null | 69.904 | 93S283M172S4N | null | 376S2N36M136S | 3.269e-126 | null | 4.827e-16 | 100.0 | null | 100.0 | 94 | 376 | 1 | 283 | null | null | null | null | 377 | 412 | 3 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 382.0 | 411.0 | 358.0 | 381.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'W'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'K', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'D', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '114 ': 'S', '115 ': 'Y', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCAGCAGGCTAGCA-1_contig_2 | AGTGCTTTCTGAGAGTCATGGACCTCCTGCACAAGAACATGAAACACCTGTGGTTCTTCCTCCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCCGGTATTACTATGGTTCGGGGAAAGGGGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-34*01 | IGHD3-10*01 | IGHJ5*02 | CAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCCGGTATTACTATGGTTCGGGGAAAGGGGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGNNNGTATTACTATGGTTCGGGGANNNNNNACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGRYYYGSGKGDWFDPWGQGTLVTVSS | QVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGXYYYGSGXXXWFDPWGQGTLVTVSS | 1 | 293 | 297.0 | 316.0 | 323 | 370 | CAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGG | QVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARG | CAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGG | QVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARG | GTATTACTATGGTTCGGGGA | YYYGSG | GTATTACTATGGTTCGGGGA | YYYGSG | ACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | ACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | CAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTAT | QVQLQQWGAGLLKPSETLSLTCAVY | GGTGGGTCCTTCAGTGGTTACTAC | GGSFSGYY | TGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAA | WSWIRQPPGKGLEWIGE | ATCAATCATAGTGGAAGCACC | INHSGST | AACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGGCCGGTATTACTATGGTTCGGGGAAAGGGGACTGGTTCGACCCC | ARGRYYYGSGKGDWFDP | TGTGCGAGAGGCCGGTATTACTATGGTTCGGGGAAAGGGGACTGGTTCGACCCCTGG | 57.0 | CARGRYYYGSGKGDWFDPW | 19.0 | 458.363 | 39.141 | 92.976 | 95S293M148S | 391S20M125S11N | 417S3N48M71S | 6.515e-131 | 3.956e-07 | 5.351e-23 | 100.0 | 100.0 | 100.0 | 96 | 388 | 1 | 293 | 392.0 | 411.0 | 1.0 | 20.0 | 418 | 465 | 4 | 51 | 96 | 170 | 171 | 194 | 195 | 245 | 246 | 266 | 267 | 380 | 432.0 | 464.0 | 381.0 | 431.0 | CCG | 3 | AAGGGG | 6.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'Q', '7 ': 'W', '8 ': 'G', '9 ': 'A', '11 ': 'G', '12 ': 'L', '13 ': 'L', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'A', '25 ': 'V', '26 ': 'Y'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'F', '35 ': 'S', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'E'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'H', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'R', '109 ': 'Y', '110 ': 'Y', '111 ': 'Y', '111A': 'G', '111B': 'S', '112B': 'G', '112A': 'K', '112 ': 'G', '113 ': 'D', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCAGCAGGCTAGCA-1_contig_1 | AGCTGTGGGCTCAGAAGCAGAGTTCTGGGGTGTCTCCACCATGGCCTGGACCCCTCTCTGGCTCACTCTCCTCACTCTTTGCATAGGTTCTGTGGTTTCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGACAGCCTCAGAAGCTATTATGCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTATGGTAAAAACAACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGTAACTCCCGGGACAGCAGTGGTAACCATAAGAATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-19*01 | null | IGLJ2*01 | TCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGACAGCCTCAGAAGCTATTATGCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTATGGTAAAAACAACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGTAACTCCCGGGACAGCAGTGGTAACCATAAGAATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGACAGCCTCAGAAGCTATTATGCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTATGGTAAAAACAACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGTAACTCCCGGGACAGCAGTGGTAACCATNNNNNTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SSELTQDPAVSVALGQTVRITCQGDSLRSYYASWYQQKPGQAPVLVIYGKNNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDSSGNHKNVVFGGGTKLTVL | SSELTQDPAVSVALGQTVRITCQGDSLRSYYASWYQQKPGQAPVLVIYGKNNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDSSGNHXXVVFGGGTKLTVL | 1 | 288 | null | null | 294 | 331 | TCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGACAGCCTCAGAAGCTATTATGCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTATGGTAAAAACAACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGTAACTCCCGGGACAGCAGTGGTAACCAT | SSELTQDPAVSVALGQTVRITCQGDSLRSYYASWYQQKPGQAPVLVIYGKNNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDSSGNH | TCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGACAGCCTCAGAAGCTATTATGCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTATGGTAAAAACAACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGTAACTCCCGGGACAGCAGTGGTAACCAT | SSELTQDPAVSVALGQTVRITCQGDSLRSYYASWYQQKPGQAPVLVIYGKNNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDSSGNH | null | null | null | null | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGAC | SSELTQDPAVSVALGQTVRITCQGD | AGCCTCAGAAGCTATTAT | SLRSYY | GCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTAT | ASWYQQKPGQAPVLVIY | GGTAAAAAC | GKN | AACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGT | NRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | AACTCCCGGGACAGCAGTGGTAACCATAAGAATGTGGTA | NSRDSSGNHKNVV | TGTAACTCCCGGGACAGCAGTGGTAACCATAAGAATGTGGTATTC | 45.0 | CNSRDSSGNHKNVVF | 15.0 | 450.572 | null | 73.749 | 97S288M254S2N | null | 390S38M211S | 1.7260000000000002e-128 | null | 3.927e-17 | 100.0 | null | 100.0 | 98 | 385 | 1 | 288 | null | null | null | null | 391 | 428 | 1 | 38 | 98 | 172 | 173 | 190 | 191 | 241 | 242 | 250 | 251 | 358 | 398.0 | 427.0 | 359.0 | 397.0 | AAGAA | 5 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'S', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'D', '8 ': 'P', '9 ': 'A', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'A', '15 ': 'L', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'V', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'Q', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'S', '28 ': 'L', '29 ': 'R', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'G', '57 ': 'K', '65 ': 'N'}, 'fwl3': {'66 ': 'N', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'S', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'T', '93 ': 'G', '94 ': 'A', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'N', '106 ': 'S', '107 ': 'R', '108 ': 'D', '109 ': 'S', '110 ': 'S', '111 ': 'G', '112 ': 'N', '113 ': 'H', '114 ': 'K', '115 ': 'N', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCAGCAGTCCAGGA-1_contig_2 | ATCACATAACAACCACATTCCTCCTCTAAAGAAGCCCCTGGGAGCACAGCTCATCACCATGGACTGGACCTGGAGGTTCCTCTTTGTGGTGGCAGCAGCTACAGGTGTCCAGTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGTTCAGGTCCCTACGGTGGTAACTCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-69*01 | IGHD4-17*01 | IGHJ4*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGTTCAGGTCCCTACGGTGGTAACTCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGNNNNNNNNNCTACGGTGNNNNNNNNNTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCASSGPYGGNSLDYWGQGTLVTVSS | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCAXXXXYGXXXXDYWGQGTLVTVSS | 1 | 293 | 303.0 | 310.0 | 320 | 361 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAG | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCA | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAG | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCA | CTACGGTG | YG | CTACGGTG | YG | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGSSVKVSCKAS | GGAGGCACCTTCAGCAGCTATGCT | GGTFSSYA | ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGG | ISWVRQAPGQGLEWMGG | ATCATCCCTATCTTTGGTACAGCA | IIPIFGTA | AACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | NYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGTTCAGGTCCCTACGGTGGTAACTCCCTTGACTAC | ASSGPYGGNSLDY | TGTGCGAGTTCAGGTCCCTACGGTGGTAACTCCCTTGACTACTGG | 45.0 | CASSGPYGGNSLDYW | 15.0 | 458.363 | 16.069 | 81.44 | 115S293M139S3N | 417S3N8M122S5N | 434S6N42M71S | 6.657000000000005e-131 | 3.562 | 1.622e-19 | 100.0 | 100.0 | 100.0 | 116 | 408 | 1 | 293 | 418.0 | 425.0 | 4.0 | 11.0 | 435 | 476 | 7 | 48 | 116 | 190 | 191 | 214 | 215 | 265 | 266 | 289 | 290 | 403 | 443.0 | 475.0 | 404.0 | 442.0 | TTCAGGTCC | 9 | GTAACTCCC | 9.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'S', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'I', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'G'}, 'cdrh2': {'56 ': 'I', '57 ': 'I', '58 ': 'P', '59 ': 'I', '62 ': 'F', '63 ': 'G', '64 ': 'T', '65 ': 'A'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'A', '81 ': 'D', '82 ': 'E', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'S', '107 ': 'S', '108 ': 'G', '109 ': 'P', '110 ': 'Y', '111 ': 'G', '112 ': 'G', '113 ': 'N', '114 ': 'S', '115 ': 'L', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCAGCAGTCCAGGA-1_contig_1 | AGAGCTCTGGAGAAGAGCTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCCCGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-20*01 | null | IGKJ1*01 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCCCGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCNNGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKVEIK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPXTFGQGTKVEIK | 1 | 287 | null | null | 290 | 325 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | null | null | null | null | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPGTLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCAGCTAC | QSVSSSY | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAGTATGGTAGCTCACCCCGGACG | QQYGSSPRT | TGTCAGCAGTATGGTAGCTCACCCCGGACGTTC | 33.0 | CQQYGSSPRTF | 11.0 | 449.014 | null | 69.904 | 104S287M174S3N | null | 393S2N36M136S | 4.49e-128 | null | 4.98e-16 | 100.0 | null | 100.0 | 105 | 391 | 1 | 287 | null | null | null | null | 394 | 429 | 3 | 38 | 105 | 182 | 183 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 399.0 | 428.0 | 372.0 | 398.0 | CC | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'G', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'G', '109 ': 'S', '114 ': 'S', '115 ': 'P', '116 ': 'R', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCAGCAGTGGTAGC-1_contig_1 | ATACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACATCTGTGGTTCTTCCTTCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTTTCAGTGGGAGCTACCTTGAAATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-59*01 | IGHD1-26*01 | IGHJ4*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTTTCAGTGGGAGCTACCTTGAAATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGNNNNAGTGGGAGCTACNNNNNNNTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARVSVGATLKFDYWGQGTLVTVSS | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXVGATXXFDYWGQGTLVTVSS | 1 | 292 | 297.0 | 308.0 | 316 | 358 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | AGTGGGAGCTAC | VGAT | AGTGGGAGCTAC | VGAT | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGTAGTTACTAC | GGSISSYY | TGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTAT | WSWIRQPPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGTTTCAGTGGGAGCTACCTTGAAATTTGACTAC | ARVSVGATLKFDY | TGTGCGAGAGTTTCAGTGGGAGCTACCTTGAAATTTGACTACTGG | 45.0 | CARVSVGATLKFDYW | 15.0 | 456.805 | 23.76 | 83.363 | 94S292M137S1N | 390S5N12M121S3N | 409S5N43M71S | 1.8689999999999998e-130 | 0.01647 | 4.0880000000000005e-20 | 100.0 | 100.0 | 100.0 | 95 | 386 | 1 | 292 | 391.0 | 402.0 | 6.0 | 17.0 | 410 | 452 | 6 | 48 | 95 | 169 | 170 | 193 | 194 | 244 | 245 | 265 | 266 | 379 | 419.0 | 451.0 | 380.0 | 418.0 | TTTC | 4 | CTTGAAA | 7.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'V', '108 ': 'S', '109 ': 'V', '110 ': 'G', '111 ': 'A', '112 ': 'T', '113 ': 'L', '114 ': 'K', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCAGCAGTGGTAGC-1_contig_2 | TCTGGCGCCAGGGGTCCCTTCCAATATCAGCACCATGGCCTGGACTCCTCTCTTTCTGTTCCTCCTCACTTGCTGCCCAGGGTCCAATTCTCAGACTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGCTTCCAGCACTGGAGCAGTCACCAGTGGTTACTATCCAAACTGGTTCCAGCAGAAACCTGGACAAGCACCCAGGGCACTGATTTATAGTACAAGCAACAAACACTCCTGGACCCCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACACTGTCAGGTGTGCAGCCTGAGGACGAGGCTGAGTATTACTGCCTGCTCTACTATGGTGGTGCTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV7-43*01 | null | IGLJ3*02 | CAGACTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGCTTCCAGCACTGGAGCAGTCACCAGTGGTTACTATCCAAACTGGTTCCAGCAGAAACCTGGACAAGCACCCAGGGCACTGATTTATAGTACAAGCAACAAACACTCCTGGACCCCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACACTGTCAGGTGTGCAGCCTGAGGACGAGGCTGAGTATTACTGCCTGCTCTACTATGGTGGTGCTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGACTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGCTTCCAGCACTGGAGCAGTCACCAGTGGTTACTATCCAAACTGGTTCCAGCAGAAACCTGGACAAGCACCCAGGGCACTGATTTATAGTACAAGCAACAAACACTCCTGGACCCCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACACTGTCAGGTGTGCAGCCTGAGGACGAGGCTGAGTATTACTGCCTGCTCTACTATGGTGGTGCTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QTVVTQEPSLTVSPGGTVTLTCASSTGAVTSGYYPNWFQQKPGQAPRALIYSTSNKHSWTPARFSGSLLGGKAALTLSGVQPEDEAEYYCLLYYGGAWVFGGGTKLTVL | QTVVTQEPSLTVSPGGTVTLTCASSTGAVTSGYYPNWFQQKPGQAPRALIYSTSNKHSWTPARFSGSLLGGKAALTLSGVQPEDEAEYYCLLYYGGAWVFGGGTKLTVL | 1 | 291 | null | null | 292 | 328 | CAGACTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGCTTCCAGCACTGGAGCAGTCACCAGTGGTTACTATCCAAACTGGTTCCAGCAGAAACCTGGACAAGCACCCAGGGCACTGATTTATAGTACAAGCAACAAACACTCCTGGACCCCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACACTGTCAGGTGTGCAGCCTGAGGACGAGGCTGAGTATTACTGCCTGCTCTACTATGGTGGTGCT | QTVVTQEPSLTVSPGGTVTLTCASSTGAVTSGYYPNWFQQKPGQAPRALIYSTSNKHSWTPARFSGSLLGGKAALTLSGVQPEDEAEYYCLLYYGGA | CAGACTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGCTTCCAGCACTGGAGCAGTCACCAGTGGTTACTATCCAAACTGGTTCCAGCAGAAACCTGGACAAGCACCCAGGGCACTGATTTATAGTACAAGCAACAAACACTCCTGGACCCCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACACTGTCAGGTGTGCAGCCTGAGGACGAGGCTGAGTATTACTGCCTGCTCTACTATGGTGGTGCT | QTVVTQEPSLTVSPGGTVTLTCASSTGAVTSGYYPNWFQQKPGQAPRALIYSTSNKHSWTPARFSGSLLGGKAALTLSGVQPEDEAEYYCLLYYGGA | null | null | null | null | TGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | TGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | CAGACTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGCTTCCAGC | QTVVTQEPSLTVSPGGTVTLTCASS | ACTGGAGCAGTCACCAGTGGTTACTAT | TGAVTSGYY | CCAAACTGGTTCCAGCAGAAACCTGGACAAGCACCCAGGGCACTGATTTAT | PNWFQQKPGQAPRALIY | AGTACAAGC | STS | AACAAACACTCCTGGACCCCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACACTGTCAGGTGTGCAGCCTGAGGACGAGGCTGAGTATTACTGC | NKHSWTPARFSGSLLGGKAALTLSGVQPEDEAEYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CTGCTCTACTATGGTGGTGCTTGGGTG | LLYYGGAWV | TGCCTGCTCTACTATGGTGGTGCTTGGGTGTTC | 33.0 | CLLYYGGAWVF | 11.0 | 455.247 | null | 71.827 | 91S291M248S3N | null | 382S1N37M211S | 6.659e-130 | null | 1.468e-16 | 100.0 | null | 100.0 | 92 | 382 | 1 | 291 | null | null | null | null | 383 | 419 | 2 | 38 | 92 | 166 | 167 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 389.0 | 418.0 | 362.0 | 388.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'T', '3 ': 'V', '4 ': 'V', '5 ': 'T', '6 ': 'Q', '7 ': 'E', '8 ': 'P', '9 ': 'S', '11 ': 'L', '12 ': 'T', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'T', '19 ': 'V', '20 ': 'T', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'A', '25 ': 'S', '26 ': 'S'}, 'cdrl1': {'27 ': 'T', '28 ': 'G', '29 ': 'A', '30 ': 'V', '31 ': 'T', '35 ': 'S', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwl2': {'39 ': 'P', '40 ': 'N', '41 ': 'W', '42 ': 'F', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'A', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'S', '57 ': 'T', '65 ': 'S'}, 'fwl3': {'66 ': 'N', '67 ': 'K', '68 ': 'H', '69 ': 'S', '70 ': 'W', '71 ': 'T', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'L', '83 ': 'L', '84 ': 'G', '85 ': 'G', '86 ': 'K', '87 ': 'A', '88 ': 'A', '89 ': 'L', '90 ': 'T', '91 ': 'L', '92 ': 'S', '93 ': 'G', '94 ': 'V', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'E', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'L', '106 ': 'L', '107 ': 'Y', '108 ': 'Y', '109 ': 'G', '114 ': 'G', '115 ': 'A', '116 ': 'W', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCAGCAGTGTCTCA-1_contig_2 | AGCTCTGGGAGAGGAGCCCCAGCCCTGAGATTCCCAGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGAACTCACCATGGAGTTTGGACTGAGCTGGGTTTTCCTTGTTGCTATTTTAAAAGGTGTCCAGTGTGAAGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGTCAAGCTCCAGGGAAGGGTCTGGAGTGGGTCTCTCTTATTAGTGGGGATGGTGGTAGCACATACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCAAAAACTCCCTGTATCTGCAAATGAACAGTCTGAGAACTGAGGACACCGCCTTGTATTACTGTGCAAAAGCGGGTGGATATAGTGGCTACAACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-43*02 | IGHD5-12*01 | IGHJ6*02 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGTCAAGCTCCAGGGAAGGGTCTGGAGTGGGTCTCTCTTATTAGTGGGGATGGTGGTAGCACATACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCAAAAACTCCCTGTATCTGCAAATGAACAGTCTGAGAACTGAGGACACCGCCTTGTATTACTGTGCAAAAGCGGGTGGATATAGTGGCTACAACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGTCAAGCTCCAGGGAAGGGTCTGGAGTGGGTCTCTCTTATTAGTGGGGATGGTGGTAGCACATACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCAAAAACTCCCTGTATCTGCAAATGAACAGTCTGAGAACTGAGGACACCGCCTTGTATTACTGTGCAAAAGNNNGTGGATATAGTGGCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLVESGGGVVQPGGSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSLISGDGGSTYYADSVKGRFTISRDNSKNSLYLQMNSLRTEDTALYYCAKAGGYSGYNGMDVWGQGTTVTVSS | EVQLVESGGGVVQPGGSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSLISGDGGSTYYADSVKGRFTISRDNSKNSLYLQMNSLRTEDTALYYCAKXXGYSGYYGMDVWGQGTTVTVSS | 1 | 295 | 299.0 | 311.0 | 312 | 363 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGTCAAGCTCCAGGGAAGGGTCTGGAGTGGGTCTCTCTTATTAGTGGGGATGGTGGTAGCACATACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCAAAAACTCCCTGTATCTGCAAATGAACAGTCTGAGAACTGAGGACACCGCCTTGTATTACTGTGCAAAAG | EVQLVESGGGVVQPGGSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSLISGDGGSTYYADSVKGRFTISRDNSKNSLYLQMNSLRTEDTALYYCAK | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGTCAAGCTCCAGGGAAGGGTCTGGAGTGGGTCTCTCTTATTAGTGGGGATGGTGGTAGCACATACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCAAAAACTCCCTGTATCTGCAAATGAACAGTCTGAGAACTGAGGACACCGCCTTGTATTACTGTGCAAAAG | EVQLVESGGGVVQPGGSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSLISGDGGSTYYADSVKGRFTISRDNSKNSLYLQMNSLRTEDTALYYCAK | GTGGATATAGTGG | GYSG | GTGGATATAGTGG | GYSG | CTACAACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YNGMDVWGQGTTVTVSS | CTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYGMDVWGQGTTVTVSS | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGVVQPGGSLRLSCAAS | GGATTCACCTTTGATGATTATGCC | GFTFDDYA | ATGCACTGGGTCCGTCAAGCTCCAGGGAAGGGTCTGGAGTGGGTCTCTCTT | MHWVRQAPGKGLEWVSL | ATTAGTGGGGATGGTGGTAGCACA | ISGDGGST | TACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCAAAAACTCCCTGTATCTGCAAATGAACAGTCTGAGAACTGAGGACACCGCCTTGTATTACTGT | YYADSVKGRFTISRDNSKNSLYLQMNSLRTEDTALYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCAAAAGCGGGTGGATATAGTGGCTACAACGGTATGGACGTC | AKAGGYSGYNGMDV | TGTGCAAAAGCGGGTGGATATAGTGGCTACAACGGTATGGACGTCTGG | 48.0 | CAKAGGYSGYNGMDVW | 16.0 | 461.479 | 25.682 | 94.899 | 137S295M140S3N | 435S13M124S10N | 448S10N52M72S | 8.046e-132 | 0.004759 | 1.508e-23 | 100.0 | 100.0 | 98.077 | 138 | 432 | 1 | 295 | 436.0 | 448.0 | 1.0 | 13.0 | 449 | 500 | 11 | 62 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 468.0 | 500.0 | 426.0 | 467.0 | CGG | 3 | null | 0.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'D', '36 ': 'D', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'L'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'D', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'L', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'A', '108 ': 'G', '109 ': 'G', '110 ': 'Y', '111 ': 'S', '112A': 'G', '112 ': 'Y', '113 ': 'N', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCAGCAGTGTCTCA-1_contig_1 | GGACTCAGGACAATCTCCAGCATGGCCAGCTTCCCTCTCCTCCTCACCCTCCTCACTCACTGTGCAGGGTCCTGGGCCCAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-44*01 | null | IGLJ2*01 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGVVFGGGTKLTVL | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGVVFGGGTKLTVL | 1 | 294 | null | null | 295 | 331 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGT | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGT | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNG | null | null | null | null | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGC | QSVLTQPPSASGTPGQRVTISCSGS | AGCTCCAACATCGGAAGTAATACT | SSNIGSNT | GTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTAT | VNWYQQLPGTAPKLLIY | AGTAATAAT | SNN | CAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGT | QRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | GCAGCATGGGATGACAGCCTGAATGGTGTGGTA | AAWDDSLNGVV | TGTGCAGCATGGGATGACAGCCTGAATGGTGTGGTATTC | 39.0 | CAAWDDSLNGVVF | 13.0 | 459.921 | null | 71.827 | 78S294M248S2N | null | 372S1N37M211S | 2.564e-131 | null | 1.444e-16 | 100.0 | null | 100.0 | 79 | 372 | 1 | 294 | null | null | null | null | 373 | 409 | 2 | 38 | 79 | 153 | 154 | 177 | 178 | 228 | 229 | 237 | 238 | 345 | 379.0 | 408.0 | 346.0 | 378.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'A', '12 ': 'S', '13 ': 'G', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'S', '37 ': 'N', '38 ': 'T'}, 'fwl2': {'39 ': 'V', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'S', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'Q', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'A', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'A', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'D', '110 ': 'S', '113 ': 'L', '114 ': 'N', '115 ': 'G', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCAGCCAAATTGCC-1_contig_2 | ATCACATAACAACCAGATTCCTCCTCTAAAGAAGCCCCTGGGAGCACAGCTCATCACCATGGACTGGACCTGGAGGTTCCTCTTTGTGGTGGCAGCAGCTACAGGTGTCCAGTCCCAGGTCCAGCTGGTGCAATCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATACTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCATCCCTATCCTTGGTATAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGATCGAACGGTAGCAGCAGCTGGCACTGTTGCCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-69*08 | IGHD6-13*01 | IGHJ6*02 | CAGGTCCAGCTGGTGCAATCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATACTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCATCCCTATCCTTGGTATAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGATCGAACGGTAGCAGCAGCTGGCACTGTTGCCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTCCAGCTGGTGCAATCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATACTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCATCCCTATCCTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGANNNNNNNNTAGCAGCAGCTGGNNNNNNNNNCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYTISWVRQAPGQGLEWMGRIIPILGIANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARDRTVAAAGTVAYYYYGMDVWGQGTTVTVSS | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYTISWVRQAPGQGLEWMGRIIPILGTANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARXXXXAAAGXXXYYYYGMDVWGQGTTVTVSS | 1 | 296 | 305.0 | 317.0 | 327 | 384 | CAGGTCCAGCTGGTGCAATCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATACTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCATCCCTATCCTTGGTATAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYTISWVRQAPGQGLEWMGRIIPILGIANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCAR | CAGGTCCAGCTGGTGCAATCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATACTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCATCCCTATCCTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYTISWVRQAPGQGLEWMGRIIPILGTANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCAR | TAGCAGCAGCTGG | AAAG | TAGCAGCAGCTGG | AAAG | CTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CAGGTCCAGCTGGTGCAATCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGSSVKVSCKAS | GGAGGCACCTTCAGCAGCTATACT | GGTFSSYT | ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGG | ISWVRQAPGQGLEWMGR | ATCATCCCTATCCTTGGTATAGCA | IIPILGIA | AACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | NYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGATCGAACGGTAGCAGCAGCTGGCACTGTTGCCTACTACTACTACGGTATGGACGTC | ARDRTVAAAGTVAYYYYGMDV | TGTGCGAGAGATCGAACGGTAGCAGCAGCTGGCACTGTTGCCTACTACTACTACGGTATGGACGTCTGG | 69.0 | CARDRTVAAAGTVAYYYYGMDVW | 23.0 | 459.921 | 25.682 | 112.203 | 115S296M160S | 419S5N13M139S3N | 441S4N58M72S | 2.365e-131 | 0.004751 | 9.302e-29 | 99.662 | 100.0 | 100.0 | 116 | 411 | 1 | 296 | 420.0 | 432.0 | 6.0 | 18.0 | 442 | 499 | 5 | 62 | 116 | 190 | 191 | 214 | 215 | 265 | 266 | 289 | 290 | 403 | 467.0 | 499.0 | 404.0 | 466.0 | TCGAACGG | 8 | CACTGTTGC | 9.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'S', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'T'}, 'fwh2': {'39 ': 'I', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'I', '58 ': 'P', '59 ': 'I', '62 ': 'L', '63 ': 'G', '64 ': 'I', '65 ': 'A'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'A', '81 ': 'D', '82 ': 'K', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'R', '109 ': 'T', '110 ': 'V', '111 ': 'A', '111A': 'A', '111B': 'A', '111C': 'G', '111D': 'T', '112D': 'V', '112C': 'A', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCAGCCAAATTGCC-1_contig_1 | AGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAAATGTGACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCCCCGGGGGTCACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-5*03 | null | IGKJ2*01 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCCCCGGGGGTCACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCCNNNNNNCACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSPGVTFGQGTKLEIK | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSPXXTFGQGTKLEIK | 1 | 287 | null | null | 294 | 328 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCCCC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSP | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSP | null | null | null | null | CACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | TFGQGTKLEIK | CACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | TFGQGTKLEIK | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQMTQSPSTLSASVGDRVTITCRAS | CAGAGTATTAGTAGCTGG | QSISSW | TTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | AAGGCGTCT | KAS | AGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGC | SLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAACAGTATAATAGTTATTCCCCGGGGGTCACT | QQYNSYSPGVT | TGCCAACAGTATAATAGTTATTCCCCGGGGGTCACTTTT | 39.0 | CQQYNSYSPGVTF | 13.0 | 445.898 | null | 67.981 | 93S287M177S | null | 386S4N35M136S | 3.8359999999999995e-127 | null | 1.861e-15 | 99.652 | null | 100.0 | 94 | 380 | 1 | 287 | null | null | null | null | 387 | 421 | 5 | 39 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 391.0 | 420.0 | 358.0 | 390.0 | GGGGGT | 6 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'W'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'K', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'D', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'S', '110 ': 'Y', '113 ': 'S', '114 ': 'P', '115 ': 'G', '116 ': 'V', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCAGCCAATAGCAA-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGACTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGTTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGACGATTGTAGTGGTGGTAGCTGCTACGGATGGTTCTACTCTTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD2-15*01 | IGHJ6*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGTTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGACGATTGTAGTGGTGGTAGCTGCTACGGATGGTTCTACTCTTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGANNATTGTAGTGGTGGTAGCTGCTACNNNNNNNNCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMNWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDDCSGGSCYGWFYSYGMDVWGQGTTVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXCSGGSCYXXXYYYGMDVWGQGTTVTVSS | 1 | 296 | 299.0 | 321.0 | 330 | 384 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGTTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMNWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | ATTGTAGTGGTGGTAGCTGCTAC | CSGGSCY | ATTGTAGTGGTGGTAGCTGCTAC | CSGGSCY | CTACTCTTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YSYGMDVWGQGTTVTVSS | CTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MNWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGTTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAAAGACGATTGTAGTGGTGGTAGCTGCTACGGATGGTTCTACTCTTACGGTATGGACGTC | AKDDCSGGSCYGWFYSYGMDV | TGTGCGAAAGACGATTGTAGTGGTGGTAGCTGCTACGGATGGTTCTACTCTTACGGTATGGACGTCTGG | 69.0 | CAKDDCSGGSCYGWFYSYGMDVW | 23.0 | 456.805 | 44.909 | 94.899 | 136S296M160S | 434S5N23M135S3N | 465S7N55M72S | 2.118e-130 | 8.033e-09 | 1.562e-23 | 99.324 | 100.0 | 96.364 | 137 | 432 | 1 | 296 | 435.0 | 457.0 | 6.0 | 28.0 | 466 | 520 | 8 | 62 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 488.0 | 520.0 | 425.0 | 487.0 | CG | 2 | GGATGGTT | 8.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'D', '108 ': 'D', '109 ': 'C', '110 ': 'S', '111 ': 'G', '111A': 'G', '111B': 'S', '111C': 'C', '111D': 'Y', '112D': 'G', '112C': 'W', '112B': 'F', '112A': 'Y', '112 ': 'S', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCAGCCAATAGCAA-1_contig_1 | TGAGCGCAGAAGGCAGGACTCGGGACAATCTTCATCATGACCTGCTCCCCTCTCCTCCTCACCCTTCTCATTCACTGCACAGGGTCCTGGGCCCAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAACACCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTGGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-51*01 | null | IGLJ3*02 | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAACACCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTGGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTGGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQHLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSAGVFGGGTKLTVL | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSAGVFGGGTKLTVL | 1 | 296 | null | null | 297 | 331 | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAACACCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTGG | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQHLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSAG | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTGG | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSAG | null | null | null | null | GGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGC | QSVLTQPPSVSAAPGQKVTISCSGS | AGCTCCAACATTGGGAATAATTAT | SSNIGNNY | GTATCCTGGTACCAACACCTCCCAGGAACAGCCCCCAAACTCCTCATTTAT | VSWYQHLPGTAPKLLIY | GACAATAAT | DNN | AAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGC | KRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | GGAACATGGGATAGCAGCCTGAGTGCTGGGGTG | GTWDSSLSAGV | TGCGGAACATGGGATAGCAGCCTGAGTGCTGGGGTGTTC | 39.0 | CGTWDSSLSAGVF | 13.0 | 456.805 | null | 67.981 | 93S296M246S | null | 389S3N35M211S | 2.28e-130 | null | 2.127e-15 | 99.324 | null | 100.0 | 94 | 389 | 1 | 296 | null | null | null | null | 390 | 424 | 4 | 38 | 94 | 168 | 169 | 192 | 193 | 243 | 244 | 252 | 253 | 360 | 394.0 | 423.0 | 361.0 | 393.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'A', '14 ': 'A', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'K', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'N', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'H', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'D', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'G', '91 ': 'I', '92 ': 'T', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'T', '97 ': 'G', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'G', '106 ': 'T', '107 ': 'W', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'L', '114 ': 'S', '115 ': 'A', '116 ': 'G', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCAGCCACTGTTAG-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATTTGCCAGCTATGGTTAAAAAACGTTCATTCGGGGAGTTATCGGATGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD3-10*01 | IGHJ3*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATTTGCCAGCTATGGTTAAAAAACGTTCATTCGGGGAGTTATCGGATGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCGGGGAGTTATNNNNTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDLPAMVKKRSFGELSDDAFDIWGQGTMVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXXXXXXXXXFGELXXDAFDIWGQGTMVTVSS | 1 | 296 | 325.0 | 337.0 | 342 | 391 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | TTCGGGGAGTTAT | FGEL | TTCGGGGAGTTAT | FGEL | TGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | TGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGAAAGATTTGCCAGCTATGGTTAAAAAACGTTCATTCGGGGAGTTATCGGATGATGCTTTTGATATC | AKDLPAMVKKRSFGELSDDAFDI | TGTGCGAAAGATTTGCCAGCTATGGTTAAAAAACGTTCATTCGGGGAGTTATCGGATGATGCTTTTGATATCTGG | 75.0 | CAKDLPAMVKKRSFGELSDDAFDIW | 25.0 | 463.037 | 25.682 | 96.822 | 136S296M166S | 460S12N13M125S6N | 477S50M71S | 2.8470000000000003e-132 | 0.00498 | 4.1619999999999996e-24 | 100.0 | 100.0 | 100.0 | 137 | 432 | 1 | 296 | 461.0 | 473.0 | 13.0 | 25.0 | 478 | 527 | 1 | 50 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 494.0 | 526.0 | 425.0 | 493.0 | TTTGCCAGCTATGGTTAAAAAACGTTCA | 28 | CGGA | 4.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'D', '108 ': 'L', '109 ': 'P', '110 ': 'A', '111 ': 'M', '111A': 'V', '111B': 'K', '111C': 'K', '111D': 'R', '111E': 'S', '112E': 'F', '112D': 'G', '112C': 'E', '112B': 'L', '112A': 'S', '112 ': 'D', '113 ': 'D', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCAGCCACTGTTAG-1_contig_1 | AGAGCTCTGGAGAAGAGCTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTAGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-20*01 | null | IGKJ1*01 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTAGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTNGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKVEIK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPXTFGQGTKVEIK | 1 | 288 | null | null | 290 | 325 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCT | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCT | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | null | null | null | null | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPGTLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCAGCTAC | QSVSSSY | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAGTATGGTAGCTCACCTAGGACG | QQYGSSPRT | TGTCAGCAGTATGGTAGCTCACCTAGGACGTTC | 33.0 | CQQYGSSPRTF | 11.0 | 450.572 | null | 69.904 | 104S288M173S2N | null | 393S2N36M136S | 1.5250000000000002e-128 | null | 4.98e-16 | 100.0 | null | 100.0 | 105 | 392 | 1 | 288 | null | null | null | null | 394 | 429 | 3 | 38 | 105 | 182 | 183 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 399.0 | 428.0 | 372.0 | 398.0 | A | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'G', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'G', '109 ': 'S', '114 ': 'S', '115 ': 'P', '116 ': 'R', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCAGCCAGTGACAG-1_contig_2 | ACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACATCTGTGGTTCTTCCTTCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATCCTGTGGTGGTGACTGCTATCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-59*01 | IGHD2-21*02 | IGHJ4*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATCCTGTGGTGGTGACTGCTATCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGANNNTGTGGTGGTGACTGCTATNACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARSCGGDCYHYFDYWGQGTLVTVSS | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXCGGDCYXYFDYWGQGTLVTVSS | 1 | 291 | 295.0 | 312.0 | 314 | 361 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGA | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGA | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | TGTGGTGGTGACTGCTAT | CGGDCY | TGTGGTGGTGACTGCTAT | CGGDCY | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGTAGTTACTAC | GGSISSYY | TGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTAT | WSWIRQPPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGATCCTGTGGTGGTGACTGCTATCACTACTTTGACTAC | ARSCGGDCYHYFDY | TGTGCGAGATCCTGTGGTGGTGACTGCTATCACTACTTTGACTACTGG | 48.0 | CARSCGGDCYHYFDYW | 16.0 | 455.247 | 35.296 | 92.976 | 92S291M141S2N | 386S7N18M120S3N | 405S48M71S | 5.516e-130 | 5.557e-06 | 5.229e-23 | 100.0 | 100.0 | 100.0 | 93 | 383 | 1 | 291 | 387.0 | 404.0 | 8.0 | 25.0 | 406 | 453 | 1 | 48 | 93 | 167 | 168 | 191 | 192 | 242 | 243 | 263 | 264 | 377 | 420.0 | 452.0 | 378.0 | 419.0 | TCC | 3 | C | 1.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'S', '108 ': 'C', '109 ': 'G', '110 ': 'G', '111 ': 'D', '112A': 'C', '112 ': 'Y', '113 ': 'H', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCAGCCAGTGACAG-1_contig_1 | TGGGGAGTCAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCGGACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ2*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCGGACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCNNACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPRTFGQGTKLEIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPXTFGQGTKLEIK | 1 | 286 | null | null | 289 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | null | null | null | null | ACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | TFGQGTKLEIK | ACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | TFGQGTKLEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAACAGAGTTACAGTACCCCTCGGACT | QQSYSTPRT | TGTCAACAGAGTTACAGTACCCCTCGGACTTTT | 33.0 | CQQSYSTPRTF | 11.0 | 447.456 | null | 66.059 | 95S286M172S1N | null | 383S5N34M136S | 1.293e-127 | null | 7.003e-15 | 100.0 | null | 100.0 | 96 | 381 | 1 | 286 | null | null | null | null | 384 | 417 | 6 | 39 | 96 | 173 | 174 | 191 | 192 | 242 | 243 | 251 | 252 | 359 | 387.0 | 416.0 | 360.0 | 386.0 | GG | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'P', '116 ': 'R', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCAGCCATTGGTAC-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGACAGTAGTAGCGGATTTGAGGACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD2-2*01 | IGHJ6*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGACAGTAGTAGCGGATTTGAGGACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGANNGTAGTAGNNNNNNNNNNNACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDSSSGFEDYYYGMDVWGQGTTVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXSXXXXXYYYGMDVWGQGTTVTVSS | 1 | 296 | 299.0 | 305.0 | 317 | 372 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GTAGTAG | S | GTAGTAG | S | ACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | ACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAAAGACAGTAGTAGCGGATTTGAGGACTACTACTACGGTATGGACGTC | AKDSSSGFEDYYYGMDV | TGTGCGAAAGACAGTAGTAGCGGATTTGAGGACTACTACTACGGTATGGACGTCTGG | 57.0 | CAKDSSSGFEDYYYGMDVW | 19.0 | 463.037 | 14.146 | 108.358 | 136S296M148S | 434S8N7M139S16N | 452S6N56M72S | 2.757e-132 | 14.34 | 1.359e-27 | 100.0 | 100.0 | 100.0 | 137 | 432 | 1 | 296 | 435.0 | 441.0 | 9.0 | 15.0 | 453 | 508 | 7 | 62 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 476.0 | 508.0 | 425.0 | 475.0 | CA | 2 | CGGATTTGAGG | 11.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'D', '108 ': 'S', '109 ': 'S', '110 ': 'S', '111 ': 'G', '111A': 'F', '111B': 'E', '112B': 'D', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCAGCCATTGGTAC-1_contig_1 | CTGGGCCTCAGGAAGCAGCATCGGAGGTGCCTCAGCCATGGCATGGATCCCTCTCTTCCTCGGCGTCCTTGCTTACTGCACAGGATCCGTGGCCTCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTCTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-1*01 | null | IGLJ2*01 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTCTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTNTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTLVFGGGTKLTVL | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTXVFGGGTKLTVL | 1 | 282 | null | null | 284 | 319 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACT | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSST | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACT | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSST | null | null | null | null | TGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTASITCSGD | AAATTGGGGGATAAATAT | KLGDKY | GCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTAT | ACWYQQKPGQSPVLVIY | CAAGATAGC | QDS | AAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGT | KRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGGCGTGGGACAGCAGCACTCTGGTA | QAWDSSTLV | TGTCAGGCGTGGGACAGCAGCACTCTGGTATTC | 33.0 | CQAWDSSTLVF | 11.0 | 441.224 | null | 69.904 | 94S282M248S3N | null | 377S2N36M211S | 1.097e-125 | null | 5.51e-16 | 100.0 | null | 100.0 | 95 | 376 | 1 | 282 | null | null | null | null | 378 | 413 | 3 | 38 | 95 | 169 | 170 | 187 | 188 | 238 | 239 | 247 | 248 | 355 | 383.0 | 412.0 | 356.0 | 382.0 | C | 1 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'K', '28 ': 'L', '29 ': 'G', '36 ': 'D', '37 ': 'K', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'C', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'Q', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'T', '95 ': 'Q', '96 ': 'A', '97 ': 'M', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'S', '114 ': 'S', '115 ': 'T', '116 ': 'L', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCAGCGTAGTACCT-1_contig_2 | TGGGGAGTGACTCCTGTGCCCCACCATGGACACACTTTGCTCCACGCTCCTGCTGCTGACCATCCCTTCATGGGTCTTGTCCCAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGAATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAGAGTACGGGCGGCGGCGGCCAAGTTTCATGACTACGGTGACTACGTCTCGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV2-5*01 | IGHD4-17*01 | IGHJ5*02 | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGAATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAGAGTACGGGCGGCGGCGGCCAAGTTTCATGACTACGGTGACTACGTCTCGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGAATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAGANNNNNNNNNNNNNNNNNNNNNNNNNNTGACTACGGTGACTACNNNNNGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWNDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAHRVRAAAAKFHDYGDYVSFDPWGQGTLVTVSS | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWNDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAHRXXXXXXXXXDYGDYXXFDPWGQGTLVTVSS | 1 | 300 | 327.0 | 342.0 | 348 | 391 | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGAATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAGA | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWNDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAHR | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGAATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAGA | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWNDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAHR | TGACTACGGTGACTAC | DYGDY | TGACTACGGTGACTAC | DYGDY | GTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDPWGQGTLVTVSS | GTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDPWGQGTLVTVSS | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCT | QITLKESGPTLVKPTQTLTLTCTFS | GGGTTCTCACTCAGCACTAGTGGAGTGGGT | GFSLSTSGVG | GTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTC | VGWIRQPPGKALEWLAL | ATTTATTGGAATGATGATAAG | IYWNDDK | CGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGT | RYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCACACAGAGTACGGGCGGCGGCGGCCAAGTTTCATGACTACGGTGACTACGTCTCGTTCGACCCC | AHRVRAAAAKFHDYGDYVSFDP | TGTGCACACAGAGTACGGGCGGCGGCGGCCAAGTTTCATGACTACGGTGACTACGTCTCGTTCGACCCCTGG | 72.0 | CAHRVRAAAAKFHDYGDYVSFDPW | 24.0 | 469.27 | 31.45 | 85.286 | 82S300M162S1N | 408S16M120S | 429S7N44M71S | 3.4469999999999997e-134 | 8.299e-05 | 1.1220000000000001e-20 | 100.0 | 100.0 | 100.0 | 83 | 382 | 1 | 300 | 409.0 | 424.0 | 1.0 | 16.0 | 430 | 473 | 8 | 51 | 83 | 157 | 158 | 187 | 188 | 238 | 239 | 259 | 260 | 373 | 440.0 | 472.0 | 374.0 | 439.0 | GTACGGGCGGCGGCGGCCAAGTTTCA | 26 | GTCTC | 5.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'I', '3 ': 'T', '4 ': 'L', '5 ': 'K', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'T', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'T', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'T', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'F', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'S', '30 ': 'L', '31 ': 'S', '34 ': 'T', '35 ': 'S', '36 ': 'G', '37 ': 'V', '38 ': 'G'}, 'fwh2': {'39 ': 'V', '40 ': 'G', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'L', '54 ': 'A', '55 ': 'L'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'W', '59 ': 'N', '63 ': 'D', '64 ': 'D', '65 ': 'K'}, 'fwh3': {'66 ': 'R', '67 ': 'Y', '68 ': 'S', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'L', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'K', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'V', '88 ': 'V', '89 ': 'L', '90 ': 'T', '91 ': 'M', '92 ': 'T', '93 ': 'N', '94 ': 'M', '95 ': 'D', '96 ': 'P', '97 ': 'V', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'H', '107 ': 'R', '108 ': 'V', '109 ': 'R', '110 ': 'A', '111 ': 'A', '111A': 'A', '111B': 'A', '111C': 'K', '111D': 'F', '112E': 'H', '112D': 'D', '112C': 'Y', '112B': 'G', '112A': 'D', '112 ': 'Y', '113 ': 'V', '114 ': 'S', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCAGCGTAGTACCT-1_contig_1 | TGGGGAGTCAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCGTGGGCGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ1*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCGTGGGCGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPWAFGQGTKVEIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPWTFGQGTKVEIK | 1 | 284 | null | null | 285 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | null | null | null | null | GTGGGCGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WAFGQGTKVEIK | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAACAGAGTTACAGTACCCCGTGGGCG | QQSYSTPWA | TGTCAACAGAGTTACAGTACCCCGTGGGCGTTC | 33.0 | CQQSYSTPWAF | 11.0 | 444.34 | null | 67.981 | 95S284M174S3N | null | 379S38M136S | 1.121e-126 | null | 1.847e-15 | 100.0 | null | 97.368 | 96 | 379 | 1 | 284 | null | null | null | null | 380 | 417 | 1 | 38 | 96 | 173 | 174 | 191 | 192 | 242 | 243 | 251 | 252 | 359 | 387.0 | 416.0 | 360.0 | 386.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'P', '116 ': 'W', '117 ': 'A'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCAGCGTATTAGCC-1_contig_2 | CGAGCCCAGCACTGGAAGTCGCCGGTGTTTCCATTCGGTGATCATCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGGGGGGGACAGTGGGAGCTACCTTCCGACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30-3*01 | IGHD1-26*01 | IGHJ4*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGGGGGGGACAGTGGGAGCTACCTTCCGACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGNNNNNNNNAGTGGGAGCTACNNNNNNACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGGQWELPSDFDYWGQGTLVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAXXXXWELXXXFDYWGQGTLVTVSS | 1 | 293 | 302.0 | 313.0 | 320 | 364 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | AGTGGGAGCTAC | WEL | AGTGGGAGCTAC | WEL | ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGCT | GFTFSSYA | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGCAATAAA | ISYDGSNK | TACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGGGGGGGACAGTGGGAGCTACCTTCCGACTTTGACTAC | ARGGQWELPSDFDY | TGTGCGAGGGGGGGACAGTGGGAGCTACCTTCCGACTTTGACTACTGG | 48.0 | CARGGQWELPSDFDYW | 16.0 | 458.363 | 23.76 | 87.208 | 124S293M142S3N | 425S5N12M122S3N | 443S3N45M71S | 6.810000000000005e-131 | 0.01763 | 3.044e-21 | 100.0 | 100.0 | 100.0 | 125 | 417 | 1 | 293 | 426.0 | 437.0 | 6.0 | 17.0 | 444 | 488 | 4 | 48 | 125 | 199 | 200 | 223 | 224 | 274 | 275 | 298 | 299 | 412 | 455.0 | 487.0 | 413.0 | 454.0 | GGGGGGAC | 8 | CTTCCG | 6.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'G', '109 ': 'Q', '110 ': 'W', '111 ': 'E', '112A': 'L', '112 ': 'P', '113 ': 'S', '114 ': 'D', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCAGCGTATTAGCC-1_contig_1 | GAGCTACAACAGGCAGGCAGGGGCAGCAAGATGGTGTTGCAGACCCAGGTCTTCATTTCTCTGTTGCTCTGGATCTCTGGTGCCTACGGGGACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCGAACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV4-1*01 | null | IGKJ1*01 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCGAACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCNNACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPRTFGQGTKVEIK | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPXTFGQGTKVEIK | 1 | 304 | null | null | 307 | 340 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTP | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTP | null | null | null | null | ACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | ACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGC | DIVMTQSPDSLAVSLGERATINCKSS | CAGAGTGTTTTATACAGCTCCAACAATAAGAACTAC | QSVLYSSNNKNY | TTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTAC | LAWYQQKPGQPPKLLIY | TGGGCATCT | WAS | ACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGT | TRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAATATTATAGTACTCCTCGAACG | QQYYSTPRT | TGTCAGCAATATTATAGTACTCCTCGAACGTTC | 33.0 | CQQYYSTPRTF | 11.0 | 475.502 | null | 66.059 | 90S304M172S1N | null | 396S4N34M136S | 4.78e-136 | null | 7.171e-15 | 100.0 | null | 100.0 | 91 | 394 | 1 | 304 | null | null | null | null | 397 | 430 | 5 | 38 | 91 | 168 | 169 | 204 | 205 | 255 | 256 | 264 | 265 | 372 | 400.0 | 429.0 | 373.0 | 399.0 | GA | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'D', '10 ': 'S', '11 ': 'L', '12 ': 'A', '13 ': 'V', '14 ': 'S', '15 ': 'L', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'I', '22 ': 'N', '23 ': 'C', '24 ': 'K', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'L', '31 ': 'Y', '32 ': 'S', '33 ': 'S', '34 ': 'N', '35 ': 'N', '36 ': 'K', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'P', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'W', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'P', '116 ': 'R', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCAGCGTCCAACTA-1_contig_1 | ACAACCACACCCCTCCTAAGAAGAAGCCCCTAGACCACAGCTCCACACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCAACAGGTGCCCACTCCCAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCAACACTGGGAACCCAACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGTGCGAGGCGAGCTTCTGAACCTTTTGGAGTGGTCCTCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV7-4-1*02 | IGHD3-3*01 | IGHJ5*02 | CAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCAACACTGGGAACCCAACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGTGCGAGGCGAGCTTCTGAACCTTTTGGAGTGGTCCTCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCAACACTGGGAACCCAACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGTGCGAGNNNNNNNNNNNNNNNTTTTGGAGTGGTNNNCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGSELKKPGASVKVSCKASGYTFTSYAMNWVRQAPGQGLEWMGWINTNTGNPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCARRASEPFGVVLNWFDPWGQGTLVTVSS | QVQLVQSGSELKKPGASVKVSCKASGYTFTSYAMNWVRQAPGQGLEWMGWINTNTGNPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCAXXXXXXFGVVXNWFDPWGQGTLVTVSS | 1 | 293 | 309.0 | 320.0 | 324 | 373 | CAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCAACACTGGGAACCCAACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGTGCGAG | QVQLVQSGSELKKPGASVKVSCKASGYTFTSYAMNWVRQAPGQGLEWMGWINTNTGNPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCA | CAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCAACACTGGGAACCCAACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGTGCGAG | QVQLVQSGSELKKPGASVKVSCKASGYTFTSYAMNWVRQAPGQGLEWMGWINTNTGNPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCA | TTTTGGAGTGGT | FGVV | TTTTGGAGTGGT | FGVV | CAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | CAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | CAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCT | QVQLVQSGSELKKPGASVKVSCKAS | GGATACACCTTCACTAGCTATGCT | GYTFTSYA | ATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGG | MNWVRQAPGQGLEWMGW | ATCAACACCAACACTGGGAACCCA | INTNTGNP | ACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGT | TYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGGCGAGCTTCTGAACCTTTTGGAGTGGTCCTCAACTGGTTCGACCCC | ARRASEPFGVVLNWFDP | TGTGCGAGGCGAGCTTCTGAACCTTTTGGAGTGGTCCTCAACTGGTTCGACCCCTGG | 57.0 | CARRASEPFGVVLNWFDPW | 19.0 | 458.363 | 23.76 | 96.822 | 106S293M151S3N | 414S10N12M124S9N | 429S1N50M71S | 6.695e-131 | 0.01734 | 3.822e-24 | 100.0 | 100.0 | 100.0 | 107 | 399 | 1 | 293 | 415.0 | 426.0 | 11.0 | 22.0 | 430 | 479 | 2 | 51 | 107 | 181 | 182 | 205 | 206 | 256 | 257 | 280 | 281 | 394 | 446.0 | 478.0 | 395.0 | 445.0 | GCGAGCTTCTGAACC | 15 | CCT | 3.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'S', '11 ': 'E', '12 ': 'L', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'T', '59 ': 'N', '62 ': 'T', '63 ': 'G', '64 ': 'N', '65 ': 'P'}, 'fwh3': {'66 ': 'T', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'G', '71 ': 'F', '72 ': 'T', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'V', '78 ': 'F', '79 ': 'S', '80 ': 'L', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'V', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'R', '108 ': 'A', '109 ': 'S', '110 ': 'E', '111 ': 'P', '111A': 'F', '111B': 'G', '112B': 'V', '112A': 'V', '112 ': 'L', '113 ': 'N', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCAGCGTCCAACTA-1_contig_2 | AGTCTGGGCCTAAGGAAGCAGCACTGGTGGTGCCTCAGCCATGGCCTGGACCGTTCTCCTCCTCGGCCTCCTCTCTCACTGCACAGGCTCTGTGACCTCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-21*02 | null | IGLJ2*01 | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHVVFGGGTKLTVL | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHVVFGGGTKLTVL | 1 | 288 | null | null | 289 | 325 | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCAT | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDH | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCAT | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDH | null | null | null | null | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAAC | SYVLTQPPSVSVAPGQTARITCGGN | AACATTGGAAGTAAAAGT | NIGSKS | GTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTAT | VHWYQQKPGQAPVLVVY | GATGATAGC | DDS | GACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGT | DRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGGTGTGGGATAGTAGTAGTGATCATGTGGTA | QVWDSSSDHVV | TGTCAGGTGTGGGATAGTAGTAGTGATCATGTGGTATTC | 39.0 | CQVWDSSSDHVVF | 13.0 | 450.572 | null | 71.827 | 97S288M248S2N | null | 385S1N37M211S | 1.7090000000000002e-128 | null | 1.475e-16 | 100.0 | null | 100.0 | 98 | 385 | 1 | 288 | null | null | null | null | 386 | 422 | 2 | 38 | 98 | 172 | 173 | 190 | 191 | 241 | 242 | 250 | 251 | 358 | 392.0 | 421.0 | 359.0 | 391.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'A', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'G', '25 ': 'G', '26 ': 'N'}, 'cdrl1': {'27 ': 'N', '28 ': 'I', '29 ': 'G', '36 ': 'S', '37 ': 'K', '38 ': 'S'}, 'fwl2': {'39 ': 'V', '40 ': 'H', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'V', '55 ': 'Y'}, 'cdrl2': {'56 ': 'D', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'D', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'G', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'V', '107 ': 'W', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'S', '114 ': 'D', '115 ': 'H', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCAGCGTCGCGAAA-1_contig_2 | AGTGACTCCTGTGCCCCACCATGGACACACTTTGCTCCACGCTCCTGCTGCTGACCATCCCTTCATGGGTCTTGTCCCAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGAATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACATTCGAATCACAGGGGTCAGTGGCTGGTATTAAGGGGGTTGGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV2-5*01 | IGHD6-19*01 | IGHJ3*02 | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGAATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACATTCGAATCACAGGGGTCAGTGGCTGGTATTAAGGGGGTTGGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGAATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACANNNNNNNNNNNNNNNNCAGTGGCTGGTANNNNNNNNNNNNGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWNDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAHSNHRGQWLVLRGLDAFDIWGQGTMVTVSS | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWNDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAXXXXXXQWLVXXXXDAFDIWGQGTMVTVSS | 1 | 296 | 313.0 | 324.0 | 337 | 385 | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGAATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACA | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWNDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCA | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGAATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACA | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWNDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCA | CAGTGGCTGGTA | QWLV | CAGTGGCTGGTA | QWLV | GATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | GATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCT | QITLKESGPTLVKPTQTLTLTCTFS | GGGTTCTCACTCAGCACTAGTGGAGTGGGT | GFSLSTSGVG | GTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTC | VGWIRQPPGKALEWLAL | ATTTATTGGAATGATGATAAG | IYWNDDK | CGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGT | RYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCACATTCGAATCACAGGGGTCAGTGGCTGGTATTAAGGGGGTTGGATGCTTTTGATATC | AHSNHRGQWLVLRGLDAFDI | TGTGCACATTCGAATCACAGGGGTCAGTGGCTGGTATTAAGGGGGTTGGATGCTTTTGATATCTGG | 66.0 | CAHSNHRGQWLVLRGLDAFDIW | 22.0 | 463.037 | 23.76 | 94.899 | 77S296M160S5N | 389S8N12M132S1N | 413S1N49M71S | 2.5370000000000002e-132 | 0.01679 | 1.4029999999999998e-23 | 100.0 | 100.0 | 100.0 | 78 | 373 | 1 | 296 | 390.0 | 401.0 | 9.0 | 20.0 | 414 | 462 | 2 | 50 | 78 | 152 | 153 | 182 | 183 | 233 | 234 | 254 | 255 | 368 | 429.0 | 461.0 | 369.0 | 428.0 | TTCGAATCACAGGGGT | 16 | TTAAGGGGGTTG | 12.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'I', '3 ': 'T', '4 ': 'L', '5 ': 'K', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'T', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'T', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'T', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'F', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'S', '30 ': 'L', '31 ': 'S', '34 ': 'T', '35 ': 'S', '36 ': 'G', '37 ': 'V', '38 ': 'G'}, 'fwh2': {'39 ': 'V', '40 ': 'G', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'L', '54 ': 'A', '55 ': 'L'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'W', '59 ': 'N', '63 ': 'D', '64 ': 'D', '65 ': 'K'}, 'fwh3': {'66 ': 'R', '67 ': 'Y', '68 ': 'S', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'L', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'K', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'V', '88 ': 'V', '89 ': 'L', '90 ': 'T', '91 ': 'M', '92 ': 'T', '93 ': 'N', '94 ': 'M', '95 ': 'D', '96 ': 'P', '97 ': 'V', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'H', '107 ': 'S', '108 ': 'N', '109 ': 'H', '110 ': 'R', '111 ': 'G', '111A': 'Q', '111B': 'W', '111C': 'L', '112D': 'V', '112C': 'L', '112B': 'R', '112A': 'G', '112 ': 'L', '113 ': 'D', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCAGCGTCGCGAAA-1_contig_1 | GAGGAGTCAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCTCCCGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ5*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCTCCCGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCNNNNGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTLPITFGQGTRLEIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTXXITFGQGTRLEIK | 1 | 283 | null | null | 288 | 325 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYST | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYST | null | null | null | null | GATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | GATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCCAAGGGACACGACTGGAGATTAAA | FGQGTRLEIK | CAACAGAGTTACAGTACCCTCCCGATCACC | QQSYSTLPIT | TGTCAACAGAGTTACAGTACCCTCCCGATCACCTTC | 36.0 | CQQSYSTLPITF | 12.0 | 442.782 | null | 73.749 | 94S283M178S4N | null | 381S38M136S | 3.313e-126 | null | 3.402e-17 | 100.0 | null | 100.0 | 95 | 377 | 1 | 283 | null | null | null | null | 382 | 419 | 1 | 38 | 95 | 172 | 173 | 190 | 191 | 241 | 242 | 250 | 251 | 358 | 389.0 | 418.0 | 359.0 | 388.0 | TCCC | 4 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '113 ': 'T', '114 ': 'L', '115 ': 'P', '116 ': 'I', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'R', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCAGCGTGATGATA-1_contig_2 | GAGCTCTGGGAGAGGAGCCCAGCACTAGAAGTCGGCGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGATGCTAGCAGTGGCTGGTACCCCCGCGGGCCTTTTGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30*18 | IGHD6-19*01 | IGHJ4*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGATGCTAGCAGTGGCTGGTACCCCCGCGGGCCTTTTGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGANNNTAGCAGTGGCTGGTACNNNNNNNNNNNNTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDASSGWYPRGPFGYWGQGTLVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXSSGWYXXXXFDYWGQGTLVTVSS | 1 | 296 | 300.0 | 315.0 | 328 | 370 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | TAGCAGTGGCTGGTAC | SSGWY | TAGCAGTGGCTGGTAC | SSGWY | TTTGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FGYWGQGTLVTVSS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGGC | GFTFSSYG | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGTAATAAA | ISYDGSNK | TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAAAGATGCTAGCAGTGGCTGGTACCCCCGCGGGCCTTTTGGCTAC | AKDASSGWYPRGPFGY | TGTGCGAAAGATGCTAGCAGTGGCTGGTACCCCCGCGGGCCTTTTGGCTACTGG | 54.0 | CAKDASSGWYPRGPFGYW | 18.0 | 463.037 | 31.45 | 77.595 | 137S296M145S | 436S5N16M126S | 464S5N43M71S | 2.7470000000000002e-132 | 8.827e-05 | 2.467e-18 | 100.0 | 100.0 | 97.674 | 138 | 433 | 1 | 296 | 437.0 | 452.0 | 6.0 | 21.0 | 465 | 507 | 6 | 48 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 474.0 | 506.0 | 426.0 | 473.0 | TGC | 3 | CCCCGCGGGCCT | 12.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'D', '108 ': 'A', '109 ': 'S', '110 ': 'S', '111 ': 'G', '111A': 'W', '112B': 'Y', '112A': 'P', '112 ': 'R', '113 ': 'G', '114 ': 'P', '115 ': 'F', '116 ': 'G', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCAGCGTGATGATA-1_contig_1 | ATGAGCAAAACTGACAAGTCAAGGCAGGAAGATGTTGCCATCACAACTCATTGGGTTTCTGCTGCTCTGGGTTCCAGCCTCCAGGGGTGAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATTGGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCTTCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAACGTATTACTGTCATCAGAGTAGTAGTTTACCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV6-21*01 | null | IGKJ4*01 | GAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATTGGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCTTCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAACGTATTACTGTCATCAGAGTAGTAGTTTACCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATTGGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCTTCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAACGTATTACTGTCATCAGAGTAGTAGTTTACCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | EIVLTQSPDFQSVTPKEKVTITCRASQSIGSSLHWYQQKPDQSPKLLIKYASQSFSGVPSRFSGSGSGTDFTLTINSLEAEDAATYYCHQSSSLPLTFGGGTKVEIK | EIVLTQSPDFQSVTPKEKVTITCRASQSIGSSLHWYQQKPDQSPKLLIKYASQSFSGVPSRFSGSGSGTDFTLTINSLEAEDAATYYCHQSSSLPLTFGGGTKVEIK | 1 | 284 | null | null | 285 | 322 | GAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATTGGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCTTCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAACGTATTACTGTCATCAGAGTAGTAGTTTACC | EIVLTQSPDFQSVTPKEKVTITCRASQSIGSSLHWYQQKPDQSPKLLIKYASQSFSGVPSRFSGSGSGTDFTLTINSLEAEDAATYYCHQSSSLP | GAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATTGGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCTTCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAACGTATTACTGTCATCAGAGTAGTAGTTTACC | EIVLTQSPDFQSVTPKEKVTITCRASQSIGSSLHWYQQKPDQSPKLLIKYASQSFSGVPSRFSGSGSGTDFTLTINSLEAEDAATYYCHQSSSLP | null | null | null | null | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGT | EIVLTQSPDFQSVTPKEKVTITCRAS | CAGAGCATTGGTAGTAGC | QSIGSS | TTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAG | LHWYQQKPDQSPKLLIK | TATGCTTCC | YAS | CAGTCCTTCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAACGTATTACTGT | QSFSGVPSRFSGSGSGTDFTLTINSLEAEDAATYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CATCAGAGTAGTAGTTTACCGCTCACT | HQSSSLPLT | TGTCATCAGAGTAGTAGTTTACCGCTCACTTTC | 33.0 | CHQSSSLPLTF | 11.0 | 444.34 | null | 73.749 | 88S284M174S3N | null | 372S38M136S | 1.106e-126 | null | 3.346e-17 | 100.0 | null | 100.0 | 89 | 372 | 1 | 284 | null | null | null | null | 373 | 410 | 1 | 38 | 89 | 166 | 167 | 184 | 185 | 235 | 236 | 244 | 245 | 352 | 380.0 | 409.0 | 353.0 | 379.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'D', '10 ': 'F', '11 ': 'Q', '12 ': 'S', '13 ': 'V', '14 ': 'T', '15 ': 'P', '16 ': 'K', '17 ': 'E', '18 ': 'K', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'G', '37 ': 'S', '38 ': 'S'}, 'fwk2': {'39 ': 'L', '40 ': 'H', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'D', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'K'}, 'cdrk2': {'56 ': 'Y', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'Q', '67 ': 'S', '68 ': 'F', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'A', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'H', '106 ': 'Q', '107 ': 'S', '108 ': 'S', '109 ': 'S', '114 ': 'L', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCAGCGTGCAACGA-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAACCCCATATAGTGGCTACGACAATGGGTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD5-12*01 | IGHJ5*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAACCCCATATAGTGGCTACGACAATGGGTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAANNNNNATATAGTGGCTACGANNNNNNNTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKTPYSGYDNGWFDPWGQGTLVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXYSGYXXXWFDPWGQGTLVTVSS | 1 | 294 | 300.0 | 314.0 | 322 | 367 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | ATATAGTGGCTACGA | YSGY | ATATAGTGGCTACGA | YSGY | TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAAAACCCCATATAGTGGCTACGACAATGGGTGGTTCGACCCC | AKTPYSGYDNGWFDP | TGTGCGAAAACCCCATATAGTGGCTACGACAATGGGTGGTTCGACCCCTGG | 51.0 | CAKTPYSGYDNGWFDPW | 17.0 | 459.921 | 29.528 | 89.131 | 136S294M144S2N | 435S4N15M124S4N | 457S5N46M71S | 2.365e-131 | 0.0003323 | 8.247999999999999e-22 | 100.0 | 100.0 | 100.0 | 137 | 430 | 1 | 294 | 436.0 | 450.0 | 5.0 | 19.0 | 458 | 503 | 6 | 51 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 470.0 | 502.0 | 425.0 | 469.0 | ACCCC | 5 | CAATGGG | 7.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'T', '108 ': 'P', '109 ': 'Y', '110 ': 'S', '111 ': 'G', '111A': 'Y', '112A': 'D', '112 ': 'N', '113 ': 'G', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCAGCGTGCAACGA-1_contig_1 | AGGCTGATCACACCCTGTGCAGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTTCCAGATGCGACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCTGGGCCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-12*01 | null | IGKJ4*01 | GACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCTGGGCCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCNNNNNCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFLGLTFGGGTKVEIK | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFXXLTFGGGTKVEIK | 1 | 283 | null | null | 289 | 325 | GACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCC | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSF | GACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCC | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSF | null | null | null | null | CTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | CTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGT | DIQMTQSPSSVSASVGDRVTITCRAS | CAGGGTATTAGCAGCTGG | QGISSW | TTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAACAGGCTAACAGTTTCCTGGGCCTCACT | QQANSFLGLT | TGTCAACAGGCTAACAGTTTCCTGGGCCTCACTTTC | 36.0 | CQQANSFLGLTF | 12.0 | 442.782 | null | 71.827 | 113S283M178S4N | null | 401S1N37M136S | 3.414e-126 | null | 1.335e-16 | 100.0 | null | 100.0 | 114 | 396 | 1 | 283 | null | null | null | null | 402 | 438 | 2 | 38 | 114 | 191 | 192 | 209 | 210 | 260 | 261 | 269 | 270 | 377 | 408.0 | 437.0 | 378.0 | 407.0 | TGGGC | 5 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'W'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'A', '108 ': 'N', '109 ': 'S', '113 ': 'F', '114 ': 'L', '115 ': 'G', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCAGCGTGCACCAC-1_contig_2 | ACAACCACACCCCTCCTAAGAAGAAGCCCCTAGACCACAGCTCCACACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCAACAGGTGCCCACTCCCAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCAACACTGGGAACCCAACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGTGCGAGGCGGAACACGCACCAATATTGTAGTGGTGGTAGCTGCTACTTCCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV7-4-1*02 | IGHD2-15*01 | IGHJ4*02 | CAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCAACACTGGGAACCCAACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGTGCGAGGCGGAACACGCACCAATATTGTAGTGGTGGTAGCTGCTACTTCCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCAACACTGGGAACCCAACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGTGCGAGNNNNNNNNNNNNNNNATATTGTAGTGGTGGTAGCTGCTACTNNNNTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGSELKKPGASVKVSCKASGYTFTSYAMNWVRQAPGQGLEWMGWINTNTGNPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCARRNTHQYCSGGSCYFPDYWGQGTLVTVSS | QVQLVQSGSELKKPGASVKVSCKASGYTFTSYAMNWVRQAPGQGLEWMGWINTNTGNPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCAXXXXXXYCSGGSCYXXDYWGQGTLVTVSS | 1 | 293 | 309.0 | 334.0 | 339 | 379 | CAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCAACACTGGGAACCCAACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGTGCGAG | QVQLVQSGSELKKPGASVKVSCKASGYTFTSYAMNWVRQAPGQGLEWMGWINTNTGNPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCA | CAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCAACACTGGGAACCCAACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGTGCGAG | QVQLVQSGSELKKPGASVKVSCKASGYTFTSYAMNWVRQAPGQGLEWMGWINTNTGNPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCA | ATATTGTAGTGGTGGTAGCTGCTACT | YCSGGSCY | ATATTGTAGTGGTGGTAGCTGCTACT | YCSGGSCY | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCT | QVQLVQSGSELKKPGASVKVSCKAS | GGATACACCTTCACTAGCTATGCT | GYTFTSYA | ATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGG | MNWVRQAPGQGLEWMGW | ATCAACACCAACACTGGGAACCCA | INTNTGNP | ACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGT | TYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGGCGGAACACGCACCAATATTGTAGTGGTGGTAGCTGCTACTTCCCTGACTAC | ARRNTHQYCSGGSCYFPDY | TGTGCGAGGCGGAACACGCACCAATATTGTAGTGGTGGTAGCTGCTACTTCCCTGACTACTGG | 63.0 | CARRNTHQYCSGGSCYFPDYW | 21.0 | 458.363 | 50.677 | 79.518 | 106S293M157S3N | 414S3N26M116S2N | 444S7N41M71S | 6.772e-131 | 1.383e-10 | 6.254e-19 | 100.0 | 100.0 | 100.0 | 107 | 399 | 1 | 293 | 415.0 | 440.0 | 4.0 | 29.0 | 445 | 485 | 8 | 48 | 107 | 181 | 182 | 205 | 206 | 256 | 257 | 280 | 281 | 394 | 452.0 | 484.0 | 395.0 | 451.0 | GCGGAACACGCACCA | 15 | TCCC | 4.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'S', '11 ': 'E', '12 ': 'L', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'T', '59 ': 'N', '62 ': 'T', '63 ': 'G', '64 ': 'N', '65 ': 'P'}, 'fwh3': {'66 ': 'T', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'G', '71 ': 'F', '72 ': 'T', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'V', '78 ': 'F', '79 ': 'S', '80 ': 'L', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'V', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'R', '108 ': 'N', '109 ': 'T', '110 ': 'H', '111 ': 'Q', '111A': 'Y', '111B': 'C', '111C': 'S', '112C': 'G', '112B': 'G', '112A': 'S', '112 ': 'C', '113 ': 'Y', '114 ': 'F', '115 ': 'P', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCAGCGTGCACCAC-1_contig_1 | GAAGAGAGGCCTGGGGAGCCCAGCTGTGCTGTGGGCTCAGGAGGCAGAGCTCTGGGAATCTCACCATGGCCTGGACCCCTCTCCTGCTCCCCCTCCTCACTTTCTGCACAGTCTCTGAGGCCTCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAGGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-10*01 | null | IGLJ3*02 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAGGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCANGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPPSVSVSPGQTARITCSGDALPKKYAYWYQQKSGQAPVLVIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCYSGVFGGGTKLTVL | SYELTQPPSVSVSPGQTARITCSGDALPKKYAYWYQQKSGQAPVLVIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCYSXVFGGGTKLTVL | 1 | 267 | null | null | 269 | 304 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCA | SYELTQPPSVSVSPGQTARITCSGDALPKKYAYWYQQKSGQAPVLVIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCYS | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCA | SYELTQPPSVSVSPGQTARITCSGDALPKKYAYWYQQKSGQAPVLVIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCYS | null | null | null | null | GGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTARITCSGD | GCATTGCCAAAAAAATAT | ALPKKY | GCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTAT | AYWYQQKSGQAPVLVIY | GAGGACAGC | EDS | AAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGT | KRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | TACTCAGGGGTG | YSGV | TGTTACTCAGGGGTGTTC | 18.0 | CYSGVF | 6.0 | 417.852 | null | 69.904 | 122S267M248S23N | null | 390S2N36M211S | 1.217e-118 | null | 5.627e-16 | 100.0 | null | 100.0 | 123 | 389 | 1 | 267 | null | null | null | null | 391 | 426 | 3 | 38 | 123 | 197 | 198 | 215 | 216 | 266 | 267 | 275 | 276 | 383 | 396.0 | 425.0 | 384.0 | 395.0 | G | 1 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'A', '28 ': 'L', '29 ': 'P', '36 ': 'K', '37 ': 'K', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'Y', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'S', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'S', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'M', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'A', '95 ': 'Q', '96 ': 'V', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Y', '106 ': 'S', '116 ': 'G', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCAGCTCACATGCA-1_contig_2 | GGGAGAGGAGCCCAGCACTGGGATTCCGAGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTTGGCTGAGCTGGGTTTTCCTTGTTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGGAGTATTACTATGGTTCGGGGAAACATAAATCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-53*01 | IGHD3-10*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGGAGTATTACTATGGTTCGGGGAAACATAAATCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGNNGTATTACTATGGTTCGGGGANNNNNNNNNNNCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARSITMVRGNINPFDYWGQGTLVTVSS | EVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAXXITMVRGXXXXFDYWGQGTLVTVSS | 1 | 290 | 293.0 | 312.0 | 324 | 367 | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAG | EVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAG | EVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | GTATTACTATGGTTCGGGGA | ITMVRG | GTATTACTATGGTTCGGGGA | ITMVRG | CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLIQPGGSLRLSCAAS | GGGTTCACCGTCAGTAGCAACTAC | GFTVSSNY | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTT | MSWVRQAPGKGLEWVSV | ATTTATAGCGGTGGTAGCACA | IYSGGST | TACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGGAGTATTACTATGGTTCGGGGAAACATAAATCCCTTTGACTAC | ARSITMVRGNINPFDY | TGTGCGAGGAGTATTACTATGGTTCGGGGAAACATAAATCCCTTTGACTACTGG | 54.0 | CARSITMVRGNINPFDYW | 18.0 | 453.689 | 39.141 | 85.286 | 130S290M148S3N | 422S20M126S11N | 453S4N44M71S | 1.768e-129 | 4.197e-07 | 1.173e-20 | 100.0 | 100.0 | 100.0 | 131 | 420 | 1 | 290 | 423.0 | 442.0 | 1.0 | 20.0 | 454 | 497 | 5 | 48 | 131 | 205 | 206 | 229 | 230 | 280 | 281 | 301 | 302 | 415 | 464.0 | 496.0 | 416.0 | 463.0 | GA | 2 | AACATAAATCC | 11.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'I', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'V', '35 ': 'S', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'S', '59 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'S', '108 ': 'I', '109 ': 'T', '110 ': 'M', '111 ': 'V', '111A': 'R', '112B': 'G', '112A': 'N', '112 ': 'I', '113 ': 'N', '114 ': 'P', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCAGCTCACATGCA-1_contig_1 | AGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAGATGTGTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGTTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCCTCCGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1D-8*01 | null | IGKJ1*01 | GTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGTTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCCTCCGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGTTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCCTCCGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | VIWMTQSPSLLSASTGDRVTISCRMSQGISSYLAWYQQKPGKAPELLIYAASTLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYCQQYYSFPPTFGQGTKVEIK | VIWMTQSPSLLSASTGDRVTISCRMSQGISSYLAWYQQKPGKAPELLIYAASTLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYCQQYYSFPPTFGQGTKVEIK | 1 | 287 | null | null | 288 | 322 | GTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGTTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCCTCC | VIWMTQSPSLLSASTGDRVTISCRMSQGISSYLAWYQQKPGKAPELLIYAASTLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYCQQYYSFPP | GTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGTTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCCTCC | VIWMTQSPSLLSASTGDRVTISCRMSQGISSYLAWYQQKPGKAPELLIYAASTLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYCQQYYSFPP | null | null | null | null | GACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGT | VIWMTQSPSLLSASTGDRVTISCRMS | CAGGGCATTAGCAGTTAT | QGISSY | TTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTAT | LAWYQQKPGKAPELLIY | GCTGCATCC | AAS | ACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGTTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGT | TLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAACAGTATTATAGTTTCCCTCCGACG | QQYYSFPPT | TGTCAACAGTATTATAGTTTCCCTCCGACGTTC | 33.0 | CQQYYSFPPTF | 11.0 | 449.014 | null | 67.981 | 93S287M171S | null | 380S3N35M136S | 4.3730000000000004e-128 | null | 1.84e-15 | 100.0 | null | 100.0 | 94 | 380 | 1 | 287 | null | null | null | null | 381 | 415 | 4 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 385.0 | 414.0 | 358.0 | 384.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'V', '2 ': 'I', '3 ': 'W', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'L', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'T', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'M', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'E', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'C', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'Y', '109 ': 'S', '114 ': 'F', '115 ': 'P', '116 ': 'P', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCAGCTCAGCAACT-1_contig_2 | AGCTCTGGGAGAGGAGCCCCAGCCGTGAGATTCCCAGGAGTTTCCACTTGGTGATCAGCACTGAACACAGACCACCAACCATGGAGTTTGGGCTTAGCTGGGTTTTCCTTGTTGCTATTTTAAAAGGTGTCCAATGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGTTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAGATCGTGGATACAGTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-49*05 | IGHD5-18*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGTTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAGATCGTGGATACAGTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGTTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAGANNGTGGATACAGTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVKPGRSLRLSCTASGFTFGDYAMSWFRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTRDRGYSDYWGQGTLVTVSS | EVQLVESGGGLVKPGRSLRLSCTASGFTFGDYAMSWFRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTRXXGYSDYWGQGTLVTVSS | 1 | 302 | 305.0 | 314.0 | 315 | 355 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGTTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAGA | EVQLVESGGGLVKPGRSLRLSCTASGFTFGDYAMSWFRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGTTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAGA | EVQLVESGGGLVKPGRSLRLSCTASGFTFGDYAMSWFRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTR | GTGGATACAG | GY | GTGGATACAG | GY | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCT | EVQLVESGGGLVKPGRSLRLSCTAS | GGATTCACCTTTGGTGATTATGCT | GFTFGDYA | ATGAGCTGGTTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTC | MSWFRQAPGKGLEWVGF | ATTAGAAGCAAAGCTTATGGTGGGACAACA | IRSKAYGGTT | GAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGT | EYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | ACTAGAGATCGTGGATACAGTGACTAC | TRDRGYSDY | TGTACTAGAGATCGTGGATACAGTGACTACTGG | 33.0 | CTRDRGYSDYW | 11.0 | 472.386 | 19.914 | 79.518 | 137S302M124S | 441S10M112S10N | 451S7N41M71S | 4.122e-135 | 0.2552 | 6.335e-19 | 100.0 | 100.0 | 100.0 | 138 | 439 | 1 | 302 | 442.0 | 451.0 | 1.0 | 10.0 | 452 | 492 | 8 | 48 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 317 | 318 | 431 | 459.0 | 491.0 | 432.0 | 458.0 | TC | 2 | null | 0.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'G', '36 ': 'D', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'F', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'G', '55 ': 'F'}, 'cdrh2': {'56 ': 'I', '57 ': 'R', '58 ': 'S', '59 ': 'K', '60 ': 'A', '61 ': 'Y', '62 ': 'G', '63 ': 'G', '64 ': 'T', '65 ': 'T'}, 'fwh3': {'66 ': 'E', '67 ': 'Y', '68 ': 'A', '69 ': 'A', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'D', '83 ': 'S', '84 ': 'K', '85 ': 'S', '86 ': 'I', '87 ': 'A', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'T', '106 ': 'R', '107 ': 'D', '108 ': 'R', '109 ': 'G', '114 ': 'Y', '115 ': 'S', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCAGCTCAGCAACT-1_contig_1 | GGGGAGAAGTCTCTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCTGCTCAGCTCCTGGGACTCCTGCTGCTCTGGCTCCCAGATACCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-27*01 | null | IGKJ4*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQGISNYLAWYQQKPGKVPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQKYNSAPLTFGGGTKVEIK | DIQMTQSPSSLSASVGDRVTITCRASQGISNYLAWYQQKPGKVPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQKYNSAPLTFGGGTKVEIK | 1 | 284 | null | null | 285 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCC | DIQMTQSPSSLSASVGDRVTITCRASQGISNYLAWYQQKPGKVPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQKYNSAP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCC | DIQMTQSPSSLSASVGDRVTITCRASQGISNYLAWYQQKPGKVPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQKYNSAP | null | null | null | null | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGGGCATTAGCAATTAT | QGISNY | TTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTAT | LAWYQQKPGKVPKLLIY | GCTGCATCC | AAS | ACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGT | TLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAAAAGTATAACAGTGCCCCGCTCACT | QKYNSAPLT | TGTCAAAAGTATAACAGTGCCCCGCTCACTTTC | 33.0 | CQKYNSAPLTF | 11.0 | 444.34 | null | 73.749 | 97S284M174S3N | null | 381S38M136S | 1.125e-126 | null | 3.402e-17 | 100.0 | null | 100.0 | 98 | 381 | 1 | 284 | null | null | null | null | 382 | 419 | 1 | 38 | 98 | 175 | 176 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 389.0 | 418.0 | 362.0 | 388.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'V', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'K', '107 ': 'Y', '108 ': 'N', '109 ': 'S', '114 ': 'A', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCAGCTCCCTAACC-1_contig_2 | AGTGCTTTCTGAGAGTCATGGACCTCCTGCACAAGAACATGAAACACCTGTGGTTCTTCCTCCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCCCCAGGTGTTTGGGGAGGTCCCGATGCGCCGAGCTCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-34*01 | IGHD3-10*02 | IGHJ4*02 | CAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCCCCAGGTGTTTGGGGAGGTCCCGATGCGCCGAGCTCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGNNNNNNNTGTTCGGGGAGNNNNNNNNNNNNNNNNNNNGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGPRCLGRSRCAELDYWGQGTLVTVSS | QVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGXXCSGXXXXXXXDYWGQGTLVTVSS | 1 | 293 | 301.0 | 311.0 | 331 | 370 | CAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGG | QVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARG | CAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGG | QVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARG | TGTTTGGGGAG | CLG | TGTTCGGGGAG | CSG | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTAT | QVQLQQWGAGLLKPSETLSLTCAVY | GGTGGGTCCTTCAGTGGTTACTAC | GGSFSGYY | TGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAA | WSWIRQPPGKGLEWIGE | ATCAATCATAGTGGAAGCACC | INHSGST | AACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGGCCCCAGGTGTTTGGGGAGGTCCCGATGCGCCGAGCTCGACTAC | ARGPRCLGRSRCAELDY | TGTGCGAGAGGCCCCAGGTGTTTGGGGAGGTCCCGATGCGCCGAGCTCGACTACTGG | 57.0 | CARGPRCLGRSRCAELDYW | 19.0 | 458.363 | 16.069 | 77.595 | 95S293M148S | 395S9N11M130S10N | 425S8N40M71S | 6.515e-131 | 3.489 | 2.284e-18 | 100.0 | 90.909 | 100.0 | 96 | 388 | 1 | 293 | 396.0 | 406.0 | 10.0 | 20.0 | 426 | 465 | 9 | 48 | 96 | 170 | 171 | 194 | 195 | 245 | 246 | 266 | 267 | 380 | 432.0 | 464.0 | 381.0 | 431.0 | CCCCAGG | 7 | GTCCCGATGCGCCGAGCTC | 19.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'Q', '7 ': 'W', '8 ': 'G', '9 ': 'A', '11 ': 'G', '12 ': 'L', '13 ': 'L', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'A', '25 ': 'V', '26 ': 'Y'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'F', '35 ': 'S', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'E'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'H', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'P', '109 ': 'R', '110 ': 'C', '111 ': 'L', '111A': 'G', '111B': 'R', '112B': 'S', '112A': 'R', '112 ': 'C', '113 ': 'A', '114 ': 'E', '115 ': 'L', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCAGCTCCCTAACC-1_contig_1 | AGCTTCAGCTGTGGTAGAGAAGACAGGATTCAGGACAATCTCCAGCATGGCCGGCTTCCCTCTCCTCCTCACCCTCCTCACTCACTGTGCAGGGTCCTGGGCCCAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGTCGGGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAGGTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-47*01 | null | IGLJ1*01 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGTCGGGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGTCNNGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSGRVFGTGTKVTVL | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSGXVFGTGTKVTVL | 1 | 295 | null | null | 298 | 331 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGTC | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATTATGTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGGAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAGTGGTC | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSG | null | null | null | null | GTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | VFGTGTKVTVL | GTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | VFGTGTKVTVL | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGC | QSVLTQPPSASGTPGQRVTISCSGS | AGCTCCAACATCGGAAGTAATTAT | SSNIGSNY | GTATACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTAT | VYWYQQLPGTAPKLLIY | AGGAATAAT | RNN | CAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCGGTCCGAGGATGAGGCTGATTATTACTGT | QRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYC | TTCGGAACTGGGACCAAGGTCACCGTCCTA | FGTGTKVTVL | GCAGCATGGGATGACAGCCTGAGTGGTCGGGTC | AAWDDSLSGRV | TGTGCAGCATGGGATGACAGCCTGAGTGGTCGGGTCTTC | 39.0 | CAAWDDSLSGRVF | 13.0 | 461.479 | null | 66.059 | 103S295M247S1N | null | 400S4N34M211S | 9.077e-132 | null | 8.192e-15 | 100.0 | null | 100.0 | 104 | 398 | 1 | 295 | null | null | null | null | 401 | 434 | 5 | 38 | 104 | 178 | 179 | 202 | 203 | 253 | 254 | 262 | 263 | 370 | 404.0 | 433.0 | 371.0 | 403.0 | GG | 2 | null | null | GTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'A', '12 ': 'S', '13 ': 'G', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'Y', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'R', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'Q', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'A', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'A', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'D', '110 ': 'S', '113 ': 'L', '114 ': 'S', '115 ': 'G', '116 ': 'R', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'T', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCAGCTCCTATTCA-1_contig_2 | AGCTCTGGGAGAAGAGCCCCAGCCCCAGAATTCCCAGGAGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTTGTTGCTATTATAAAAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCAAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAAATATGGGAGCTAAAGCCTCTGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-11*01 | IGHD1-26*01 | IGHJ4*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCAAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAAATATGGGAGCTAAAGCCTCTGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCAAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGANNNNTGGGAGCTANNNNNNNNNACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVESGGGLVKPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARNMGAKASDWGQGTLVTVSS | QVQLVESGGGLVKPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARXXGAXXXXWGQGTLVTVSS | 1 | 294 | 299.0 | 307.0 | 317 | 352 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCAAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGA | QVQLVESGGGLVKPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCAAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGA | QVQLVESGGGLVKPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | TGGGAGCTA | GA | TGGGAGCTA | GA | ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WGQGTLVTVSS | ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WGQGTLVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCAAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACCTTCAGTGACTACTAC | GFTFSDYY | ATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATAC | MSWIRQAPGKGLEWVSY | ATTAGTAGTAGTGGTAGTACCATA | ISSSGSTI | TACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGT | YYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAAATATGGGAGCTAAAGCCTCTGAC | ARNMGAKASD | TGTGCGAGAAATATGGGAGCTAAAGCCTCTGACTGG | 36.0 | CARNMGAKASDW | 12.0 | 459.921 | 17.992 | 69.904 | 137S294M129S2N | 435S7N9M116S4N | 453S12N36M71S | 2.317e-131 | 0.9623 | 4.935e-16 | 100.0 | 100.0 | 100.0 | 138 | 431 | 1 | 294 | 436.0 | 444.0 | 8.0 | 16.0 | 454 | 489 | 13 | 48 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 456.0 | 488.0 | 426.0 | 455.0 | AATA | 4 | AAGCCTCTG | 9.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'D', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'S', '59 ': 'S', '62 ': 'G', '63 ': 'S', '64 ': 'T', '65 ': 'I'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'N', '108 ': 'M', '109 ': 'G', '113 ': 'A', '114 ': 'K', '115 ': 'A', '116 ': 'S', '117 ': 'D'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCAGCTCCTATTCA-1_contig_1 | GTGCAGGAGTCAGTCCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAGATGTGACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCCCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-9*01 | null | IGKJ4*01 | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCCCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCNCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPLTFGGGTKVEIK | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPLTFGGGTKVEIK | 1 | 284 | null | null | 286 | 322 | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCC | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYP | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCC | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYP | null | null | null | null | CTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | CTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQLTQSPSFLSASVGDRVTITCRAS | CAGGGCATTAGCAGTTAT | QGISSY | TTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | GCTGCATCC | AAS | ACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGT | TLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAACAGCTTAATAGTTACCCCCTCACT | QQLNSYPLT | TGTCAACAGCTTAATAGTTACCCCCTCACTTTC | 33.0 | CQQLNSYPLTF | 11.0 | 444.34 | null | 71.827 | 97S284M174S3N | null | 382S1N37M136S | 1.125e-126 | null | 1.29e-16 | 100.0 | null | 100.0 | 98 | 381 | 1 | 284 | null | null | null | null | 383 | 419 | 2 | 38 | 98 | 175 | 176 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 389.0 | 418.0 | 362.0 | 388.0 | C | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'F', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'L', '108 ': 'N', '109 ': 'S', '114 ': 'Y', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCAGCTCGGAATCT-1_contig_2 | GAGCTCTGGGAGAGGAGCCCAGCACTAGAAGTCGGCGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATGGGTCTTACTATGATAGTAGTGGTTATTATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-33*01 | IGHD3-22*01 | IGHJ4*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATGGGTCTTACTATGATAGTAGTGGTTATTATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGANNNNNNTTACTATGATAGTAGTGGTTATTATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDGSYYDSSGYYDYWGQGTLVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXXXYYDSSGYYDYWGQGTLVTVSS | 1 | 296 | 303.0 | 326.0 | 327 | 367 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | TTACTATGATAGTAGTGGTTATTA | YYDSSGY | TTACTATGATAGTAGTGGTTATTA | YYDSSGY | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGGC | GFTFSSYG | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATGGTATGATGGAAGTAATAAA | IWYDGSNK | TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGATGGGTCTTACTATGATAGTAGTGGTTATTATGACTAC | ARDGSYYDSSGYYDY | TGTGCGAGAGATGGGTCTTACTATGATAGTAGTGGTTATTATGACTACTGG | 51.0 | CARDGSYYDSSGYYDYW | 17.0 | 463.037 | 46.832 | 79.518 | 137S296M142S | 439S3N24M112S4N | 463S7N41M71S | 2.732e-132 | 2.057e-09 | 6.472e-19 | 100.0 | 100.0 | 100.0 | 138 | 433 | 1 | 296 | 440.0 | 463.0 | 4.0 | 27.0 | 464 | 504 | 8 | 48 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 471.0 | 503.0 | 426.0 | 470.0 | TGGGTC | 6 | null | 0.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'W', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'G', '109 ': 'S', '110 ': 'Y', '111 ': 'Y', '111A': 'D', '112A': 'S', '112 ': 'S', '113 ': 'G', '114 ': 'Y', '115 ': 'Y', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCAGCTCGGAATCT-1_contig_1 | GGGGAGGAACTGCTCAGTTAGGACCCAGACGGAACCATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACTGGAGAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-15*01 | null | IGKJ2*01 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPYTFGQGTKLEIK | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPYTFGQGTKLEIK | 1 | 284 | null | null | 285 | 322 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWP | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWP | null | null | null | null | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVMTQSPATLSVSPGERATLSCRAS | CAGAGTGTTAGCAGCAAC | QSVSSN | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | ACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGT | TRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAGCAGTATAATAACTGGCCGTACACT | QQYNNWPYT | TGTCAGCAGTATAATAACTGGCCGTACACTTTT | 33.0 | CQQYNNWPYTF | 11.0 | 444.34 | null | 73.749 | 96S284M174S3N | null | 380S1N38M136S | 1.123e-126 | null | 3.396e-17 | 100.0 | null | 100.0 | 97 | 380 | 1 | 284 | null | null | null | null | 381 | 418 | 2 | 39 | 97 | 174 | 175 | 192 | 193 | 243 | 244 | 252 | 253 | 360 | 388.0 | 417.0 | 361.0 | 387.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'N'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'N', '114 ': 'W', '115 ': 'P', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCAGCTCTCGTTTA-1_contig_2 | GAGCTCTGGGAGAGGAGCCCAGCACTAGAAGTCGGCGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATACAGCGGGACTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-33*01 | IGHD5-18*01 | IGHJ4*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATACAGCGGGACTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATACAGCNNNNNTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDTAGLDYWGQGTLVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDTAXXDYWGQGTLVTVSS | 1 | 296 | 297.0 | 302.0 | 308 | 349 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | TACAGC | TA | TACAGC | TA | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGGC | GFTFSSYG | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATGGTATGATGGAAGTAATAAA | IWYDGSNK | TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGATACAGCGGGACTTGACTAC | ARDTAGLDY | TGTGCGAGAGATACAGCGGGACTTGACTACTGG | 33.0 | CARDTAGLDYW | 11.0 | 463.037 | 12.223 | 81.44 | 137S296M124S | 433S5N6M118S9N | 444S6N42M71S | 2.657e-132 | 52.16 | 1.653e-19 | 100.0 | 100.0 | 100.0 | 138 | 433 | 1 | 296 | 434.0 | 439.0 | 6.0 | 11.0 | 445 | 486 | 7 | 48 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 453.0 | 485.0 | 426.0 | 452.0 | null | 0 | GGGAC | 5.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'W', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'T', '109 ': 'A', '114 ': 'G', '115 ': 'L', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCAGCTCTCGTTTA-1_contig_1 | GCTGTGCTGTGGGTCCAGGAGGCAGAACTCTGGGTGTCTCACCATGGCCTGGATCCCTCTACTTCTCCCCCTCCTCACTCTCTGCACAGGCTCTGAGGCCTCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-25*03 | null | IGLJ3*02 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTWVFGGGTKLTVL | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTWVFGGGTKLTVL | 1 | 286 | null | null | 287 | 322 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTT | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGT | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTT | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGT | null | null | null | null | GGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTARITCSGD | GCATTGCCAAAGCAATAT | ALPKQY | GCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATAT | AYWYQQKPGQAPVLVIY | AAAGACAGT | KDS | GAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGT | ERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAATCAGCAGACAGCAGTGGTACTTGGGTG | QSADSSGTWV | TGTCAATCAGCAGACAGCAGTGGTACTTGGGTGTTC | 36.0 | CQSADSSGTWVF | 12.0 | 447.456 | null | 69.904 | 100S286M247S4N | null | 386S2N36M211S | 1.4819999999999999e-127 | null | 5.591e-16 | 100.0 | null | 100.0 | 101 | 386 | 1 | 286 | null | null | null | null | 387 | 422 | 3 | 38 | 101 | 175 | 176 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 392.0 | 421.0 | 362.0 | 391.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'A', '28 ': 'L', '29 ': 'P', '36 ': 'K', '37 ': 'Q', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'Y', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'K', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'E', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'S', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'T', '87 ': 'V', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'V', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'S', '107 ': 'A', '108 ': 'D', '109 ': 'S', '113 ': 'S', '114 ': 'G', '115 ': 'T', '116 ': 'W', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCAGCTCTGGAGCC-1_contig_2 | ATCACATAACAACCACATTCCTCCTCTAAAGAAGCCCCTGGGAGCACAGCTCATCACCATGGACTGGACCTGGAGGTTCCTCTTTGTGGTGGCAGCAGCTACAGGTGTCCAGTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGATCCTTGATGCCTATTGTAGTAGTACCAGCTGCTATGCACGAAACTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-69*01 | IGHD2-2*01 | IGHJ3*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGATCCTTGATGCCTATTGTAGTAGTACCAGCTGCTATGCACGAAACTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGANNNNNNNNNNNTATTGTAGTAGTACCAGCTGCTATGCNNNNNNCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARSLMPIVVVPAAMHETFDIWGQGTMVTVSS | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARXXXXIVVVPAAMXXXFDIWGQGTMVTVSS | 1 | 294 | 306.0 | 331.0 | 338 | 382 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGA | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGA | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCAR | TATTGTAGTAGTACCAGCTGCTATGC | IVVVPAAM | TATTGTAGTAGTACCAGCTGCTATGC | IVVVPAAM | CTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | FDIWGQGTMVTVSS | CTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | FDIWGQGTMVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGSSVKVSCKAS | GGAGGCACCTTCAGCAGCTATGCT | GGTFSSYA | ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGG | ISWVRQAPGQGLEWMGG | ATCATCCCTATCTTTGGTACAGCA | IIPIFGTA | AACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | NYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGAGATCCTTGATGCCTATTGTAGTAGTACCAGCTGCTATGCACGAAACTTTTGATATC | ARSLMPIVVVPAAMHETFDI | TGTGCGAGATCCTTGATGCCTATTGTAGTAGTACCAGCTGCTATGCACGAAACTTTTGATATCTGG | 66.0 | CARSLMPIVVVPAAMHETFDIW | 22.0 | 459.921 | 50.677 | 87.208 | 115S294M159S2N | 420S4N26M122S1N | 452S5N45M71S | 2.352e-131 | 1.413e-10 | 3.0940000000000002e-21 | 100.0 | 100.0 | 100.0 | 116 | 409 | 1 | 294 | 421.0 | 446.0 | 5.0 | 30.0 | 453 | 497 | 6 | 50 | 116 | 190 | 191 | 214 | 215 | 265 | 266 | 289 | 290 | 403 | 464.0 | 496.0 | 404.0 | 463.0 | TCCTTGATGCC | 11 | ACGAAA | 6.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'S', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'I', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'G'}, 'cdrh2': {'56 ': 'I', '57 ': 'I', '58 ': 'P', '59 ': 'I', '62 ': 'F', '63 ': 'G', '64 ': 'T', '65 ': 'A'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'A', '81 ': 'D', '82 ': 'E', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'S', '108 ': 'L', '109 ': 'M', '110 ': 'P', '111 ': 'I', '111A': 'V', '111B': 'V', '111C': 'V', '112D': 'P', '112C': 'A', '112B': 'A', '112A': 'M', '112 ': 'H', '113 ': 'E', '114 ': 'T', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCAGCTCTGGAGCC-1_contig_1 | AGAGCTCTGGAGAAGAGCTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-20*01 | null | IGKJ4*01 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSLTFGGGTKVEIK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSLTFGGGTKVEIK | 1 | 286 | null | null | 287 | 322 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSS | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSS | null | null | null | null | TCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | TCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPGTLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCAGCTAC | QSVSSSY | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAGCAGTATGGTAGCTCACTCACT | QQYGSSLT | TGTCAGCAGTATGGTAGCTCACTCACTTTC | 30.0 | CQQYGSSLTF | 10.0 | 447.456 | null | 69.904 | 104S286M172S4N | null | 390S2N36M136S | 1.315e-127 | null | 4.953e-16 | 100.0 | null | 100.0 | 105 | 390 | 1 | 286 | null | null | null | null | 391 | 426 | 3 | 38 | 105 | 182 | 183 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 396.0 | 425.0 | 372.0 | 395.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'G', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'G', '114 ': 'S', '115 ': 'S', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCCAGAGATACACA-1_contig_2 | AGCTCTGAGAGAGGAGCCTTAGCCCTGGATTCCAAGGCCTATCCACTTGGTGATCAGCACTGAGCACCGAGGATTCACCATGGAACTGGGGCTCCGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATCTTGTAGTGGTGGTAGCTGCTACCCATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-21*01 | IGHD2-15*01 | IGHJ6*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATCTTGTAGTGGTGGTAGCTGCTACCCATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGANNTTGTAGTGGTGGTAGCTGCTACNNATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDLVVVVAATHYYYYYGMDVWGQGTTVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARXXVVVVAATXYYYYYGMDVWGQGTTVTVSS | 1 | 296 | 299.0 | 320.0 | 323 | 384 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | TTGTAGTGGTGGTAGCTGCTAC | VVVVAAT | TTGTAGTGGTGGTAGCTGCTAC | VVVVAAT | ATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | ATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACCTTCAGTAGCTATAGC | GFTFSSYS | ATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCC | MNWVRQAPGKGLEWVSS | ATTAGTAGTAGTAGTAGTTACATA | ISSSSSYI | TACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGATCTTGTAGTGGTGGTAGCTGCTACCCATTACTACTACTACTACGGTATGGACGTC | ARDLVVVVAATHYYYYYGMDV | TGTGCGAGAGATCTTGTAGTGGTGGTAGCTGCTACCCATTACTACTACTACTACGGTATGGACGTCTGG | 69.0 | CARDLVVVVAATHYYYYYGMDVW | 23.0 | 463.037 | 42.986 | 119.894 | 136S296M160S | 434S6N22M136S3N | 458S62M72S | 2.817e-132 | 3.046e-08 | 4.671e-31 | 100.0 | 100.0 | 100.0 | 137 | 432 | 1 | 296 | 435.0 | 456.0 | 7.0 | 28.0 | 459 | 520 | 1 | 62 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 488.0 | 520.0 | 425.0 | 487.0 | TC | 2 | CC | 2.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'S'}, 'fwh2': {'39 ': 'M', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'S', '59 ': 'S', '62 ': 'S', '63 ': 'S', '64 ': 'Y', '65 ': 'I'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'L', '109 ': 'V', '110 ': 'V', '111 ': 'V', '111A': 'V', '111B': 'A', '111C': 'A', '111D': 'T', '112D': 'H', '112C': 'Y', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCCAGAGATACACA-1_contig_1 | AGAGCTCTGGGGAGGAACTGCTCAGTTAGGACCCAGACGGAACCATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACTGGAGAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCTCACCTTCGGCCAAGGGACACGACTGGAGATTAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-15*01 | null | IGKJ5*01 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCTCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCTCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPLTFGQGTRLEIK | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPLTFGQGTRLEIK | 1 | 286 | null | null | 287 | 322 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWP | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWP | null | null | null | null | TCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | TFGQGTRLEIK | TCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | TFGQGTRLEIK | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVMTQSPATLSVSPGERATLSCRAS | CAGAGTGTTAGCAGCAAC | QSVSSN | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | ACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGT | TRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYC | TTCGGCCAAGGGACACGACTGGAGATTAAA | FGQGTRLEIK | CAGCAGTATAATAACTGGCCTCTCACC | QQYNNWPLT | TGTCAGCAGTATAATAACTGGCCTCTCACCTTC | 33.0 | CQQYNNWPLTF | 11.0 | 447.456 | null | 69.904 | 104S286M172S1N | null | 390S2N36M136S | 1.315e-127 | null | 4.953e-16 | 100.0 | null | 100.0 | 105 | 390 | 1 | 286 | null | null | null | null | 391 | 426 | 3 | 38 | 105 | 182 | 183 | 200 | 201 | 251 | 252 | 260 | 261 | 368 | 396.0 | 425.0 | 369.0 | 395.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'N'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'N', '114 ': 'W', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'R', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCCAGAGATGCGAC-1_contig_2 | CGAGCCCAGCACTGGAAGTCGCCGGTGTTTCCATTCGGTGATCATCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGATGAGGCTGGGGGACAGCTATGGTTACGAGTGGGGCGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30-3*01 | IGHD5-18*01 | IGHJ4*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGATGAGGCTGGGGGACAGCTATGGTTACGAGTGGGGCGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGANNNNNNNNNNNNACAGCTATGGTTACNNNNNNNNNNNTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDEAGGQLWLRVGRYFDYWGQGTLVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXXXXXQLWLXXXXYFDYWGQGTLVTVSS | 1 | 296 | 309.0 | 322.0 | 334 | 379 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | ACAGCTATGGTTAC | QLWL | ACAGCTATGGTTAC | QLWL | TACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | TACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGCT | GFTFSSYA | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGCAATAAA | ISYDGSNK | TACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGATGAGGCTGGGGGACAGCTATGGTTACGAGTGGGGCGGTACTTTGACTAC | ARDEAGGQLWLRVGRYFDY | TGTGCGAGAGATGAGGCTGGGGGACAGCTATGGTTACGAGTGGGGCGGTACTTTGACTACTGG | 63.0 | CARDEAGGQLWLRVGRYFDYW | 21.0 | 463.037 | 27.605 | 89.131 | 124S296M154S | 432S6N14M128S | 457S2N46M71S | 2.727e-132 | 0.00126 | 8.247999999999999e-22 | 100.0 | 100.0 | 100.0 | 125 | 420 | 1 | 296 | 433.0 | 446.0 | 7.0 | 20.0 | 458 | 503 | 3 | 48 | 125 | 199 | 200 | 223 | 224 | 274 | 275 | 298 | 299 | 412 | 470.0 | 502.0 | 413.0 | 469.0 | TGAGGCTGGGGG | 12 | GAGTGGGGCGG | 11.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'E', '109 ': 'A', '110 ': 'G', '111 ': 'G', '111A': 'Q', '111B': 'L', '111C': 'W', '112C': 'L', '112B': 'R', '112A': 'V', '112 ': 'G', '113 ': 'R', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCCAGAGATGCGAC-1_contig_1 | CCTGGGTCAGAGCTCTGGAGAAGAGCTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-20*01 | null | IGKJ1*01 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPPWTFGQGTKVEIK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPPWTFGQGTKVEIK | 1 | 290 | null | null | 291 | 328 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPP | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPP | null | null | null | null | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPGTLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCAGCTAC | QSVSSSY | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAGTATGGTAGCTCACCTCCGTGGACG | QQYGSSPPWT | TGTCAGCAGTATGGTAGCTCACCTCCGTGGACGTTC | 36.0 | CQQYGSSPPWTF | 12.0 | 453.689 | null | 73.749 | 112S290M174S | null | 402S38M136S | 1.785e-129 | null | 3.533e-17 | 100.0 | null | 100.0 | 113 | 402 | 1 | 290 | null | null | null | null | 403 | 440 | 1 | 38 | 113 | 190 | 191 | 211 | 212 | 262 | 263 | 271 | 272 | 379 | 410.0 | 439.0 | 380.0 | 409.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'G', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'G', '109 ': 'S', '113 ': 'S', '114 ': 'P', '115 ': 'P', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCCAGAGATGTCGG-1_contig_2 | TTGGGACCCAAAAACCACACCCCTCCTTGGGAGAATCCCCTAGATCACAGCTCCTCACCATGGACTGGACCTGGAGCATCCTTTTCTTGGTGGCAGCAGCAACAGGTGCCCACTCCCAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGTTGAGGTACCAGCTGCTAAGTCGCTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-18*01 | IGHD2-2*01 | IGHJ5*02 | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGTTGAGGTACCAGCTGCTAAGTCGCTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGNNNNNGTACCAGCTGCTANNNNNNTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARVEVPAAKSLDPWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARXXVPAAXXXDPWGQGTLVTVSS | 1 | 295 | 301.0 | 313.0 | 320 | 361 | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAR | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAR | GTACCAGCTGCTA | VPAA | GTACCAGCTGCTA | VPAA | TCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DPWGQGTLVTVSS | TCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DPWGQGTLVTVSS | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGTTACACCTTTACCAGCTATGGT | GYTFTSYG | ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGG | ISWVRQAPGQGLEWMGW | ATCAGCGCTTACAATGGTAACACA | ISAYNGNT | AACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGTTGAGGTACCAGCTGCTAAGTCGCTCGACCCC | ARVEVPAAKSLDP | TGTGCGAGAGTTGAGGTACCAGCTGCTAAGTCGCTCGACCCCTGG | 45.0 | CARVEVPAAKSLDPW | 15.0 | 461.479 | 25.682 | 81.44 | 116S295M137S1N | 416S14N13M119S4N | 435S9N42M71S | 7.691e-132 | 0.004556 | 1.625e-19 | 100.0 | 100.0 | 100.0 | 117 | 411 | 1 | 295 | 417.0 | 429.0 | 15.0 | 27.0 | 436 | 477 | 10 | 51 | 117 | 191 | 192 | 215 | 216 | 266 | 267 | 290 | 291 | 404 | 444.0 | 476.0 | 405.0 | 443.0 | TTGAG | 5 | AGTCGC | 6.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'I', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'A', '59 ': 'Y', '62 ': 'N', '63 ': 'G', '64 ': 'N', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'L', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'T', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'R', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'V', '108 ': 'E', '109 ': 'V', '110 ': 'P', '111 ': 'A', '112 ': 'A', '113 ': 'K', '114 ': 'S', '115 ': 'L', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCCAGAGATGTCGG-1_contig_1 | GGCTGGGGTCTCAGGAGGCAGCACTCTCGGGACGTCTCCACCATGGCCTGGGCTCTGCTCCTCCTCAGCCTCCTCACTCAGGGCACAGGATCCTGGGCTCAGTCTGCCCTGACTCAGCCTCGCTCAGTGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGATGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGATGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCTGCTCATATGCAGGCAGCTACACTTTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV2-11*01 | null | IGLJ2*01 | CAGTCTGCCCTGACTCAGCCTCGCTCAGTGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGATGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGATGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCTGCTCATATGCAGGCAGCTACACTTTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGCCCTGACTCAGCCTCGCTCAGTGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGATGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGATGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCTGCTCATATGCAGGCAGCTACACTTTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSALTQPRSVSGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSYTLVFGGGTKLTVL | QSALTQPRSVSGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSYTLVFGGGTKLTVL | 1 | 296 | null | null | 297 | 331 | CAGTCTGCCCTGACTCAGCCTCGCTCAGTGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGATGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGATGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCTGCTCATATGCAGGCAGCTACACTTT | QSALTQPRSVSGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSYT | CAGTCTGCCCTGACTCAGCCTCGCTCAGTGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGATGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGATGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCTGCTCATATGCAGGCAGCTACACTTT | QSALTQPRSVSGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSYT | null | null | null | null | GGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | CAGTCTGCCCTGACTCAGCCTCGCTCAGTGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACC | QSALTQPRSVSGSPGQSVTISCTGT | AGCAGTGATGTTGGTGGTTATAACTAT | SSDVGGYNY | GTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTAT | VSWYQQHPGKAPKLMIY | GATGTCAGT | DVS | AAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGC | KRPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | TGCTCATATGCAGGCAGCTACACTTTGGTA | CSYAGSYTLV | TGCTGCTCATATGCAGGCAGCTACACTTTGGTATTC | 36.0 | CCSYAGSYTLVF | 12.0 | 463.037 | null | 67.981 | 99S296M246S1N | null | 395S3N35M211S | 3.062e-132 | null | 2.147e-15 | 100.0 | null | 100.0 | 100 | 395 | 1 | 296 | null | null | null | null | 396 | 430 | 4 | 38 | 100 | 174 | 175 | 201 | 202 | 252 | 253 | 261 | 262 | 369 | 400.0 | 429.0 | 370.0 | 399.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'A', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'R', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'G', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'S', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'T'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'D', '30 ': 'V', '31 ': 'G', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'M', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'D', '57 ': 'V', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'C', '106 ': 'S', '107 ': 'Y', '108 ': 'A', '109 ': 'G', '113 ': 'S', '114 ': 'Y', '115 ': 'T', '116 ': 'L', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCCAGAGCCCTAAT-1_contig_1 | CTTATATGGGGAGCTCTGGGAGAGGAGCCCCAGCCCTGAGATTCCCAGGTGTTTCCATTCAGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTGGGACTGAGCTGGATTTTCCTTTTGGCTATTTTAAAAGGTGTCCAGTGTGAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGACCTACGAGGTTGGCGTTGGGAGTGGTTAACAGACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGCACCCACCAAGGCTCCGGATGTGTTCCCCATCATATCAGGGTGCAGACACCCAAAGGATAACAGCCCTGTGGTCCTGGCATGCTTGATAACTGGGTACCACC | H | F | T | F | T | F | T | IGHV3-9*01 | IGHD3-3*01 | IGHJ6*02 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGACCTACGAGGTTGGCGTTGGGAGTGGTTAACAGACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGANNNNNNNNNNNNNNNNNNGGAGTGGTTANNNNACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDLRGWRWEWLTDYYYGMDVWGQGTTVTVSS | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKXXXXXXXEWLXXYYYGMDVWGQGTTVTVSS | 1 | 296 | 315.0 | 324.0 | 329 | 384 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGA | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAK | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGA | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAK | GGAGTGGTTA | EWL | GGAGTGGTTA | EWL | ACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | ACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGRSLRLSCAAS | GGATTCACCTTTGATGATTATGCC | GFTFDDYA | ATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGT | MHWVRQAPGKGLEWVSG | ATTAGTTGGAATAGTGGTAGCATA | ISWNSGSI | GGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGT | GYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCAAAAGACCTACGAGGTTGGCGTTGGGAGTGGTTAACAGACTACTACTACGGTATGGACGTC | AKDLRGWRWEWLTDYYYGMDV | TGTGCAAAAGACCTACGAGGTTGGCGTTGGGAGTGGTTAACAGACTACTACTACGGTATGGACGTCTGG | 69.0 | CAKDLRGWRWEWLTDYYYGMDVW | 23.0 | 463.037 | 19.914 | 108.358 | 148S296M191S2N | 462S14N10M163S7N | 476S6N56M103S | 3.032e-132 | 0.2884 | 1.4900000000000002e-27 | 100.0 | 100.0 | 100.0 | 149 | 444 | 1 | 296 | 463.0 | 472.0 | 15.0 | 24.0 | 477 | 532 | 7 | 62 | 149 | 223 | 224 | 247 | 248 | 298 | 299 | 322 | 323 | 436 | 500.0 | 532.0 | 437.0 | 499.0 | CCTACGAGGTTGGCGTTG | 18 | ACAG | 4.0 | GCACCCACCAAGGCTCCGGATGTGTTCCCCATCATATCAGGGTGCAGACACCCAAAGGATAACAGCCCTGTGGTCCTGGCATGCTTGATAACTGGGTACCACC | IGHD | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'D', '36 ': 'D', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'G'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'W', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'I'}, 'fwh3': {'66 ': 'G', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'L', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'D', '108 ': 'L', '109 ': 'R', '110 ': 'G', '111 ': 'W', '111A': 'R', '111B': 'W', '111C': 'E', '111D': 'W', '112D': 'L', '112C': 'T', '112B': 'D', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCCAGAGCCCTAAT-1_contig_2 | GGGGTCACAAGAGGCAGCGCTCTCGGGACGTCTCCACCATGGCCTGGGCTCTGCTGCTCCTCACCCTCCTCACTCAGGACACAGGGTCCTGGGCCCAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGATGTTGGGAGTTATAACCTTGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACAATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCTGCTCATATGCAGGTAGTAGCACTTTGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV2-23*02 | null | IGLJ3*02 | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGATGTTGGGAGTTATAACCTTGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACAATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCTGCTCATATGCAGGTAGTAGCACTTTGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGATGTTGGGAGTTATAACCTTGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACAATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCTGCTCATATGCAGGTAGTAGCACTTTGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTLVFGGGTKLTVL | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTLVFGGGTKLTVL | 1 | 296 | null | null | 297 | 331 | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGATGTTGGGAGTTATAACCTTGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACAATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCTGCTCATATGCAGGTAGTAGCACTTT | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSST | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGATGTTGGGAGTTATAACCTTGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACAATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCTGCTCATATGCAGGTAGTAGCACTTT | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSST | null | null | null | null | GGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACC | QSALTQPASVSGSPGQSITISCTGT | AGCAGTGATGTTGGGAGTTATAACCTT | SSDVGSYNL | GTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTAT | VSWYQQHPGKAPKLMIY | GAGGTCAGT | EVS | AAGCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACAATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGC | KRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | TGCTCATATGCAGGTAGTAGCACTTTGGTG | CSYAGSSTLV | TGCTGCTCATATGCAGGTAGTAGCACTTTGGTGTTC | 36.0 | CCSYAGSSTLVF | 12.0 | 463.037 | null | 67.981 | 95S296M246S1N | null | 391S3N35M211S | 3.042e-132 | null | 2.133e-15 | 100.0 | null | 100.0 | 96 | 391 | 1 | 296 | null | null | null | null | 392 | 426 | 4 | 38 | 96 | 170 | 171 | 197 | 198 | 248 | 249 | 257 | 258 | 365 | 396.0 | 425.0 | 366.0 | 395.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'A', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'A', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'G', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'S', '19 ': 'I', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'T'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'D', '30 ': 'V', '31 ': 'G', '35 ': 'S', '36 ': 'Y', '37 ': 'N', '38 ': 'L'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'M', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'V', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'S', '74 ': 'N', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'C', '106 ': 'S', '107 ': 'Y', '108 ': 'A', '109 ': 'G', '113 ': 'S', '114 ': 'S', '115 ': 'T', '116 ': 'L', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCCAGAGTACGCCC-1_contig_2 | ACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACATCTGTGGTTCTTCCTTCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGTAGTGGCTACGGCACAGTGGGCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-59*08 | IGHD5-12*01 | IGHJ4*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGTAGTGGCTACGGCACAGTGGGCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGTAGTGGCTACGNNNNNNNNNNCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCASSGYGTVGYFDYWGQGTLVTVSS | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCASSGYXXXXYFDYWGQGTLVTVSS | 1 | 290 | 291.0 | 301.0 | 312 | 358 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | TAGTGGCTACG | SGY | TAGTGGCTACG | SGY | CTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | CTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGTAGTTACTAC | GGSISSYY | TGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTAT | WSWIRQPPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGTAGTGGCTACGGCACAGTGGGCTACTTTGACTAC | ASSGYGTVGYFDY | TGTGCGAGTAGTGGCTACGGCACAGTGGGCTACTTTGACTACTGG | 45.0 | CASSGYGTVGYFDYW | 15.0 | 453.689 | 21.837 | 91.054 | 92S290M139S3N | 382S7N11M128S5N | 403S1N47M71S | 1.615e-129 | 0.0622 | 1.971e-22 | 100.0 | 100.0 | 100.0 | 93 | 382 | 1 | 290 | 383.0 | 393.0 | 8.0 | 18.0 | 404 | 450 | 2 | 48 | 93 | 167 | 168 | 191 | 192 | 242 | 243 | 263 | 264 | 377 | 417.0 | 449.0 | 378.0 | 416.0 | null | 0 | GCACAGTGGG | 10.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'S', '107 ': 'S', '108 ': 'G', '109 ': 'Y', '110 ': 'G', '111 ': 'T', '112 ': 'V', '113 ': 'G', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCCAGAGTACGCCC-1_contig_1 | AGAGCTCTGGAGAAGAGCTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTGGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-20*01 | null | IGKJ1*01 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTGGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTNGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPGTFGQGTKVEIK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPXTFGQGTKVEIK | 1 | 288 | null | null | 290 | 325 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCT | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCT | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | null | null | null | null | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPGTLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCAGCTAC | QSVSSSY | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAGTATGGTAGCTCACCTGGGACG | QQYGSSPGT | TGTCAGCAGTATGGTAGCTCACCTGGGACGTTC | 33.0 | CQQYGSSPGTF | 11.0 | 450.572 | null | 69.904 | 104S288M173S2N | null | 393S2N36M136S | 1.5250000000000002e-128 | null | 4.98e-16 | 100.0 | null | 100.0 | 105 | 392 | 1 | 288 | null | null | null | null | 394 | 429 | 3 | 38 | 105 | 182 | 183 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 399.0 | 428.0 | 372.0 | 398.0 | G | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'G', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'G', '109 ': 'S', '114 ': 'S', '115 ': 'P', '116 ': 'G', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCCAGAGTAGTGCG-1_contig_2 | GAGCTCTGGGAGAGGAGCCCAGCACTAGAAGTCGGCGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGGAGGCTTCTATTGTAGTAGTACCAGCTGCTATGCAAAATGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30*18 | IGHD2-2*01 | IGHJ5*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGGAGGCTTCTATTGTAGTAGTACCAGCTGCTATGCAAAATGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGNNNNNNNNTATTGTAGTAGTACCAGCTGCTATGCNNNNTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKGGFYCSSTSCYAKWFDPWGQGTLVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXXYCSSTSCYAXWFDPWGQGTLVTVSS | 1 | 295 | 304.0 | 329.0 | 334 | 379 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | TATTGTAGTAGTACCAGCTGCTATGC | YCSSTSCYA | TATTGTAGTAGTACCAGCTGCTATGC | YCSSTSCYA | TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGGC | GFTFSSYG | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGTAATAAA | ISYDGSNK | TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAAAGGAGGCTTCTATTGTAGTAGTACCAGCTGCTATGCAAAATGGTTCGACCCC | AKGGFYCSSTSCYAKWFDP | TGTGCGAAAGGAGGCTTCTATTGTAGTAGTACCAGCTGCTATGCAAAATGGTTCGACCCCTGG | 63.0 | CAKGGFYCSSTSCYAKWFDPW | 21.0 | 461.479 | 50.677 | 89.131 | 137S295M155S1N | 440S4N26M121S1N | 470S5N46M71S | 8.222e-132 | 1.461e-10 | 8.438999999999999e-22 | 100.0 | 100.0 | 100.0 | 138 | 432 | 1 | 295 | 441.0 | 466.0 | 5.0 | 30.0 | 471 | 516 | 6 | 51 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 483.0 | 515.0 | 426.0 | 482.0 | GAGGCTTC | 8 | AAAA | 4.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'G', '108 ': 'G', '109 ': 'F', '110 ': 'Y', '111 ': 'C', '111A': 'S', '111B': 'S', '111C': 'T', '112C': 'S', '112B': 'C', '112A': 'Y', '112 ': 'A', '113 ': 'K', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCCAGAGTAGTGCG-1_contig_1 | GGGGTCACAAGAGGCAGCGCTCTCGGGACGTCTCCACCATGGCCTGGGCTCTGCTGCTCCTCACCCTCCTCACTCAGGACACAGGGTCCTGGGCCCAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGATGTTGGGAGTTATAACCTTGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACAATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCTGCTCATATGCAGGTAGTAGCACTTTCGATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV2-23*02 | null | IGLJ2*01 | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGATGTTGGGAGTTATAACCTTGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACAATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCTGCTCATATGCAGGTAGTAGCACTTTCGATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGATGTTGGGAGTTATAACCTTGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACAATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCTGCTCATATGCAGGTAGTAGCACTTTCNNTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTFDVVFGGGTKLTVL | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTFXVVFGGGTKLTVL | 1 | 297 | null | null | 300 | 337 | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGATGTTGGGAGTTATAACCTTGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACAATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCTGCTCATATGCAGGTAGTAGCACTTTC | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTF | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGATGTTGGGAGTTATAACCTTGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACAATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCTGCTCATATGCAGGTAGTAGCACTTTC | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTF | null | null | null | null | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACC | QSALTQPASVSGSPGQSITISCTGT | AGCAGTGATGTTGGGAGTTATAACCTT | SSDVGSYNL | GTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTAT | VSWYQQHPGKAPKLMIY | GAGGTCAGT | EVS | AAGCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACAATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGC | KRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | TGCTCATATGCAGGTAGTAGCACTTTCGATGTGGTA | CSYAGSSTFDVV | TGCTGCTCATATGCAGGTAGTAGCACTTTCGATGTGGTATTC | 42.0 | CCSYAGSSTFDVVF | 14.0 | 464.595 | null | 73.749 | 95S297M251S | null | 394S38M211S | 1.043e-132 | null | 3.952e-17 | 100.0 | null | 100.0 | 96 | 392 | 1 | 297 | null | null | null | null | 395 | 432 | 1 | 38 | 96 | 170 | 171 | 197 | 198 | 248 | 249 | 257 | 258 | 365 | 402.0 | 431.0 | 366.0 | 401.0 | GA | 2 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'A', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'A', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'G', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'S', '19 ': 'I', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'T'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'D', '30 ': 'V', '31 ': 'G', '35 ': 'S', '36 ': 'Y', '37 ': 'N', '38 ': 'L'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'M', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'V', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'S', '74 ': 'N', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'C', '106 ': 'S', '107 ': 'Y', '108 ': 'A', '109 ': 'G', '110 ': 'S', '112 ': 'S', '113 ': 'T', '114 ': 'F', '115 ': 'D', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCCAGAGTGGAGAA-1_contig_2 | AGCTCTGGGAGAGGAGCCCCAGCCTTGGGATTCCCAAGTGTTTTCATTCAGTGATCAGGACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGATTTTCCTTGCTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGTATCTTCTCGAGGTCCGCCGGGGGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-15*01 | IGHD3-10*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGTATCTTCTCGAGGTCCGCCGGGGGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGNNNNNNNNNNNNNNNNNNCGGGGNACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTVSSRGPPGDWGQGTLVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTXXXXXXXGXWGQGTLVTVSS | 1 | 301 | 320.0 | 324.0 | 326 | 361 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | CGGGG | G | CGGGG | G | ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WGQGTLVTVSS | ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACTTTCAGTAACGCCTGG | GFTFSNAW | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGT | MSWVRQAPGKGLEWVGR | ATTAAAAGCAAAACTGATGGTGGGACAACA | IKSKTDGGTT | GACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGT | DYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | ACCACAGTATCTTCTCGAGGTCCGCCGGGGGAC | TTVSSRGPPGD | TGTACCACAGTATCTTCTCGAGGTCCGCCGGGGGACTGG | 39.0 | CTTVSSRGPPGDW | 13.0 | 470.828 | 10.301 | 69.904 | 137S301M131S1N | 456S14N5M108S12N | 462S12N36M71S | 1.2269999999999999e-134 | 202.1 | 5.016e-16 | 100.0 | 100.0 | 100.0 | 138 | 438 | 1 | 301 | 457.0 | 461.0 | 15.0 | 19.0 | 463 | 498 | 13 | 48 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 317 | 318 | 431 | 465.0 | 497.0 | 432.0 | 464.0 | TATCTTCTCGAGGTCCGC | 18 | G | 1.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'N', '37 ': 'A', '38 ': 'W'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'K', '58 ': 'S', '59 ': 'K', '60 ': 'T', '61 ': 'D', '62 ': 'G', '63 ': 'G', '64 ': 'T', '65 ': 'T'}, 'fwh3': {'66 ': 'D', '67 ': 'Y', '68 ': 'A', '69 ': 'A', '70 ': 'P', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'D', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'T', '106 ': 'T', '107 ': 'V', '108 ': 'S', '109 ': 'S', '110 ': 'R', '113 ': 'G', '114 ': 'P', '115 ': 'P', '116 ': 'G', '117 ': 'D'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCCAGAGTGGAGAA-1_contig_1 | AGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAAATGTGACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-5*03 | null | IGKJ1*01 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSWTFGQGTKVEIK | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSWTFGQGTKVEIK | 1 | 285 | null | null | 286 | 322 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCT | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYS | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCT | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYS | null | null | null | null | TGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | TGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQMTQSPSTLSASVGDRVTITCRAS | CAGAGTATTAGTAGCTGG | QSISSW | TTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | AAGGCGTCT | KAS | AGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGC | SLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAACAGTATAATAGTTATTCTTGGACG | QQYNSYSWT | TGCCAACAGTATAATAGTTATTCTTGGACGTTC | 33.0 | CQQYNSYSWTF | 11.0 | 445.898 | null | 71.827 | 93S285M173S2N | null | 378S1N37M136S | 3.792e-127 | null | 1.28e-16 | 100.0 | null | 100.0 | 94 | 378 | 1 | 285 | null | null | null | null | 379 | 415 | 2 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 385.0 | 414.0 | 358.0 | 384.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'W'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'K', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'D', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'S', '114 ': 'Y', '115 ': 'S', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCCAGCACTCTGTC-1_contig_2 | TGGGGACCCAAAAACCACACCCCTCCTTGGGAGAATCCCCTAGATCACAGCTCCTCACCATGGACTGGACCTGGAGCATCCTTTTCTTGGTGGCAGCAGCAACAGGTGCCCACTCCCAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGTGGCTACCTCAGGGAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-18*01 | IGHD5-12*01 | IGHJ5*02 | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGTGGCTACCTCAGGGAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGTGGCTACNNNNNNNAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARVATSGNWFDPWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARVATXXNWFDPWGQGTLVTVSS | 1 | 295 | 296.0 | 302.0 | 310 | 358 | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAR | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAR | TGGCTAC | AT | TGGCTAC | AT | AACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | AACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGTTACACCTTTACCAGCTATGGT | GYTFTSYG | ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGG | ISWVRQAPGQGLEWMGW | ATCAGCGCTTACAATGGTAACACA | ISAYNGNT | AACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGTGGCTACCTCAGGGAACTGGTTCGACCCC | ARVATSGNWFDP | TGTGCGAGAGTGGCTACCTCAGGGAACTGGTTCGACCCCTGG | 42.0 | CARVATSGNWFDPW | 14.0 | 461.479 | 14.146 | 94.899 | 116S295M134S1N | 411S10N7M127S6N | 425S2N49M71S | 7.647e-132 | 13.46 | 1.436e-23 | 100.0 | 100.0 | 100.0 | 117 | 411 | 1 | 295 | 412.0 | 418.0 | 11.0 | 17.0 | 426 | 474 | 3 | 51 | 117 | 191 | 192 | 215 | 216 | 266 | 267 | 290 | 291 | 404 | 441.0 | 473.0 | 405.0 | 440.0 | null | 0 | CTCAGGG | 7.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'I', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'A', '59 ': 'Y', '62 ': 'N', '63 ': 'G', '64 ': 'N', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'L', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'T', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'R', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'V', '108 ': 'A', '109 ': 'T', '110 ': 'S', '112 ': 'G', '113 ': 'N', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCCAGCACTCTGTC-1_contig_1 | GCTGGGGTCTCAGGAGGCAGCGCTCTCAGGACGTCACCACCATGGCCTGGGCTCTGCTCCTCCTCAGCCTCCTCACTCAGGGCACAGGGTCCTGGGCCCAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACAATTTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV2-8*01 | null | IGLJ2*01 | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACAATTTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACAATTTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSNNLVFGGGTKLTVL | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSNNLVFGGGTKLTVL | 1 | 296 | null | null | 297 | 331 | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACAATTT | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSNN | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACAATTT | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSNN | null | null | null | null | GGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACC | QSALTQPPSASGSPGQSVTISCTGT | AGCAGTGACGTTGGTGGTTATAACTAT | SSDVGGYNY | GTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTAT | VSWYQQHPGKAPKLMIY | GAGGTCAGT | EVS | AAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGC | KRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | AGCTCATATGCAGGCAGCAACAATTTGGTA | SSYAGSNNLV | TGCAGCTCATATGCAGGCAGCAACAATTTGGTATTC | 36.0 | CSSYAGSNNLVF | 12.0 | 463.037 | null | 67.981 | 98S296M246S1N | null | 394S3N35M211S | 3.057e-132 | null | 2.144e-15 | 100.0 | null | 100.0 | 99 | 394 | 1 | 296 | null | null | null | null | 395 | 429 | 4 | 38 | 99 | 173 | 174 | 200 | 201 | 251 | 252 | 260 | 261 | 368 | 399.0 | 428.0 | 369.0 | 398.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'A', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'A', '12 ': 'S', '13 ': 'G', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'S', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'T'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'D', '30 ': 'V', '31 ': 'G', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'M', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'V', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'V', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'S', '106 ': 'S', '107 ': 'Y', '108 ': 'A', '109 ': 'G', '113 ': 'S', '114 ': 'N', '115 ': 'N', '116 ': 'L', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCCAGCAGATGAGC-1_contig_2 | ACCCAAAAACCACACCCCTCCTTGGGAGAATCCCCTAGATCACAGCTCCTCACCATGGACTGGACCTGGAGCATCCTTTTCTTGGTGGCAGCAGCAACAGGTGCCCACTCCCAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGAGACCACTCCCCGGGGGAATATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-18*01 | IGHD3-16*01 | IGHJ4*02 | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGAGACCACTCCCCGGGGGAATATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGANNNNNNNNNNNGGGGGANNNTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARETTPRGNIDYWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARXXXXXGXXDYWGQGTLVTVSS | 1 | 296 | 308.0 | 313.0 | 317 | 358 | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAR | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAR | GGGGGA | G | GGGGGA | G | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGTTACACCTTTACCAGCTATGGT | GYTFTSYG | ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGG | ISWVRQAPGQGLEWMGW | ATCAGCGCTTACAATGGTAACACA | ISAYNGNT | AACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGAGACCACTCCCCGGGGGAATATTGACTAC | ARETTPRGNIDY | TGTGCGAGAGAGACCACTCCCCGGGGGAATATTGACTACTGG | 42.0 | CARETTPRGNIDYW | 14.0 | 463.037 | 12.223 | 81.44 | 111S296M133S | 418S17N6M116S14N | 427S6N42M71S | 2.572e-132 | 50.54 | 1.601e-19 | 100.0 | 100.0 | 100.0 | 112 | 407 | 1 | 296 | 419.0 | 424.0 | 18.0 | 23.0 | 428 | 469 | 7 | 48 | 112 | 186 | 187 | 210 | 211 | 261 | 262 | 285 | 286 | 399 | 436.0 | 468.0 | 400.0 | 435.0 | GACCACTCCCC | 11 | ATA | 3.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'I', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'A', '59 ': 'Y', '62 ': 'N', '63 ': 'G', '64 ': 'N', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'L', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'T', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'R', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'E', '108 ': 'T', '109 ': 'T', '110 ': 'P', '112 ': 'R', '113 ': 'G', '114 ': 'N', '115 ': 'I', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCCAGCAGATGAGC-1_contig_1 | TGGGGATAAGAGAGGCCTGGGGAGCCCAGCTGTGCTGTGGGCTCAGGAGGCAGAGCTCTGGGAATCTCACCATGGCCTGGACCCCTCTCCTGCTCCCCCTCCTCACTTTCTGCACAGTCTCTGAGGCCTCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATCCTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-10*01 | null | IGLJ3*02 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATCCTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATCNTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPPSVSVSPGQTARITCSGDALPKKYAYWYQQKSGQAPVLVIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCYSTDSSGNPWVFGGGTKLTVL | SYELTQPPSVSVSPGQTARITCSGDALPKKYAYWYQQKSGQAPVLVIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCYSTDSSGNXWVFGGGTKLTVL | 1 | 286 | null | null | 288 | 325 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATC | SYELTQPPSVSVSPGQTARITCSGDALPKKYAYWYQQKSGQAPVLVIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCYSTDSSGN | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATC | SYELTQPPSVSVSPGQTARITCSGDALPKKYAYWYQQKSGQAPVLVIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCYSTDSSGN | null | null | null | null | TTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | TTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTARITCSGD | GCATTGCCAAAAAAATAT | ALPKKY | GCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTAT | AYWYQQKSGQAPVLVIY | GAGGACAGC | EDS | AAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGT | KRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | TACTCAACAGACAGCAGTGGTAATCCTTGGGTG | YSTDSSGNPWV | TGTTACTCAACAGACAGCAGTGGTAATCCTTGGGTGTTC | 39.0 | CYSTDSSGNPWVF | 13.0 | 447.456 | null | 73.749 | 128S286M250S4N | null | 415S38M211S | 1.5579999999999999e-127 | null | 4.084e-17 | 100.0 | null | 100.0 | 129 | 414 | 1 | 286 | null | null | null | null | 416 | 453 | 1 | 38 | 129 | 203 | 204 | 221 | 222 | 272 | 273 | 281 | 282 | 389 | 423.0 | 452.0 | 390.0 | 422.0 | C | 1 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'A', '28 ': 'L', '29 ': 'P', '36 ': 'K', '37 ': 'K', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'Y', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'S', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'S', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'M', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'A', '95 ': 'Q', '96 ': 'V', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Y', '106 ': 'S', '107 ': 'T', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'G', '114 ': 'N', '115 ': 'P', '116 ': 'W', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCCAGCAGCCAATT-1_contig_1 | ACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACATCTGTGGTTCTTCCTCCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGATGTACCAGCTGCTCCCCACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGCACCCACCAAGGCTCCGGATGTGTTCCCCATCATATCAGGGTGCAGACACCCAAAGGATAACAGCCCTGTGGTCCTGGCATGCTTGATAACTGGGTACCACC | H | F | T | F | T | F | T | IGHV4-61*02 | IGHD2-2*01 | IGHJ6*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGATGTACCAGCTGCTCCCCACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGANGTACCAGCTGCTNNNNACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARDVPAAPHYYYYGMDVWGQGTTVTVSS | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXVPAAXXYYYYGMDVWGQGTTVTVSS | 1 | 299 | 301.0 | 312.0 | 317 | 375 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | GTACCAGCTGCT | VPAA | GTACCAGCTGCT | VPAA | ACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | ACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSQTLSLTCTVS | GGTGGCTCCATCAGCAGTGGTAGTTACTAC | GGSISSGSYY | TGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGT | WSWIRQPAGKGLEWIGR | ATCTATACCAGTGGGAGCACC | IYTSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGATGTACCAGCTGCTCCCCACTACTACTACTACGGTATGGACGTC | ARDVPAAPHYYYYGMDV | TGTGCGAGAGATGTACCAGCTGCTCCCCACTACTACTACTACGGTATGGACGTCTGG | 57.0 | CARDVPAAPHYYYYGMDVW | 19.0 | 467.712 | 23.76 | 114.126 | 92S299M179S | 392S14N12M166S5N | 408S3N59M103S | 1.066e-133 | 0.01798 | 2.449e-29 | 100.0 | 100.0 | 100.0 | 93 | 391 | 1 | 299 | 393.0 | 404.0 | 15.0 | 26.0 | 409 | 467 | 4 | 62 | 93 | 167 | 168 | 197 | 198 | 248 | 249 | 269 | 270 | 383 | 435.0 | 467.0 | 384.0 | 434.0 | T | 1 | CCCC | 4.0 | GCACCCACCAAGGCTCCGGATGTGTTCCCCATCATATCAGGGTGCAGACACCCAAAGGATAACAGCCCTGTGGTCCTGGCATGCTTGATAACTGGGTACCACC | IGHD | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'G', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'A', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'T', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'V', '109 ': 'P', '110 ': 'A', '111 ': 'A', '111A': 'P', '111B': 'H', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCCAGCAGCCAATT-1_contig_2 | GGGAGGAGTCAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCCACGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ1*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCCACGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCNNNGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPTWTFGQGTKVEIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPXWTFGQGTKVEIK | 1 | 284 | null | null | 288 | 325 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | null | null | null | null | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAACAGAGTTACAGTACCCCCACGTGGACG | QQSYSTPTWT | TGTCAACAGAGTTACAGTACCCCCACGTGGACGTTC | 36.0 | CQQSYSTPTWTF | 12.0 | 444.34 | null | 73.749 | 96S284M177S3N | null | 383S38M136S | 1.129e-126 | null | 3.415e-17 | 100.0 | null | 100.0 | 97 | 380 | 1 | 284 | null | null | null | null | 384 | 421 | 1 | 38 | 97 | 174 | 175 | 192 | 193 | 243 | 244 | 252 | 253 | 360 | 391.0 | 420.0 | 361.0 | 390.0 | CAC | 3 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '113 ': 'T', '114 ': 'P', '115 ': 'T', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCCAGCAGCGTTCG-1_contig_2 | GGGGGCTTTCTGAGAGTCATGGATCTCATGTGCAAGAAAATGAAGCACCTGTGGTTCTTCCTCCTGCTGGTGGCGGCTCCCAGATGGGTCCTGTCCCAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAACCTTGATAGTAGTGGTTATTACCCCGAATACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-39*01 | IGHD3-22*01 | IGHJ1*01 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAACCTTGATAGTAGTGGTTATTACCCCGAATACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGANNNNTGATAGTAGTGGTTATTACNNNGAATACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCANLDSSGYYPEYFQHWGQGTLVTVSS | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAXXDSSGYYXEYFQHWGQGTLVTVSS | 1 | 295 | 300.0 | 318.0 | 322 | 370 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGA | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGA | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | TGATAGTAGTGGTTATTAC | DSSGYY | TGATAGTAGTGGTTATTAC | DSSGYY | GAATACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG | EYFQHWGQGTLVTVSS | GAATACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG | EYFQHWGQGTLVTVSS | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QLQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGCAGTAGTAGTTACTAC | GGSISSSSYY | TGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGT | WGWIRQPPGKGLEWIGS | ATCTATTATAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGCACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAACCTTGATAGTAGTGGTTATTACCCCGAATACTTCCAGCAC | ANLDSSGYYPEYFQH | TGTGCGAACCTTGATAGTAGTGGTTATTACCCCGAATACTTCCAGCACTGG | 51.0 | CANLDSSGYYPEYFQHW | 17.0 | 461.479 | 37.218 | 94.899 | 96S295M146S4N | 395S9N19M123S3N | 417S3N49M71S | 7.529e-132 | 1.503e-06 | 1.414e-23 | 100.0 | 100.0 | 100.0 | 97 | 391 | 1 | 295 | 396.0 | 414.0 | 10.0 | 28.0 | 418 | 466 | 4 | 52 | 97 | 171 | 172 | 201 | 202 | 252 | 253 | 273 | 274 | 387 | 433.0 | 465.0 | 388.0 | 432.0 | ACCT | 4 | CCC | 3.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'L', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'G', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'N', '107 ': 'L', '108 ': 'D', '109 ': 'S', '110 ': 'S', '111 ': 'G', '111A': 'Y', '112A': 'Y', '112 ': 'P', '113 ': 'E', '114 ': 'Y', '115 ': 'F', '116 ': 'Q', '117 ': 'H'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCCAGCAGCGTTCG-1_contig_1 | AGCTTCAGCTGTGGGTAGAGAAGACAGGACTCAGGACAATCTCCAGCATGGCCAGCTTCCCTCTCCTCCTCACCCTCCTCACTCACTGTGCAGGGTCCTGGGCCCAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGGAATTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-44*01 | null | IGLJ3*02 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGGAATTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGNNNTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGNWVFGGGTKLTVL | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGXWVFGGGTKLTVL | 1 | 293 | null | null | 297 | 334 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGG | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGG | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNG | null | null | null | null | TTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | TTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGC | QSVLTQPPSASGTPGQRVTISCSGS | AGCTCCAACATCGGAAGTAATACT | SSNIGSNT | GTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTAT | VNWYQQLPGTAPKLLIY | AGTAATAAT | SNN | CAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGT | QRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | GCAGCATGGGATGACAGCCTGAATGGGAATTGGGTG | AAWDDSLNGNWV | TGTGCAGCATGGGATGACAGCCTGAATGGGAATTGGGTGTTC | 42.0 | CAAWDDSLNGNWVF | 14.0 | 458.363 | null | 73.749 | 104S293M252S3N | null | 400S38M211S | 7.922000000000001e-131 | null | 3.99e-17 | 100.0 | null | 100.0 | 105 | 397 | 1 | 293 | null | null | null | null | 401 | 438 | 1 | 38 | 105 | 179 | 180 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 408.0 | 437.0 | 372.0 | 407.0 | GAA | 3 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'A', '12 ': 'S', '13 ': 'G', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'S', '37 ': 'N', '38 ': 'T'}, 'fwl2': {'39 ': 'V', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'S', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'Q', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'A', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'A', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'D', '110 ': 'S', '112 ': 'L', '113 ': 'N', '114 ': 'G', '115 ': 'N', '116 ': 'W', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCCAGGTAAGGGCT-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGAGTCGGATAGTAGTGGTTATTATTATGGGGGTGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD3-22*01 | IGHJ5*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGAGTCGGATAGTAGTGGTTATTATTATGGGGGTGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGANNNNGATAGTAGTGGTTATTANNNNNNNNNNNACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKESDSSGYYYGGDWFDPWGQGTLVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXDSSGYXXXXXWFDPWGQGTLVTVSS | 1 | 296 | 301.0 | 317.0 | 329 | 376 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GATAGTAGTGGTTATTA | DSSGY | GATAGTAGTGGTTATTA | DSSGY | ACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | ACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAAAGAGTCGGATAGTAGTGGTTATTATTATGGGGGTGACTGGTTCGACCCC | AKESDSSGYYYGGDWFDP | TGTGCGAAAGAGTCGGATAGTAGTGGTTATTATTATGGGGGTGACTGGTTCGACCCCTGG | 60.0 | CAKESDSSGYYYGGDWFDPW | 20.0 | 463.037 | 33.373 | 92.976 | 136S296M151S | 436S10N17M130S4N | 464S3N48M71S | 2.772e-132 | 2.349e-05 | 5.83e-23 | 100.0 | 100.0 | 100.0 | 137 | 432 | 1 | 296 | 437.0 | 453.0 | 11.0 | 27.0 | 465 | 512 | 4 | 51 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 479.0 | 511.0 | 425.0 | 478.0 | GTCG | 4 | TTATGGGGGTG | 11.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'E', '108 ': 'S', '109 ': 'D', '110 ': 'S', '111 ': 'S', '111A': 'G', '111B': 'Y', '112C': 'Y', '112B': 'Y', '112A': 'G', '112 ': 'G', '113 ': 'D', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCCAGGTAAGGGCT-1_contig_1 | TGGGGGAGTCAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCGAACTTTCGGCCCTGGGACCAAAGTGGATATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ3*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCGAACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCNNACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPRTFGPGTKVDIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPXTFGPGTKVDIK | 1 | 286 | null | null | 289 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | null | null | null | null | ACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | TFGPGTKVDIK | ACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | TFGPGTKVDIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCCCTGGGACCAAAGTGGATATCAAA | FGPGTKVDIK | CAACAGAGTTACAGTACCCCTCGAACT | QQSYSTPRT | TGTCAACAGAGTTACAGTACCCCTCGAACTTTC | 33.0 | CQQSYSTPRTF | 11.0 | 447.456 | null | 66.059 | 96S286M172S1N | null | 384S4N34M136S | 1.2949999999999999e-127 | null | 7.016e-15 | 100.0 | null | 100.0 | 97 | 382 | 1 | 286 | null | null | null | null | 385 | 418 | 5 | 38 | 97 | 174 | 175 | 192 | 193 | 243 | 244 | 252 | 253 | 360 | 388.0 | 417.0 | 361.0 | 387.0 | GA | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'P', '116 ': 'R', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'P', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'D', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCCAGGTAGCTGCC-1_contig_1 | ATCACATAACAACCACATTCCTCCTCTAAAGAAGCCCCTGGGAGCACAGCTCATCACCATGGACTGGACCTGGAGGTTCCTCTTTGTGGTGGCAGCAGCTACAGGTGTCCAGTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGAGTCTCCTAGGGGAGTGGGAACAAGTGGGGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-69*01 | IGHD1-26*01 | IGHJ3*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGAGTCTCCTAGGGGAGTGGGAACAAGTGGGGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGANNNNNNNNNNNNAGTGGGANNNNNNNNNGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARESPRGVGTSGDAFDIWGQGTMVTVSS | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARXXXXXVGXXXDAFDIWGQGTMVTVSS | 1 | 296 | 309.0 | 315.0 | 325 | 373 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCAR | AGTGGGA | VG | AGTGGGA | VG | GATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | GATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGSSVKVSCKAS | GGAGGCACCTTCAGCAGCTATGCT | GGTFSSYA | ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGG | ISWVRQAPGQGLEWMGG | ATCATCCCTATCTTTGGTACAGCA | IIPIFGTA | AACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | NYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGAGAGAGTCTCCTAGGGGAGTGGGAACAAGTGGGGATGCTTTTGATATC | ARESPRGVGTSGDAFDI | TGTGCGAGAGAGTCTCCTAGGGGAGTGGGAACAAGTGGGGATGCTTTTGATATCTGG | 57.0 | CARESPRGVGTSGDAFDIW | 19.0 | 463.037 | 14.146 | 94.899 | 115S296M148S | 423S5N7M129S8N | 439S1N49M71S | 2.6670000000000002e-132 | 13.81 | 1.4729999999999998e-23 | 100.0 | 100.0 | 100.0 | 116 | 411 | 1 | 296 | 424.0 | 430.0 | 6.0 | 12.0 | 440 | 488 | 2 | 50 | 116 | 190 | 191 | 214 | 215 | 265 | 266 | 289 | 290 | 403 | 455.0 | 487.0 | 404.0 | 454.0 | GTCTCCTAGGGG | 12 | ACAAGTGGG | 9.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'S', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'I', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'G'}, 'cdrh2': {'56 ': 'I', '57 ': 'I', '58 ': 'P', '59 ': 'I', '62 ': 'F', '63 ': 'G', '64 ': 'T', '65 ': 'A'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'A', '81 ': 'D', '82 ': 'E', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'E', '108 ': 'S', '109 ': 'P', '110 ': 'R', '111 ': 'G', '111A': 'V', '111B': 'G', '112B': 'T', '112A': 'S', '112 ': 'G', '113 ': 'D', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCCAGGTAGCTGCC-1_contig_2 | GCTGGGGTCTCAGGAGGCAGCGCTCTCAGGACGTCACCACCATGGCCTGGGCTCTGCTCCTCCTCACCCTCCTCACTCAGGGCACAGGGTCCTGGGCCCAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACAATTCCCCTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV2-8*01 | null | IGLJ2*01 | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACAATTCCCCTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACAATTNNNNTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSNNSPVVFGGGTKLTVL | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSNNXXVVFGGGTKLTVL | 1 | 295 | null | null | 300 | 337 | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACAATT | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSNN | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACAATT | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSNN | null | null | null | null | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACC | QSALTQPPSASGSPGQSVTISCTGT | AGCAGTGACGTTGGTGGTTATAACTAT | SSDVGGYNY | GTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTAT | VSWYQQHPGKAPKLMIY | GAGGTCAGT | EVS | AAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGC | KRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | AGCTCATATGCAGGCAGCAACAATTCCCCTGTGGTA | SSYAGSNNSPVV | TGCAGCTCATATGCAGGCAGCAACAATTCCCCTGTGGTATTC | 42.0 | CSSYAGSNNSPVVF | 14.0 | 461.479 | null | 73.749 | 98S295M253S2N | null | 397S38M211S | 9.092000000000001e-132 | null | 3.971e-17 | 100.0 | null | 100.0 | 99 | 393 | 1 | 295 | null | null | null | null | 398 | 435 | 1 | 38 | 99 | 173 | 174 | 200 | 201 | 251 | 252 | 260 | 261 | 368 | 405.0 | 434.0 | 369.0 | 404.0 | CCCC | 4 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'A', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'A', '12 ': 'S', '13 ': 'G', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'S', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'T'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'D', '30 ': 'V', '31 ': 'G', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'M', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'V', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'V', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'S', '106 ': 'S', '107 ': 'Y', '108 ': 'A', '109 ': 'G', '110 ': 'S', '112 ': 'N', '113 ': 'N', '114 ': 'S', '115 ': 'P', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCCAGGTGTGAATA-1_contig_2 | ACTCTGCTGAAGAAAACCAGCCCTGCAGCTCTGGGAGAGGAGCCCCAGCCCTGGGATTCCCAGCTGTTTCTGCTTGCTGATCAGGACTGCACACAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTTGTTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCCGGGGGAGGCTTAGTTCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGTGTGGGTCTCACGTATTAATAGTGATGGGAGTAGCACAAGCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACGCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGGAGAAGACGGGATTTACTATGATAGTAGTGGTTATTACGAGCCGGGGTTACCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-74*01 | IGHD3-22*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCCGGGGGAGGCTTAGTTCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGTGTGGGTCTCACGTATTAATAGTGATGGGAGTAGCACAAGCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACGCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGGAGAAGACGGGATTTACTATGATAGTAGTGGTTATTACGAGCCGGGGTTACCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCCGGGGGAGGCTTAGTTCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGTGTGGGTCTCACGTATTAATAGTGATGGGAGTAGCACAAGCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACGCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGNNNNNNNNNNNNNTTACTATGATAGTAGTGGTTATTACNNNNNNNNNNNNNNTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMHWVRQAPGKGLVWVSRINSDGSSTSYADSVKGRFTISRDNAKNTLYLQMNSLRAEDTAVYYCARGEDGIYYDSSGYYEPGLPDYWGQGTLVTVSS | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMHWVRQAPGKGLVWVSRINSDGSSTSYADSVKGRFTISRDNAKNTLYLQMNSLRAEDTAVYYCARXXXXXYYDSSGYYXXXXXDYWGQGTLVTVSS | 1 | 295 | 309.0 | 333.0 | 348 | 388 | GAGGTGCAGCTGGTGGAGTCCGGGGGAGGCTTAGTTCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGTGTGGGTCTCACGTATTAATAGTGATGGGAGTAGCACAAGCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACGCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAG | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMHWVRQAPGKGLVWVSRINSDGSSTSYADSVKGRFTISRDNAKNTLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCCGGGGGAGGCTTAGTTCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGTGTGGGTCTCACGTATTAATAGTGATGGGAGTAGCACAAGCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACGCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAG | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMHWVRQAPGKGLVWVSRINSDGSSTSYADSVKGRFTISRDNAKNTLYLQMNSLRAEDTAVYYCAR | TTACTATGATAGTAGTGGTTATTAC | YYDSSGYY | TTACTATGATAGTAGTGGTTATTAC | YYDSSGYY | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCCGGGGGAGGCTTAGTTCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGGSLRLSCAAS | GGATTCACCTTCAGTAGCTACTGG | GFTFSSYW | ATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGTGTGGGTCTCACGT | MHWVRQAPGKGLVWVSR | ATTAATAGTGATGGGAGTAGCACA | INSDGSST | AGCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACGCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | SYADSVKGRFTISRDNAKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCAAGAGGAGAAGACGGGATTTACTATGATAGTAGTGGTTATTACGAGCCGGGGTTACCTGACTAC | ARGEDGIYYDSSGYYEPGLPDY | TGTGCAAGAGGAGAAGACGGGATTTACTATGATAGTAGTGGTTATTACGAGCCGGGGTTACCTGACTACTGG | 72.0 | CARGEDGIYYDSSGYYEPGLPDYW | 24.0 | 461.479 | 48.755 | 79.518 | 163S295M164S1N | 471S3N25M126S3N | 510S7N41M71S | 8.738e-132 | 5.877e-10 | 7.012e-19 | 100.0 | 100.0 | 100.0 | 164 | 458 | 1 | 295 | 472.0 | 496.0 | 4.0 | 28.0 | 511 | 551 | 8 | 48 | 164 | 238 | 239 | 262 | 263 | 313 | 314 | 337 | 338 | 451 | 518.0 | 550.0 | 452.0 | 517.0 | GAGAAGACGGGAT | 13 | GAGCCGGGGTTACC | 14.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'W'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'V', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'S', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'S', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'E', '109 ': 'D', '110 ': 'G', '111 ': 'I', '111A': 'Y', '111B': 'Y', '111C': 'D', '111D': 'S', '112E': 'S', '112D': 'G', '112C': 'Y', '112B': 'Y', '112A': 'E', '112 ': 'P', '113 ': 'G', '114 ': 'L', '115 ': 'P', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCCAGGTGTGAATA-1_contig_1 | GAGCTACAACAGGCAGGCAGGGGCAGCAAGATGGTGTTGCAGACCCAGGTCTTCATTTCTCTGTTGCTCTGGATCTCTGGTGCCTACGGGGACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCCCACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV4-1*01 | null | IGKJ2*01 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCCCACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCCCACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPPTFGQGTKLEIK | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPPTFGQGTKLEIK | 1 | 305 | null | null | 306 | 340 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPP | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPP | null | null | null | null | CACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | TFGQGTKLEIK | CACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | TFGQGTKLEIK | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGC | DIVMTQSPDSLAVSLGERATINCKSS | CAGAGTGTTTTATACAGCTCCAACAATAAGAACTAC | QSVLYSSNNKNY | TTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTAC | LAWYQQKPGQPPKLLIY | TGGGCATCT | WAS | ACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGT | TRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAGCAATATTATAGTACTCCTCCCACT | QQYYSTPPT | TGTCAGCAATATTATAGTACTCCTCCCACTTTT | 33.0 | CQQYYSTPPTF | 11.0 | 477.06 | null | 67.981 | 90S305M171S | null | 395S4N35M136S | 1.623e-136 | null | 1.891e-15 | 100.0 | null | 100.0 | 91 | 395 | 1 | 305 | null | null | null | null | 396 | 430 | 5 | 39 | 91 | 168 | 169 | 204 | 205 | 255 | 256 | 264 | 265 | 372 | 400.0 | 429.0 | 373.0 | 399.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'D', '10 ': 'S', '11 ': 'L', '12 ': 'A', '13 ': 'V', '14 ': 'S', '15 ': 'L', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'I', '22 ': 'N', '23 ': 'C', '24 ': 'K', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'L', '31 ': 'Y', '32 ': 'S', '33 ': 'S', '34 ': 'N', '35 ': 'N', '36 ': 'K', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'P', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'W', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'P', '116 ': 'P', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCCAGGTTCCACGG-1_contig_2 | GAGCTCTGGGAGAGGAGCCCAGCACTAGAAGTCGGCGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGATTTAGCAGTGGCTGGTACAGAGAACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30*18 | IGHD6-19*01 | IGHJ6*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGATTTAGCAGTGGCTGGTACAGAGAACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGANNTAGCAGTGGCTGGTACNNNNNACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDLAVAGTENYYGMDVWGQGTTVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXAVAGTXXYYGMDVWGQGTTVTVSS | 1 | 296 | 299.0 | 314.0 | 320 | 372 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | TAGCAGTGGCTGGTAC | AVAGT | TAGCAGTGGCTGGTAC | AVAGT | ACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYGMDVWGQGTTVTVSS | ACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYGMDVWGQGTTVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGGC | GFTFSSYG | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGTAATAAA | ISYDGSNK | TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAAAGATTTAGCAGTGGCTGGTACAGAGAACTACTACGGTATGGACGTC | AKDLAVAGTENYYGMDV | TGTGCGAAAGATTTAGCAGTGGCTGGTACAGAGAACTACTACGGTATGGACGTCTGG | 57.0 | CAKDLAVAGTENYYGMDVW | 19.0 | 463.037 | 31.45 | 102.59 | 137S296M148S | 435S5N16M130S | 456S9N53M72S | 2.762e-132 | 8.874e-05 | 7.417000000000001e-26 | 100.0 | 100.0 | 100.0 | 138 | 433 | 1 | 296 | 436.0 | 451.0 | 6.0 | 21.0 | 457 | 509 | 10 | 62 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 477.0 | 509.0 | 426.0 | 476.0 | TT | 2 | AGAGA | 5.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'D', '108 ': 'L', '109 ': 'A', '110 ': 'V', '111 ': 'A', '111A': 'G', '111B': 'T', '112B': 'E', '112A': 'N', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCCAGGTTCCACGG-1_contig_1 | GGAGTCAGTCCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAGATGTGACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTTCCTTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-9*01 | null | IGKJ3*01 | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTTCCTTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTNNNTTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPSFTFGPGTKVDIK | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPXFTFGPGTKVDIK | 1 | 285 | null | null | 289 | 325 | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCT | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYP | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCT | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYP | null | null | null | null | TTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FTFGPGTKVDIK | TTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FTFGPGTKVDIK | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQLTQSPSFLSASVGDRVTITCRAS | CAGGGCATTAGCAGTTAT | QGISSY | TTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | GCTGCATCC | AAS | ACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGT | TLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYC | TTCGGCCCTGGGACCAAAGTGGATATCAAA | FGPGTKVDIK | CAACAGCTTAATAGTTACCCTTCCTTCACT | QQLNSYPSFT | TGTCAACAGCTTAATAGTTACCCTTCCTTCACTTTC | 36.0 | CQQLNSYPSFTF | 12.0 | 445.898 | null | 71.827 | 92S285M176S2N | null | 380S1N37M136S | 3.807e-127 | null | 1.285e-16 | 100.0 | null | 100.0 | 93 | 377 | 1 | 285 | null | null | null | null | 381 | 417 | 2 | 38 | 93 | 170 | 171 | 188 | 189 | 239 | 240 | 248 | 249 | 356 | 387.0 | 416.0 | 357.0 | 386.0 | TCC | 3 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'F', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'L', '108 ': 'N', '109 ': 'S', '113 ': 'Y', '114 ': 'P', '115 ': 'S', '116 ': 'F', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'P', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'D', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCCAGTCAGCCTAA-1_contig_1 | GAGCTCTGGGAGAGGAGCCCAGCACTAGAAGTCGGCGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGTTCTGTTCCCAAAGAGGGGACCCGGCATCAGCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30*18 | IGHD3-10*01 | IGHJ4*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGTTCTGTTCCCAAAGAGGGGACCCGGCATCAGCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGNNNNNNNNNNNNNNNGGGGANNNNNNNNNNNCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKVLFPKRGPGISYFDYWGQGTLVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXXXXXGXXXXYFDYWGQGTLVTVSS | 1 | 295 | 311.0 | 315.0 | 327 | 373 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GGGGA | G | GGGGA | G | CTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | CTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGGC | GFTFSSYG | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGTAATAAA | ISYDGSNK | TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAAAGTTCTGTTCCCAAAGAGGGGACCCGGCATCAGCTACTTTGACTAC | AKVLFPKRGPGISYFDY | TGTGCGAAAGTTCTGTTCCCAAAGAGGGGACCCGGCATCAGCTACTTTGACTACTGG | 57.0 | CAKVLFPKRGPGISYFDYW | 19.0 | 461.479 | 10.301 | 91.054 | 137S295M149S1N | 447S15N5M129S11N | 463S1N47M71S | 8.134e-132 | 206.4 | 2.203e-22 | 100.0 | 100.0 | 100.0 | 138 | 432 | 1 | 295 | 448.0 | 452.0 | 16.0 | 20.0 | 464 | 510 | 2 | 48 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 477.0 | 509.0 | 426.0 | 476.0 | TTCTGTTCCCAAAGA | 15 | CCCGGCATCAG | 11.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'V', '108 ': 'L', '109 ': 'F', '110 ': 'P', '111 ': 'K', '111A': 'R', '111B': 'G', '112B': 'P', '112A': 'G', '112 ': 'I', '113 ': 'S', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCCAGTCAGCCTAA-1_contig_2 | GGGAGGAATCAGTCCCACTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTGCCAGGTGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-17*01 | null | IGKJ4*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKRLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQHNSYPLTFGGGTKVEIK | DIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKRLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQHNSYPLTFGGGTKVEIK | 1 | 284 | null | null | 285 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCC | DIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKRLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQHNSYP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCC | DIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKRLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQHNSYP | null | null | null | null | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGGGCATTAGAAATGAT | QGIRND | TTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTAT | LGWYQQKPGKAPKRLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGT | SLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CTACAGCATAATAGTTACCCGCTCACT | LQHNSYPLT | TGTCTACAGCATAATAGTTACCCGCTCACTTTC | 33.0 | CLQHNSYPLTF | 11.0 | 444.34 | null | 73.749 | 96S284M174S3N | null | 380S38M136S | 1.123e-126 | null | 3.396e-17 | 100.0 | null | 100.0 | 97 | 380 | 1 | 284 | null | null | null | null | 381 | 418 | 1 | 38 | 97 | 174 | 175 | 192 | 193 | 243 | 244 | 252 | 253 | 360 | 388.0 | 417.0 | 361.0 | 387.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'R', '37 ': 'N', '38 ': 'D'}, 'fwk2': {'39 ': 'L', '40 ': 'G', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'R', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'L', '106 ': 'Q', '107 ': 'H', '108 ': 'N', '109 ': 'S', '114 ': 'Y', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCCAGTCCCTAATT-1_contig_2 | GTGTCTTATATGTGGAGCTCTGGGAGAGGAGCCCCAGCCCTGAGATTCCCAGGTGTTTCCATTCAGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTGGGACTGAGCTGGATTTTCCTTTTGGCTATTTTAAAAGGTGTCCAGTGTGAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTGCAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATCATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATGGTCATAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAGAGATACAACTATAGCAGTGGCTGGTACAATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-9*01 | IGHD6-19*01 | IGHJ4*02 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTGCAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATCATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATGGTCATAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAGAGATACAACTATAGCAGTGGCTGGTACAATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATANNNNTATAGCAGTGGCTGGTACNNTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDHAMHWVRQAPGKGLEWVSGISWNGHSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCARDTTIAVAGTIDYWGQGTLVTVSS | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDXXIAVAGTXDYWGQGTLVTVSS | 1 | 298 | 303.0 | 320.0 | 323 | 364 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTGCAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATCATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATGGTCATAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAGAGATA | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDHAMHWVRQAPGKGLEWVSGISWNGHSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCARD | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATA | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKD | TATAGCAGTGGCTGGTAC | IAVAGT | TATAGCAGTGGCTGGTAC | IAVAGT | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTGCAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGRSLRLSCAAS | GGATTCACCTTTGATGATCATGCC | GFTFDDHA | ATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGT | MHWVRQAPGKGLEWVSG | ATTAGTTGGAATGGTCATAGCATA | ISWNGHSI | GGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGT | GYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCAAGAGATACAACTATAGCAGTGGCTGGTACAATTGACTAC | ARDTTIAVAGTIDY | TGTGCAAGAGATACAACTATAGCAGTGGCTGGTACAATTGACTACTGG | 48.0 | CARDTTIAVAGTIDYW | 16.0 | 447.456 | 35.296 | 81.44 | 152S298M137S | 454S3N18M115S | 474S6N42M71S | 1.369e-127 | 6.238e-06 | 1.743e-19 | 97.987 | 100.0 | 100.0 | 153 | 450 | 1 | 298 | 455.0 | 472.0 | 4.0 | 21.0 | 475 | 516 | 7 | 48 | 153 | 227 | 228 | 251 | 252 | 302 | 303 | 326 | 327 | 440 | 483.0 | 515.0 | 441.0 | 482.0 | CAAC | 4 | AA | 2.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'D', '36 ': 'D', '37 ': 'H', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'G'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'W', '59 ': 'N', '62 ': 'G', '63 ': 'H', '64 ': 'S', '65 ': 'I'}, 'fwh3': {'66 ': 'G', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'L', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'T', '109 ': 'T', '110 ': 'I', '111 ': 'A', '112A': 'V', '112 ': 'A', '113 ': 'G', '114 ': 'T', '115 ': 'I', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCCAGTCCCTAATT-1_contig_1 | TGAGCGCAGAAGGCAGGACTCGGGACAATCTTCATCATGACCTGCTCCCCTCTCCTCCTCACCCTTCTCATTCACTGCACAGGGTCCTGGGCCCAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-51*01 | null | IGLJ2*01 | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSAVVFGGGTKLTVL | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSAVVFGGGTKLTVL | 1 | 295 | null | null | 296 | 331 | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTG | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSA | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTG | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSA | null | null | null | null | TGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGC | QSVLTQPPSVSAAPGQKVTISCSGS | AGCTCCAACATTGGGAATAATTAT | SSNIGNNY | GTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTAT | VSWYQQLPGTAPKLLIY | GACAATAAT | DNN | AAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGC | KRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | GGAACATGGGATAGCAGCCTGAGTGCTGTGGTA | GTWDSSLSAVV | TGCGGAACATGGGATAGCAGCCTGAGTGCTGTGGTATTC | 39.0 | CGTWDSSLSAVVF | 13.0 | 461.479 | null | 69.904 | 93S295M247S1N | null | 388S2N36M211S | 8.93e-132 | null | 5.609e-16 | 100.0 | null | 100.0 | 94 | 388 | 1 | 295 | null | null | null | null | 389 | 424 | 3 | 38 | 94 | 168 | 169 | 192 | 193 | 243 | 244 | 252 | 253 | 360 | 394.0 | 423.0 | 361.0 | 393.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'A', '14 ': 'A', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'K', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'N', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'D', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'G', '91 ': 'I', '92 ': 'T', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'T', '97 ': 'G', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'G', '106 ': 'T', '107 ': 'W', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'L', '114 ': 'S', '115 ': 'A', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCCAGTCCGCGTTT-1_contig_1 | GGGGACTTTCTGAGACTCATGGACCTCCTGCACAAGAACATGAAACACCTGTGGTTCTTCCTCCTGCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGGACCCCTTGGGGGGTGGGAGCTACCACCCTGATGTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-4*07 | IGHD1-26*01 | IGHJ4*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGGACCCCTTGGGGGGTGGGAGCTACCACCCTGATGTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGNNNNNNNNNNNNNGTGGGAGCTACNNNNNNNNNNNACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTMSVDTSKNQFSLKLSSVTAADTAVYYCARTPWGVGATTLMYYFDYWGQGTLVTVSS | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTMSVDTSKNQFSLKLSSVTAADTAVYYCAXXXXXVGATXXXXYFDYWGQGTLVTVSS | 1 | 290 | 304.0 | 314.0 | 326 | 373 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTMSVDTSKNQFSLKLSSVTAADTAVYYCA | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTMSVDTSKNQFSLKLSSVTAADTAVYYCA | GTGGGAGCTAC | VGAT | GTGGGAGCTAC | VGAT | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGTAGTTACTAC | GGSISSYY | TGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGT | WSWIRQPAGKGLEWIGR | ATCTATACCAGTGGGAGCACC | IYTSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGT | NYNPSLKSRVTMSVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGGACCCCTTGGGGGGTGGGAGCTACCACCCTGATGTACTACTTTGACTAC | ARTPWGVGATTLMYYFDY | TGTGCGAGGACCCCTTGGGGGGTGGGAGCTACCACCCTGATGTACTACTTTGACTACTGG | 60.0 | CARTPWGVGATTLMYYFDYW | 20.0 | 453.689 | 21.837 | 92.976 | 96S290M154S3N | 399S6N11M130S3N | 421S48M71S | 1.677e-129 | 0.06452 | 5.392e-23 | 100.0 | 100.0 | 100.0 | 97 | 386 | 1 | 290 | 400.0 | 410.0 | 7.0 | 17.0 | 422 | 469 | 1 | 48 | 97 | 171 | 172 | 195 | 196 | 246 | 247 | 267 | 268 | 381 | 436.0 | 468.0 | 382.0 | 435.0 | GACCCCTTGGGGG | 13 | CACCCTGATGT | 11.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'A', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'T', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'T', '108 ': 'P', '109 ': 'W', '110 ': 'G', '111 ': 'V', '111A': 'G', '111B': 'A', '112C': 'T', '112B': 'T', '112A': 'L', '112 ': 'M', '113 ': 'Y', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCCAGTCCGCGTTT-1_contig_2 | GATCAGGACTCCTCAGTTCACCTTCTCACAATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCTCTGGATCCAGTGGGGATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV2-28*01 | null | IGKJ4*01 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPLTFGGGTKVEIK | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPLTFGGGTKVEIK | 1 | 299 | null | null | 300 | 337 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTP | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTP | null | null | null | null | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGT | DIVMTQSPLSLPVTPGEPASISCRSS | CAGAGCCTCCTGCATAGTAATGGATACAACTAT | QSLLHSNGYNY | TTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTAT | LDWYLQKPGQSPQLLIY | TTGGGTTCT | LGS | AATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGC | NRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | ATGCAAGCTCTACAAACTCCGCTCACT | MQALQTPLT | TGCATGCAAGCTCTACAAACTCCGCTCACTTTC | 33.0 | CMQALQTPLTF | 11.0 | 467.712 | null | 73.749 | 90S299M174S3N | null | 389S38M136S | 1.052e-133 | null | 3.452e-17 | 100.0 | null | 100.0 | 91 | 389 | 1 | 299 | null | null | null | null | 390 | 427 | 1 | 38 | 91 | 168 | 169 | 201 | 202 | 252 | 253 | 261 | 262 | 369 | 397.0 | 426.0 | 370.0 | 396.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'L', '10 ': 'S', '11 ': 'L', '12 ': 'P', '13 ': 'V', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'P', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'L', '30 ': 'L', '31 ': 'H', '32 ': 'S', '34 ': 'N', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'D', '41 ': 'W', '42 ': 'Y', '43 ': 'L', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'Q', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'L', '57 ': 'G', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'K', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'G', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'M', '106 ': 'Q', '107 ': 'A', '108 ': 'L', '109 ': 'Q', '114 ': 'T', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCCAGTCCTGTACC-1_contig_1 | TGGGGACTCAACAACCACATCTGTCCTCTAGAGAAAACCCTGTGAGCACAGCTCCTCACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCTACAAGTGCCCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCCCTGTCAGGGTGGCTGGTGCAAATTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-8*01 | IGHD6-19*01 | IGHJ3*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCCCTGTCAGGGTGGCTGGTGCAAATTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCNNNNNNNNNGTGGCTGGTNNNNNNTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQATGQGLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYCALSGWLVQIDAFDIWGQGTMVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQATGQGLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYCAXXXWLVXXDAFDIWGQGTMVTVSS | 1 | 290 | 300.0 | 308.0 | 315 | 364 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGC | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQATGQGLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYCA | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGC | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQATGQGLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYCA | GTGGCTGGT | WLV | GTGGCTGGT | WLV | TGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | TGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCAGTTATGAT | GYTFTSYD | ATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGG | INWVRQATGQGLEWMGW | ATGAACCCTAACAGTGGTAACACA | MNPNSGNT | GGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | GYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCCCTGTCAGGGTGGCTGGTGCAAATTGATGCTTTTGATATC | ALSGWLVQIDAFDI | TGTGCCCTGTCAGGGTGGCTGGTGCAAATTGATGCTTTTGATATCTGG | 48.0 | CALSGWLVQIDAFDIW | 16.0 | 453.689 | 17.992 | 96.822 | 117S290M145S6N | 416S10N9M127S2N | 431S50M71S | 1.716e-129 | 0.9484 | 3.836e-24 | 100.0 | 100.0 | 100.0 | 118 | 407 | 1 | 290 | 417.0 | 425.0 | 11.0 | 19.0 | 432 | 481 | 1 | 50 | 118 | 192 | 193 | 216 | 217 | 267 | 268 | 291 | 292 | 405 | 448.0 | 480.0 | 406.0 | 447.0 | CCTGTCAGG | 9 | GCAAAT | 6.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'D'}, 'fwh2': {'39 ': 'I', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'T', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'M', '57 ': 'N', '58 ': 'P', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'N', '65 ': 'T'}, 'fwh3': {'66 ': 'G', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'N', '82 ': 'T', '83 ': 'S', '84 ': 'I', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'L', '107 ': 'S', '108 ': 'G', '109 ': 'W', '110 ': 'L', '111 ': 'V', '112A': 'Q', '112 ': 'I', '113 ': 'D', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCCAGTCCTGTACC-1_contig_2 | TTTGGCTCTTGATTTACATTGGGTACTTTCACAACCCACTGCTCATGAAATTTGCTTTTGTACTCACTGGTTGTTTTTGCATAGGCCCCTCCAGGCCACGACCAGCTGTTTGGATTTTATAAACGGGCCGTTTGCATTGTGAACTGAGCTACAACAGGCAGGCAGGGGCAGCAAGATGGTGTTGCAGACCCAGGTCTTCATTTCTCTGTTGCTCTGGATCTCTGGTGCCTACGGGGACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCCGGCGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV4-1*01 | null | IGKJ1*01 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCCGGCGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCCNNCGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPPAFGQGTKVEIK | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPPXFGQGTKVEIK | 1 | 305 | null | null | 308 | 340 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPP | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPP | null | null | null | null | CGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | FGQGTKVEIK | CGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | FGQGTKVEIK | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGC | DIVMTQSPDSLAVSLGERATINCKSS | CAGAGTGTTTTATACAGCTCCAACAATAAGAACTAC | QSVLYSSNNKNY | TTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTAC | LAWYQQKPGQPPKLLIY | TGGGCATCT | WAS | ACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGT | TRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAATATTATAGTACTCCTCCGGCG | QQYYSTPPA | TGTCAGCAATATTATAGTACTCCTCCGGCGTTC | 33.0 | CQQYYSTPPAF | 11.0 | 477.06 | null | 64.136 | 235S305M171S | null | 542S5N33M136S | 2.0499999999999997e-136 | null | 3.429e-14 | 100.0 | null | 100.0 | 236 | 540 | 1 | 305 | null | null | null | null | 543 | 575 | 6 | 38 | 236 | 313 | 314 | 349 | 350 | 400 | 401 | 409 | 410 | 517 | 545.0 | 574.0 | 518.0 | 544.0 | GG | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'D', '10 ': 'S', '11 ': 'L', '12 ': 'A', '13 ': 'V', '14 ': 'S', '15 ': 'L', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'I', '22 ': 'N', '23 ': 'C', '24 ': 'K', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'L', '31 ': 'Y', '32 ': 'S', '33 ': 'S', '34 ': 'N', '35 ': 'N', '36 ': 'K', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'P', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'W', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'P', '116 ': 'P', '117 ': 'A'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCCAGTCCTGTAGA-1_contig_1 | ACCATCACACAACAGCCACATCCCTCCCCTACAGAAGCCCCCAGAGCGCAGCACCTCACCATGGACTGCACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCTACAGGCACCCACGCCCAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCAACAGTGCGATATTTTGACTGGTTAAAGGGCCATGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-24*01 | IGHD3-9*01 | IGHJ4*02 | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCAACAGTGCGATATTTTGACTGGTTAAAGGGCCATGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCAACAGNNCGATATTTTGACTGGTTANNNNNNNNNNNCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCATVRYFDWLKGHGFDYWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCATXRYFDWLXXXXFDYWGQGTLVTVSS | 1 | 295 | 298.0 | 315.0 | 327 | 370 | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCAACAG | QVQLVQSGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCAT | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCAACAG | QVQLVQSGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCAT | CGATATTTTGACTGGTTA | RYFDWL | CGATATTTTGACTGGTTA | RYFDWL | CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCC | QVQLVQSGAEVKKPGASVKVSCKVS | GGATACACCCTCACTGAATTATCC | GYTLTELS | ATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGT | MHWVRQAPGKGLEWMGG | TTTGATCCTGAAGATGGTGAAACA | FDPEDGET | ATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | IYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCAACAGTGCGATATTTTGACTGGTTAAAGGGCCATGGCTTTGACTAC | ATVRYFDWLKGHGFDY | TGTGCAACAGTGCGATATTTTGACTGGTTAAAGGGCCATGGCTTTGACTACTGG | 54.0 | CATVRYFDWLKGHGFDYW | 18.0 | 461.479 | 35.296 | 85.286 | 117S295M146S1N | 414S6N18M126S7N | 443S4N44M71S | 7.839e-132 | 5.925e-06 | 1.1520000000000001e-20 | 100.0 | 100.0 | 100.0 | 118 | 412 | 1 | 295 | 415.0 | 432.0 | 7.0 | 24.0 | 444 | 487 | 5 | 48 | 118 | 192 | 193 | 216 | 217 | 267 | 268 | 291 | 292 | 405 | 454.0 | 486.0 | 406.0 | 453.0 | TG | 2 | AAGGGCCATGG | 11.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'L', '35 ': 'T', '36 ': 'E', '37 ': 'L', '38 ': 'S'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'G'}, 'cdrh2': {'56 ': 'F', '57 ': 'D', '58 ': 'P', '59 ': 'E', '62 ': 'D', '63 ': 'G', '64 ': 'E', '65 ': 'T'}, 'fwh3': {'66 ': 'I', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'E', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'T', '85 ': 'D', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'T', '107 ': 'V', '108 ': 'R', '109 ': 'Y', '110 ': 'F', '111 ': 'D', '111A': 'W', '112B': 'L', '112A': 'K', '112 ': 'G', '113 ': 'H', '114 ': 'G', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCCAGTCCTGTAGA-1_contig_2 | TGGGGAGAGCTCTGGGGAGGAACTGCTCAGTTAGGACCCAGACGGAACCATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACTGGAGAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCCGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-15*01 | null | IGKJ5*01 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCCGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCCGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPPITFGQGTRLEIK | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPPITFGQGTRLEIK | 1 | 287 | null | null | 288 | 325 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPP | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPP | null | null | null | null | GATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | GATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVMTQSPATLSVSPGERATLSCRAS | CAGAGTGTTAGCAGCAAC | QSVSSN | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | ACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGT | TRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYC | TTCGGCCAAGGGACACGACTGGAGATTAAA | FGQGTRLEIK | CAGCAGTATAATAACTGGCCTCCGATCACC | QQYNNWPPIT | TGTCAGCAGTATAATAACTGGCCTCCGATCACCTTC | 36.0 | CQQYNNWPPITF | 12.0 | 449.014 | null | 73.749 | 109S287M174S | null | 396S38M136S | 4.5320000000000005e-128 | null | 3.496e-17 | 100.0 | null | 100.0 | 110 | 396 | 1 | 287 | null | null | null | null | 397 | 434 | 1 | 38 | 110 | 187 | 188 | 205 | 206 | 256 | 257 | 265 | 266 | 373 | 404.0 | 433.0 | 374.0 | 403.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'N'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'N', '113 ': 'W', '114 ': 'P', '115 ': 'P', '116 ': 'I', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'R', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCCGAAGACTGTAA-1_contig_1 | GAGCTCTGGGAGAGGAGCCCAGCACTAGAAGTCGGCGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGATAACGATTTTTGGAGTGGTTATTATAGCGGGGTCGGCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30*18 | IGHD3-3*01 | IGHJ6*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGATAACGATTTTTGGAGTGGTTATTATAGCGGGGTCGGCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGANNACGATTTTTGGAGTGGTTATTATANNNNNNNNNNCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDNDFWSGYYSGVGYYGMDVWGQGTTVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXDFWSGYYXXXXYYGMDVWGQGTTVTVSS | 1 | 296 | 299.0 | 322.0 | 333 | 384 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | ACGATTTTTGGAGTGGTTATTATA | DFWSGYY | ACGATTTTTGGAGTGGTTATTATA | DFWSGYY | CTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYGMDVWGQGTTVTVSS | CTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYGMDVWGQGTTVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGGC | GFTFSSYG | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGTAATAAA | ISYDGSNK | TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAAAGATAACGATTTTTGGAGTGGTTATTATAGCGGGGTCGGCTACTACGGTATGGACGTC | AKDNDFWSGYYSGVGYYGMDV | TGTGCGAAAGATAACGATTTTTGGAGTGGTTATTATAGCGGGGTCGGCTACTACGGTATGGACGTCTGG | 69.0 | CAKDNDFWSGYYSGVGYYGMDVW | 23.0 | 463.037 | 46.832 | 100.667 | 137S296M160S | 435S5N24M134S2N | 469S10N52M72S | 2.822e-132 | 2.122e-09 | 2.871e-25 | 100.0 | 100.0 | 100.0 | 138 | 433 | 1 | 296 | 436.0 | 459.0 | 6.0 | 29.0 | 470 | 521 | 11 | 62 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 489.0 | 521.0 | 426.0 | 488.0 | TA | 2 | GCGGGGTCGG | 10.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'D', '108 ': 'N', '109 ': 'D', '110 ': 'F', '111 ': 'W', '111A': 'S', '111B': 'G', '111C': 'Y', '111D': 'Y', '112D': 'S', '112C': 'G', '112B': 'V', '112A': 'G', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCCGAAGACTGTAA-1_contig_2 | TGGGAGGAGTCAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCTTTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ2*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCTTTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCNNTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTLYTFGQGTKLEIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTXYTFGQGTKLEIK | 1 | 283 | null | null | 286 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYST | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYST | null | null | null | null | TACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | TACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAACAGAGTTACAGTACCCTTTACACT | QQSYSTLYT | TGTCAACAGAGTTACAGTACCCTTTACACTTTT | 33.0 | CQQSYSTLYTF | 11.0 | 442.782 | null | 71.827 | 97S283M175S4N | null | 382S2N37M136S | 3.313e-126 | null | 1.29e-16 | 100.0 | null | 100.0 | 98 | 380 | 1 | 283 | null | null | null | null | 383 | 419 | 3 | 39 | 98 | 175 | 176 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 389.0 | 418.0 | 362.0 | 388.0 | TT | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'L', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCCGAAGCCAGTTT-1_contig_2 | AGCTCTGGGAGAGGAGCCCCAGCCTTGGGATTCCCAAGTGTTTTCATTCAGTGATCAGGACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGATTTTCCTTGCTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACGTTCATAGCAGCAGCTGGAACCGAAACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-15*01 | IGHD6-13*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACGTTCATAGCAGCAGCTGGAACCGAAACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACNNNNATAGCAGCAGCTGGNNNNNNNNNTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTFIAAAGTETDYWGQGTLVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTXIAAAGXXXDYWGQGTLVTVSS | 1 | 299 | 304.0 | 317.0 | 327 | 367 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCAC | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCAC | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | ATAGCAGCAGCTGG | IAAAG | ATAGCAGCAGCTGG | IAAAG | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACTTTCAGTAACGCCTGG | GFTFSNAW | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGT | MSWVRQAPGKGLEWVGR | ATTAAAAGCAAAACTGATGGTGGGACAACA | IKSKTDGGTT | GACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGT | DYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | ACCACGTTCATAGCAGCAGCTGGAACCGAAACTGACTAC | TTFIAAAGTETDY | TGTACCACGTTCATAGCAGCAGCTGGAACCGAAACTGACTACTGG | 45.0 | CTTFIAAAGTETDYW | 15.0 | 467.712 | 27.605 | 79.518 | 137S299M139S3N | 440S4N14M121S3N | 463S7N41M71S | 1.07e-133 | 0.001262 | 6.472e-19 | 100.0 | 100.0 | 100.0 | 138 | 436 | 1 | 299 | 441.0 | 454.0 | 5.0 | 18.0 | 464 | 504 | 8 | 48 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 317 | 318 | 431 | 471.0 | 503.0 | 432.0 | 470.0 | GTTC | 4 | AACCGAAAC | 9.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'N', '37 ': 'A', '38 ': 'W'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'K', '58 ': 'S', '59 ': 'K', '60 ': 'T', '61 ': 'D', '62 ': 'G', '63 ': 'G', '64 ': 'T', '65 ': 'T'}, 'fwh3': {'66 ': 'D', '67 ': 'Y', '68 ': 'A', '69 ': 'A', '70 ': 'P', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'D', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'T', '106 ': 'T', '107 ': 'F', '108 ': 'I', '109 ': 'A', '110 ': 'A', '111 ': 'A', '112 ': 'G', '113 ': 'T', '114 ': 'E', '115 ': 'T', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCCGAAGCCAGTTT-1_contig_1 | GCTGTGCTGTGGGTCCAGGAGGCAGAACTCTGGGTGTCTCACCATGGCCTGGATCCCTCTACTTCTCCCCCTCCTCACTCTCTGCACAGGCTCTGAGGCCTCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-25*03 | null | IGLJ2*01 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTVVFGGGTKLTVL | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTVVFGGGTKLTVL | 1 | 285 | null | null | 286 | 322 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACT | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGT | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACT | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGT | null | null | null | null | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTARITCSGD | GCATTGCCAAAGCAATAT | ALPKQY | GCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATAT | AYWYQQKPGQAPVLVIY | AAAGACAGT | KDS | GAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGT | ERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAATCAGCAGACAGCAGTGGTACTGTGGTA | QSADSSGTVV | TGTCAATCAGCAGACAGCAGTGGTACTGTGGTATTC | 36.0 | CQSADSSGTVVF | 12.0 | 445.898 | null | 71.827 | 100S285M248S5N | null | 385S1N37M211S | 4.363e-127 | null | 1.475e-16 | 100.0 | null | 100.0 | 101 | 385 | 1 | 285 | null | null | null | null | 386 | 422 | 2 | 38 | 101 | 175 | 176 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 392.0 | 421.0 | 362.0 | 391.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'A', '28 ': 'L', '29 ': 'P', '36 ': 'K', '37 ': 'Q', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'Y', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'K', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'E', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'S', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'T', '87 ': 'V', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'V', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'S', '107 ': 'A', '108 ': 'D', '109 ': 'S', '113 ': 'S', '114 ': 'G', '115 ': 'T', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCCGAAGTCCATAC-1_contig_2 | TGGGGACCCAAAAACCACACCCCTCCTTGGGAGAATCCCCTAGATCACAGCTCCTCACCATGGACTGGACCTGGAGCATCCTTTTCTTGGTGGCAGCAGCAACAGGTGCCCACTCCCAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGGCTGGGGCAGTGGCTGGTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-18*01 | IGHD6-19*01 | IGHJ6*02 | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGGCTGGGGCAGTGGCTGGTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGNNNNNNGCAGTGGCTGGTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARLGQWLVYGMDVWGQGTTVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAXXXQWLVYGMDVWGQGTTVTVSS | 1 | 293 | 300.0 | 311.0 | 312 | 360 | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCA | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCA | GCAGTGGCTGGT | QWLV | GCAGTGGCTGGT | QWLV | CTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YGMDVWGQGTTVTVSS | CTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YGMDVWGQGTTVTVSS | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGTTACACCTTTACCAGCTATGGT | GYTFTSYG | ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGG | ISWVRQAPGQGLEWMGW | ATCAGCGCTTACAATGGTAACACA | ISAYNGNT | AACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGGCTGGGGCAGTGGCTGGTCTACGGTATGGACGTC | ARLGQWLVYGMDV | TGTGCGAGGCTGGGGCAGTGGCTGGTCTACGGTATGGACGTCTGG | 45.0 | CARLGQWLVYGMDVW | 15.0 | 458.363 | 23.76 | 94.899 | 116S293M139S3N | 415S7N12M121S2N | 427S13N49M72S | 6.669e-131 | 0.01727 | 1.444e-23 | 100.0 | 100.0 | 100.0 | 117 | 409 | 1 | 293 | 416.0 | 427.0 | 8.0 | 19.0 | 428 | 476 | 14 | 62 | 117 | 191 | 192 | 215 | 216 | 266 | 267 | 290 | 291 | 404 | 444.0 | 476.0 | 405.0 | 443.0 | GCTGGG | 6 | null | 0.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'I', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'A', '59 ': 'Y', '62 ': 'N', '63 ': 'G', '64 ': 'N', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'L', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'T', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'R', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'L', '108 ': 'G', '109 ': 'Q', '110 ': 'W', '111 ': 'L', '112 ': 'V', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCCGAAGTCCATAC-1_contig_1 | GCTGGGGTCTCAGGAGGCAGCGCTCTCAGGACGTCACCACCATGGCCTGGGCTCTGCTCCTCCTCACCCTCCTCACTCAGGGCACAGGGTCCTGGGCCCAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACAATTTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV2-8*01 | null | IGLJ2*01 | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACAATTTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACAATTTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSNNLVFGGGTKLTVL | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSNNLVFGGGTKLTVL | 1 | 296 | null | null | 297 | 331 | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACAATTT | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSNN | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCAGCTCATATGCAGGCAGCAACAATTT | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSNN | null | null | null | null | GGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | CAGTCTGCCCTGACTCAGCCTCCCTCCGCGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCACTGGAACC | QSALTQPPSASGSPGQSVTISCTGT | AGCAGTGACGTTGGTGGTTATAACTAT | SSDVGGYNY | GTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTAT | VSWYQQHPGKAPKLMIY | GAGGTCAGT | EVS | AAGCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCGTCTCTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGC | KRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | AGCTCATATGCAGGCAGCAACAATTTGGTA | SSYAGSNNLV | TGCAGCTCATATGCAGGCAGCAACAATTTGGTATTC | 36.0 | CSSYAGSNNLVF | 12.0 | 463.037 | null | 67.981 | 98S296M246S1N | null | 394S3N35M211S | 3.057e-132 | null | 2.144e-15 | 100.0 | null | 100.0 | 99 | 394 | 1 | 296 | null | null | null | null | 395 | 429 | 4 | 38 | 99 | 173 | 174 | 200 | 201 | 251 | 252 | 260 | 261 | 368 | 399.0 | 428.0 | 369.0 | 398.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'A', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'A', '12 ': 'S', '13 ': 'G', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'S', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'T'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'D', '30 ': 'V', '31 ': 'G', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'M', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'V', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'V', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'S', '106 ': 'S', '107 ': 'Y', '108 ': 'A', '109 ': 'G', '113 ': 'S', '114 ': 'N', '115 ': 'N', '116 ': 'L', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCCGACAATCGGTT-1_contig_2 | AGCTCTGAGAGAGGAGCCTTAGCCCTGGATTCCAAGGCCTATCCACTTGGTGATCAGCACTGAGCACCGAGGATTCACCATGGAACTGGGGCTCCGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATAAACCCCTATTGTATAGCAGTGGCTGGTACGGTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-21*01 | IGHD6-19*01 | IGHJ3*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATAAACCCCTATTGTATAGCAGTGGCTGGTACGGTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGANNNNNNNNNNNNGTATAGCAGTGGCTGGTACNNTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDKPLLYSSGWYGAFDIWGQGTMVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARXXXXXYSSGWYXAFDIWGQGTMVTVSS | 1 | 296 | 309.0 | 327.0 | 330 | 376 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GTATAGCAGTGGCTGGTAC | YSSGWY | GTATAGCAGTGGCTGGTAC | YSSGWY | TGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | TGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACCTTCAGTAGCTATAGC | GFTFSSYS | ATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCC | MNWVRQAPGKGLEWVSS | ATTAGTAGTAGTAGTAGTTACATA | ISSSSSYI | TACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGAGAGATAAACCCCTATTGTATAGCAGTGGCTGGTACGGTGCTTTTGATATC | ARDKPLLYSSGWYGAFDI | TGTGCGAGAGATAAACCCCTATTGTATAGCAGTGGCTGGTACGGTGCTTTTGATATCTGG | 60.0 | CARDKPLLYSSGWYGAFDIW | 20.0 | 463.037 | 37.218 | 91.054 | 136S296M151S | 444S2N19M120S | 465S3N47M71S | 2.772e-132 | 1.634e-06 | 2.21e-22 | 100.0 | 100.0 | 100.0 | 137 | 432 | 1 | 296 | 445.0 | 463.0 | 3.0 | 21.0 | 466 | 512 | 4 | 50 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 479.0 | 511.0 | 425.0 | 478.0 | TAAACCCCTATT | 12 | GG | 2.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'S'}, 'fwh2': {'39 ': 'M', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'S', '59 ': 'S', '62 ': 'S', '63 ': 'S', '64 ': 'Y', '65 ': 'I'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'K', '109 ': 'P', '110 ': 'L', '111 ': 'L', '111A': 'Y', '111B': 'S', '112C': 'S', '112B': 'G', '112A': 'W', '112 ': 'Y', '113 ': 'G', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCCGACAATCGGTT-1_contig_1 | GGGAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ1*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPRTFGQGTKVEIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPRTFGQGTKVEIK | 1 | 286 | null | null | 287 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | null | null | null | null | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAACAGAGTTACAGTACCCCTCGGACG | QQSYSTPRT | TGTCAACAGAGTTACAGTACCCCTCGGACGTTC | 33.0 | CQQSYSTPRTF | 11.0 | 447.456 | null | 69.904 | 89S286M172S1N | null | 375S2N36M136S | 1.278e-127 | null | 4.818e-16 | 100.0 | null | 100.0 | 90 | 375 | 1 | 286 | null | null | null | null | 376 | 411 | 3 | 38 | 90 | 167 | 168 | 185 | 186 | 236 | 237 | 245 | 246 | 353 | 381.0 | 410.0 | 354.0 | 380.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'P', '116 ': 'R', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCCGACAGGCAGTA-1_contig_2 | GGGGAGGGTCCTGCTCACATGGGAAATACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACACCTGTGGTTCTTCCTCCTGCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGTGTACTTTACGATTTTTGGAGTGGTTATTATTTTGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-31*03 | IGHD3-3*01 | IGHJ4*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGTGTACTTTACGATTTTTGGAGTGGTTATTATTTTGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGNNNNNNTTACGATTTTTGGAGTGGTTATTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCASVLYDFWSGYYFGYWGQGTLVTVSS | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAXXXYDFWSGYYFDYWGQGTLVTVSS | 1 | 296 | 303.0 | 327.0 | 328 | 370 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | TTACGATTTTTGGAGTGGTTATTAT | YDFWSGYY | TTACGATTTTTGGAGTGGTTATTAT | YDFWSGYY | TTTGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FGYWGQGTLVTVSS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSQTLSLTCTVS | GGTGGCTCCATCAGCAGTGGTGGTTACTAC | GGSISSGGYY | TGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTAC | WSWIRQHPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGTGTACTTTACGATTTTTGGAGTGGTTATTATTTTGGCTAC | ASVLYDFWSGYYFGY | TGTGCGAGTGTACTTTACGATTTTTGGAGTGGTTATTATTTTGGCTACTGG | 51.0 | CASVLYDFWSGYYFGYW | 17.0 | 463.037 | 48.755 | 77.595 | 119S296M145S3N | 421S3N25M114S3N | 446S5N43M71S | 2.6720000000000003e-132 | 5.281e-10 | 2.389e-18 | 100.0 | 100.0 | 97.674 | 120 | 415 | 1 | 296 | 422.0 | 446.0 | 4.0 | 28.0 | 447 | 489 | 6 | 48 | 120 | 194 | 195 | 224 | 225 | 275 | 276 | 296 | 297 | 410 | 456.0 | 488.0 | 411.0 | 455.0 | TGTACT | 6 | null | 0.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'G', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'S', '107 ': 'V', '108 ': 'L', '109 ': 'Y', '110 ': 'D', '111 ': 'F', '111A': 'W', '112A': 'S', '112 ': 'G', '113 ': 'Y', '114 ': 'Y', '115 ': 'F', '116 ': 'G', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCCGACAGGCAGTA-1_contig_1 | AGAGCTCTGGAGAAGAGCTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCTTCGTGGAGGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-20*01 | null | IGKJ1*01 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCTTCGTGGAGGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCNNNGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSSWRFGQGTKVEIK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSXWTFGQGTKVEIK | 1 | 284 | null | null | 288 | 325 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSS | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSS | null | null | null | null | GTGGAGGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WRFGQGTKVEIK | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPGTLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCAGCTAC | QSVSSSY | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAGTATGGTAGCTCTTCGTGGAGG | QQYGSSSWR | TGTCAGCAGTATGGTAGCTCTTCGTGGAGGTTC | 33.0 | CQQYGSSSWRF | 11.0 | 444.34 | null | 67.981 | 104S284M177S6N | null | 391S38M136S | 1.147e-126 | null | 1.888e-15 | 100.0 | null | 97.368 | 105 | 388 | 1 | 284 | null | null | null | null | 392 | 429 | 1 | 38 | 105 | 182 | 183 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 399.0 | 428.0 | 372.0 | 398.0 | TTC | 3 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'G', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'G', '109 ': 'S', '114 ': 'S', '115 ': 'S', '116 ': 'W', '117 ': 'R'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCCGACATCCGGGT-1_contig_1 | ATACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACATCTGTGGTTCTTCCTTCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCGTGGATACAGCTATGGTCTTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGCACCCACCAAGGCTCCGGATGTGTTCCCCATCATATCAGGGTGCAGACACCCAAAGGATAACAGCCCTGTGGTCCTGGCATGCTTGATAACTGGGTACCACC | H | F | T | F | T | F | T | IGHV4-59*01 | IGHD5-18*01 | IGHJ4*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCGTGGATACAGCTATGGTCTTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGANNGTGGATACAGCTATGGTNNNTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARDRGYSYGLFDYWGQGTLVTVSS | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXGYSYGXFDYWGQGTLVTVSS | 1 | 293 | 296.0 | 312.0 | 316 | 358 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | GTGGATACAGCTATGGT | GYSYG | GTGGATACAGCTATGGT | GYSYG | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGTAGTTACTAC | GGSISSYY | TGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTAT | WSWIRQPPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGATCGTGGATACAGCTATGGTCTTTTTGACTAC | ARDRGYSYGLFDY | TGTGCGAGAGATCGTGGATACAGCTATGGTCTTTTTGACTACTGG | 45.0 | CARDRGYSYGLFDYW | 15.0 | 458.363 | 33.373 | 83.363 | 94S293M167S | 389S17M148S3N | 409S5N43M102S | 6.746e-131 | 2.23e-05 | 4.335e-20 | 100.0 | 100.0 | 100.0 | 95 | 387 | 1 | 293 | 390.0 | 406.0 | 1.0 | 17.0 | 410 | 452 | 6 | 48 | 95 | 169 | 170 | 193 | 194 | 244 | 245 | 265 | 266 | 379 | 419.0 | 451.0 | 380.0 | 418.0 | TC | 2 | CTT | 3.0 | CACCCACCAAGGCTCCGGATGTGTTCCCCATCATATCAGGGTGCAGACACCCAAAGGATAACAGCCCTGTGGTCCTGGCATGCTTGATAACTGGGTACCACC | IGHD | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'R', '109 ': 'G', '110 ': 'Y', '111 ': 'S', '112 ': 'Y', '113 ': 'G', '114 ': 'L', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCCGACATCCGGGT-1_contig_2 | TCTGGCGCCAGGGGTCCCTTCCAATATCAGCACCATGGCCTGGACTCCTCTCTTTCTGTTCCTCCTCACTTGCTGCCCAGGGTCCAATTCTCAGACTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGCTTCCAGCACTGGAGCAGTCACCAGTGGTTACTATCCAAACTGGTTCCAGCAGAAACCTGGACAAGCACCCAGGGCACTGATTTATAGTACAAGCAACAAACACTCCTGGACCCCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACACTGTCAGGTGTGCAGCCTGAGGACGAGGCTGAGTATTACTGCCTGCTCTACTATGGTGGTGCTCGGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV7-43*01 | null | IGLJ2*01 | CAGACTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGCTTCCAGCACTGGAGCAGTCACCAGTGGTTACTATCCAAACTGGTTCCAGCAGAAACCTGGACAAGCACCCAGGGCACTGATTTATAGTACAAGCAACAAACACTCCTGGACCCCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACACTGTCAGGTGTGCAGCCTGAGGACGAGGCTGAGTATTACTGCCTGCTCTACTATGGTGGTGCTCGGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGACTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGCTTCCAGCACTGGAGCAGTCACCAGTGGTTACTATCCAAACTGGTTCCAGCAGAAACCTGGACAAGCACCCAGGGCACTGATTTATAGTACAAGCAACAAACACTCCTGGACCCCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACACTGTCAGGTGTGCAGCCTGAGGACGAGGCTGAGTATTACTGCCTGCTCTACTATGGTGGTGCTCNGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QTVVTQEPSLTVSPGGTVTLTCASSTGAVTSGYYPNWFQQKPGQAPRALIYSTSNKHSWTPARFSGSLLGGKAALTLSGVQPEDEAEYYCLLYYGGARVFGGGTKLTVL | QTVVTQEPSLTVSPGGTVTLTCASSTGAVTSGYYPNWFQQKPGQAPRALIYSTSNKHSWTPARFSGSLLGGKAALTLSGVQPEDEAEYYCLLYYGGAXVFGGGTKLTVL | 1 | 292 | null | null | 294 | 328 | CAGACTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGCTTCCAGCACTGGAGCAGTCACCAGTGGTTACTATCCAAACTGGTTCCAGCAGAAACCTGGACAAGCACCCAGGGCACTGATTTATAGTACAAGCAACAAACACTCCTGGACCCCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACACTGTCAGGTGTGCAGCCTGAGGACGAGGCTGAGTATTACTGCCTGCTCTACTATGGTGGTGCTC | QTVVTQEPSLTVSPGGTVTLTCASSTGAVTSGYYPNWFQQKPGQAPRALIYSTSNKHSWTPARFSGSLLGGKAALTLSGVQPEDEAEYYCLLYYGGA | CAGACTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGCTTCCAGCACTGGAGCAGTCACCAGTGGTTACTATCCAAACTGGTTCCAGCAGAAACCTGGACAAGCACCCAGGGCACTGATTTATAGTACAAGCAACAAACACTCCTGGACCCCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACACTGTCAGGTGTGCAGCCTGAGGACGAGGCTGAGTATTACTGCCTGCTCTACTATGGTGGTGCTC | QTVVTQEPSLTVSPGGTVTLTCASSTGAVTSGYYPNWFQQKPGQAPRALIYSTSNKHSWTPARFSGSLLGGKAALTLSGVQPEDEAEYYCLLYYGGA | null | null | null | null | GGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | CAGACTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGCTTCCAGC | QTVVTQEPSLTVSPGGTVTLTCASS | ACTGGAGCAGTCACCAGTGGTTACTAT | TGAVTSGYY | CCAAACTGGTTCCAGCAGAAACCTGGACAAGCACCCAGGGCACTGATTTAT | PNWFQQKPGQAPRALIY | AGTACAAGC | STS | AACAAACACTCCTGGACCCCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACACTGTCAGGTGTGCAGCCTGAGGACGAGGCTGAGTATTACTGC | NKHSWTPARFSGSLLGGKAALTLSGVQPEDEAEYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CTGCTCTACTATGGTGGTGCTCGGGTA | LLYYGGARV | TGCCTGCTCTACTATGGTGGTGCTCGGGTATTC | 33.0 | CLLYYGGARVF | 11.0 | 456.805 | null | 67.981 | 91S292M247S2N | null | 384S3N35M211S | 2.261e-130 | null | 2.11e-15 | 100.0 | null | 100.0 | 92 | 383 | 1 | 292 | null | null | null | null | 385 | 419 | 4 | 38 | 92 | 166 | 167 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 389.0 | 418.0 | 362.0 | 388.0 | G | 1 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'T', '3 ': 'V', '4 ': 'V', '5 ': 'T', '6 ': 'Q', '7 ': 'E', '8 ': 'P', '9 ': 'S', '11 ': 'L', '12 ': 'T', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'T', '19 ': 'V', '20 ': 'T', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'A', '25 ': 'S', '26 ': 'S'}, 'cdrl1': {'27 ': 'T', '28 ': 'G', '29 ': 'A', '30 ': 'V', '31 ': 'T', '35 ': 'S', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwl2': {'39 ': 'P', '40 ': 'N', '41 ': 'W', '42 ': 'F', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'A', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'S', '57 ': 'T', '65 ': 'S'}, 'fwl3': {'66 ': 'N', '67 ': 'K', '68 ': 'H', '69 ': 'S', '70 ': 'W', '71 ': 'T', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'L', '83 ': 'L', '84 ': 'G', '85 ': 'G', '86 ': 'K', '87 ': 'A', '88 ': 'A', '89 ': 'L', '90 ': 'T', '91 ': 'L', '92 ': 'S', '93 ': 'G', '94 ': 'V', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'E', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'L', '106 ': 'L', '107 ': 'Y', '108 ': 'Y', '109 ': 'G', '114 ': 'G', '115 ': 'A', '116 ': 'R', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCCGACATTCCTCG-1_contig_1 | TGGGGACCCAAAAACCACACCCCTCCTTGGGAGAATCCCCTAGATCACAGCTCCTCACCATGGACTGGACCTGGAGCATCCTTTTCTTGGTGGCAGCAGCAACAGGTGCCCACTCCCAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGTGGGGCAACTAACAACTATGATAGTAGTGGTTATTACTACCAATCCTTTGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-18*01 | IGHD3-22*01 | IGHJ4*02 | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGTGGGGCAACTAACAACTATGATAGTAGTGGTTATTACTACCAATCCTTTGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGNNNNNNNNNNNNNNACTATGATAGTAGTGGTTATTACTACNNNNNCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCASGATNNYDSSGYYYQSFEYWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAXXXXXXYDSSGYYYXXFDYWGQGTLVTVSS | 1 | 293 | 308.0 | 333.0 | 339 | 382 | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCA | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCA | ACTATGATAGTAGTGGTTATTACTAC | YDSSGYYY | ACTATGATAGTAGTGGTTATTACTAC | YDSSGYYY | CTTTGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FEYWGQGTLVTVSS | CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGTTACACCTTTACCAGCTATGGT | GYTFTSYG | ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGG | ISWVRQAPGQGLEWMGW | ATCAGCGCTTACAATGGTAACACA | ISAYNGNT | AACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGTGGGGCAACTAACAACTATGATAGTAGTGGTTATTACTACCAATCCTTTGAGTAC | ASGATNNYDSSGYYYQSFEY | TGTGCGAGTGGGGCAACTAACAACTATGATAGTAGTGGTTATTACTACCAATCCTTTGAGTACTGG | 66.0 | CASGATNNYDSSGYYYQSFEYW | 22.0 | 458.363 | 50.677 | 79.518 | 116S293M160S3N | 423S5N26M120S | 454S4N44M71S | 6.939000000000005e-131 | 1.416e-10 | 6.403e-19 | 100.0 | 100.0 | 97.727 | 117 | 409 | 1 | 293 | 424.0 | 449.0 | 6.0 | 31.0 | 455 | 498 | 5 | 48 | 117 | 191 | 192 | 215 | 216 | 266 | 267 | 290 | 291 | 404 | 465.0 | 497.0 | 405.0 | 464.0 | TGGGGCAACTAACA | 14 | CAATC | 5.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'I', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'A', '59 ': 'Y', '62 ': 'N', '63 ': 'G', '64 ': 'N', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'L', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'T', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'R', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'S', '107 ': 'G', '108 ': 'A', '109 ': 'T', '110 ': 'N', '111 ': 'N', '111A': 'Y', '111B': 'D', '111C': 'S', '112D': 'S', '112C': 'G', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Q', '114 ': 'S', '115 ': 'F', '116 ': 'E', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCCGACATTCCTCG-1_contig_2 | GCTGCGGGTAGAGAAGACAGGACTCAGGACAATCTCCAGCATGGCCTGGTCCCCTCTCTTCCTCACCCTCATCACTCACTGTGCAGGGTCCTGGGCCCAGTCTGTGCTGACTCAGCCACCCTCGGTGTCTGAAGCCCCCAGGCAGAGGGTCACCATCTCCTGTTCTGGAAGCAGCTCCAACATCGGAAATAATGCTGTAAACTGGTACCAGCAGCTCCCAGGAAAGGCTCCCAAACTCCTCATCTATTATGATGATCTGCTGCCCTCAGGGGTCTCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTCTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-36*01 | null | IGLJ2*01 | CAGTCTGTGCTGACTCAGCCACCCTCGGTGTCTGAAGCCCCCAGGCAGAGGGTCACCATCTCCTGTTCTGGAAGCAGCTCCAACATCGGAAATAATGCTGTAAACTGGTACCAGCAGCTCCCAGGAAAGGCTCCCAAACTCCTCATCTATTATGATGATCTGCTGCCCTCAGGGGTCTCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTCTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGCTGACTCAGCCACCCTCGGTGTCTGAAGCCCCCAGGCAGAGGGTCACCATCTCCTGTTCTGGAAGCAGCTCCAACATCGGAAATAATGCTGTAAACTGGTACCAGCAGCTCCCAGGAAAGGCTCCCAAACTCCTCATCTATTATGATGATCTGCTGCCCTCAGGGGTCTCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTCTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSVSEAPRQRVTISCSGSSSNIGNNAVNWYQQLPGKAPKLLIYYDDLLPSGVSDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGLVFGGGTKLTVL | QSVLTQPPSVSEAPRQRVTISCSGSSSNIGNNAVNWYQQLPGKAPKLLIYYDDLLPSGVSDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGLVFGGGTKLTVL | 1 | 295 | null | null | 296 | 331 | CAGTCTGTGCTGACTCAGCCACCCTCGGTGTCTGAAGCCCCCAGGCAGAGGGTCACCATCTCCTGTTCTGGAAGCAGCTCCAACATCGGAAATAATGCTGTAAACTGGTACCAGCAGCTCCCAGGAAAGGCTCCCAAACTCCTCATCTATTATGATGATCTGCTGCCCTCAGGGGTCTCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTC | QSVLTQPPSVSEAPRQRVTISCSGSSSNIGNNAVNWYQQLPGKAPKLLIYYDDLLPSGVSDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNG | CAGTCTGTGCTGACTCAGCCACCCTCGGTGTCTGAAGCCCCCAGGCAGAGGGTCACCATCTCCTGTTCTGGAAGCAGCTCCAACATCGGAAATAATGCTGTAAACTGGTACCAGCAGCTCCCAGGAAAGGCTCCCAAACTCCTCATCTATTATGATGATCTGCTGCCCTCAGGGGTCTCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTC | QSVLTQPPSVSEAPRQRVTISCSGSSSNIGNNAVNWYQQLPGKAPKLLIYYDDLLPSGVSDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNG | null | null | null | null | TGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | CAGTCTGTGCTGACTCAGCCACCCTCGGTGTCTGAAGCCCCCAGGCAGAGGGTCACCATCTCCTGTTCTGGAAGC | QSVLTQPPSVSEAPRQRVTISCSGS | AGCTCCAACATCGGAAATAATGCT | SSNIGNNA | GTAAACTGGTACCAGCAGCTCCCAGGAAAGGCTCCCAAACTCCTCATCTAT | VNWYQQLPGKAPKLLIY | TATGATGAT | YDD | CTGCTGCCCTCAGGGGTCTCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGT | LLPSGVSDRFSGSKSGTSASLAISGLQSEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | GCAGCATGGGATGACAGCCTGAATGGTCTGGTA | AAWDDSLNGLV | TGTGCAGCATGGGATGACAGCCTGAATGGTCTGGTATTC | 39.0 | CAAWDDSLNGLVF | 13.0 | 461.479 | null | 69.904 | 97S295M247S1N | null | 392S2N36M211S | 8.988000000000001e-132 | null | 5.645e-16 | 100.0 | null | 100.0 | 98 | 392 | 1 | 295 | null | null | null | null | 393 | 428 | 3 | 38 | 98 | 172 | 173 | 196 | 197 | 247 | 248 | 256 | 257 | 364 | 398.0 | 427.0 | 365.0 | 397.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'E', '14 ': 'A', '15 ': 'P', '16 ': 'R', '17 ': 'Q', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'N', '37 ': 'N', '38 ': 'A'}, 'fwl2': {'39 ': 'V', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'Y', '57 ': 'D', '65 ': 'D'}, 'fwl3': {'66 ': 'L', '67 ': 'L', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'S', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'A', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'A', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'D', '110 ': 'S', '113 ': 'L', '114 ': 'N', '115 ': 'G', '116 ': 'L', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCCGAGTAAGCACG-1_contig_1 | ACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACATCTGTGGTTCTTCCTTCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGACAGACTACGTCTAGGTTCTTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-59*01 | IGHD4-17*01 | IGHJ5*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGACAGACTACGTCTAGGTTCTTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGANNGACTACGNNNNNNNNNNTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARDRLRLGSWFDPWGQGTLVTVSS | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXLRXXXWFDPWGQGTLVTVSS | 1 | 293 | 296.0 | 302.0 | 313 | 358 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | GACTACG | LR | GACTACG | LR | TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGTAGTTACTAC | GGSISSYY | TGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTAT | WSWIRQPPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGACAGACTACGTCTAGGTTCTTGGTTCGACCCC | ARDRLRLGSWFDP | TGTGCGAGAGACAGACTACGTCTAGGTTCTTGGTTCGACCCCTGG | 45.0 | CARDRLRLGSWFDPW | 15.0 | 458.363 | 14.146 | 89.131 | 92S293M136S | 387S1N7M127S8N | 404S5N46M71S | 6.323000000000001e-131 | 12.85 | 7.471999999999999e-22 | 100.0 | 100.0 | 100.0 | 93 | 385 | 1 | 293 | 388.0 | 394.0 | 2.0 | 8.0 | 405 | 450 | 6 | 51 | 93 | 167 | 168 | 191 | 192 | 242 | 243 | 263 | 264 | 377 | 417.0 | 449.0 | 378.0 | 416.0 | CA | 2 | TCTAGGTTCT | 10.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'R', '109 ': 'L', '110 ': 'R', '111 ': 'L', '112 ': 'G', '113 ': 'S', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCCGAGTAAGCACG-1_contig_2 | GGGGAGTCAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ2*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPYTFGQGTKLEIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPYTFGQGTKLEIK | 1 | 284 | null | null | 285 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | null | null | null | null | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAACAGAGTTACAGTACCCCGTACACT | QQSYSTPYT | TGTCAACAGAGTTACAGTACCCCGTACACTTTT | 33.0 | CQQSYSTPYTF | 11.0 | 444.34 | null | 73.749 | 94S284M174S3N | null | 378S1N38M136S | 1.119e-126 | null | 3.383e-17 | 100.0 | null | 100.0 | 95 | 378 | 1 | 284 | null | null | null | null | 379 | 416 | 2 | 39 | 95 | 172 | 173 | 190 | 191 | 241 | 242 | 250 | 251 | 358 | 386.0 | 415.0 | 359.0 | 385.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'P', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCCGAGTCGGATCC-1_contig_2 | TGGGAGTGACTCCTGTGCCCCACCATGGACACACTTTGCTCCACGCTCCTGCTGCTGACCATCCCTTCATGGGTCTTGTCCCAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACCGAAAACACTCAGCTATGGTCGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV2-5*02 | IGHD5-18*01 | IGHJ4*02 | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACCGAAAACACTCAGCTATGGTCGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAGANNNNNNNCAGCTATGGTNNACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAHRKHSAMVDYFDYWGQGTLVTVSS | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAHRXXXAMVXYFDYWGQGTLVTVSS | 1 | 300 | 308.0 | 317.0 | 320 | 367 | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACCGA | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAHR | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAGA | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAHR | CAGCTATGGT | AMV | CAGCTATGGT | AMV | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCT | QITLKESGPTLVKPTQTLTLTCTFS | GGGTTCTCACTCAGCACTAGTGGAGTGGGT | GFSLSTSGVG | GTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTC | VGWIRQPPGKALEWLAL | ATTTATTGGGATGATGATAAG | IYWDDDK | CGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGT | RYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCACACCGAAAACACTCAGCTATGGTCGACTACTTTGACTAC | AHRKHSAMVDYFDY | TGTGCACACCGAAAACACTCAGCTATGGTCGACTACTTTGACTACTGG | 48.0 | CAHRKHSAMVDYFDYW | 16.0 | 466.153 | 19.914 | 92.976 | 81S300M138S1N | 388S7N10M121S3N | 400S48M71S | 2.844e-133 | 0.2349 | 5.1779999999999995e-23 | 99.667 | 100.0 | 100.0 | 82 | 381 | 1 | 300 | 389.0 | 398.0 | 8.0 | 17.0 | 401 | 448 | 1 | 48 | 82 | 156 | 157 | 186 | 187 | 237 | 238 | 258 | 259 | 372 | 415.0 | 447.0 | 373.0 | 414.0 | AAACACT | 7 | CG | 2.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'I', '3 ': 'T', '4 ': 'L', '5 ': 'K', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'T', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'T', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'T', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'F', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'S', '30 ': 'L', '31 ': 'S', '34 ': 'T', '35 ': 'S', '36 ': 'G', '37 ': 'V', '38 ': 'G'}, 'fwh2': {'39 ': 'V', '40 ': 'G', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'L', '54 ': 'A', '55 ': 'L'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'W', '59 ': 'D', '63 ': 'D', '64 ': 'D', '65 ': 'K'}, 'fwh3': {'66 ': 'R', '67 ': 'Y', '68 ': 'S', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'L', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'K', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'V', '88 ': 'V', '89 ': 'L', '90 ': 'T', '91 ': 'M', '92 ': 'T', '93 ': 'N', '94 ': 'M', '95 ': 'D', '96 ': 'P', '97 ': 'V', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'H', '107 ': 'R', '108 ': 'K', '109 ': 'H', '110 ': 'S', '111 ': 'A', '112A': 'M', '112 ': 'V', '113 ': 'D', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCCGAGTCGGATCC-1_contig_1 | AGTCCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAGATGTGACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-9*01 | null | IGKJ3*01 | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPFTFGPGTKVDIK | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPFTFGPGTKVDIK | 1 | 284 | null | null | 285 | 322 | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCC | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYP | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCC | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYP | null | null | null | null | ATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FTFGPGTKVDIK | ATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FTFGPGTKVDIK | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQLTQSPSFLSASVGDRVTITCRAS | CAGGGCATTAGCAGTTAT | QGISSY | TTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | GCTGCATCC | AAS | ACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGT | TLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYC | TTCGGCCCTGGGACCAAAGTGGATATCAAA | FGPGTKVDIK | CAACAGCTTAATAGTTACCCATTCACT | QQLNSYPFT | TGTCAACAGCTTAATAGTTACCCATTCACTTTC | 33.0 | CQQLNSYPFTF | 11.0 | 444.34 | null | 73.749 | 86S284M174S3N | null | 370S38M136S | 1.102e-126 | null | 3.333e-17 | 100.0 | null | 100.0 | 87 | 370 | 1 | 284 | null | null | null | null | 371 | 408 | 1 | 38 | 87 | 164 | 165 | 182 | 183 | 233 | 234 | 242 | 243 | 350 | 378.0 | 407.0 | 351.0 | 377.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'F', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'L', '108 ': 'N', '109 ': 'S', '114 ': 'Y', '115 ': 'P', '116 ': 'F', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'P', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'D', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCCGATCAGGCCCA-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAATTGGGGGGGCCCATACGATATAGCAGCAGCTGGTACGGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD6-13*01 | IGHJ3*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAATTGGGGGGGCCCATACGATATAGCAGCAGCTGGTACGGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAANNNNNNNNNNNNNNNNNNTATAGCAGCAGCTGGTACNGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCANWGGPYDIAAAGTDAFDIWGQGTMVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAXXXXXXXIAAAGTDAFDIWGQGTMVTVSS | 1 | 293 | 312.0 | 329.0 | 331 | 379 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | TATAGCAGCAGCTGGTAC | IAAAGT | TATAGCAGCAGCTGGTAC | IAAAGT | GATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | GATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGAATTGGGGGGGCCCATACGATATAGCAGCAGCTGGTACGGATGCTTTTGATATC | ANWGGPYDIAAAGTDAFDI | TGTGCGAATTGGGGGGGCCCATACGATATAGCAGCAGCTGGTACGGATGCTTTTGATATCTGG | 63.0 | CANWGGPYDIAAAGTDAFDIW | 21.0 | 458.363 | 35.296 | 94.899 | 136S293M157S3N | 447S3N18M121S | 466S1N49M71S | 7.117000000000005e-131 | 6.227e-06 | 1.5459999999999998e-23 | 100.0 | 100.0 | 100.0 | 137 | 429 | 1 | 293 | 448.0 | 465.0 | 4.0 | 21.0 | 467 | 515 | 2 | 50 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 482.0 | 514.0 | 425.0 | 481.0 | TTGGGGGGGCCCATACGA | 18 | G | 1.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'N', '107 ': 'W', '108 ': 'G', '109 ': 'G', '110 ': 'P', '111 ': 'Y', '111A': 'D', '111B': 'I', '111C': 'A', '112C': 'A', '112B': 'A', '112A': 'G', '112 ': 'T', '113 ': 'D', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCCGATCAGGCCCA-1_contig_1 | ATGAGCAAAACTGACAAGTCAAGGCAGGAAGATGTTGCCATCACAACTCATTGGGTTTCTGCTGCTCTGGGTTCCAGCCTCCAGGGGTGAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATTGGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCTTCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAACGTATTACTGTCATCAGAGTAGTAGTTTACCTCTCACCTTCGGCCAAGGGACACGACTGGAGATTAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV6-21*01 | null | IGKJ5*01 | GAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATTGGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCTTCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAACGTATTACTGTCATCAGAGTAGTAGTTTACCTCTCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | GAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATTGGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCTTCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAACGTATTACTGTCATCAGAGTAGTAGTTTACCTCTCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | EIVLTQSPDFQSVTPKEKVTITCRASQSIGSSLHWYQQKPDQSPKLLIKYASQSFSGVPSRFSGSGSGTDFTLTINSLEAEDAATYYCHQSSSLPLTFGQGTRLEIK | EIVLTQSPDFQSVTPKEKVTITCRASQSIGSSLHWYQQKPDQSPKLLIKYASQSFSGVPSRFSGSGSGTDFTLTINSLEAEDAATYYCHQSSSLPLTFGQGTRLEIK | 1 | 286 | null | null | 287 | 322 | GAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATTGGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCTTCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAACGTATTACTGTCATCAGAGTAGTAGTTTACCTC | EIVLTQSPDFQSVTPKEKVTITCRASQSIGSSLHWYQQKPDQSPKLLIKYASQSFSGVPSRFSGSGSGTDFTLTINSLEAEDAATYYCHQSSSLP | GAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATTGGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCTTCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAACGTATTACTGTCATCAGAGTAGTAGTTTACCTC | EIVLTQSPDFQSVTPKEKVTITCRASQSIGSSLHWYQQKPDQSPKLLIKYASQSFSGVPSRFSGSGSGTDFTLTINSLEAEDAATYYCHQSSSLP | null | null | null | null | TCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | TFGQGTRLEIK | TCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | TFGQGTRLEIK | GAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGT | EIVLTQSPDFQSVTPKEKVTITCRAS | CAGAGCATTGGTAGTAGC | QSIGSS | TTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAG | LHWYQQKPDQSPKLLIK | TATGCTTCC | YAS | CAGTCCTTCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGCAACGTATTACTGT | QSFSGVPSRFSGSGSGTDFTLTINSLEAEDAATYYC | TTCGGCCAAGGGACACGACTGGAGATTAAA | FGQGTRLEIK | CATCAGAGTAGTAGTTTACCTCTCACC | HQSSSLPLT | TGTCATCAGAGTAGTAGTTTACCTCTCACCTTC | 33.0 | CHQSSSLPLTF | 11.0 | 447.456 | null | 69.904 | 88S286M172S1N | null | 374S2N36M136S | 1.2749999999999998e-127 | null | 4.809e-16 | 100.0 | null | 100.0 | 89 | 374 | 1 | 286 | null | null | null | null | 375 | 410 | 3 | 38 | 89 | 166 | 167 | 184 | 185 | 235 | 236 | 244 | 245 | 352 | 380.0 | 409.0 | 353.0 | 379.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'D', '10 ': 'F', '11 ': 'Q', '12 ': 'S', '13 ': 'V', '14 ': 'T', '15 ': 'P', '16 ': 'K', '17 ': 'E', '18 ': 'K', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'G', '37 ': 'S', '38 ': 'S'}, 'fwk2': {'39 ': 'L', '40 ': 'H', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'D', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'K'}, 'cdrk2': {'56 ': 'Y', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'Q', '67 ': 'S', '68 ': 'F', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'A', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'H', '106 ': 'Q', '107 ': 'S', '108 ': 'S', '109 ': 'S', '114 ': 'L', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'R', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGCCGATCGCCAGCA-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAACTGGGATGGTTCGACGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD3-10*01 | IGHJ4*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAACTGGGATGGTTCGACGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAANNNNNATGGTTCGNNGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKLGWFDDYWGQGTLVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXWFXDYWGQGTLVTVSS | 1 | 294 | 300.0 | 307.0 | 310 | 349 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | ATGGTTCG | WF | ATGGTTCG | WF | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAAACTGGGATGGTTCGACGACTAC | AKLGWFDDY | TGTGCGAAACTGGGATGGTTCGACGACTACTGG | 33.0 | CAKLGWFDDYW | 11.0 | 459.921 | 16.069 | 77.595 | 136S294M126S2N | 435S8N8M113S15N | 445S8N40M71S | 2.3e-131 | 3.622 | 2.371e-18 | 100.0 | 100.0 | 100.0 | 137 | 430 | 1 | 294 | 436.0 | 443.0 | 9.0 | 16.0 | 446 | 485 | 9 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 452.0 | 484.0 | 425.0 | 451.0 | CTGGG | 5 | AC | 2.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'L', '108 ': 'G', '109 ': 'W', '114 ': 'F', '115 ': 'D', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGCCGATCGCCAGCA-1_contig_1 | TGGGGAGGAATCAGTCCCACTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTGCCAGGTGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACGGGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-17*01 | null | IGKJ1*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACGGGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACNNGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKRLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQHNSYGWTFGQGTKVEIK | DIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKRLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQHNSYXWTFGQGTKVEIK | 1 | 282 | null | null | 285 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTAC | DIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKRLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQHNSY | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTAC | DIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKRLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQHNSY | null | null | null | null | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGGGCATTAGAAATGAT | QGIRND | TTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTAT | LGWYQQKPGKAPKRLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGT | SLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CTACAGCATAATAGTTACGGGTGGACG | LQHNSYGWT | TGTCTACAGCATAATAGTTACGGGTGGACGTTC | 33.0 | CLQHNSYGWTF | 11.0 | 441.224 | null | 73.749 | 98S282M176S5N | null | 382S38M136S | 9.775e-126 | null | 3.408e-17 | 100.0 | null | 100.0 | 99 | 380 | 1 | 282 | null | null | null | null | 383 | 420 | 1 | 38 | 99 | 176 | 177 | 194 | 195 | 245 | 246 | 254 | 255 | 362 | 390.0 | 419.0 | 363.0 | 389.0 | GG | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'R', '37 ': 'N', '38 ': 'D'}, 'fwk2': {'39 ': 'L', '40 ': 'G', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'R', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'L', '106 ': 'Q', '107 ': 'H', '108 ': 'N', '109 ': 'S', '114 ': 'Y', '115 ': 'G', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGGAGAAGACCCACC-1_contig_1 | AGCTCTGGGAGAGGAGCCCCAGCCTTGGGATTCCCAAGTGTTTTCATTCAGTGATCAGGACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGATTTTCCTTGCTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGATACCGACTGGGGATATTTTGACTGGGGTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-15*01 | IGHD3-9*01 | IGHJ3*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGATACCGACTGGGGATATTTTGACTGGGGTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGANNNNNNNNNNNGATATTTTGACTGGNNTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTDTDWGYFDWGDAFDIWGQGTMVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTXXXXXYFDWXDAFDIWGQGTMVTVSS | 1 | 302 | 314.0 | 327.0 | 330 | 379 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | GATATTTTGACTGG | YFDW | GATATTTTGACTGG | YFDW | TGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | TGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACTTTCAGTAACGCCTGG | GFTFSNAW | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGT | MSWVRQAPGKGLEWVGR | ATTAAAAGCAAAACTGATGGTGGGACAACA | IKSKTDGGTT | GACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGT | DYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | ACCACAGATACCGACTGGGGATATTTTGACTGGGGTGATGCTTTTGATATC | TTDTDWGYFDWGDAFDI | TGTACCACAGATACCGACTGGGGATATTTTGACTGGGGTGATGCTTTTGATATCTGG | 57.0 | CTTDTDWGYFDWGDAFDIW | 19.0 | 472.386 | 27.605 | 96.822 | 137S302M148S | 450S7N14M123S10N | 466S50M71S | 4.283e-135 | 0.001289 | 4.084e-24 | 100.0 | 100.0 | 100.0 | 138 | 439 | 1 | 302 | 451.0 | 464.0 | 8.0 | 21.0 | 467 | 516 | 1 | 50 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 317 | 318 | 431 | 483.0 | 515.0 | 432.0 | 482.0 | TACCGACTGGG | 11 | GG | 2.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'N', '37 ': 'A', '38 ': 'W'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'K', '58 ': 'S', '59 ': 'K', '60 ': 'T', '61 ': 'D', '62 ': 'G', '63 ': 'G', '64 ': 'T', '65 ': 'T'}, 'fwh3': {'66 ': 'D', '67 ': 'Y', '68 ': 'A', '69 ': 'A', '70 ': 'P', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'D', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'T', '106 ': 'T', '107 ': 'D', '108 ': 'T', '109 ': 'D', '110 ': 'W', '111 ': 'G', '111A': 'Y', '111B': 'F', '112B': 'D', '112A': 'W', '112 ': 'G', '113 ': 'D', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGGAGAAGACCCACC-1_contig_2 | GATCAGGACTCCTCAGTTCACCTTCTCACAATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCCCAGGATCCAGTGGGGATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCTCCGGGAACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV2-30*01 | null | IGKJ1*01 | GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCTCCGGGAACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCTCCNNNNACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DVVMTQSPLSLPVTLGQPASISCRSSQSLVYSDGNTYLNWFQQRPGQSPRRLIYKVSNRDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGTHWPPGTFGQGTKVEIK | DVVMTQSPLSLPVTLGQPASISCRSSQSLVYSDGNTYLNWFQQRPGQSPRRLIYKVSNRDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGTHWPPXTFGQGTKVEIK | 1 | 302 | null | null | 307 | 340 | GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCTCC | DVVMTQSPLSLPVTLGQPASISCRSSQSLVYSDGNTYLNWFQQRPGQSPRRLIYKVSNRDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGTHWPP | GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCTCC | DVVMTQSPLSLPVTLGQPASISCRSSQSLVYSDGNTYLNWFQQRPGQSPRRLIYKVSNRDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGTHWPP | null | null | null | null | ACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | ACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGT | DVVMTQSPLSLPVTLGQPASISCRSS | CAAAGCCTCGTATACAGTGATGGAAACACCTAC | QSLVYSDGNTY | TTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTAT | LNWFQQRPGQSPRRLIY | AAGGTTTCT | KVS | AACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGC | NRDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | ATGCAAGGTACACACTGGCCTCCGGGAACG | MQGTHWPPGT | TGCATGCAAGGTACACACTGGCCTCCGGGAACGTTC | 36.0 | CMQGTHWPPGTF | 12.0 | 472.386 | null | 66.059 | 90S302M174S | null | 396S4N34M136S | 4.145e-135 | null | 7.171e-15 | 100.0 | null | 100.0 | 91 | 392 | 1 | 302 | null | null | null | null | 397 | 430 | 5 | 38 | 91 | 168 | 169 | 201 | 202 | 252 | 253 | 261 | 262 | 369 | 400.0 | 429.0 | 370.0 | 399.0 | GGGA | 4 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'V', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'L', '10 ': 'S', '11 ': 'L', '12 ': 'P', '13 ': 'V', '14 ': 'T', '15 ': 'L', '16 ': 'G', '17 ': 'Q', '18 ': 'P', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'L', '30 ': 'V', '31 ': 'Y', '32 ': 'S', '34 ': 'D', '35 ': 'G', '36 ': 'N', '37 ': 'T', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'F', '43 ': 'Q', '44 ': 'Q', '45 ': 'R', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'R', '52 ': 'R', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'K', '57 ': 'V', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'D', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'K', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'G', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'M', '106 ': 'Q', '107 ': 'G', '108 ': 'T', '109 ': 'H', '113 ': 'W', '114 ': 'P', '115 ': 'P', '116 ': 'G', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGGAGAAGAGTCTGG-1_contig_2 | AGCTCTGGGAGAGGAGCCCCAGCCGTGAGATTCCCAGGAGTTTCCACTTGGTGATCAGCACTGAACACAGACCACCAACCATGGAGTTTGGGCTTAGCTGGGTTTTCCTTGTTGCTATTTTAAAAGGTGTCCAATGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGTTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAGAGCATTTGACTGGACCTATCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-49*05 | IGHD3-9*01 | IGHJ6*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGTTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAGAGCATTTGACTGGACCTATCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGTTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAGANNNTTTGACTGGNNNNNNCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLVESGGGLVKPGRSLRLSCTASGFTFGDYAMSWFRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTREHLTGPIYYYYGMDVWGQGTTVTVSS | EVQLVESGGGLVKPGRSLRLSCTASGFTFGDYAMSWFRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTRXXLTGXXYYYYGMDVWGQGTTVTVSS | 1 | 302 | 306.0 | 314.0 | 321 | 378 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGTTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAGA | EVQLVESGGGLVKPGRSLRLSCTASGFTFGDYAMSWFRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGTTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAGA | EVQLVESGGGLVKPGRSLRLSCTASGFTFGDYAMSWFRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTR | TTTGACTGG | LTG | TTTGACTGG | LTG | CTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCT | EVQLVESGGGLVKPGRSLRLSCTAS | GGATTCACCTTTGGTGATTATGCT | GFTFGDYA | ATGAGCTGGTTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTC | MSWFRQAPGKGLEWVGF | ATTAGAAGCAAAGCTTATGGTGGGACAACA | IRSKAYGGTT | GAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGT | EYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | ACTAGAGAGCATTTGACTGGACCTATCTACTACTACTACGGTATGGACGTC | TREHLTGPIYYYYGMDV | TGTACTAGAGAGCATTTGACTGGACCTATCTACTACTACTACGGTATGGACGTCTGG | 57.0 | CTREHLTGPIYYYYGMDVW | 19.0 | 472.386 | 17.992 | 112.203 | 137S302M148S | 442S12N9M136S10N | 457S4N58M72S | 4.283e-135 | 1.01 | 9.568e-29 | 100.0 | 100.0 | 100.0 | 138 | 439 | 1 | 302 | 443.0 | 451.0 | 13.0 | 21.0 | 458 | 515 | 5 | 62 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 317 | 318 | 431 | 483.0 | 515.0 | 432.0 | 482.0 | GCA | 3 | ACCTAT | 6.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'G', '36 ': 'D', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'F', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'G', '55 ': 'F'}, 'cdrh2': {'56 ': 'I', '57 ': 'R', '58 ': 'S', '59 ': 'K', '60 ': 'A', '61 ': 'Y', '62 ': 'G', '63 ': 'G', '64 ': 'T', '65 ': 'T'}, 'fwh3': {'66 ': 'E', '67 ': 'Y', '68 ': 'A', '69 ': 'A', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'D', '83 ': 'S', '84 ': 'K', '85 ': 'S', '86 ': 'I', '87 ': 'A', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'T', '106 ': 'R', '107 ': 'E', '108 ': 'H', '109 ': 'L', '110 ': 'T', '111 ': 'G', '111A': 'P', '111B': 'I', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGGAGAAGAGTCTGG-1_contig_1 | CTGGGGGATCAGGACTCCTCAGTTCACCTTCTCACAATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCTCTGGATCCAGTGGGGATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCTCCCTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV2-28*01 | null | IGKJ1*01 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCTCCCTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCTCCNTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPPWTFGQGTKVEIK | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPPWTFGQGTKVEIK | 1 | 302 | null | null | 304 | 340 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCTCC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPP | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCTCC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPP | null | null | null | null | TGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | TGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGT | DIVMTQSPLSLPVTPGEPASISCRSS | CAGAGCCTCCTGCATAGTAATGGATACAACTAT | QSLLHSNGYNY | TTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTAT | LDWYLQKPGQSPQLLIY | TTGGGTTCT | LGS | AATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGC | NRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | ATGCAAGCTCTACAAACTCCTCCCTGGACG | MQALQTPPWT | TGCATGCAAGCTCTACAAACTCCTCCCTGGACGTTC | 36.0 | CMQALQTPPWTF | 12.0 | 472.386 | null | 71.827 | 96S302M174S | null | 399S1N37M136S | 4.191e-135 | null | 1.33e-16 | 100.0 | null | 100.0 | 97 | 398 | 1 | 302 | null | null | null | null | 400 | 436 | 2 | 38 | 97 | 174 | 175 | 207 | 208 | 258 | 259 | 267 | 268 | 375 | 406.0 | 435.0 | 376.0 | 405.0 | C | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'L', '10 ': 'S', '11 ': 'L', '12 ': 'P', '13 ': 'V', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'P', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'L', '30 ': 'L', '31 ': 'H', '32 ': 'S', '34 ': 'N', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'D', '41 ': 'W', '42 ': 'Y', '43 ': 'L', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'Q', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'L', '57 ': 'G', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'K', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'G', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'M', '106 ': 'Q', '107 ': 'A', '108 ': 'L', '109 ': 'Q', '113 ': 'T', '114 ': 'P', '115 ': 'P', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGGAGAAGTATCTCG-1_contig_1 | AGCTCTGAGAGAGGAGCCTTAGCCCTGGATTCCAAGGCCTATCCACTTGGTGATCAGCACTGAGCACCGAGGATTCACCATGGAACTGGGGCTCCGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGGGGGAGGGGGGGGTAGTAGTACCAGCTGCTCCACAACCATACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGCACCCACCAAGGCTCCGGATGTGTTCCCCATCATATCAGGGTGCAGACACCCAAAGGATAACAGCCCTGTGGTCCTGGCATGCTTGATAACTGGGTACCACC | H | F | T | F | T | F | T | IGHV3-21*01 | IGHD2-2*01 | IGHJ6*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGGGGGAGGGGGGGGTAGTAGTACCAGCTGCTCCACAACCATACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGANNNNNNNNNNNNNGTAGTAGTACCAGCTGCTNNNNNNNNNTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAREGEGGVVVPAAPQPYYYYGMDVWGQGTTVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARXXXXXVVVPAAXXXYYYYGMDVWGQGTTVTVSS | 1 | 296 | 310.0 | 327.0 | 337 | 393 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GTAGTAGTACCAGCTGCT | VVVPAA | GTAGTAGTACCAGCTGCT | VVVPAA | TACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | TACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACCTTCAGTAGCTATAGC | GFTFSSYS | ATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCC | MNWVRQAPGKGLEWVSS | ATTAGTAGTAGTAGTAGTTACATA | ISSSSSYI | TACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGAGGGGGAGGGGGGGGTAGTAGTACCAGCTGCTCCACAACCATACTACTACTACGGTATGGACGTC | AREGEGGVVVPAAPQPYYYYGMDV | TGTGCGAGAGAGGGGGAGGGGGGGGTAGTAGTACCAGCTGCTCCACAACCATACTACTACTACGGTATGGACGTCTGG | 78.0 | CAREGEGGVVVPAAPQPYYYYGMDVW | 26.0 | 463.037 | 35.296 | 110.281 | 136S296M200S | 445S8N18M169S5N | 472S5N57M103S | 3.0170000000000003e-132 | 6.725e-06 | 3.911e-28 | 100.0 | 100.0 | 100.0 | 137 | 432 | 1 | 296 | 446.0 | 463.0 | 9.0 | 26.0 | 473 | 529 | 6 | 62 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 497.0 | 529.0 | 425.0 | 496.0 | GGGGGAGGGGGGG | 13 | CCACAACCA | 9.0 | GCACCCACCAAGGCTCCGGATGTGTTCCCCATCATATCAGGGTGCAGACACCCAAAGGATAACAGCCCTGTGGTCCTGGCATGCTTGATAACTGGGTACCACC | IGHD | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'S'}, 'fwh2': {'39 ': 'M', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'S', '59 ': 'S', '62 ': 'S', '63 ': 'S', '64 ': 'Y', '65 ': 'I'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'E', '108 ': 'G', '109 ': 'E', '110 ': 'G', '111 ': 'G', '111A': 'V', '111B': 'V', '111C': 'V', '111D': 'P', '111E': 'A', '112F': 'A', '112E': 'P', '112D': 'Q', '112C': 'P', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGGAGAAGTATCTCG-1_contig_2 | GATCAGGACTCCTCAGTTCACCTTCTCACAATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCTCTGGATCCAGTGGGGATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACCCTGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV2-28*01 | null | IGKJ2*01 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACCCTGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACNNTGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTLYTFGQGTKLEIK | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTXYTFGQGTKLEIK | 1 | 296 | null | null | 299 | 337 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAAC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQT | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAAC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQT | null | null | null | null | TGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | TGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGT | DIVMTQSPLSLPVTPGEPASISCRSS | CAGAGCCTCCTGCATAGTAATGGATACAACTAT | QSLLHSNGYNY | TTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTAT | LDWYLQKPGQSPQLLIY | TTGGGTTCT | LGS | AATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGC | NRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | ATGCAAGCTCTACAAACCCTGTACACT | MQALQTLYT | TGCATGCAAGCTCTACAAACCCTGTACACTTTT | 33.0 | CMQALQTLYTF | 11.0 | 463.037 | null | 75.672 | 90S296M177S6N | null | 388S39M136S | 2.687e-132 | null | 9.105e-18 | 100.0 | null | 100.0 | 91 | 386 | 1 | 296 | null | null | null | null | 389 | 427 | 1 | 39 | 91 | 168 | 169 | 201 | 202 | 252 | 253 | 261 | 262 | 369 | 397.0 | 426.0 | 370.0 | 396.0 | CC | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'L', '10 ': 'S', '11 ': 'L', '12 ': 'P', '13 ': 'V', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'P', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'L', '30 ': 'L', '31 ': 'H', '32 ': 'S', '34 ': 'N', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'D', '41 ': 'W', '42 ': 'Y', '43 ': 'L', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'Q', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'L', '57 ': 'G', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'K', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'G', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'M', '106 ': 'Q', '107 ': 'A', '108 ': 'L', '109 ': 'Q', '114 ': 'T', '115 ': 'L', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGGAGAAGTCTCCTC-1_contig_2 | TGGGGACCCAAAAACCACACCCCTCCTTGGGAGAATCCCCTAGATCACAGCTCCTCACCATGGACTGGACCTGGAGCATCCTTTTCTTGGTGGCAGCAGCAACAGGTGCCCACTCCCAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGAGTGGGAGCTAGTCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-18*01 | IGHD1-26*01 | IGHJ4*02 | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGAGTGGGAGCTAGTCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGAGTGGGAGCTANNCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAREWELVYWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAREWELXYWGQGTLVTVSS | 1 | 296 | 297.0 | 306.0 | 309 | 346 | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAR | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAR | GTGGGAGCTA | WEL | GTGGGAGCTA | WEL | CTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YWGQGTLVTVSS | CTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YWGQGTLVTVSS | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGTTACACCTTTACCAGCTATGGT | GYTFTSYG | ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGG | ISWVRQAPGQGLEWMGW | ATCAGCGCTTACAATGGTAACACA | ISAYNGNT | AACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGAGTGGGAGCTAGTCTAC | AREWELVY | TGTGCGAGAGAGTGGGAGCTAGTCTACTGG | 30.0 | CAREWELVYW | 10.0 | 463.037 | 19.914 | 73.749 | 116S296M121S | 412S6N10M111S4N | 424S10N38M71S | 2.5370000000000002e-132 | 0.2414 | 3.264e-17 | 100.0 | 100.0 | 100.0 | 117 | 412 | 1 | 296 | 413.0 | 422.0 | 7.0 | 16.0 | 425 | 462 | 11 | 48 | 117 | 191 | 192 | 215 | 216 | 266 | 267 | 290 | 291 | 404 | 429.0 | 461.0 | 405.0 | 428.0 | null | 0 | GT | 2.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'I', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'A', '59 ': 'Y', '62 ': 'N', '63 ': 'G', '64 ': 'N', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'L', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'T', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'R', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'E', '108 ': 'W', '114 ': 'E', '115 ': 'L', '116 ': 'V', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGGAGAAGTCTCCTC-1_contig_1 | GGGAGAGCCCTGGGGAGGAACTGCTCAGTTAGGACCCAGAGGGAACCATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCCGTCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-11*01 | null | IGKJ4*01 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCCGTCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCCNNNGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPPSLTFGGGTKVEIK | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPPXLTFGGGTKVEIK | 1 | 287 | null | null | 291 | 328 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPP | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPP | null | null | null | null | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPATLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCTAC | QSVSSY | TTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GATGCATCC | DAS | AACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGT | NRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAGCAGCGTAGCAACTGGCCTCCGTCGCTCACT | QQRSNWPPSLT | TGTCAGCAGCGTAGCAACTGGCCTCCGTCGCTCACTTTC | 39.0 | CQQRSNWPPSLTF | 13.0 | 449.014 | null | 73.749 | 107S287M177S | null | 397S38M136S | 4.5410000000000003e-128 | null | 3.502e-17 | 100.0 | null | 100.0 | 108 | 394 | 1 | 287 | null | null | null | null | 398 | 435 | 1 | 38 | 108 | 185 | 186 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 405.0 | 434.0 | 372.0 | 404.0 | GTC | 3 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'R', '108 ': 'S', '109 ': 'N', '110 ': 'W', '113 ': 'P', '114 ': 'P', '115 ': 'S', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGGAGACAAATACAG-1_contig_2 | AGCTCTGGGAGAGGAGCCCCAGCCTTGGGATTCCCAAGTGTTTTCATTCAGTGATCAGGACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGATTTTCCTTGCTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGAAGGGGATATTGTAGTGGGGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-15*01 | IGHD2-15*01 | IGHJ6*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGAAGGGGATATTGTAGTGGGGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGANNNGGATATTGTAGTGGNNTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTEGDIVVGYGMDVWGQGTTVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTXXDIVVXYGMDVWGQGTTVTVSS | 1 | 302 | 306.0 | 319.0 | 322 | 369 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | GGATATTGTAGTGG | DIVV | GGATATTGTAGTGG | DIVV | TACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YGMDVWGQGTTVTVSS | TACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YGMDVWGQGTTVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACTTTCAGTAACGCCTGG | GFTFSNAW | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGT | MSWVRQAPGKGLEWVGR | ATTAAAAGCAAAACTGATGGTGGGACAACA | IKSKTDGGTT | GACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGT | DYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | ACCACAGAAGGGGATATTGTAGTGGGGTACGGTATGGACGTC | TTEGDIVVGYGMDV | TGTACCACAGAAGGGGATATTGTAGTGGGGTACGGTATGGACGTCTGG | 48.0 | CTTEGDIVVGYGMDVW | 16.0 | 472.386 | 27.605 | 92.976 | 137S302M139S | 442S1N14M122S16N | 458S14N48M72S | 4.214e-135 | 0.001269 | 5.779e-23 | 100.0 | 100.0 | 100.0 | 138 | 439 | 1 | 302 | 443.0 | 456.0 | 2.0 | 15.0 | 459 | 506 | 15 | 62 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 317 | 318 | 431 | 474.0 | 506.0 | 432.0 | 473.0 | AGG | 3 | GG | 2.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'N', '37 ': 'A', '38 ': 'W'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'K', '58 ': 'S', '59 ': 'K', '60 ': 'T', '61 ': 'D', '62 ': 'G', '63 ': 'G', '64 ': 'T', '65 ': 'T'}, 'fwh3': {'66 ': 'D', '67 ': 'Y', '68 ': 'A', '69 ': 'A', '70 ': 'P', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'D', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'T', '106 ': 'T', '107 ': 'E', '108 ': 'G', '109 ': 'D', '110 ': 'I', '111 ': 'V', '112A': 'V', '112 ': 'G', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGGAGACAAATACAG-1_contig_1 | CTGGGCCTCAGGAAGCAGCATCGGAGGTGCCTCAGCCATGGCATGGATCCCTCTCTTCCTCGGCGTCCTTGCTTACTGCACAGGTTCCGTGGCCTCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCTTTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-1*01 | null | IGLJ2*01 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCTTTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCNNTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSFVVFGGGTKLTVL | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSXVVFGGGTKLTVL | 1 | 279 | null | null | 282 | 319 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGC | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSS | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGC | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSS | null | null | null | null | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTASITCSGD | AAATTGGGGGATAAATAT | KLGDKY | GCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTAT | ACWYQQKPGQSPVLVIY | CAAGATAGC | QDS | AAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGT | KRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGGCGTGGGACAGCAGCTTTGTGGTA | QAWDSSFVV | TGTCAGGCGTGGGACAGCAGCTTTGTGGTATTC | 33.0 | CQAWDSSFVVF | 11.0 | 436.549 | null | 73.749 | 94S279M251S6N | null | 375S38M211S | 2.802e-124 | null | 3.834e-17 | 100.0 | null | 100.0 | 95 | 373 | 1 | 279 | null | null | null | null | 376 | 413 | 1 | 38 | 95 | 169 | 170 | 187 | 188 | 238 | 239 | 247 | 248 | 355 | 383.0 | 412.0 | 356.0 | 382.0 | TT | 2 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'K', '28 ': 'L', '29 ': 'G', '36 ': 'D', '37 ': 'K', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'C', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'Q', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'T', '95 ': 'Q', '96 ': 'A', '97 ': 'M', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'S', '114 ': 'S', '115 ': 'F', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGGAGACAAGTCATC-1_contig_2 | TGGGGACCCAAAAACCACACCCCTCCTTGGGAGAATCCCCTAGATCACAGCTCCTCACCATGGACTGGACCTGGAGCATCCTTTTCTTGGTGGCAGCAGCAACAGGTGCCCACTCCCAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGACTATTACTATGGTTCGGGGAGCTATAGTTCCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-18*01 | IGHD3-10*01 | IGHJ5*02 | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGACTATTACTATGGTTCGGGGAGCTATAGTTCCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGANTATTACTATGGTTCGGGGAGTTATNNNNNCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDYYYGSGSYSSWFDPWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARXYYYGSGSYXXWFDPWGQGTLVTVSS | 1 | 296 | 298.0 | 321.0 | 327 | 373 | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAR | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAR | TATTACTATGGTTCGGGGAGCTAT | YYYGSGSY | TATTACTATGGTTCGGGGAGTTAT | YYYGSGSY | CTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | CTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGTTACACCTTTACCAGCTATGGT | GYTFTSYG | ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGG | ISWVRQAPGQGLEWMGW | ATCAGCGCTTACAATGGTAACACA | ISAYNGNT | AACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGACTATTACTATGGTTCGGGGAGCTATAGTTCCTGGTTCGACCCC | ARDYYYGSGSYSSWFDP | TGTGCGAGAGACTATTACTATGGTTCGGGGAGCTATAGTTCCTGGTTCGACCCCTGG | 57.0 | CARDYYYGSGSYSSWFDPW | 19.0 | 463.037 | 41.064 | 91.054 | 116S296M148S | 413S1N24M123S6N | 442S4N47M71S | 2.6720000000000003e-132 | 1.091e-07 | 2.1209999999999998e-22 | 100.0 | 95.833 | 100.0 | 117 | 412 | 1 | 296 | 414.0 | 437.0 | 2.0 | 25.0 | 443 | 489 | 5 | 51 | 117 | 191 | 192 | 215 | 216 | 266 | 267 | 290 | 291 | 404 | 456.0 | 488.0 | 405.0 | 455.0 | C | 1 | AGTTC | 5.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'I', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'A', '59 ': 'Y', '62 ': 'N', '63 ': 'G', '64 ': 'N', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'L', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'T', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'R', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'Y', '109 ': 'Y', '110 ': 'Y', '111 ': 'G', '111A': 'S', '111B': 'G', '112B': 'S', '112A': 'Y', '112 ': 'S', '113 ': 'S', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGGAGACAAGTCATC-1_contig_1 | AGCCTGGGCCTCAGGAAGCAGCATCGGGGGTGCCGCAGCCATGGCCTGGACCGCTCTCCTTCTGAGCCTCCTTGCTCACTTTACAGGTTCTGTGGCCTCCTATGAGCTGACTCAGCCACTCTCAGTGTCAGTGGCCCTGGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAATGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCATCTATAGGGATAGCAACCGGCCCTCTGGGATCCCTGAGCGATTCTCTGGCTCCAACTCGGGGAACACGGCCACCCTGACCATCAGCAGAGCCCAAGCCGGGGATGAGGCTGACTATTACTGTCAGGTGTGGGACAGCAGCACTGCATGGGATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-9*01 | null | IGLJ2*01 | TCCTATGAGCTGACTCAGCCACTCTCAGTGTCAGTGGCCCTGGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAATGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCATCTATAGGGATAGCAACCGGCCCTCTGGGATCCCTGAGCGATTCTCTGGCTCCAACTCGGGGAACACGGCCACCCTGACCATCAGCAGAGCCCAAGCCGGGGATGAGGCTGACTATTACTGTCAGGTGTGGGACAGCAGCACTGCATGGGATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACTCAGCCACTCTCAGTGTCAGTGGCCCTGGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAATGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCATCTATAGGGATAGCAACCGGCCCTCTGGGATCCCTGAGCGATTCTCTGGCTCCAACTCGGGGAACACGGCCACCCTGACCATCAGCAGAGCCCAAGCCGGGGATGAGGCTGACTATTACTGTCAGGTGTGGGACAGCAGCACTGCANNNNNTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPLSVSVALGQTARITCGGNNIGSKNVHWYQQKPGQAPVLVIYRDSNRPSGIPERFSGSNSGNTATLTISRAQAGDEADYYCQVWDSSTAWDVVFGGGTKLTVL | SYELTQPLSVSVALGQTARITCGGNNIGSKNVHWYQQKPGQAPVLVIYRDSNRPSGIPERFSGSNSGNTATLTISRAQAGDEADYYCQVWDSSTAXXVVFGGGTKLTVL | 1 | 285 | null | null | 291 | 328 | TCCTATGAGCTGACTCAGCCACTCTCAGTGTCAGTGGCCCTGGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAATGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCATCTATAGGGATAGCAACCGGCCCTCTGGGATCCCTGAGCGATTCTCTGGCTCCAACTCGGGGAACACGGCCACCCTGACCATCAGCAGAGCCCAAGCCGGGGATGAGGCTGACTATTACTGTCAGGTGTGGGACAGCAGCACTGCA | SYELTQPLSVSVALGQTARITCGGNNIGSKNVHWYQQKPGQAPVLVIYRDSNRPSGIPERFSGSNSGNTATLTISRAQAGDEADYYCQVWDSSTA | TCCTATGAGCTGACTCAGCCACTCTCAGTGTCAGTGGCCCTGGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAATGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCATCTATAGGGATAGCAACCGGCCCTCTGGGATCCCTGAGCGATTCTCTGGCTCCAACTCGGGGAACACGGCCACCCTGACCATCAGCAGAGCCCAAGCCGGGGATGAGGCTGACTATTACTGTCAGGTGTGGGACAGCAGCACTGCA | SYELTQPLSVSVALGQTARITCGGNNIGSKNVHWYQQKPGQAPVLVIYRDSNRPSGIPERFSGSNSGNTATLTISRAQAGDEADYYCQVWDSSTA | null | null | null | null | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TCCTATGAGCTGACTCAGCCACTCTCAGTGTCAGTGGCCCTGGGACAGACGGCCAGGATTACCTGTGGGGGAAAC | SYELTQPLSVSVALGQTARITCGGN | AACATTGGAAGTAAAAAT | NIGSKN | GTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCATCTAT | VHWYQQKPGQAPVLVIY | AGGGATAGC | RDS | AACCGGCCCTCTGGGATCCCTGAGCGATTCTCTGGCTCCAACTCGGGGAACACGGCCACCCTGACCATCAGCAGAGCCCAAGCCGGGGATGAGGCTGACTATTACTGT | NRPSGIPERFSGSNSGNTATLTISRAQAGDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGGTGTGGGACAGCAGCACTGCATGGGATGTGGTA | QVWDSSTAWDVV | TGTCAGGTGTGGGACAGCAGCACTGCATGGGATGTGGTATTC | 42.0 | CQVWDSSTAWDVVF | 14.0 | 445.898 | null | 73.749 | 97S285M254S | null | 387S38M211S | 4.385e-127 | null | 3.909e-17 | 100.0 | null | 100.0 | 98 | 382 | 1 | 285 | null | null | null | null | 388 | 425 | 1 | 38 | 98 | 172 | 173 | 190 | 191 | 241 | 242 | 250 | 251 | 358 | 395.0 | 424.0 | 359.0 | 394.0 | TGGGA | 5 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'L', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'A', '15 ': 'L', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'G', '25 ': 'G', '26 ': 'N'}, 'cdrl1': {'27 ': 'N', '28 ': 'I', '29 ': 'G', '36 ': 'S', '37 ': 'K', '38 ': 'N'}, 'fwl2': {'39 ': 'V', '40 ': 'H', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'R', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'N', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'A', '95 ': 'Q', '96 ': 'A', '97 ': 'G', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'V', '107 ': 'W', '108 ': 'D', '109 ': 'S', '110 ': 'S', '112 ': 'T', '113 ': 'A', '114 ': 'W', '115 ': 'D', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGGAGACACCGGAAA-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGCGCGGGAAGGGGGGTATAGCAGCAGCTGGTATGGGCTGGGGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD6-13*01 | IGHJ4*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGCGCGGGAAGGGGGGTATAGCAGCAGCTGGTATGGGCTGGGGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGNNNNNNNNNNNGGGTATAGCAGCAGCTGGTANNNNNNNNNNTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKAREGGYSSSWYGLGYWGQGTLVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXXXGYSSSWXXXXYWGQGTLVTVSS | 1 | 295 | 307.0 | 326.0 | 337 | 373 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GGGTATAGCAGCAGCTGGTA | GYSSSW | GGGTATAGCAGCAGCTGGTA | GYSSSW | TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YWGQGTLVTVSS | TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YWGQGTLVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAAAGCGCGGGAAGGGGGGTATAGCAGCAGCTGGTATGGGCTGGGGTAC | AKAREGGYSSSWYGLGY | TGTGCGAAAGCGCGGGAAGGGGGGTATAGCAGCAGCTGGTATGGGCTGGGGTACTGG | 57.0 | CAKAREGGYSSSWYGLGYW | 19.0 | 461.479 | 39.141 | 71.827 | 136S295M149S1N | 442S20M118S1N | 472S11N37M71S | 8.119000000000001e-132 | 4.287e-07 | 1.349e-16 | 100.0 | 100.0 | 100.0 | 137 | 431 | 1 | 295 | 443.0 | 462.0 | 1.0 | 20.0 | 473 | 509 | 12 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 476.0 | 508.0 | 425.0 | 475.0 | CGCGGGAAGGG | 11 | TGGGCTGGGG | 10.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'A', '108 ': 'R', '109 ': 'E', '110 ': 'G', '111 ': 'G', '111A': 'Y', '111B': 'S', '112B': 'S', '112A': 'S', '112 ': 'W', '113 ': 'Y', '114 ': 'G', '115 ': 'L', '116 ': 'G', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGGAGACACCGGAAA-1_contig_1 | GGGGAGGAGTCAGTCCCAACCAGGACACAGCATGGACATGAGGGTCCCTGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCTCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-33*01 | null | IGKJ4*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPLTFGGGTKVEIK | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPLTFGGGTKVEIK | 1 | 284 | null | null | 285 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLP | null | null | null | null | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGT | DIQMTQSPSSLSASVGDRVTITCQAS | CAGGACATTAGCAACTAT | QDISNY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAC | LNWYQQKPGKAPKLLIY | GATGCATCC | DAS | AATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGT | NLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAACAGTATGATAATCTCCCGCTCACT | QQYDNLPLT | TGTCAACAGTATGATAATCTCCCGCTCACTTTC | 33.0 | CQQYDNLPLTF | 11.0 | 444.34 | null | 73.749 | 97S284M174S3N | null | 381S38M136S | 1.125e-126 | null | 3.402e-17 | 100.0 | null | 100.0 | 98 | 381 | 1 | 284 | null | null | null | null | 382 | 419 | 1 | 38 | 98 | 175 | 176 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 389.0 | 418.0 | 362.0 | 388.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'Q', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'D', '29 ': 'I', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'L', '68 ': 'E', '69 ': 'T', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'F', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'I', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'D', '109 ': 'N', '114 ': 'L', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGGAGACACCTTGTC-1_contig_1 | ACATGGGAAATACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACATCTGTGGTTCTTCCTTCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAAGGAGTCTTAGGGGCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-59*08 | IGHD3-10*01 | IGHJ6*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAAGGAGTCTTAGGGGCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGANGGAGTNNNNNNNNCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARRSLRGYYYGMDVWGQGTTVTVSS | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXSXXXYYYGMDVWGQGTTVTVSS | 1 | 291 | 293.0 | 297.0 | 306 | 360 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGA | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGA | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | GGAGT | S | GGAGT | S | CTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | CTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGTAGTTACTAC | GGSISSYY | TGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTAT | WSWIRQPPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAAGGAGTCTTAGGGGCTACTACTACGGTATGGACGTC | ARRSLRGYYYGMDV | TGTGCGAGAAGGAGTCTTAGGGGCTACTACTACGGTATGGACGTCTGG | 48.0 | CARRSLRGYYYGMDVW | 16.0 | 455.247 | 10.301 | 106.435 | 103S291M141S2N | 395S17N5M135S9N | 408S7N55M72S | 5.639e-130 | 189.8 | 4.7429999999999996e-27 | 100.0 | 100.0 | 100.0 | 104 | 394 | 1 | 291 | 396.0 | 400.0 | 18.0 | 22.0 | 409 | 463 | 8 | 62 | 104 | 178 | 179 | 202 | 203 | 253 | 254 | 274 | 275 | 388 | 431.0 | 463.0 | 389.0 | 430.0 | A | 1 | CTTAGGGG | 8.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'R', '108 ': 'S', '109 ': 'L', '110 ': 'R', '111 ': 'G', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGGAGACACCTTGTC-1_contig_2 | GGGAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTTTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ3*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTTTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTTTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPFTFGPGTKVDIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPFTFGPGTKVDIK | 1 | 285 | null | null | 286 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCT | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCT | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | null | null | null | null | TTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FTFGPGTKVDIK | TTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FTFGPGTKVDIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCCCTGGGACCAAAGTGGATATCAAA | FGPGTKVDIK | CAACAGAGTTACAGTACCCCTTTCACT | QQSYSTPFT | TGTCAACAGAGTTACAGTACCCCTTTCACTTTC | 33.0 | CQQSYSTPFTF | 11.0 | 445.898 | null | 71.827 | 89S285M173S2N | null | 374S1N37M136S | 3.763e-127 | null | 1.271e-16 | 100.0 | null | 100.0 | 90 | 374 | 1 | 285 | null | null | null | null | 375 | 411 | 2 | 38 | 90 | 167 | 168 | 185 | 186 | 236 | 237 | 245 | 246 | 353 | 381.0 | 410.0 | 354.0 | 380.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'P', '116 ': 'F', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'P', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'D', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGGAGACACGGTGTC-1_contig_1 | TGGGGACTCCTGTGCCCCACCATGGACACACTTTGCTACACACTCCTGCTGCTGACCACCCCTTCCTGGGTCTTGTCCCAGGTCACCTTGAAGGAGTCTGGTCCTGTGCTGGTGAAACCCACAGAGACCCTCACGCTGACCTGCACCGTCTCTGGGTTCTCACTCAGCAATGCTAGAATGGGTGTGAGCTGGATCCGTCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACACATTTTTTCGAATGACGAAAAATCCTACAGCACATCTCTGAAGAGCAGGCTCACCATCTCCAAGGACACCTCCAAAAGCCAGGTGGTCCTTACCATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACGGATACGTTGGTATAGCAGTGGCTGGCCCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV2-26*01 | IGHD6-19*01 | IGHJ4*02 | CAGGTCACCTTGAAGGAGTCTGGTCCTGTGCTGGTGAAACCCACAGAGACCCTCACGCTGACCTGCACCGTCTCTGGGTTCTCACTCAGCAATGCTAGAATGGGTGTGAGCTGGATCCGTCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACACATTTTTTCGAATGACGAAAAATCCTACAGCACATCTCTGAAGAGCAGGCTCACCATCTCCAAGGACACCTCCAAAAGCCAGGTGGTCCTTACCATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACGGATACGTTGGTATAGCAGTGGCTGGCCCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTCACCTTGAAGGAGTCTGGTCCTGTGCTGGTGAAACCCACAGAGACCCTCACGCTGACCTGCACCGTCTCTGGGTTCTCACTCAGCAATGCTAGAATGGGTGTGAGCTGGATCCGTCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACACATTTTTTCGAATGACGAAAAATCCTACAGCACATCTCTGAAGAGCAGGCTCACCATCTCCAAGGACACCTCCAAAAGCCAGGTGGTCCTTACCATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACGGATACNNNGGTATAGCAGTGGCTGGNNNGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVTLKESGPVLVKPTETLTLTCTVSGFSLSNARMGVSWIRQPPGKALEWLAHIFSNDEKSYSTSLKSRLTISKDTSKSQVVLTMTNMDPVDTATYYCARIRWYSSGWPDYWGQGTLVTVSS | QVTLKESGPVLVKPTETLTLTCTVSGFSLSNARMGVSWIRQPPGKALEWLAHIFSNDEKSYSTSLKSRLTISKDTSKSQVVLTMTNMDPVDTATYYCARIXXYSSGWXDYWGQGTLVTVSS | 1 | 301 | 305.0 | 321.0 | 325 | 364 | CAGGTCACCTTGAAGGAGTCTGGTCCTGTGCTGGTGAAACCCACAGAGACCCTCACGCTGACCTGCACCGTCTCTGGGTTCTCACTCAGCAATGCTAGAATGGGTGTGAGCTGGATCCGTCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACACATTTTTTCGAATGACGAAAAATCCTACAGCACATCTCTGAAGAGCAGGCTCACCATCTCCAAGGACACCTCCAAAAGCCAGGTGGTCCTTACCATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACGGATAC | QVTLKESGPVLVKPTETLTLTCTVSGFSLSNARMGVSWIRQPPGKALEWLAHIFSNDEKSYSTSLKSRLTISKDTSKSQVVLTMTNMDPVDTATYYCARI | CAGGTCACCTTGAAGGAGTCTGGTCCTGTGCTGGTGAAACCCACAGAGACCCTCACGCTGACCTGCACCGTCTCTGGGTTCTCACTCAGCAATGCTAGAATGGGTGTGAGCTGGATCCGTCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACACATTTTTTCGAATGACGAAAAATCCTACAGCACATCTCTGAAGAGCAGGCTCACCATCTCCAAGGACACCTCCAAAAGCCAGGTGGTCCTTACCATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACGGATAC | QVTLKESGPVLVKPTETLTLTCTVSGFSLSNARMGVSWIRQPPGKALEWLAHIFSNDEKSYSTSLKSRLTISKDTSKSQVVLTMTNMDPVDTATYYCARI | GGTATAGCAGTGGCTGG | YSSGW | GGTATAGCAGTGGCTGG | YSSGW | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTCACCTTGAAGGAGTCTGGTCCTGTGCTGGTGAAACCCACAGAGACCCTCACGCTGACCTGCACCGTCTCT | QVTLKESGPVLVKPTETLTLTCTVS | GGGTTCTCACTCAGCAATGCTAGAATGGGT | GFSLSNARMG | GTGAGCTGGATCCGTCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACAC | VSWIRQPPGKALEWLAH | ATTTTTTCGAATGACGAAAAA | IFSNDEK | TCCTACAGCACATCTCTGAAGAGCAGGCTCACCATCTCCAAGGACACCTCCAAAAGCCAGGTGGTCCTTACCATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGT | SYSTSLKSRLTISKDTSKSQVVLTMTNMDPVDTATYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCACGGATACGTTGGTATAGCAGTGGCTGGCCCGACTAC | ARIRWYSSGWPDY | TGTGCACGGATACGTTGGTATAGCAGTGGCTGGCCCGACTACTGG | 45.0 | CARIRWYSSGWPDYW | 15.0 | 470.828 | 33.373 | 77.595 | 78S301M134S | 382S1N17M114S3N | 402S8N40M71S | 1.1e-134 | 2.062e-05 | 2.184e-18 | 100.0 | 100.0 | 100.0 | 79 | 379 | 1 | 301 | 383.0 | 399.0 | 2.0 | 18.0 | 403 | 442 | 9 | 48 | 79 | 153 | 154 | 183 | 184 | 234 | 235 | 255 | 256 | 369 | 409.0 | 441.0 | 370.0 | 408.0 | GTT | 3 | CCC | 3.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'T', '4 ': 'L', '5 ': 'K', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'V', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'T', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'T', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'S', '30 ': 'L', '31 ': 'S', '34 ': 'N', '35 ': 'A', '36 ': 'R', '37 ': 'M', '38 ': 'G'}, 'fwh2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'L', '54 ': 'A', '55 ': 'H'}, 'cdrh2': {'56 ': 'I', '57 ': 'F', '58 ': 'S', '59 ': 'N', '63 ': 'D', '64 ': 'E', '65 ': 'K'}, 'fwh3': {'66 ': 'S', '67 ': 'Y', '68 ': 'S', '69 ': 'T', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'L', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'K', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'S', '86 ': 'Q', '87 ': 'V', '88 ': 'V', '89 ': 'L', '90 ': 'T', '91 ': 'M', '92 ': 'T', '93 ': 'N', '94 ': 'M', '95 ': 'D', '96 ': 'P', '97 ': 'V', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'I', '108 ': 'R', '109 ': 'W', '110 ': 'Y', '111 ': 'S', '112 ': 'S', '113 ': 'G', '114 ': 'W', '115 ': 'P', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGGAGACACGGTGTC-1_contig_2 | GCATGTCCCTCCCAGCTGCCCTACCTTCCAGAGCCCATATCAATGCCTGGGTCAGAGCTCTGGGGAGGAACTGCTCAGTTAGGACCCAGACGGAACCATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACTGGAGAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-15*01 | null | IGKJ1*01 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPTFGQGTKVEIK | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPTFGQGTKVEIK | 1 | 284 | null | null | 285 | 319 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWP | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWP | null | null | null | null | GACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVMTQSPATLSVSPGERATLSCRAS | CAGAGTGTTAGCAGCAAC | QSVSSN | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | ACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGT | TRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAGTATAATAACTGGCCGACG | QQYNNWPT | TGTCAGCAGTATAATAACTGGCCGACGTTC | 30.0 | CQQYNNWPTF | 10.0 | 444.34 | null | 67.981 | 157S284M171S3N | null | 441S3N35M136S | 1.2399999999999999e-126 | null | 2.048e-15 | 100.0 | null | 100.0 | 158 | 441 | 1 | 284 | null | null | null | null | 442 | 476 | 4 | 38 | 158 | 235 | 236 | 253 | 254 | 304 | 305 | 313 | 314 | 421 | 446.0 | 475.0 | 422.0 | 445.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'N'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '114 ': 'N', '115 ': 'W', '116 ': 'P', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGGAGACAGCATACT-1_contig_2 | GGGGCTTTCTGAGAGTCATGGATCTCATGTGCAAGAAAATGAAGCACCTGTGGTTCTTCCTCCTGCTGGTGGCGGCTCCCAGATGGGTCCTGTCCCAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACATAGGGCGGGCTACGGTGACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-39*01 | IGHD4-17*01 | IGHJ6*02 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACATAGGGCGGGCTACGGTGACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACANNNNNNNNNCTACGGTGACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARHRAGYGDYYYYGMDVWGQGTTVTVSS | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXXXYGDYYYYGMDVWGQGTTVTVSS | 1 | 299 | 309.0 | 316.0 | 317 | 375 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACA | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACA | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CTACGGTG | YG | CTACGGTG | YG | ACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | ACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QLQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGCAGTAGTAGTTACTAC | GGSISSSSYY | TGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGT | WGWIRQPPGKGLEWIGS | ATCTATTATAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGACATAGGGCGGGCTACGGTGACTACTACTACTACGGTATGGACGTC | ARHRAGYGDYYYYGMDV | TGTGCGAGACATAGGGCGGGCTACGGTGACTACTACTACTACGGTATGGACGTCTGG | 57.0 | CARHRAGYGDYYYYGMDVW | 19.0 | 467.712 | 16.069 | 114.126 | 95S299M148S | 403S3N8M131S5N | 411S3N59M72S | 1.0109999999999999e-133 | 3.529 | 2.3269999999999998e-29 | 100.0 | 100.0 | 100.0 | 96 | 394 | 1 | 299 | 404.0 | 411.0 | 4.0 | 11.0 | 412 | 470 | 4 | 62 | 96 | 170 | 171 | 200 | 201 | 251 | 252 | 272 | 273 | 386 | 438.0 | 470.0 | 387.0 | 437.0 | TAGGGCGGG | 9 | null | 0.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'L', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'G', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'H', '108 ': 'R', '109 ': 'A', '110 ': 'G', '111 ': 'Y', '111A': 'G', '111B': 'D', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGGAGACAGCATACT-1_contig_1 | ACCTTCCAGAGCCCATATCAATGCCTGTGTCAGAGCCCTGGGGAGGAACTGCTCAGTTAGGACCCAGAGGGAACCATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-11*01 | null | IGKJ4*01 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPLTFGGGTKVEIK | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPLTFGGGTKVEIK | 1 | 286 | null | null | 287 | 322 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWP | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWP | null | null | null | null | TCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | TCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPATLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCTAC | QSVSSY | TTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GATGCATCC | DAS | AACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGT | NRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAGCAGCGTAGCAACTGGCCTCTCACT | QQRSNWPLT | TGTCAGCAGCGTAGCAACTGGCCTCTCACTTTC | 33.0 | CQQRSNWPLTF | 11.0 | 447.456 | null | 69.904 | 135S286M172S1N | null | 421S2N36M136S | 1.383e-127 | null | 5.232e-16 | 100.0 | null | 100.0 | 136 | 421 | 1 | 286 | null | null | null | null | 422 | 457 | 3 | 38 | 136 | 213 | 214 | 231 | 232 | 282 | 283 | 291 | 292 | 399 | 427.0 | 456.0 | 400.0 | 426.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'R', '108 ': 'S', '109 ': 'N', '114 ': 'W', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGGAGACAGGGATTG-1_contig_2 | TGGGGATGCTTTCTGAGAGTCATGGATCTCATGTGCAAGAAAATGAAGCACCTGTGGTTCTTCCTCCTGCTGGTGGCGGCTCCCAGATGGGTCCTGTCCCAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGAGTCGGTGTAGTGGTGGTAGCTGCTACTTCTTGTTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-39*01 | IGHD2-15*01 | IGHJ5*02 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGAGTCGGTGTAGTGGTGGTAGCTGCTACTTCTTGTTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGANNNNNTGTAGTGGTGGTAGCTGCTACTNNNNNNTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARVGVVVVAATSCWFDPWGQGTLVTVSS | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXVVVVAATXXWFDPWGQGTLVTVSS | 1 | 297 | 303.0 | 324.0 | 331 | 376 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGA | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGA | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | TGTAGTGGTGGTAGCTGCTACT | VVVVAAT | TGTAGTGGTGGTAGCTGCTACT | VVVVAAT | TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QLQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGCAGTAGTAGTTACTAC | GGSISSSSYY | TGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGT | WGWIRQPPGKGLEWIGS | ATCTATTATAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGTCGGTGTAGTGGTGGTAGCTGCTACTTCTTGTTGGTTCGACCCC | ARVGVVVVAATSCWFDP | TGTGCGAGAGTCGGTGTAGTGGTGGTAGCTGCTACTTCTTGTTGGTTCGACCCCTGG | 57.0 | CARVGVVVVAATSCWFDPW | 19.0 | 464.595 | 42.986 | 89.131 | 99S297M150S2N | 401S7N22M123S2N | 429S5N46M71S | 8.835999999999999e-133 | 2.805e-08 | 7.838e-22 | 100.0 | 100.0 | 100.0 | 100 | 396 | 1 | 297 | 402.0 | 423.0 | 8.0 | 29.0 | 430 | 475 | 6 | 51 | 100 | 174 | 175 | 204 | 205 | 255 | 256 | 276 | 277 | 390 | 442.0 | 474.0 | 391.0 | 441.0 | GTCGG | 5 | TCTTGT | 6.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'L', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'G', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'V', '108 ': 'G', '109 ': 'V', '110 ': 'V', '111 ': 'V', '111A': 'V', '111B': 'A', '112B': 'A', '112A': 'T', '112 ': 'S', '113 ': 'C', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGGAGACAGGGATTG-1_contig_1 | GGGGTCACAAGAGGCAGCGCTCTCGGGACGTCTCCACCATGGCCTGGGCTCTGCTGCTCCTCACTCTCCTCACTCAGGACACAGGGTCCTGGGCCCAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGATGTTGGGAGTTATAACCTTGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGGCAGTAAGCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACAATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCTGCTCATATGCAGGTAGTAGCACCCCGAAGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV2-23*01 | null | IGLJ3*02 | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGATGTTGGGAGTTATAACCTTGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGGCAGTAAGCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACAATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCTGCTCATATGCAGGTAGTAGCACCCCGAAGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGATGTTGGGAGTTATAACCTTGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGGCAGTAAGCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACAATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCTGCTCATATGCAGGTAGTAGCACNNNNNNGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEGSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTPKFGGGTKLTVL | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEGSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTXXFGGGTKLTVL | 1 | 293 | null | null | 300 | 331 | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGATGTTGGGAGTTATAACCTTGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGGCAGTAAGCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACAATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCTGCTCATATGCAGGTAGTAGCAC | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEGSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSST | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGATGTTGGGAGTTATAACCTTGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGGCAGTAAGCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACAATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCTGCTCATATGCAGGTAGTAGCAC | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEGSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSST | null | null | null | null | GTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | FGGGTKLTVL | GTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | FGGGTKLTVL | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACC | QSALTQPASVSGSPGQSITISCTGT | AGCAGTGATGTTGGGAGTTATAACCTT | SSDVGSYNL | GTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTAT | VSWYQQHPGKAPKLMIY | GAGGGCAGT | EGS | AAGCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACAATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGC | KRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | TGCTCATATGCAGGTAGTAGCACCCCGAAG | CSYAGSSTPK | TGCTGCTCATATGCAGGTAGTAGCACCCCGAAGTTC | 36.0 | CCSYAGSSTPKF | 12.0 | 458.363 | null | 62.213 | 95S293M249S5N | null | 394S6N32M211S | 7.768e-131 | null | 1.163e-13 | 100.0 | null | 100.0 | 96 | 388 | 1 | 293 | null | null | null | null | 395 | 426 | 7 | 38 | 96 | 170 | 171 | 197 | 198 | 248 | 249 | 257 | 258 | 365 | 396.0 | 425.0 | 366.0 | 395.0 | CCCGAA | 6 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'A', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'A', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'G', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'S', '19 ': 'I', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'T'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'D', '30 ': 'V', '31 ': 'G', '35 ': 'S', '36 ': 'Y', '37 ': 'N', '38 ': 'L'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'M', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'G', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'S', '74 ': 'N', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'C', '106 ': 'S', '107 ': 'Y', '108 ': 'A', '109 ': 'G', '113 ': 'S', '114 ': 'S', '115 ': 'T', '116 ': 'P', '117 ': 'K'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGGAGACAGTAACGG-1_contig_2 | GAGCTCTGGGAGAGGAGCCCAGCACTAGAAGTCGGCGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGTGGCTGGGCTCGTAAGTGGCCTGATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30*18 | IGHD6-19*01 | IGHJ4*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGTGGCTGGGCTCGTAAGTGGCCTGATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGTGGCTGGNNNNNNNNNNNNNNNNNTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKVAGLVSGLIDYWGQGTLVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKVAGXXXXXXDYWGQGTLVTVSS | 1 | 295 | 296.0 | 302.0 | 320 | 361 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | TGGCTGG | AG | TGGCTGG | AG | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGGC | GFTFSSYG | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGTAATAAA | ISYDGSNK | TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAAAGTGGCTGGGCTCGTAAGTGGCCTGATTGACTAC | AKVAGLVSGLIDY | TGTGCGAAAGTGGCTGGGCTCGTAAGTGGCCTGATTGACTACTGG | 45.0 | CAKVAGLVSGLIDYW | 15.0 | 461.479 | 14.146 | 81.44 | 137S295M137S1N | 432S11N7M130S3N | 456S6N42M71S | 8.002e-132 | 14.06 | 1.689e-19 | 100.0 | 100.0 | 100.0 | 138 | 432 | 1 | 295 | 433.0 | 439.0 | 12.0 | 18.0 | 457 | 498 | 7 | 48 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 465.0 | 497.0 | 426.0 | 464.0 | null | 0 | GCTCGTAAGTGGCCTGA | 17.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'V', '108 ': 'A', '109 ': 'G', '110 ': 'L', '111 ': 'V', '112 ': 'S', '113 ': 'G', '114 ': 'L', '115 ': 'I', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGGAGACAGTAACGG-1_contig_1 | AGAGCTCTGGAGAAGAGCTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCAGGGACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-20*01 | null | IGKJ2*01 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCAGGGACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCNNNNACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPGTFGQGTKLEIK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPXTFGQGTKLEIK | 1 | 287 | null | null | 292 | 325 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | null | null | null | null | ACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | TFGQGTKLEIK | ACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | TFGQGTKLEIK | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPGTLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCAGCTAC | QSVSSSY | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAGCAGTATGGTAGCTCACCAGGGACT | QQYGSSPGT | TGTCAGCAGTATGGTAGCTCACCAGGGACTTTT | 33.0 | CQQYGSSPGTF | 11.0 | 449.014 | null | 66.059 | 104S287M174S3N | null | 395S5N34M136S | 4.49e-128 | null | 7.158e-15 | 100.0 | null | 100.0 | 105 | 391 | 1 | 287 | null | null | null | null | 396 | 429 | 6 | 39 | 105 | 182 | 183 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 399.0 | 428.0 | 372.0 | 398.0 | AGGG | 4 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'G', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'G', '109 ': 'S', '114 ': 'S', '115 ': 'P', '116 ': 'G', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGGAGAGTACGCTGC-1_contig_1 | CTTATATGGGGAGCTCTGGGAGAGGAGCCCCAGCCCTGAGATTCCCAGGTGTTTCCATTCAGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTGGGACTGAGCTGGATTTTCCTTTTGGCTATTTTAAAAGGTGTCCAGTGTGAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATACCGGTGGTAACTCGGGTGAGTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-9*01 | IGHD2-21*02 | IGHJ4*02 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATACCGGTGGTAACTCGGGTGAGTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATANNGGTGGTGACTNNNNNNNNTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDTGGNSGEFDYWGQGTLVTVSS | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDXGGDXXXFDYWGQGTLVTVSS | 1 | 298 | 301.0 | 310.0 | 319 | 361 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATA | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKD | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATA | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKD | GGTGGTAACT | GGN | GGTGGTGACT | GGD | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGRSLRLSCAAS | GGATTCACCTTTGATGATTATGCC | GFTFDDYA | ATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGT | MHWVRQAPGKGLEWVSG | ATTAGTTGGAATAGTGGTAGCATA | ISWNSGSI | GGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGT | GYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCAAAAGATACCGGTGGTAACTCGGGTGAGTTTGACTAC | AKDTGGNSGEFDY | TGTGCAAAAGATACCGGTGGTAACTCGGGTGAGTTTGACTACTGG | 45.0 | CAKDTGGNSGEFDYW | 15.0 | 466.153 | 14.146 | 83.363 | 148S298M134S | 448S10N10M122S8N | 466S5N43M71S | 3.18e-133 | 14.34 | 4.5430000000000006e-20 | 100.0 | 90.0 | 100.0 | 149 | 446 | 1 | 298 | 449.0 | 458.0 | 11.0 | 20.0 | 467 | 509 | 6 | 48 | 149 | 223 | 224 | 247 | 248 | 298 | 299 | 322 | 323 | 436 | 476.0 | 508.0 | 437.0 | 475.0 | CC | 2 | CGGGTGAG | 8.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'D', '36 ': 'D', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'G'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'W', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'I'}, 'fwh3': {'66 ': 'G', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'L', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'D', '108 ': 'T', '109 ': 'G', '110 ': 'G', '111 ': 'N', '112 ': 'S', '113 ': 'G', '114 ': 'E', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGGAGAGTACGCTGC-1_contig_2 | GGGAGAGCCCTGGGGAGGAACTGCTCAGTTAGGACCCAGAGGGAACCATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCTGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-11*01 | null | IGKJ1*01 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCTGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCNGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWLWTFGQGTKVEIK | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWXWTFGQGTKVEIK | 1 | 283 | null | null | 285 | 322 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNW | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNW | null | null | null | null | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPATLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCTAC | QSVSSY | TTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GATGCATCC | DAS | AACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGT | NRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAGCGTAGCAACTGGCTGTGGACG | QQRSNWLWT | TGTCAGCAGCGTAGCAACTGGCTGTGGACGTTC | 33.0 | CQQRSNWLWTF | 11.0 | 442.782 | null | 73.749 | 107S283M175S4N | null | 391S38M136S | 3.376e-126 | null | 3.465e-17 | 100.0 | null | 100.0 | 108 | 390 | 1 | 283 | null | null | null | null | 392 | 429 | 1 | 38 | 108 | 185 | 186 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 399.0 | 428.0 | 372.0 | 398.0 | T | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'R', '108 ': 'S', '109 ': 'N', '114 ': 'W', '115 ': 'L', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGGAGAGTAGGACAC-1_contig_1 | ACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACATCTGTGGTTCTTCCTCCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGAAGGTGGAACGGGGTTGGTACTATGGTTCGGGGAGGCGGGAACTTATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-61*02 | IGHD3-10*01 | IGHJ4*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGAAGGTGGAACGGGGTTGGTACTATGGTTCGGGGAGGCGGGAACTTATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGANNNNNNNNNNNNNNNNNTACTATGGTTCGGGGAGNNNNNNNNNNNTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAREGGTGLVLWFGEAGTYDYWGQGTLVTVSS | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXXXXXXLWFGEXXXXDYWGQGTLVTVSS | 1 | 299 | 317.0 | 333.0 | 345 | 385 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | TACTATGGTTCGGGGAG | LWFGE | TACTATGGTTCGGGGAG | LWFGE | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSQTLSLTCTVS | GGTGGCTCCATCAGCAGTGGTAGTTACTAC | GGSISSGSYY | TGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGT | WSWIRQPAGKGLEWIGR | ATCTATACCAGTGGGAGCACC | IYTSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGAAGGTGGAACGGGGTTGGTACTATGGTTCGGGGAGGCGGGAACTTATGACTAC | AREGGTGLVLWFGEAGTYDY | TGTGCGAGAGAAGGTGGAACGGGGTTGGTACTATGGTTCGGGGAGGCGGGAACTTATGACTACTGG | 66.0 | CAREGGTGLVLWFGEAGTYDYW | 22.0 | 467.712 | 33.373 | 79.518 | 92S299M157S | 408S4N17M123S10N | 436S7N41M71S | 1.023e-133 | 2.205e-05 | 6.162e-19 | 100.0 | 100.0 | 100.0 | 93 | 391 | 1 | 299 | 409.0 | 425.0 | 5.0 | 21.0 | 437 | 477 | 8 | 48 | 93 | 167 | 168 | 197 | 198 | 248 | 249 | 269 | 270 | 383 | 444.0 | 476.0 | 384.0 | 443.0 | AGGTGGAACGGGGTTGG | 17 | GCGGGAACTTA | 11.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'G', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'A', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'T', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'E', '108 ': 'G', '109 ': 'G', '110 ': 'T', '111 ': 'G', '111A': 'L', '111B': 'V', '111C': 'L', '112D': 'W', '112C': 'F', '112B': 'G', '112A': 'E', '112 ': 'A', '113 ': 'G', '114 ': 'T', '115 ': 'Y', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGGAGAGTAGGACAC-1_contig_2 | AGCTTCAGCTGTGGGTAGAGAAGACAGGACTCAGGACAATCTCCAGCATGGCCAGCTTCCCTCTCCTCCTCACCCTCCTCACTCACTGTGCAGGGTCCTGGGCCCAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTCAAGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAGGTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-44*01 | null | IGLJ1*01 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTCAAGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTCNNGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGQVFGTGTKVTVL | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGXVFGTGTKVTVL | 1 | 295 | null | null | 298 | 331 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTC | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTC | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNG | null | null | null | null | GTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | VFGTGTKVTVL | GTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | VFGTGTKVTVL | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGC | QSVLTQPPSASGTPGQRVTISCSGS | AGCTCCAACATCGGAAGTAATACT | SSNIGSNT | GTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTAT | VNWYQQLPGTAPKLLIY | AGTAATAAT | SNN | CAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGT | QRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYC | TTCGGAACTGGGACCAAGGTCACCGTCCTA | FGTGTKVTVL | GCAGCATGGGATGACAGCCTGAATGGTCAAGTC | AAWDDSLNGQV | TGTGCAGCATGGGATGACAGCCTGAATGGTCAAGTCTTC | 39.0 | CAAWDDSLNGQVF | 13.0 | 461.479 | null | 66.059 | 104S295M247S1N | null | 401S4N34M211S | 9.092000000000001e-132 | null | 8.205e-15 | 100.0 | null | 100.0 | 105 | 399 | 1 | 295 | null | null | null | null | 402 | 435 | 5 | 38 | 105 | 179 | 180 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 405.0 | 434.0 | 372.0 | 404.0 | AA | 2 | null | null | GTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'A', '12 ': 'S', '13 ': 'G', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'S', '37 ': 'N', '38 ': 'T'}, 'fwl2': {'39 ': 'V', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'S', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'Q', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'A', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'A', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'D', '110 ': 'S', '113 ': 'L', '114 ': 'N', '115 ': 'G', '116 ': 'Q', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'T', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGGAGAGTCAGAATA-1_contig_2 | TGGGGACCCAAAAACCACACCCCTCCTTGGGAGAATCCCCTAGATCACAGCTCCTCACCATGGACTGGACCTGGAGCATCCTTTTCTTGGTGGCAGCAGCAACAGGTGCCCACTCCCAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGGGATTGTAGTAGTACCAGCTGCTATGGGGGGGACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-18*01 | IGHD2-2*01 | IGHJ6*02 | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGGGATTGTAGTAGTACCAGCTGCTATGGGGGGGACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGATTGTAGTAGTACCAGCTGCTATGNNNNNNACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDCSSTSCYGGDYYGMDVWGQGTTVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDCSSTSCYXXXYYGMDVWGQGTTVTVSS | 1 | 296 | 297.0 | 319.0 | 326 | 378 | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGGGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAR | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAR | TTGTAGTAGTACCAGCTGCTATG | CSSTSCY | TTGTAGTAGTACCAGCTGCTATG | CSSTSCY | ACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYGMDVWGQGTTVTVSS | ACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYGMDVWGQGTTVTVSS | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGTTACACCTTTACCAGCTATGGT | GYTFTSYG | ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGG | ISWVRQAPGQGLEWMGW | ATCAGCGCTTACAATGGTAACACA | ISAYNGNT | AACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGGGATTGTAGTAGTACCAGCTGCTATGGGGGGGACTACTACGGTATGGACGTC | ARDCSSTSCYGGDYYGMDV | TGTGCGAGGGATTGTAGTAGTACCAGCTGCTATGGGGGGGACTACTACGGTATGGACGTCTGG | 63.0 | CARDCSSTSCYGGDYYGMDVW | 21.0 | 459.921 | 44.909 | 102.59 | 116S296M154S | 412S6N23M131S2N | 441S9N53M72S | 2.343e-131 | 7.674e-09 | 7.222000000000001e-26 | 99.662 | 100.0 | 100.0 | 117 | 412 | 1 | 296 | 413.0 | 435.0 | 7.0 | 29.0 | 442 | 494 | 10 | 62 | 117 | 191 | 192 | 215 | 216 | 266 | 267 | 290 | 291 | 404 | 462.0 | 494.0 | 405.0 | 461.0 | null | 0 | GGGGGG | 6.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'I', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'A', '59 ': 'Y', '62 ': 'N', '63 ': 'G', '64 ': 'N', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'L', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'T', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'R', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'C', '109 ': 'S', '110 ': 'S', '111 ': 'T', '111A': 'S', '111B': 'C', '111C': 'Y', '112C': 'G', '112B': 'G', '112A': 'D', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGGAGAGTCAGAATA-1_contig_1 | GATCAGGACTCCTCAGTTCACCTTCTCACAATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCTCTGGATCCAGTGGGGATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCTCCTACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV2-28*01 | null | IGKJ2*01 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCTCCTACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCTCCNACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPPTFGQGTKLEIK | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPPTFGQGTKLEIK | 1 | 302 | null | null | 304 | 337 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCTCC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPP | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCTCC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPP | null | null | null | null | ACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | TFGQGTKLEIK | ACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | TFGQGTKLEIK | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGT | DIVMTQSPLSLPVTPGEPASISCRSS | CAGAGCCTCCTGCATAGTAATGGATACAACTAT | QSLLHSNGYNY | TTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTAT | LDWYLQKPGQSPQLLIY | TTGGGTTCT | LGS | AATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGC | NRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | ATGCAAGCTCTACAAACTCCTCCTACT | MQALQTPPT | TGCATGCAAGCTCTACAAACTCCTCCTACTTTT | 33.0 | CMQALQTPPTF | 11.0 | 472.386 | null | 66.059 | 90S302M171S | null | 393S5N34M136S | 4.122e-135 | null | 7.132e-15 | 100.0 | null | 100.0 | 91 | 392 | 1 | 302 | null | null | null | null | 394 | 427 | 6 | 39 | 91 | 168 | 169 | 201 | 202 | 252 | 253 | 261 | 262 | 369 | 397.0 | 426.0 | 370.0 | 396.0 | T | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'L', '10 ': 'S', '11 ': 'L', '12 ': 'P', '13 ': 'V', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'P', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'L', '30 ': 'L', '31 ': 'H', '32 ': 'S', '34 ': 'N', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'D', '41 ': 'W', '42 ': 'Y', '43 ': 'L', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'Q', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'L', '57 ': 'G', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'K', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'G', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'M', '106 ': 'Q', '107 ': 'A', '108 ': 'L', '109 ': 'Q', '114 ': 'T', '115 ': 'P', '116 ': 'P', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACGGAGAGTGCCTGTG-1_contig_1 | ACAACCACACCCCTCCTAAGAAGAAGCCCCTAGACCACAGCTCCACACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCAACAGGTGCCCACTCCCAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCAACACTGGGAACCCAACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGTGCGAGCGACAGTCGCGCGCTGGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV7-4-1*02 | IGHD6-13*01 | IGHJ4*02 | CAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCAACACTGGGAACCCAACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGTGCGAGCGACAGTCGCGCGCTGGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCAACACTGGGAACCCAACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGTGCGAGAGANNNNNNNNNGCTGGNCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGSELKKPGASVKVSCKASGYTFTSYAMNWVRQAPGQGLEWMGWINTNTGNPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCASDSRALGYWGQGTLVTVSS | QVQLVQSGSELKKPGASVKVSCKASGYTFTSYAMNWVRQAPGQGLEWMGWINTNTGNPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCARXXXXLXYWGQGTLVTVSS | 1 | 296 | 306.0 | 310.0 | 312 | 349 | CAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCAACACTGGGAACCCAACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGTGCGAGCGA | QVQLVQSGSELKKPGASVKVSCKASGYTFTSYAMNWVRQAPGQGLEWMGWINTNTGNPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCAS | CAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCAACACTGGGAACCCAACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGSELKKPGASVKVSCKASGYTFTSYAMNWVRQAPGQGLEWMGWINTNTGNPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCAR | GCTGG | L | GCTGG | L | CTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YWGQGTLVTVSS | CTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YWGQGTLVTVSS | CAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCT | QVQLVQSGSELKKPGASVKVSCKAS | GGATACACCTTCACTAGCTATGCT | GYTFTSYA | ATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGG | MNWVRQAPGQGLEWMGW | ATCAACACCAACACTGGGAACCCA | INTNTGNP | ACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGT | TYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGCGACAGTCGCGCGCTGGGCTAC | ASDSRALGY | TGTGCGAGCGACAGTCGCGCGCTGGGCTACTGG | 33.0 | CASDSRALGYW | 11.0 | 459.921 | 10.301 | 73.749 | 106S296M124S | 411S13N5M110S3N | 417S10N38M71S | 2.169e-131 | 186.5 | 3.221e-17 | 99.662 | 100.0 | 100.0 | 107 | 402 | 1 | 296 | 412.0 | 416.0 | 14.0 | 18.0 | 418 | 455 | 11 | 48 | 107 | 181 | 182 | 205 | 206 | 256 | 257 | 280 | 281 | 394 | 422.0 | 454.0 | 395.0 | 421.0 | CAGTCGCGC | 9 | G | 1.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'S', '11 ': 'E', '12 ': 'L', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'T', '59 ': 'N', '62 ': 'T', '63 ': 'G', '64 ': 'N', '65 ': 'P'}, 'fwh3': {'66 ': 'T', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'G', '71 ': 'F', '72 ': 'T', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'V', '78 ': 'F', '79 ': 'S', '80 ': 'L', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'V', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'S', '107 ': 'D', '108 ': 'S', '109 ': 'R', '114 ': 'A', '115 ': 'L', '116 ': 'G', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACGGAGAGTGCCTGTG-1_contig_2 | AGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAAATGTGACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCCGAGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-5*03 | null | IGKJ1*01 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCCGAGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCCNNGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSPRTFGQGTKVEIK | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSPXTFGQGTKVEIK | 1 | 287 | null | null | 290 | 325 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSP | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSP | null | null | null | null | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQMTQSPSTLSASVGDRVTITCRAS | CAGAGTATTAGTAGCTGG | QSISSW | TTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | AAGGCGTCT | KAS | AGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGC | SLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAACAGTATAATAGTTATTCTCCGAGGACG | QQYNSYSPRT | TGCCAACAGTATAATAGTTATTCTCCGAGGACGTTC | 36.0 | CQQYNSYSPRTF | 12.0 | 449.014 | null | 69.904 | 93S287M174S | null | 382S2N36M136S | 4.398e-128 | null | 4.881e-16 | 100.0 | null | 100.0 | 94 | 380 | 1 | 287 | null | null | null | null | 383 | 418 | 3 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 388.0 | 417.0 | 358.0 | 387.0 | GA | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'W'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'K', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'D', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'S', '113 ': 'Y', '114 ': 'S', '115 ': 'P', '116 ': 'R', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
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