meta_Run stringclasses 42
values | meta_Link stringclasses 1
value | meta_Author stringclasses 1
value | meta_Species stringclasses 1
value | meta_Age stringclasses 4
values | meta_BSource stringclasses 1
value | meta_BType stringclasses 4
values | meta_Vaccine stringclasses 0
values | meta_Disease stringclasses 2
values | meta_Subject stringclasses 4
values | meta_Longitudinal stringclasses 1
value | meta_Unique sequences int64 843 19.8k | meta_Isotype stringclasses 1
value | meta_Chain stringclasses 1
value | source_file stringclasses 42
values | sequence_id_heavy stringlengths 27 27 | sequence_heavy stringlengths 426 1.13k | locus_heavy stringclasses 1
value | stop_codon_heavy stringclasses 1
value | vj_in_frame_heavy stringclasses 1
value | v_frameshift_heavy stringclasses 1
value | productive_heavy stringclasses 1
value | rev_comp_heavy stringclasses 1
value | complete_vdj_heavy stringclasses 2
values | v_call_heavy stringclasses 226
values | d_call_heavy stringclasses 29
values | j_call_heavy stringclasses 13
values | sequence_alignment_heavy stringlengths 322 493 | germline_alignment_heavy stringlengths 322 493 | sequence_alignment_aa_heavy stringlengths 107 164 | germline_alignment_aa_heavy stringlengths 107 164 | v_alignment_start_heavy stringclasses 1
value | v_alignment_end_heavy stringclasses 77
values | d_alignment_start_heavy stringclasses 98
values | d_alignment_end_heavy stringclasses 103
values | j_alignment_start_heavy stringclasses 199
values | j_alignment_end_heavy stringclasses 205
values | v_sequence_alignment_heavy stringlengths 219 352 | v_sequence_alignment_aa_heavy stringlengths 73 117 | v_germline_alignment_heavy stringlengths 219 352 | v_germline_alignment_aa_heavy stringlengths 73 101 | d_sequence_alignment_heavy stringlengths 5 37 ⌀ | d_sequence_alignment_aa_heavy stringlengths 1 12 ⌀ | d_germline_alignment_heavy stringlengths 5 37 ⌀ | d_germline_alignment_aa_heavy stringlengths 1 12 ⌀ | j_sequence_alignment_heavy stringlengths 22 63 | j_sequence_alignment_aa_heavy stringlengths 7 20 | j_germline_alignment_heavy stringlengths 22 63 | j_germline_alignment_aa_heavy stringclasses 194
values | fwr1_heavy stringlengths 42 117 | fwr1_aa_heavy stringlengths 14 39 | cdr1_heavy stringlengths 3 72 | cdr1_aa_heavy stringlengths 1 24 | fwr2_heavy stringlengths 30 93 | fwr2_aa_heavy stringlengths 10 31 | cdr2_heavy stringlengths 4 81 | cdr2_aa_heavy stringlengths 1 27 | fwr3_heavy stringlengths 96 175 | fwr3_aa_heavy stringlengths 32 58 | fwr4_heavy stringlengths 21 36 | fwr4_aa_heavy stringlengths 7 12 | cdr3_heavy stringlengths 9 174 | cdr3_aa_heavy stringlengths 3 58 | junction_heavy stringlengths 15 180 | junction_length_heavy stringclasses 45
values | junction_aa_heavy stringlengths 5 60 | junction_aa_length_heavy stringclasses 45
values | v_score_heavy stringclasses 174
values | d_score_heavy stringclasses 33
values | j_score_heavy stringclasses 49
values | v_cigar_heavy stringlengths 10 30 | d_cigar_heavy stringlengths 10 20 ⌀ | j_cigar_heavy stringlengths 7 17 | v_support_heavy stringlengths 5 23 | d_support_heavy stringlengths 3 9 ⌀ | j_support_heavy stringlengths 5 22 | v_identity_heavy stringlengths 4 6 | d_identity_heavy stringclasses 96
values | j_identity_heavy stringclasses 227
values | v_sequence_start_heavy stringclasses 274
values | v_sequence_end_heavy stringclasses 297
values | v_germline_start_heavy stringclasses 23
values | v_germline_end_heavy stringclasses 31
values | d_sequence_start_heavy stringclasses 301
values | d_sequence_end_heavy stringclasses 310
values | d_germline_start_heavy stringclasses 33
values | d_germline_end_heavy stringclasses 37
values | j_sequence_start_heavy stringclasses 460
values | j_sequence_end_heavy stringclasses 459
values | j_germline_start_heavy stringclasses 60
values | j_germline_end_heavy stringclasses 53
values | fwr1_start_heavy stringclasses 274
values | fwr1_end_heavy stringclasses 272
values | cdr1_start_heavy stringclasses 272
values | cdr1_end_heavy stringclasses 276
values | fwr2_start_heavy stringclasses 276
values | fwr2_end_heavy stringclasses 276
values | cdr2_start_heavy stringclasses 424
values | cdr2_end_heavy stringclasses 428
values | fwr3_start_heavy stringclasses 274
values | fwr3_end_heavy stringclasses 275
values | fwr4_start_heavy stringclasses 309
values | fwr4_end_heavy stringclasses 308
values | cdr3_start_heavy stringclasses 275
values | cdr3_end_heavy stringclasses 309
values | np1_heavy stringlengths 1 90 ⌀ | np1_length_heavy stringclasses 121
values | np2_heavy stringlengths 1 146 ⌀ | np2_length_heavy stringclasses 76
values | c_region_heavy stringlengths 1 490 ⌀ | Isotype_heavy stringclasses 6
values | Redundancy_heavy stringclasses 1
value | ANARCI_numbering_heavy stringlengths 848 2.11k | ANARCI_status_heavy stringclasses 451
values | sequence_id_light stringlengths 27 27 | sequence_light stringlengths 389 1.33k | locus_light stringclasses 3
values | stop_codon_light stringclasses 1
value | vj_in_frame_light stringclasses 1
value | v_frameshift_light stringclasses 1
value | productive_light stringclasses 1
value | rev_comp_light stringclasses 2
values | complete_vdj_light stringclasses 2
values | v_call_light stringclasses 122
values | d_call_light stringclasses 2
values | j_call_light stringclasses 16
values | sequence_alignment_light stringlengths 296 378 | germline_alignment_light stringlengths 296 378 | sequence_alignment_aa_light stringlengths 98 126 | germline_alignment_aa_light stringlengths 98 126 | v_alignment_start_light stringclasses 1
value | v_alignment_end_light stringclasses 65
values | d_alignment_start_light stringclasses 2
values | d_alignment_end_light stringclasses 2
values | j_alignment_start_light stringclasses 113
values | j_alignment_end_light stringclasses 121
values | v_sequence_alignment_light stringlengths 261 338 | v_sequence_alignment_aa_light stringlengths 86 112 | v_germline_alignment_light stringlengths 261 338 | v_germline_alignment_aa_light stringlengths 87 106 | d_sequence_alignment_light stringclasses 2
values | d_sequence_alignment_aa_light stringclasses 2
values | d_germline_alignment_light stringclasses 2
values | d_germline_alignment_aa_light stringclasses 2
values | j_sequence_alignment_light stringlengths 7 58 | j_sequence_alignment_aa_light stringlengths 2 19 | j_germline_alignment_light stringclasses 710
values | j_germline_alignment_aa_light stringclasses 146
values | fwr1_light stringlengths 60 108 | fwr1_aa_light stringlengths 20 36 | cdr1_light stringlengths 6 66 | cdr1_aa_light stringlengths 2 22 | fwr2_light stringlengths 43 78 | fwr2_aa_light stringlengths 14 26 | cdr2_light stringlengths 1 42 ⌀ | cdr2_aa_light stringlengths 2 14 ⌀ | fwr3_light stringlengths 87 159 | fwr3_aa_light stringlengths 29 53 | fwr4_light stringlengths 13 33 ⌀ | fwr4_aa_light stringlengths 4 11 ⌀ | cdr3_light stringlengths 12 69 | cdr3_aa_light stringlengths 4 23 | junction_light stringlengths 18 75 | junction_length_light stringclasses 19
values | junction_aa_light stringlengths 6 25 | junction_aa_length_light stringclasses 19
values | v_score_light stringclasses 164
values | d_score_light stringclasses 2
values | j_score_light stringclasses 31
values | v_cigar_light stringlengths 10 25 | d_cigar_light stringclasses 2
values | j_cigar_light stringlengths 7 16 | v_support_light stringlengths 5 23 | d_support_light stringclasses 2
values | j_support_light stringlengths 5 9 | v_identity_light stringlengths 4 6 | d_identity_light stringclasses 1
value | j_identity_light stringclasses 87
values | v_sequence_start_light stringclasses 300
values | v_sequence_end_light stringclasses 321
values | v_germline_start_light stringclasses 13
values | v_germline_end_light stringclasses 56
values | d_sequence_start_light stringclasses 2
values | d_sequence_end_light stringclasses 2
values | d_germline_start_light stringclasses 2
values | d_germline_end_light stringclasses 2
values | j_sequence_start_light stringclasses 453
values | j_sequence_end_light stringclasses 453
values | j_germline_start_light stringclasses 20
values | j_germline_end_light stringclasses 37
values | fwr1_start_light stringclasses 300
values | fwr1_end_light stringclasses 300
values | cdr1_start_light stringclasses 300
values | cdr1_end_light stringclasses 301
values | fwr2_start_light stringclasses 301
values | fwr2_end_light stringclasses 301
values | cdr2_start_light stringclasses 475
values | cdr2_end_light stringclasses 473
values | fwr3_start_light stringclasses 300
values | fwr3_end_light stringclasses 300
values | fwr4_start_light stringclasses 311
values | fwr4_end_light stringclasses 313
values | cdr3_start_light stringclasses 300
values | cdr3_end_light stringclasses 311
values | np1_light stringlengths 1 44 ⌀ | np1_length_light stringclasses 70
values | np2_light stringclasses 2
values | np2_length_light stringclasses 2
values | c_region_light stringlengths 1 516 ⌀ | Isotype_light stringclasses 2
values | Redundancy_light stringclasses 1
value | ANARCI_numbering_light stringlengths 920 1.61k | ANARCI_status_light stringclasses 128
values |
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1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAACAGCCATCGC-1_contig_2 | TGGGGGACTTTCTGAGAGTCCTGGACCTCCTGCACAAGAACATGAAACACCTGTGGTTCTTCCTCCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCTCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGTGGTGAATCTAGGGGGACCTGCCTTAGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-4*02 | IGHD2-21*01 | IGHJ4*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGTGGTGAATCTAGGGGGACCTGCCTTAGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGTGGTGANNNNNNNNNNNNNNNNNNNNNNCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARVVNLGGPALGYWGQGTLVTVSS | QVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARVVXXXXXXXXYWGQGTLVTVSS | 1 | 295 | 296.0 | 301.0 | 324 | 361 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCAR | TGGTGA | V | TGGTGA | V | CTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YWGQGTLVTVSS | CTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YWGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCT | QVQLQESGPGLVKPSGTLSLTCAVS | GGTGGCTCCATCAGCAGTAGTAACTGG | GGSISSSNW | TGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAA | WSWVRQPPGKGLEWIGE | ATCTATCATAGTGGGAGCACC | IYHSGST | AACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGTGGTGAATCTAGGGGGACCTGCCTTAGGCTAC | ARVVNLGGPALGY | TGTGCGAGAGTGGTGAATCTAGGGGGACCTGCCTTAGGCTACTGG | 45.0 | CARVVNLGGPALGYW | 15.0 | 461.479 | 12.223 | 73.749 | 98S295M137S1N | 393S12N6M131S10N | 421S10N38M71S | 7.425e-132 | 49.58 | 3.246e-17 | 100.0 | 100.0 | 100.0 | 99 | 393 | 1 | 295 | 394.0 | 399.0 | 13.0 | 18.0 | 422 | 459 | 11 | 48 | 99 | 173 | 174 | 200 | 201 | 251 | 252 | 272 | 273 | 386 | 426.0 | 458.0 | 387.0 | 425.0 | null | 0 | ATCTAGGGGGACCTGCCTTAGG | 22.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'G', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'A', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '35 ': 'S', '36 ': 'S', '37 ': 'N', '38 ': 'W'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'E'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'H', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'K', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'V', '108 ': 'V', '109 ': 'N', '110 ': 'L', '111 ': 'G', '112 ': 'G', '113 ': 'P', '114 ': 'A', '115 ': 'L', '116 ': 'G', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAACAGCCATCGC-1_contig_1 | AGAGCTCTGGAGAAGAGCTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-20*01 | null | IGKJ1*01 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKVEIK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKVEIK | 1 | 289 | null | null | 290 | 325 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | null | null | null | null | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPGTLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCAGCTAC | QSVSSSY | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAGTATGGTAGCTCACCTCGGACG | QQYGSSPRT | TGTCAGCAGTATGGTAGCTCACCTCGGACGTTC | 33.0 | CQQYGSSPRTF | 11.0 | 452.13 | null | 69.904 | 104S289M172S1N | null | 393S2N36M136S | 5.179e-129 | null | 4.98e-16 | 100.0 | null | 100.0 | 105 | 393 | 1 | 289 | null | null | null | null | 394 | 429 | 3 | 38 | 105 | 182 | 183 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 399.0 | 428.0 | 372.0 | 398.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'G', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'G', '109 ': 'S', '114 ': 'S', '115 ': 'P', '116 ': 'R', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAACAGGGAACGG-1_contig_2 | TGGGGGCTTTCTGAGAGTCATGGATCTCATGTGCAAGAAAATGAAGCACCTGTGGTTCTTCCTCCTGCTGGTGGCGGCTCCCAGATGGGTCCTGTCCCAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACGTGATAGTAACCCCGGGTCTTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGCACCCACCAAGGCTCCGGATGTGTTCCCCATCATATCAGGGTGCAGACACCCAAAGGATAACAGCCCTGTGGTCCTGGCATGCTTGATAACTGGGTACCACC | H | F | T | F | T | F | T | IGHV4-39*01 | IGHD3-22*01 | IGHJ6*02 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACGTGATAGTAACCCCGGGTCTTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACNTGATAGTANNNNNNNNNNNTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARRDSNPGSYYYGMDVWGQGTTVTVSS | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXDSXXXXYYYGMDVWGQGTTVTVSS | 1 | 298 | 300.0 | 307.0 | 319 | 372 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGAC | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGAC | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | TGATAGTA | DS | TGATAGTA | DS | TACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | TACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QLQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGCAGTAGTAGTTACTAC | GGSISSSSYY | TGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGT | WGWIRQPPGKGLEWIGS | ATCTATTATAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGACGTGATAGTAACCCCGGGTCTTACTACTACGGTATGGACGTC | ARRDSNPGSYYYGMDV | TGTGCGAGACGTGATAGTAACCCCGGGTCTTACTACTACGGTATGGACGTCTGG | 54.0 | CARRDSNPGSYYYGMDVW | 18.0 | 466.153 | 16.069 | 104.513 | 97S298M177S1N | 396S9N8M168S14N | 415S8N54M103S | 3.151e-133 | 3.728 | 1.9250000000000003e-26 | 100.0 | 100.0 | 100.0 | 98 | 395 | 1 | 298 | 397.0 | 404.0 | 10.0 | 17.0 | 416 | 469 | 9 | 62 | 98 | 172 | 173 | 202 | 203 | 253 | 254 | 274 | 275 | 388 | 437.0 | 469.0 | 389.0 | 436.0 | G | 1 | ACCCCGGGTCT | 11.0 | GCACCCACCAAGGCTCCGGATGTGTTCCCCATCATATCAGGGTGCAGACACCCAAAGGATAACAGCCCTGTGGTCCTGGCATGCTTGATAACTGGGTACCACC | IGHD | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'L', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'G', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'R', '108 ': 'D', '109 ': 'S', '110 ': 'N', '111 ': 'P', '111A': 'G', '112B': 'S', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAACAGGGAACGG-1_contig_1 | AGCTTCAGCTGTGGGTAGAGAAGACAGGACTCAGGACAATCTCCAGCATGGCCAGCTTCCCTCTCCTCCTCACCCTCCTCACTCACTGTGCAGGGTCCTGGGCCCAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGCCCTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-44*01 | null | IGLJ3*02 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGCCCTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTCCTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGPWVFGGGTKLTVL | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGPWVFGGGTKLTVL | 1 | 296 | null | null | 297 | 334 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGCCC | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGP | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTCC | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGP | null | null | null | null | TTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | TTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGC | QSVLTQPPSASGTPGQRVTISCSGS | AGCTCCAACATCGGAAGTAATACT | SSNIGSNT | GTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTAT | VNWYQQLPGTAPKLLIY | AGTAATAAT | SNN | CAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGT | QRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | GCAGCATGGGATGACAGCCTGAATGGCCCTTGGGTG | AAWDDSLNGPWV | TGTGCAGCATGGGATGACAGCCTGAATGGCCCTTGGGTGTTC | 42.0 | CAAWDDSLNGPWVF | 14.0 | 459.921 | null | 73.749 | 104S296M249S | null | 400S38M211S | 2.6900000000000004e-131 | null | 3.99e-17 | 99.662 | null | 100.0 | 105 | 400 | 1 | 296 | null | null | null | null | 401 | 438 | 1 | 38 | 105 | 179 | 180 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 408.0 | 437.0 | 372.0 | 407.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'A', '12 ': 'S', '13 ': 'G', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'S', '37 ': 'N', '38 ': 'T'}, 'fwl2': {'39 ': 'V', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'S', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'Q', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'A', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'A', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'D', '110 ': 'S', '112 ': 'L', '113 ': 'N', '114 ': 'G', '115 ': 'P', '116 ': 'W', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAACAGGTCATCT-1_contig_1 | TGGGGACTTTCTGAGAGTCCTGGACCTCCTGCACAAGAACATGAAACACCTGTGGTTCTTCCTCCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCTCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAAGGTGGCTATCCGAAATTAGGGGGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-4*02 | IGHD5-12*01 | IGHJ4*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAAGGTGGCTATCCGAAATTAGGGGGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGANNGTGGCTANNNNNNNNNNNNNNNTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARRWLSEIRGWGQGTLVTVSS | QVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARXWLXXXXXWGQGTLVTVSS | 1 | 294 | 297.0 | 303.0 | 319 | 352 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGA | QVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGA | QVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCAR | GTGGCTA | WL | GTGGCTA | WL | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WGQGTLVTVSS | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCT | QVQLQESGPGLVKPSGTLSLTCAVS | GGTGGCTCCATCAGCAGTAGTAACTGG | GGSISSSNW | TGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAA | WSWVRQPPGKGLEWIGE | ATCTATCATAGTGGGAGCACC | IYHSGST | AACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAAGGTGGCTATCCGAAATTAGGGGG | ARRWLSEIRG | TGTGCGAGAAGGTGGCTATCCGAAATTAGGGGGTGG | 36.0 | CARRWLSEIRGW | 12.0 | 459.921 | 14.146 | 66.059 | 97S294M129S2N | 393S9N7M120S7N | 415S14N34M71S | 2.1430000000000002e-131 | 12.83 | 6.577e-15 | 100.0 | 100.0 | 100.0 | 98 | 391 | 1 | 294 | 394.0 | 400.0 | 10.0 | 16.0 | 416 | 449 | 15 | 48 | 98 | 172 | 173 | 199 | 200 | 250 | 251 | 271 | 272 | 385 | 416.0 | 448.0 | 386.0 | 415.0 | AG | 2 | TCCGAAATTAGGGGG | 15.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'G', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'A', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '35 ': 'S', '36 ': 'S', '37 ': 'N', '38 ': 'W'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'E'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'H', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'K', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'R', '108 ': 'W', '109 ': 'L', '113 ': 'S', '114 ': 'E', '115 ': 'I', '116 ': 'R', '117 ': 'G'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAACAGGTCATCT-1_contig_2 | GGGGAGGAGTCAGTCCCAACCAGGACACAGCATGGACATGAGGGTCCCTGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCTCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCGCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-33*01 | null | IGKJ4*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCGCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCNNGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLALTFGGGTKVEIK | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLXLTFGGGTKVEIK | 1 | 282 | null | null | 285 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNL | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNL | null | null | null | null | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGT | DIQMTQSPSSLSASVGDRVTITCQAS | CAGGACATTAGCAACTAT | QDISNY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAC | LNWYQQKPGKAPKLLIY | GATGCATCC | DAS | AATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGT | NLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAACAGTATGATAATCTCGCGCTCACT | QQYDNLALT | TGTCAACAGTATGATAATCTCGCGCTCACTTTC | 33.0 | CQQYDNLALTF | 11.0 | 441.224 | null | 73.749 | 97S282M176S5N | null | 381S38M136S | 9.757e-126 | null | 3.402e-17 | 100.0 | null | 100.0 | 98 | 379 | 1 | 282 | null | null | null | null | 382 | 419 | 1 | 38 | 98 | 175 | 176 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 389.0 | 418.0 | 362.0 | 388.0 | GC | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'Q', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'D', '29 ': 'I', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'L', '68 ': 'E', '69 ': 'T', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'F', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'I', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'D', '109 ': 'N', '114 ': 'L', '115 ': 'A', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAACAGGTCGGAT-1_contig_2 | GAGCTCTGGGAGAGGAGCCCAGCACTAGAAGTCGGCGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAACTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTTAACTTCAGTCCCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCATGGGACTGGAGTGGGTGGCACATATATCCAATGATGGGAACAGGAACTACTATATAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACATGCTGTATCTGGAAATGAACAGCCTGAGGGCTGAAGACACGGCTATGTATTACTGTGTGAAAGAGATGGCTGACTTCTCCTTCGGTATGGACGGCTGGGGCCAAGGGACCACAGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30*18 | IGHD6-19*01 | IGHJ6*02 | CAGGTGCAACTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTTAACTTCAGTCCCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCATGGGACTGGAGTGGGTGGCACATATATCCAATGATGGGAACAGGAACTACTATATAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACATGCTGTATCTGGAAATGAACAGCCTGAGGGCTGAAGACACGGCTATGTATTACTGTGTGAAAGAGATGGCTGACTTCTCCTTCGGTATGGACGGCTGGGGCCAAGGGACCACAGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGANNTGGCTGACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVESGGGVVQPGRSLRLSCAASGFNFSPYGMHWVRQAPGMGLEWVAHISNDGNRNYYIDSVKGRFTISRDNSKNMLYLEMNSLRAEDTAMYYCVKEMADFSFGMDGWGQGTTVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXADYYYGMDVWGQGTTVTVSS | 1 | 296 | 299.0 | 304.0 | 305 | 360 | CAGGTGCAACTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTTAACTTCAGTCCCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCATGGGACTGGAGTGGGTGGCACATATATCCAATGATGGGAACAGGAACTACTATATAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACATGCTGTATCTGGAAATGAACAGCCTGAGGGCTGAAGACACGGCTATGTATTACTGTGTGAAAGA | QVQLVESGGGVVQPGRSLRLSCAASGFNFSPYGMHWVRQAPGMGLEWVAHISNDGNRNYYIDSVKGRFTISRDNSKNMLYLEMNSLRAEDTAMYYCVK | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | TGGCTG | A | TGGCTG | A | ACTTCTCCTTCGGTATGGACGGCTGGGGCCAAGGGACCACAGTCACCGTCTCCTCA | FSFGMDGWGQGTTVTVSS | ACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | CAGGTGCAACTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTTAACTTCAGTCCCTATGGC | GFNFSPYG | ATGCACTGGGTCCGCCAGGCTCCAGGCATGGGACTGGAGTGGGTGGCACAT | MHWVRQAPGMGLEWVAH | ATATCCAATGATGGGAACAGGAAC | ISNDGNRN | TACTATATAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACATGCTGTATCTGGAAATGAACAGCCTGAGGGCTGAAGACACGGCTATGTATTACTGT | YYIDSVKGRFTISRDNSKNMLYLEMNSLRAEDTAMYYC | TGGGGCCAAGGGACCACAGTCACCGTCTCCTCA | WGQGTTVTVSS | GTGAAAGAGATGGCTGACTTCTCCTTCGGTATGGACGGC | VKEMADFSFGMDG | TGTGTGAAAGAGATGGCTGACTTCTCCTTCGGTATGGACGGCTGG | 45.0 | CVKEMADFSFGMDGW | 15.0 | 385.132 | 12.223 | 79.518 | 137S296M136S | 435S11N6M128S4N | 441S6N56M72S | 7.692e-109 | 53.3 | 6.403e-19 | 91.554 | 100.0 | 91.071 | 138 | 433 | 1 | 296 | 436.0 | 441.0 | 12.0 | 17.0 | 442 | 497 | 7 | 62 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 465.0 | 497.0 | 426.0 | 464.0 | GA | 2 | null | 0.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'N', '30 ': 'F', '35 ': 'S', '36 ': 'P', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'M', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'H'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'N', '59 ': 'D', '62 ': 'G', '63 ': 'N', '64 ': 'R', '65 ': 'N'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'I', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'M', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'E', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'M', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'V', '106 ': 'K', '107 ': 'E', '108 ': 'M', '109 ': 'A', '110 ': 'D', '111 ': 'F', '112 ': 'S', '113 ': 'F', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'G'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAACAGGTCGGAT-1_contig_1 | GGAGAAGAGCTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGTCACCTTCTCCTGCAGGGCCAGTCAGAGTGTCAGCAGCACCTACTTAGCCTGGTACCAGCAGAAGCCTGGCCAGGCTCCCAGGCTCCTCATCCGTGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGCGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCCGTGTATTACTGTCAGCAGTATGGTAGCACACCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-20*01 | null | IGKJ2*01 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGTCACCTTCTCCTGCAGGGCCAGTCAGAGTGTCAGCAGCACCTACTTAGCCTGGTACCAGCAGAAGCCTGGCCAGGCTCCCAGGCTCCTCATCCGTGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGCGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCCGTGTATTACTGTCAGCAGTATGGTAGCACACCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | EIVLTQSPGTLSLSPGERVTFSCRASQSVSSTYLAWYQQKPGQAPRLLIRGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSTPYTFGQGTKLEIK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPYTFGQGTKLEIK | 1 | 287 | null | null | 288 | 325 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGTCACCTTCTCCTGCAGGGCCAGTCAGAGTGTCAGCAGCACCTACTTAGCCTGGTACCAGCAGAAGCCTGGCCAGGCTCCCAGGCTCCTCATCCGTGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGCGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCCGTGTATTACTGTCAGCAGTATGGTAGCACACC | EIVLTQSPGTLSLSPGERVTFSCRASQSVSSTYLAWYQQKPGQAPRLLIRGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSTP | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | null | null | null | null | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGTCACCTTCTCCTGCAGGGCCAGT | EIVLTQSPGTLSLSPGERVTFSCRAS | CAGAGTGTCAGCAGCACCTAC | QSVSSTY | TTAGCCTGGTACCAGCAGAAGCCTGGCCAGGCTCCCAGGCTCCTCATCCGT | LAWYQQKPGQAPRLLIR | GGTGCATCC | GAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGCGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCCGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAGCAGTATGGTAGCACACCGTACACT | QQYGSTPYT | TGTCAGCAGTATGGTAGCACACCGTACACTTTT | 33.0 | CQQYGSTPYTF | 11.0 | 417.852 | null | 73.749 | 96S287M174S3N | null | 383S1N38M136S | 1.063e-118 | null | 3.415e-17 | 96.516 | null | 100.0 | 97 | 383 | 1 | 287 | null | null | null | null | 384 | 421 | 2 | 39 | 97 | 174 | 175 | 195 | 196 | 246 | 247 | 255 | 256 | 363 | 391.0 | 420.0 | 364.0 | 390.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'G', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'F', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'T', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'R'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'G', '109 ': 'S', '114 ': 'T', '115 ': 'P', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAACCAAACCCAT-1_contig_2 | GAGCTCTGGGAGAGGAGCCCAGCACTAGAAGTCGGCGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTCGGTTTACGATTTTTGGAGTGGCCGATACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-33*01 | IGHD3-3*01 | IGHJ6*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTCGGTTTACGATTTTTGGAGTGGCCGATACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGANNNNNNTTACGATTTTTGGAGTGGNNNNTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDSVYDFWSGRYYYYGMDVWGQGTTVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXXXYDFWSGXYYYYGMDVWGQGTTVTVSS | 1 | 296 | 303.0 | 320.0 | 325 | 381 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | TTACGATTTTTGGAGTGG | YDFWSG | TTACGATTTTTGGAGTGG | YDFWSG | TACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | TACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGGC | GFTFSSYG | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATGGTATGATGGAAGTAATAAA | IWYDGSNK | TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGATTCGGTTTACGATTTTTGGAGTGGCCGATACTACTACTACGGTATGGACGTC | ARDSVYDFWSGRYYYYGMDV | TGTGCGAGAGATTCGGTTTACGATTTTTGGAGTGGCCGATACTACTACTACGGTATGGACGTCTGG | 66.0 | CARDSVYDFWSGRYYYYGMDVW | 22.0 | 463.037 | 35.296 | 110.281 | 137S296M157S | 439S3N18M133S10N | 461S5N57M72S | 2.807e-132 | 6.271e-06 | 3.646e-28 | 100.0 | 100.0 | 100.0 | 138 | 433 | 1 | 296 | 440.0 | 457.0 | 4.0 | 21.0 | 462 | 518 | 6 | 62 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 486.0 | 518.0 | 426.0 | 485.0 | TTCGGT | 6 | CCGA | 4.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'W', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'S', '109 ': 'V', '110 ': 'Y', '111 ': 'D', '111A': 'F', '111B': 'W', '111C': 'S', '112D': 'G', '112C': 'R', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAACCAAACCCAT-1_contig_1 | AGAGCTCTGGAGAAGAGCTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCGCCTATGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-20*01 | null | IGKJ2*01 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCGCCTATGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTNTGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPMYTFGQGTKLEIK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPXYTFGQGTKLEIK | 1 | 288 | null | null | 290 | 328 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCGCCT | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCT | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | null | null | null | null | TGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | TGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPGTLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCAGCTAC | QSVSSSY | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAGCAGTATGGTAGCTCGCCTATGTACACT | QQYGSSPMYT | TGTCAGCAGTATGGTAGCTCGCCTATGTACACTTTT | 36.0 | CQQYGSSPMYTF | 12.0 | 447.456 | null | 75.672 | 104S288M176S2N | null | 393S39M136S | 1.33e-127 | null | 9.188e-18 | 99.653 | null | 100.0 | 105 | 392 | 1 | 288 | null | null | null | null | 394 | 432 | 1 | 39 | 105 | 182 | 183 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 402.0 | 431.0 | 372.0 | 401.0 | A | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'G', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'G', '109 ': 'S', '113 ': 'S', '114 ': 'P', '115 ': 'M', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAACCAATCCGAT-1_contig_2 | AGGTCTCAGAGAGGAGCCTTAGCCCTGGACTCCAAGGCCTTTCCACTTGGTGATCAGCACTGAGCACAGAGGACTCACCATGGAATTGGGGCTGAGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGGCGTGATCGGGAGTGGCTGGCCAAAGGGGGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-7*01 | IGHD6-19*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGGCGTGATCGGGAGTGGCTGGCCAAAGGGGGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGNNNNNNNNNNNAGTGGCTGGNNNNNNNNNNNNACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARRDREWLAKGGYYFDYWGQGTLVTVSS | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAXXXXXWLXXXXXYFDYWGQGTLVTVSS | 1 | 293 | 305.0 | 313.0 | 326 | 373 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAG | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCA | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAG | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCA | AGTGGCTGG | WL | AGTGGCTGG | WL | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGTAGCTATTGG | GFTFSSYW | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAAC | MSWVRQAPGKGLEWVAN | ATAAAGCAAGATGGAAGTGAGAAA | IKQDGSEK | TACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGGCGTGATCGGGAGTGGCTGGCCAAAGGGGGTTACTACTTTGACTAC | ARRDREWLAKGGYYFDY | TGTGCGAGGCGTGATCGGGAGTGGCTGGCCAAAGGGGGTTACTACTTTGACTACTGG | 57.0 | CARRDREWLAKGGYYFDYW | 19.0 | 458.363 | 17.992 | 92.976 | 136S293M151S3N | 440S9N9M131S3N | 461S48M71S | 7.040000000000005e-131 | 0.9973 | 5.799e-23 | 100.0 | 100.0 | 100.0 | 137 | 429 | 1 | 293 | 441.0 | 449.0 | 10.0 | 18.0 | 462 | 509 | 1 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 476.0 | 508.0 | 425.0 | 475.0 | GCGTGATCGGG | 11 | CCAAAGGGGGTT | 12.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'W'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'N'}, 'cdrh2': {'56 ': 'I', '57 ': 'K', '58 ': 'Q', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'E', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'V', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'R', '108 ': 'D', '109 ': 'R', '110 ': 'E', '111 ': 'W', '111A': 'L', '111B': 'A', '112B': 'K', '112A': 'G', '112 ': 'G', '113 ': 'Y', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAACCAATCCGAT-1_contig_1 | CCTGGGTCAGAGCTCTGGAGAAGAGCTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCGGGAGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-20*01 | null | IGKJ1*01 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCGGGAGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCNNNNGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRETFGQGTKVEIK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPXXTFGQGTKVEIK | 1 | 289 | null | null | 294 | 328 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | null | null | null | null | GACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPGTLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCAGCTAC | QSVSSSY | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAGTATGGTAGCTCACCTCGGGAGACG | QQYGSSPRET | TGTCAGCAGTATGGTAGCTCACCTCGGGAGACGTTC | 36.0 | CQQYGSSPRETF | 12.0 | 452.13 | null | 67.981 | 112S289M175S1N | null | 405S3N35M136S | 5.255e-129 | null | 1.926e-15 | 100.0 | null | 100.0 | 113 | 401 | 1 | 289 | null | null | null | null | 406 | 440 | 4 | 38 | 113 | 190 | 191 | 211 | 212 | 262 | 263 | 271 | 272 | 379 | 410.0 | 439.0 | 380.0 | 409.0 | GGGA | 4 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'G', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'G', '109 ': 'S', '113 ': 'S', '114 ': 'P', '115 ': 'R', '116 ': 'E', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAACCACACATGT-1_contig_1 | TGGGGAGGGTCCTGCTCACATGGGAAATACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACACCTGTGGTTCTTCCTCCTGCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAACGCCGAATAGTAGTGGTTACATGAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-31*03 | IGHD3-22*01 | IGHJ5*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAACGCCGAATAGTAGTGGTTACATGAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGANNNNNNNATAGTAGTGGTTANNNNAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARTPNSSGYMNWFDPWGQGTLVTVSS | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXXSSGXXNWFDPWGQGTLVTVSS | 1 | 297 | 305.0 | 317.0 | 322 | 370 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | ATAGTAGTGGTTA | SSG | ATAGTAGTGGTTA | SSG | AACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | AACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSQTLSLTCTVS | GGTGGCTCCATCAGCAGTGGTGGTTACTAC | GGSISSGGYY | TGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTAC | WSWIRQHPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAACGCCGAATAGTAGTGGTTACATGAACTGGTTCGACCCC | ARTPNSSGYMNWFDP | TGTGCGAGAACGCCGAATAGTAGTGGTTACATGAACTGGTTCGACCCCTGG | 51.0 | CARTPNSSGYMNWFDPW | 17.0 | 464.595 | 25.682 | 94.899 | 120S297M144S2N | 424S11N13M124S7N | 441S2N49M71S | 9.091999999999999e-133 | 0.004666 | 1.479e-23 | 100.0 | 100.0 | 100.0 | 121 | 417 | 1 | 297 | 425.0 | 437.0 | 12.0 | 24.0 | 442 | 490 | 3 | 51 | 121 | 195 | 196 | 225 | 226 | 276 | 277 | 297 | 298 | 411 | 457.0 | 489.0 | 412.0 | 456.0 | ACGCCGA | 7 | CATG | 4.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'G', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'T', '108 ': 'P', '109 ': 'N', '110 ': 'S', '111 ': 'S', '111A': 'G', '112A': 'Y', '112 ': 'M', '113 ': 'N', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAACCACACATGT-1_contig_2 | AGTCTGGGCCTAAGGAAGCAGCACTGGTGGTGCCTCAGCCATGGCCTGGACCGTTCTCCTCCTCGGCCTCCTCTCTCACTGCACAGGCTCTGTGACCTCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-21*02 | null | IGLJ2*01 | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHVVFGGGTKLTVL | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHVVFGGGTKLTVL | 1 | 288 | null | null | 289 | 325 | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCAT | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDH | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCAT | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDH | null | null | null | null | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAAC | SYVLTQPPSVSVAPGQTARITCGGN | AACATTGGAAGTAAAAGT | NIGSKS | GTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTAT | VHWYQQKPGQAPVLVVY | GATGATAGC | DDS | GACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGT | DRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGGTGTGGGATAGTAGTAGTGATCATGTGGTA | QVWDSSSDHVV | TGTCAGGTGTGGGATAGTAGTAGTGATCATGTGGTATTC | 39.0 | CQVWDSSSDHVVF | 13.0 | 450.572 | null | 71.827 | 97S288M248S2N | null | 385S1N37M211S | 1.7090000000000002e-128 | null | 1.475e-16 | 100.0 | null | 100.0 | 98 | 385 | 1 | 288 | null | null | null | null | 386 | 422 | 2 | 38 | 98 | 172 | 173 | 190 | 191 | 241 | 242 | 250 | 251 | 358 | 392.0 | 421.0 | 359.0 | 391.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'A', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'G', '25 ': 'G', '26 ': 'N'}, 'cdrl1': {'27 ': 'N', '28 ': 'I', '29 ': 'G', '36 ': 'S', '37 ': 'K', '38 ': 'S'}, 'fwl2': {'39 ': 'V', '40 ': 'H', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'V', '55 ': 'Y'}, 'cdrl2': {'56 ': 'D', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'D', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'G', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'V', '107 ': 'W', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'S', '114 ': 'D', '115 ': 'H', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAACCAGGCGATA-1_contig_1 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATCATGCGTACGGGGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD4-17*01 | IGHJ3*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATCATGCGTACGGGGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGANNNNNNNTACGGNGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDHAYGDAFDIWGQGTMVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXXYGDAFDIWGQGTMVTVSS | 1 | 296 | 304.0 | 308.0 | 310 | 358 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | TACGG | YG | TACGG | YG | GATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | GATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGAAAGATCATGCGTACGGGGATGCTTTTGATATC | AKDHAYGDAFDI | TGTGCGAAAGATCATGCGTACGGGGATGCTTTTGATATCTGG | 42.0 | CAKDHAYGDAFDIW | 14.0 | 463.037 | 10.301 | 94.899 | 136S296M133S | 439S4N5M121S7N | 445S1N49M71S | 2.697e-132 | 200.6 | 1.4889999999999998e-23 | 100.0 | 100.0 | 100.0 | 137 | 432 | 1 | 296 | 440.0 | 444.0 | 5.0 | 9.0 | 446 | 494 | 2 | 50 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 461.0 | 493.0 | 425.0 | 460.0 | TCATGCG | 7 | G | 1.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'D', '108 ': 'H', '109 ': 'A', '110 ': 'Y', '112 ': 'G', '113 ': 'D', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAACCAGGCGATA-1_contig_2 | AGAGCTCTGGAGAAGAGCTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTCCTGGGGCACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-20*01 | null | IGKJ2*02 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTCCTGGGGCACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTNNNNNNGCACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQSWGTFGQGTKLEIK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQXXXTFGQGTKLEIK | 1 | 274 | null | null | 281 | 316 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGT | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQ | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGT | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQ | null | null | null | null | GCACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | TFGQGTKLEIK | GCACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | TFGQGTKLEIK | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPGTLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCAGCTAC | QSVSSSY | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAGCAGTCCTGGGGCACT | QQSWGT | TGTCAGCAGTCCTGGGGCACTTTT | 24.0 | CQQSWGTF | 8.0 | 428.759 | null | 69.904 | 104S274M178S16N | null | 384S2N36M136S | 5.526000000000001e-122 | null | 4.899e-16 | 100.0 | null | 100.0 | 105 | 378 | 1 | 274 | null | null | null | null | 385 | 420 | 3 | 38 | 105 | 182 | 183 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 390.0 | 419.0 | 372.0 | 389.0 | CCTGGG | 6 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'G', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '115 ': 'W', '116 ': 'G', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAACGTAATCGTC-1_contig_1 | AGCTCTGGGAGAGGAGCCCCAGCCTTGGGATTCCCAAGTGTTTTCATTCAGTGATCAGGACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGATTTTCCTTGCTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGACTTATACAGCTATGGTTACCCAGGGGTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-15*01 | IGHD5-18*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGACTTATACAGCTATGGTTACCCAGGGGTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGANNNATACAGCTATGGTTACNNNNNNNNCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTDLYSYGYPGVFDYWGQGTLVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTXXYSYGYXXXFDYWGQGTLVTVSS | 1 | 302 | 306.0 | 321.0 | 330 | 373 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | ATACAGCTATGGTTAC | YSYGY | ATACAGCTATGGTTAC | YSYGY | CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACTTTCAGTAACGCCTGG | GFTFSNAW | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGT | MSWVRQAPGKGLEWVGR | ATTAAAAGCAAAACTGATGGTGGGACAACA | IKSKTDGGTT | GACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGT | DYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | ACCACAGACTTATACAGCTATGGTTACCCAGGGGTCTTTGACTAC | TTDLYSYGYPGVFDY | TGTACCACAGACTTATACAGCTATGGTTACCCAGGGGTCTTTGACTACTGG | 51.0 | CTTDLYSYGYPGVFDYW | 17.0 | 472.386 | 31.45 | 85.286 | 137S302M142S | 442S4N16M123S | 466S4N44M71S | 4.2369999999999997e-135 | 8.874e-05 | 1.2e-20 | 100.0 | 100.0 | 100.0 | 138 | 439 | 1 | 302 | 443.0 | 458.0 | 5.0 | 20.0 | 467 | 510 | 5 | 48 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 317 | 318 | 431 | 477.0 | 509.0 | 432.0 | 476.0 | CTT | 3 | CCAGGGGT | 8.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'N', '37 ': 'A', '38 ': 'W'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'K', '58 ': 'S', '59 ': 'K', '60 ': 'T', '61 ': 'D', '62 ': 'G', '63 ': 'G', '64 ': 'T', '65 ': 'T'}, 'fwh3': {'66 ': 'D', '67 ': 'Y', '68 ': 'A', '69 ': 'A', '70 ': 'P', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'D', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'T', '106 ': 'T', '107 ': 'D', '108 ': 'L', '109 ': 'Y', '110 ': 'S', '111 ': 'Y', '111A': 'G', '112A': 'Y', '112 ': 'P', '113 ': 'G', '114 ': 'V', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAACGTAATCGTC-1_contig_2 | AGCTTCAGCTGTGGGTAGAGAAGACAGGACTCAGGACAATCTCCAGCATGGCCAGCTTCCCTCTCCTCCTCACCCTCCTCACTCACTGTGCAGGGTCCTGGGCCCAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTCCGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-44*01 | null | IGLJ3*02 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTCCGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTCCGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGPVFGGGTKLTVL | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGPVFGGGTKLTVL | 1 | 296 | null | null | 297 | 331 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTCC | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGP | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTCC | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGP | null | null | null | null | GGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGC | QSVLTQPPSASGTPGQRVTISCSGS | AGCTCCAACATCGGAAGTAATACT | SSNIGSNT | GTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTAT | VNWYQQLPGTAPKLLIY | AGTAATAAT | SNN | CAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGT | QRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | GCAGCATGGGATGACAGCCTGAATGGTCCGGTG | AAWDDSLNGPV | TGTGCAGCATGGGATGACAGCCTGAATGGTCCGGTGTTC | 39.0 | CAAWDDSLNGPVF | 13.0 | 463.037 | null | 67.981 | 104S296M246S | null | 400S3N35M211S | 3.087e-132 | null | 2.164e-15 | 100.0 | null | 100.0 | 105 | 400 | 1 | 296 | null | null | null | null | 401 | 435 | 4 | 38 | 105 | 179 | 180 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 405.0 | 434.0 | 372.0 | 404.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'A', '12 ': 'S', '13 ': 'G', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'S', '37 ': 'N', '38 ': 'T'}, 'fwl2': {'39 ': 'V', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'S', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'Q', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'A', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'A', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'D', '110 ': 'S', '113 ': 'L', '114 ': 'N', '115 ': 'G', '116 ': 'P', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAACGTCATATCG-1_contig_2 | GGGAGCATCACCCAGCAACCACATCTGTCCTCTAGAGAATCCCCTGAGAGCTCCGTTCCTCACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCCACAGGAGCCCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGGTAGCAGCAGCTGGTACGAGGAATACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-2*06 | IGHD6-13*01 | IGHJ1*01 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGGTAGCAGCAGCTGGTACGAGGAATACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGNTAGCAGCAGCTGGTACNNNGAATACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARGSSSWYEEYFQHWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARXSSSWYXEYFQHWGQGTLVTVSS | 1 | 295 | 297.0 | 312.0 | 316 | 364 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | TAGCAGCAGCTGGTAC | SSSWY | TAGCAGCAGCTGGTAC | SSSWY | GAATACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG | EYFQHWGQGTLVTVSS | GAATACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG | EYFQHWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCGGCTACTAT | GYTFTGYY | ATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGG | MHWVRQAPGQGLEWMGR | ATCAACCCTAACAGTGGTGGCACA | INPNSGGT | AACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYC | TGGGGCCAGGGCACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGGTAGCAGCAGCTGGTACGAGGAATACTTCCAGCAC | ARGSSSWYEEYFQH | TGTGCGAGAGGTAGCAGCAGCTGGTACGAGGAATACTTCCAGCACTGG | 48.0 | CARGSSSWYEEYFQHW | 16.0 | 461.479 | 31.45 | 94.899 | 121S295M140S1N | 417S5N16M123S | 436S3N49M71S | 7.810000000000001e-132 | 8.485e-05 | 1.465e-23 | 100.0 | 100.0 | 100.0 | 122 | 416 | 1 | 295 | 418.0 | 433.0 | 6.0 | 21.0 | 437 | 485 | 4 | 52 | 122 | 196 | 197 | 220 | 221 | 271 | 272 | 295 | 296 | 409 | 452.0 | 484.0 | 410.0 | 451.0 | G | 1 | GAG | 3.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'P', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'G', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'I', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'S', '109 ': 'S', '110 ': 'S', '111 ': 'W', '112A': 'Y', '112 ': 'E', '113 ': 'E', '114 ': 'Y', '115 ': 'F', '116 ': 'Q', '117 ': 'H'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAACGTCATATCG-1_contig_1 | AGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAAATGTGACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTTGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-5*03 | null | IGKJ2*01 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTTGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTTGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYLYTFGQGTKLEIK | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYLYTFGQGTKLEIK | 1 | 283 | null | null | 284 | 322 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATT | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSY | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATT | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSY | null | null | null | null | TGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | TGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQMTQSPSTLSASVGDRVTITCRAS | CAGAGTATTAGTAGCTGG | QSISSW | TTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | AAGGCGTCT | KAS | AGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGC | SLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAACAGTATAATAGTTATTTGTACACT | QQYNSYLYT | TGCCAACAGTATAATAGTTATTTGTACACTTTT | 33.0 | CQQYNSYLYTF | 11.0 | 442.782 | null | 75.672 | 93S283M175S4N | null | 376S39M136S | 3.288e-126 | null | 8.907e-18 | 100.0 | null | 100.0 | 94 | 376 | 1 | 283 | null | null | null | null | 377 | 415 | 1 | 39 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 385.0 | 414.0 | 358.0 | 384.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'W'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'K', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'D', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'S', '114 ': 'Y', '115 ': 'L', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAACGTCGAAAGC-1_contig_2 | AGTGCTTTCTGAGAGTCATGGACCTCCTGCACAAGAACATGAAACACCTGTGGTTCTTCCTCCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGAAGTCGGCCCGTATTACTATGATAGTAGTGGTTACCCCACGAGGTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-34*01 | IGHD3-22*01 | IGHJ6*02 | CAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGAAGTCGGCCCGTATTACTATGATAGTAGTGGTTACCCCACGAGGTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGNNNNNNNNNNGTATTACTATGATAGTAGTGGTTANNNNNNNNNNTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAREVGPYYYDSSGYPTRYYYYYGMDVWGQGTTVTVSS | QVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXXXYYYDSSGXXXXYYYYYGMDVWGQGTTVTVSS | 1 | 292 | 303.0 | 326.0 | 337 | 396 | CAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAG | QVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAG | QVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | GTATTACTATGATAGTAGTGGTTA | YYYDSSG | GTATTACTATGATAGTAGTGGTTA | YYYDSSG | TACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | TACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | CAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTAT | QVQLQQWGAGLLKPSETLSLTCAVY | GGTGGGTCCTTCAGTGGTTACTAC | GGSFSGYY | TGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAA | WSWIRQPPGKGLEWIGE | ATCAATCATAGTGGAAGCACC | INHSGST | AACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGAAGTCGGCCCGTATTACTATGATAGTAGTGGTTACCCCACGAGGTACTACTACTACTACGGTATGGACGTC | AREVGPYYYDSSGYPTRYYYYYGMDV | TGTGCGAGAGAAGTCGGCCCGTATTACTATGATAGTAGTGGTTACCCCACGAGGTACTACTACTACTACGGTATGGACGTCTGG | 84.0 | CAREVGPYYYDSSGYPTRYYYYYGMDVW | 28.0 | 456.805 | 46.832 | 116.049 | 95S292M176S1N | 397S24M142S7N | 431S2N60M72S | 2.021e-130 | 2.013e-09 | 6.379e-30 | 100.0 | 100.0 | 100.0 | 96 | 387 | 1 | 292 | 398.0 | 421.0 | 1.0 | 24.0 | 432 | 491 | 3 | 62 | 96 | 170 | 171 | 194 | 195 | 245 | 246 | 266 | 267 | 380 | 459.0 | 491.0 | 381.0 | 458.0 | AAGTCGGCCC | 10 | CCCCACGAGG | 10.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'Q', '7 ': 'W', '8 ': 'G', '9 ': 'A', '11 ': 'G', '12 ': 'L', '13 ': 'L', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'A', '25 ': 'V', '26 ': 'Y'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'F', '35 ': 'S', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'E'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'H', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'E', '108 ': 'V', '109 ': 'G', '110 ': 'P', '111 ': 'Y', '111A': 'Y', '111B': 'Y', '111C': 'D', '111D': 'S', '111E': 'S', '111F': 'G', '112G': 'Y', '112F': 'P', '112E': 'T', '112D': 'R', '112C': 'Y', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAACGTCGAAAGC-1_contig_1 | AGCTGTGGGCTCAGAAGCAGAGTTCTGGGGTGTCTCCACCATGGCCTGGACCCCTCTCTGGCTCACTCTCCTCACTCTTTGCATAGGTTCTGTGGTTTCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGACAGCCTCAGAAGCTATTATGCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTATGGTAAAAACAACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGTAACTCCCGGGACAGCAGTGGTAACCATTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-19*01 | null | IGLJ3*02 | TCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGACAGCCTCAGAAGCTATTATGCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTATGGTAAAAACAACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGTAACTCCCGGGACAGCAGTGGTAACCATTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGACAGCCTCAGAAGCTATTATGCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTATGGTAAAAACAACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGTAACTCCCGGGACAGCAGTGGTAACCATTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SSELTQDPAVSVALGQTVRITCQGDSLRSYYASWYQQKPGQAPVLVIYGKNNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDSSGNHWVFGGGTKLTVL | SSELTQDPAVSVALGQTVRITCQGDSLRSYYASWYQQKPGQAPVLVIYGKNNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDSSGNHWVFGGGTKLTVL | 1 | 288 | null | null | 289 | 325 | TCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGACAGCCTCAGAAGCTATTATGCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTATGGTAAAAACAACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGTAACTCCCGGGACAGCAGTGGTAACCAT | SSELTQDPAVSVALGQTVRITCQGDSLRSYYASWYQQKPGQAPVLVIYGKNNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDSSGNH | TCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGACAGCCTCAGAAGCTATTATGCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTATGGTAAAAACAACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGTAACTCCCGGGACAGCAGTGGTAACCAT | SSELTQDPAVSVALGQTVRITCQGDSLRSYYASWYQQKPGQAPVLVIYGKNNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDSSGNH | null | null | null | null | TGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | TGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | TCTTCTGAGCTGACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGGATCACATGCCAAGGAGAC | SSELTQDPAVSVALGQTVRITCQGD | AGCCTCAGAAGCTATTAT | SLRSYY | GCAAGCTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTGTCATCTAT | ASWYQQKPGQAPVLVIY | GGTAAAAAC | GKN | AACCGGCCCTCAGGGATCCCAGACCGATTCTCTGGCTCCAGCTCAGGAAACACAGCTTCCTTGACCATCACTGGGGCTCAGGCGGAAGATGAGGCTGACTATTACTGT | NRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | AACTCCCGGGACAGCAGTGGTAACCATTGGGTG | NSRDSSGNHWV | TGTAACTCCCGGGACAGCAGTGGTAACCATTGGGTGTTC | 39.0 | CNSRDSSGNHWVF | 13.0 | 450.572 | null | 71.827 | 97S288M248S2N | null | 385S1N37M211S | 1.7090000000000002e-128 | null | 1.475e-16 | 100.0 | null | 100.0 | 98 | 385 | 1 | 288 | null | null | null | null | 386 | 422 | 2 | 38 | 98 | 172 | 173 | 190 | 191 | 241 | 242 | 250 | 251 | 358 | 392.0 | 421.0 | 359.0 | 391.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'S', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'D', '8 ': 'P', '9 ': 'A', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'A', '15 ': 'L', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'V', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'Q', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'S', '28 ': 'L', '29 ': 'R', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'G', '57 ': 'K', '65 ': 'N'}, 'fwl3': {'66 ': 'N', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'S', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'T', '93 ': 'G', '94 ': 'A', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'N', '106 ': 'S', '107 ': 'R', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'G', '114 ': 'N', '115 ': 'H', '116 ': 'W', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAACGTCTGGAGA-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGTCTCATATTATGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD2-21*01 | IGHJ3*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGTCTCATATTATGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGNNNCATATTNTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKVSYYDAFDIWGQGTMVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXYXDAFDIWGQGTMVTVSS | 1 | 295 | 299.0 | 304.0 | 306 | 355 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | CATATT | Y | CATATT | Y | TGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | TGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGAAAGTCTCATATTATGATGCTTTTGATATC | AKVSYYDAFDI | TGTGCGAAAGTCTCATATTATGATGCTTTTGATATCTGG | 39.0 | CAKVSYYDAFDIW | 13.0 | 461.479 | 12.223 | 96.822 | 136S295M131S1N | 434S2N6M122S20N | 441S50M71S | 7.899e-132 | 52.63 | 3.907e-24 | 100.0 | 100.0 | 100.0 | 137 | 431 | 1 | 295 | 435.0 | 440.0 | 3.0 | 8.0 | 442 | 491 | 1 | 50 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 458.0 | 490.0 | 425.0 | 457.0 | TCT | 3 | A | 1.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'V', '108 ': 'S', '109 ': 'Y', '110 ': 'Y', '113 ': 'D', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAACGTCTGGAGA-1_contig_1 | AGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAAATGTGACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTTTTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-5*03 | null | IGKJ1*01 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTTTTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTNNTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYFWTFGQGTKVEIK | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYXWTFGQGTKVEIK | 1 | 283 | null | null | 286 | 322 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATT | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSY | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATT | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSY | null | null | null | null | TGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | TGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQMTQSPSTLSASVGDRVTITCRAS | CAGAGTATTAGTAGCTGG | QSISSW | TTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | AAGGCGTCT | KAS | AGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGC | SLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAACAGTATAATAGTTATTTTTGGACG | QQYNSYFWT | TGCCAACAGTATAATAGTTATTTTTGGACGTTC | 33.0 | CQQYNSYFWTF | 11.0 | 442.782 | null | 71.827 | 93S283M175S4N | null | 378S1N37M136S | 3.288e-126 | null | 1.28e-16 | 100.0 | null | 100.0 | 94 | 376 | 1 | 283 | null | null | null | null | 379 | 415 | 2 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 385.0 | 414.0 | 358.0 | 384.0 | TT | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'W'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'K', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'D', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'S', '114 ': 'Y', '115 ': 'F', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAACTCACCTCGT-1_contig_1 | CCACATCCCTCCTCAGAAGCCCCCAGAGCACAACTCCTTACCATGGACTGGACCTGGAGGATCCTCTTTTTGGTGGCAGCAGCCACAGGTGCCCACTCCCAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGGATCAACGCTGGCAATGGTAACACAAAATATTCACAGAAGTTCCAGGGCAGAGTCACCATTACCAGGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAAGACACGGCTGTGTATTACTGTGCGAGACTGGGCTATTGTAGTGGTGGTAGCTGCTCCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-3*01 | IGHD2-15*01 | IGHJ4*02 | CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGGATCAACGCTGGCAATGGTAACACAAAATATTCACAGAAGTTCCAGGGCAGAGTCACCATTACCAGGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAAGACACGGCTGTGTATTACTGTGCGAGACTGGGCTATTGTAGTGGTGGTAGCTGCTCCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGGATCAACGCTGGCAATGGTAACACAAAATATTCACAGAAGTTCCAGGGCAGAGTCACCATTACCAGGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAAGACACGGCTGTGTATTACTGTGCGAGANNNNNNTATTGTAGTGGTGGTAGCTGCTNNGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYCARLGYCSGGSCSDYWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYCARXXYCSGGSCXDYWGQGTLVTVSS | 1 | 294 | 301.0 | 322.0 | 325 | 364 | CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGGATCAACGCTGGCAATGGTAACACAAAATATTCACAGAAGTTCCAGGGCAGAGTCACCATTACCAGGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAAGACACGGCTGTGTATTACTGTGCGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYCAR | CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGGATCAACGCTGGCAATGGTAACACAAAATATTCACAGAAGTTCCAGGGCAGAGTCACCATTACCAGGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAAGACACGGCTGTGTATTACTGTGCGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYCAR | TATTGTAGTGGTGGTAGCTGCT | YCSGGSC | TATTGTAGTGGTGGTAGCTGCT | YCSGGSC | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACTAGCTATGCT | GYTFTSYA | ATGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGG | MHWVRQAPGQRLEWMGW | ATCAACGCTGGCAATGGTAACACA | INAGNGNT | AAATATTCACAGAAGTTCCAGGGCAGAGTCACCATTACCAGGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAAGACACGGCTGTGTATTACTGT | KYSQKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGACTGGGCTATTGTAGTGGTGGTAGCTGCTCCGACTAC | ARLGYCSGGSCSDY | TGTGCGAGACTGGGCTATTGTAGTGGTGGTAGCTGCTCCGACTACTGG | 48.0 | CARLGYCSGGSCSDYW | 16.0 | 459.921 | 42.986 | 77.595 | 99S294M141S2N | 399S4N22M113S5N | 423S8N40M71S | 2.2040000000000002e-131 | 2.742e-08 | 2.275e-18 | 100.0 | 100.0 | 100.0 | 100 | 393 | 1 | 294 | 400.0 | 421.0 | 5.0 | 26.0 | 424 | 463 | 9 | 48 | 100 | 174 | 175 | 198 | 199 | 249 | 250 | 273 | 274 | 387 | 430.0 | 462.0 | 388.0 | 429.0 | CTGGGC | 6 | CC | 2.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'R', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'A', '59 ': 'G', '62 ': 'N', '63 ': 'G', '64 ': 'N', '65 ': 'T'}, 'fwh3': {'66 ': 'K', '67 ': 'Y', '68 ': 'S', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'A', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'L', '108 ': 'G', '109 ': 'Y', '110 ': 'C', '111 ': 'S', '112A': 'G', '112 ': 'G', '113 ': 'S', '114 ': 'C', '115 ': 'S', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAACTCACCTCGT-1_contig_2 | TGGGGAGGAATCAGTCCCACTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTGCCAGGTGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTCGCCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-17*01 | null | IGKJ4*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTCGCCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTCNNCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKRLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQHNSYPRLTFGGGTKVEIK | DIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKRLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQHNSYPXLTFGGGTKVEIK | 1 | 286 | null | null | 289 | 325 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTC | DIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKRLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQHNSYP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGGGCATTAGAAATGATTTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAGCATAATAGTTACCCTC | DIQMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKRLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQHNSYP | null | null | null | null | CTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | CTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGGGCATTAGAAATGAT | QGIRND | TTAGGCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTAT | LGWYQQKPGKAPKRLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGT | SLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CTACAGCATAATAGTTACCCTCGCCTCACT | LQHNSYPRLT | TGTCTACAGCATAATAGTTACCCTCGCCTCACTTTC | 36.0 | CLQHNSYPRLTF | 12.0 | 447.456 | null | 71.827 | 98S286M175S1N | null | 386S1N37M136S | 1.307e-127 | null | 1.299e-16 | 100.0 | null | 100.0 | 99 | 384 | 1 | 286 | null | null | null | null | 387 | 423 | 2 | 38 | 99 | 176 | 177 | 194 | 195 | 245 | 246 | 254 | 255 | 362 | 393.0 | 422.0 | 363.0 | 392.0 | GC | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'R', '37 ': 'N', '38 ': 'D'}, 'fwk2': {'39 ': 'L', '40 ': 'G', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'R', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'L', '106 ': 'Q', '107 ': 'H', '108 ': 'N', '109 ': 'S', '113 ': 'Y', '114 ': 'P', '115 ': 'R', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAACTCATAACCG-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGTCCGAAAGTGGGAGCTTAACCCAATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD1-26*01 | IGHJ4*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGTCCGAAAGTGGGAGCTTAACCCAATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGNNNNNNAGTGGGAGCTNNNNNNNNTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKVRKWELNPIDYWGQGTLVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXXWELXXXDYWGQGTLVTVSS | 1 | 295 | 302.0 | 311.0 | 320 | 361 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | AGTGGGAGCT | WEL | AGTGGGAGCT | WEL | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAAAGTCCGAAAGTGGGAGCTTAACCCAATTGACTAC | AKVRKWELNPIDY | TGTGCGAAAGTCCGAAAGTGGGAGCTTAACCCAATTGACTACTGG | 45.0 | CAKVRKWELNPIDYW | 15.0 | 461.479 | 19.914 | 81.44 | 136S295M137S1N | 437S5N10M121S5N | 455S6N42M71S | 7.987000000000001e-132 | 0.2575 | 1.686e-19 | 100.0 | 100.0 | 100.0 | 137 | 431 | 1 | 295 | 438.0 | 447.0 | 6.0 | 15.0 | 456 | 497 | 7 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 464.0 | 496.0 | 425.0 | 463.0 | TCCGAA | 6 | TAACCCAA | 8.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'V', '108 ': 'R', '109 ': 'K', '110 ': 'W', '111 ': 'E', '112 ': 'L', '113 ': 'N', '114 ': 'P', '115 ': 'I', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAACTCATAACCG-1_contig_1 | AGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAAATGTGACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-5*03 | null | IGKJ5*01 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSITFGQGTRLEIK | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSITFGQGTRLEIK | 1 | 284 | null | null | 285 | 322 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYS | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYS | null | null | null | null | GATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | GATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQMTQSPSTLSASVGDRVTITCRAS | CAGAGTATTAGTAGCTGG | QSISSW | TTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | AAGGCGTCT | KAS | AGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGC | SLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYC | TTCGGCCAAGGGACACGACTGGAGATTAAA | FGQGTRLEIK | CAACAGTATAATAGTTATTCGATCACC | QQYNSYSIT | TGCCAACAGTATAATAGTTATTCGATCACCTTC | 33.0 | CQQYNSYSITF | 11.0 | 444.34 | null | 73.749 | 93S284M174S3N | null | 377S38M136S | 1.117e-126 | null | 3.377e-17 | 100.0 | null | 100.0 | 94 | 377 | 1 | 284 | null | null | null | null | 378 | 415 | 1 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 385.0 | 414.0 | 358.0 | 384.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'W'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'K', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'D', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'S', '114 ': 'Y', '115 ': 'S', '116 ': 'I', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'R', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAACTCATTTGGG-1_contig_1 | AGCTCTGGGAGAGGAGCCCCAGCCTTGGGATTCCCAAGTGTTTTCATTCAGTGATCAGGACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGATTTTCCTTGCTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGCTAGCGGTGGCCTTTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-15*01 | IGHD6-19*01 | IGHJ6*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGCTAGCGGTGGCCTTTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGNTAGCAGTGGCNNNTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTASGGLYYYYGMDVWGQGTTVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTXSSGXYYYYGMDVWGQGTTVTVSS | 1 | 301 | 303.0 | 312.0 | 316 | 372 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | TAGCGGTGGC | SGG | TAGCAGTGGC | SSG | TACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | TACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACTTTCAGTAACGCCTGG | GFTFSNAW | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGT | MSWVRQAPGKGLEWVGR | ATTAAAAGCAAAACTGATGGTGGGACAACA | IKSKTDGGTT | GACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGT | DYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | ACCACAGCTAGCGGTGGCCTTTACTACTACTACGGTATGGACGTC | TTASGGLYYYYGMDV | TGTACCACAGCTAGCGGTGGCCTTTACTACTACTACGGTATGGACGTCTGG | 51.0 | CTTASGGLYYYYGMDVW | 17.0 | 470.828 | 14.146 | 110.281 | 137S301M143S1N | 439S5N10M132S6N | 452S5N57M72S | 1.248e-134 | 14.36 | 3.59e-28 | 100.0 | 90.0 | 100.0 | 138 | 438 | 1 | 301 | 440.0 | 449.0 | 6.0 | 15.0 | 453 | 509 | 6 | 62 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 317 | 318 | 431 | 477.0 | 509.0 | 432.0 | 476.0 | C | 1 | CTT | 3.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'N', '37 ': 'A', '38 ': 'W'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'K', '58 ': 'S', '59 ': 'K', '60 ': 'T', '61 ': 'D', '62 ': 'G', '63 ': 'G', '64 ': 'T', '65 ': 'T'}, 'fwh3': {'66 ': 'D', '67 ': 'Y', '68 ': 'A', '69 ': 'A', '70 ': 'P', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'D', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'T', '106 ': 'T', '107 ': 'A', '108 ': 'S', '109 ': 'G', '110 ': 'G', '111 ': 'L', '111A': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAACTCATTTGGG-1_contig_2 | GGGAGAGCCCTGGGGAGGAACTGCTCAGTTAGGACCCAGAGGGAACCATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCCACTTTCGGCCCTGGGACCAAAGTGGATATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-11*01 | null | IGKJ3*01 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPTFGPGTKVDIK | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPTFGPGTKVDIK | 1 | 284 | null | null | 285 | 319 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWP | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWP | null | null | null | null | CACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | TFGPGTKVDIK | CACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | TFGPGTKVDIK | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPATLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCTAC | QSVSSY | TTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GATGCATCC | DAS | AACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGT | NRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYC | TTCGGCCCTGGGACCAAAGTGGATATCAAA | FGPGTKVDIK | CAGCAGCGTAGCAACTGGCCCACT | QQRSNWPT | TGTCAGCAGCGTAGCAACTGGCCCACTTTC | 30.0 | CQQRSNWPTF | 10.0 | 444.34 | null | 67.981 | 107S284M171S3N | null | 391S3N35M136S | 1.14e-126 | null | 1.878e-15 | 100.0 | null | 100.0 | 108 | 391 | 1 | 284 | null | null | null | null | 392 | 426 | 4 | 38 | 108 | 185 | 186 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 396.0 | 425.0 | 372.0 | 395.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'R', '108 ': 'S', '114 ': 'N', '115 ': 'W', '116 ': 'P', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'P', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'D', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAACTCCACGTTC-1_contig_1 | AGCTCTCAGAGAGGTGCCTTAGCCCTGGATTCCAAGGCATTTCCACTTGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTGGGGCTGTGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAAGTGGGAGCTACGAGGAGTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-48*03 | IGHD1-26*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAAGTGGGAGCTACGAGGAGTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAAGTGGGAGCTACNNNNNNNACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYEMNWVRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARSGSYEEYYFDYWGQGTLVTVSS | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYEMNWVRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARSGSYXXXYFDYWGQGTLVTVSS | 1 | 294 | 295.0 | 306.0 | 314 | 361 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYEMNWVRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYEMNWVRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | AGTGGGAGCTAC | SGSY | AGTGGGAGCTAC | SGSY | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGGSLRLSCAAS | GGATTCACCTTCAGTAGTTATGAA | GFTFSSYE | ATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATAC | MNWVRQAPGKGLEWVSY | ATTAGTAGTAGTGGTAGTACCATA | ISSSGSTI | TACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGT | YYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAAGTGGGAGCTACGAGGAGTACTACTTTGACTAC | ARSGSYEEYYFDY | TGTGCGAGAAGTGGGAGCTACGAGGAGTACTACTTTGACTACTGG | 45.0 | CARSGSYEEYYFDYW | 15.0 | 459.921 | 23.76 | 92.976 | 136S294M138S2N | 430S5N12M126S3N | 449S48M71S | 2.352e-131 | 0.01792 | 5.677e-23 | 100.0 | 100.0 | 100.0 | 137 | 430 | 1 | 294 | 431.0 | 442.0 | 6.0 | 17.0 | 450 | 497 | 1 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 464.0 | 496.0 | 425.0 | 463.0 | null | 0 | GAGGAGT | 7.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'E'}, 'fwh2': {'39 ': 'M', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'S', '59 ': 'S', '62 ': 'G', '63 ': 'S', '64 ': 'T', '65 ': 'I'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'S', '108 ': 'G', '109 ': 'S', '110 ': 'Y', '111 ': 'E', '112 ': 'E', '113 ': 'Y', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAACTCCACGTTC-1_contig_2 | ATCTCCTCCAGCAGCAGCCTCTGACTCTGCTGATTTGCATCATGGGCCGCTCTCTCCAGCAAGGGGATAAGAGAGGCCTGGGAGGAACCTGCTCAGTCTGGGCCTAAGGAAGCAGCACTGGTGGTGCCTCAGCCATGGCCTGGACCGTTCTCCTCCTCGGCCTCCTCTCTCACTGCACAGGCTCTGTGACCTCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCATCGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-21*02 | null | IGLJ3*02 | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCATCGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCATCGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHRVFGGGTKLTVL | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHRVFGGGTKLTVL | 1 | 289 | null | null | 290 | 325 | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCATC | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDH | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCATC | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDH | null | null | null | null | GGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAAC | SYVLTQPPSVSVAPGQTARITCGGN | AACATTGGAAGTAAAAGT | NIGSKS | GTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTAT | VHWYQQKPGQAPVLVVY | GATGATAGC | DDS | GACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGT | DRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGGTGTGGGATAGTAGTAGTGATCATCGGGTG | QVWDSSSDHRV | TGTCAGGTGTGGGATAGTAGTAGTGATCATCGGGTGTTC | 39.0 | CQVWDSSSDHRVF | 13.0 | 452.13 | null | 69.904 | 191S289M247S1N | null | 480S2N36M211S | 6.706e-129 | null | 6.436e-16 | 100.0 | null | 100.0 | 192 | 480 | 1 | 289 | null | null | null | null | 481 | 516 | 3 | 38 | 192 | 266 | 267 | 284 | 285 | 335 | 336 | 344 | 345 | 452 | 486.0 | 515.0 | 453.0 | 485.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'A', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'G', '25 ': 'G', '26 ': 'N'}, 'cdrl1': {'27 ': 'N', '28 ': 'I', '29 ': 'G', '36 ': 'S', '37 ': 'K', '38 ': 'S'}, 'fwl2': {'39 ': 'V', '40 ': 'H', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'V', '55 ': 'Y'}, 'cdrl2': {'56 ': 'D', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'D', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'G', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'V', '107 ': 'W', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'S', '114 ': 'D', '115 ': 'H', '116 ': 'R', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAACTCTTATCTG-1_contig_2 | AGCTCTGGGAGAGGAGCTCCAGCCTTGGGATTCCCAGCTGTCTCCACTCGGTGATCGGCACTGAATACAGGAGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTTGTTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCCGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGCTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGGAGTGGGTTGGCCGTATTAGAAGCAAAGCTAACAGTTACGCGACAGCATATGCTGCGTCGGTGAAAGGCAGGTTCACCATCTCCAGAGATGATTCAAAGAACACGGCGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTGTATTACTGTACTAGACTGCTATCGGGGCATTACTATGATAGTAGTGGTTATCCAAATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-73*02 | IGHD3-22*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCCGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGCTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGGAGTGGGTTGGCCGTATTAGAAGCAAAGCTAACAGTTACGCGACAGCATATGCTGCGTCGGTGAAAGGCAGGTTCACCATCTCCAGAGATGATTCAAAGAACACGGCGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTGTATTACTGTACTAGACTGCTATCGGGGCATTACTATGATAGTAGTGGTTATCCAAATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCCGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGCTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGGAGTGGGTTGGCCGTATTAGAAGCAAAGCTAACAGTTACGCGACAGCATATGCTGCGTCGGTGAAAGGCAGGTTCACCATCTCCAGAGATGATTCAAAGAACACGGCGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTGTATTACTGTACTAGACNNNNNNNNNNNNATTACTATGATAGTAGTGGTTATNNNNNTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVQPGGSLKLSCAASGFTFSGSAMHWVRQASGKGLEWVGRIRSKANSYATAYAASVKGRFTISRDDSKNTAYLQMNSLKTEDTAVYYCTRLLSGHYYDSSGYPNDYWGQGTLVTVSS | EVQLVESGGGLVQPGGSLKLSCAASGFTFSGSAMHWVRQASGKGLEWVGRIRSKANSYATAYAASVKGRFTISRDDSKNTAYLQMNSLKTEDTAVYYCTRXXXXXYYDSSGYXXDYWGQGTLVTVSS | 1 | 301 | 314.0 | 336.0 | 342 | 382 | GAGGTGCAGCTGGTGGAGTCCGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGCTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGGAGTGGGTTGGCCGTATTAGAAGCAAAGCTAACAGTTACGCGACAGCATATGCTGCGTCGGTGAAAGGCAGGTTCACCATCTCCAGAGATGATTCAAAGAACACGGCGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTGTATTACTGTACTAGAC | EVQLVESGGGLVQPGGSLKLSCAASGFTFSGSAMHWVRQASGKGLEWVGRIRSKANSYATAYAASVKGRFTISRDDSKNTAYLQMNSLKTEDTAVYYCTR | GAGGTGCAGCTGGTGGAGTCCGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAAACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGCTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGGAGTGGGTTGGCCGTATTAGAAGCAAAGCTAACAGTTACGCGACAGCATATGCTGCGTCGGTGAAAGGCAGGTTCACCATCTCCAGAGATGATTCAAAGAACACGGCGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTGTATTACTGTACTAGAC | EVQLVESGGGLVQPGGSLKLSCAASGFTFSGSAMHWVRQASGKGLEWVGRIRSKANSYATAYAASVKGRFTISRDDSKNTAYLQMNSLKTEDTAVYYCTR | ATTACTATGATAGTAGTGGTTAT | YYDSSGY | ATTACTATGATAGTAGTGGTTAT | YYDSSGY | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCCGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAAACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGGSLKLSCAAS | GGGTTCACCTTCAGTGGCTCTGCT | GFTFSGSA | ATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGGAGTGGGTTGGCCGT | MHWVRQASGKGLEWVGR | ATTAGAAGCAAAGCTAACAGTTACGCGACA | IRSKANSYAT | GCATATGCTGCGTCGGTGAAAGGCAGGTTCACCATCTCCAGAGATGATTCAAAGAACACGGCGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTGTATTACTGT | AYAASVKGRFTISRDDSKNTAYLQMNSLKTEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | ACTAGACTGCTATCGGGGCATTACTATGATAGTAGTGGTTATCCAAATGACTAC | TRLLSGHYYDSSGYPNDY | TGTACTAGACTGCTATCGGGGCATTACTATGATAGTAGTGGTTATCCAAATGACTACTGG | 60.0 | CTRLLSGHYYDSSGYPNDYW | 20.0 | 470.828 | 44.909 | 79.518 | 137S301M152S1N | 450S2N23M117S6N | 478S7N41M71S | 1.268e-134 | 8.005e-09 | 6.644e-19 | 100.0 | 100.0 | 100.0 | 138 | 438 | 1 | 301 | 451.0 | 473.0 | 3.0 | 25.0 | 479 | 519 | 8 | 48 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 317 | 318 | 431 | 486.0 | 518.0 | 432.0 | 485.0 | TGCTATCGGGGC | 12 | CCAAA | 5.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'K', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'G', '37 ': 'S', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'S', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'R', '58 ': 'S', '59 ': 'K', '60 ': 'A', '61 ': 'N', '62 ': 'S', '63 ': 'Y', '64 ': 'A', '65 ': 'T'}, 'fwh3': {'66 ': 'A', '67 ': 'Y', '68 ': 'A', '69 ': 'A', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'D', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'T', '106 ': 'R', '107 ': 'L', '108 ': 'L', '109 ': 'S', '110 ': 'G', '111 ': 'H', '111A': 'Y', '111B': 'Y', '112C': 'D', '112B': 'S', '112A': 'S', '112 ': 'G', '113 ': 'Y', '114 ': 'P', '115 ': 'N', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAACTCTTATCTG-1_contig_1 | CTGGGCCTCAGGAAGCAGCATCGGAGGTGCCTCAGCCATGGCATGGATCCCTCTCTTCCTCGGCGTCCTTGCTTACTGCACAGGTTCCGTGGCCTCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGCAGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAGGTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-1*01 | null | IGLJ1*01 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGCAGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGCAGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTAVFGTGTKVTVL | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTAVFGTGTKVTVL | 1 | 285 | null | null | 286 | 319 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGCA | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTA | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTGCA | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTA | null | null | null | null | GTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | VFGTGTKVTVL | GTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | VFGTGTKVTVL | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTASITCSGD | AAATTGGGGGATAAATAT | KLGDKY | GCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTAT | ACWYQQKPGQSPVLVIY | CAAGATAGC | QDS | AAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGT | KRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYC | TTCGGAACTGGGACCAAGGTCACCGTCCTA | FGTGTKVTVL | CAGGCGTGGGACAGCAGCACTGCAGTC | QAWDSSTAV | TGTCAGGCGTGGGACAGCAGCACTGCAGTCTTC | 33.0 | CQAWDSSTAVF | 11.0 | 445.898 | null | 66.059 | 94S285M245S | null | 379S4N34M211S | 4.298e-127 | null | 7.92e-15 | 100.0 | null | 100.0 | 95 | 379 | 1 | 285 | null | null | null | null | 380 | 413 | 5 | 38 | 95 | 169 | 170 | 187 | 188 | 238 | 239 | 247 | 248 | 355 | 383.0 | 412.0 | 356.0 | 382.0 | null | 0 | null | null | GTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'K', '28 ': 'L', '29 ': 'G', '36 ': 'D', '37 ': 'K', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'C', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'Q', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'T', '95 ': 'Q', '96 ': 'A', '97 ': 'M', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'S', '114 ': 'S', '115 ': 'T', '116 ': 'A', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'T', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAGTAGCAGGTCA-1_contig_1 | TGGGGAGGGTCCTGCTCACATGGGAAATACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACACCTGTGGTTCTTCCTCCTGCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATGTTGTGAGCAGCTCGCGGTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-31*03 | IGHD6-6*01 | IGHJ6*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATGTTGTGAGCAGCTCGCGGTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGANNNNNNNAGCAGCTCGNNNTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARDVVSSSRYYYYGMDVWGQGTTVTVSS | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXXSSSXYYYYGMDVWGQGTTVTVSS | 1 | 299 | 307.0 | 315.0 | 319 | 375 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | AGCAGCTCG | SSS | AGCAGCTCG | SSS | TACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | TACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSQTLSLTCTVS | GGTGGCTCCATCAGCAGTGGTGGTTACTAC | GGSISSGGYY | TGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTAC | WSWIRQHPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGATGTTGTGAGCAGCTCGCGGTACTACTACTACGGTATGGACGTC | ARDVVSSSRYYYYGMDV | TGTGCGAGAGATGTTGTGAGCAGCTCGCGGTACTACTACTACGGTATGGACGTCTGG | 57.0 | CARDVVSSSRYYYYGMDVW | 19.0 | 467.712 | 17.992 | 110.281 | 120S299M148S | 426S6N9M132S3N | 438S5N57M72S | 1.06e-133 | 0.9746 | 3.5020000000000003e-28 | 100.0 | 100.0 | 100.0 | 121 | 419 | 1 | 299 | 427.0 | 435.0 | 7.0 | 15.0 | 439 | 495 | 6 | 62 | 121 | 195 | 196 | 225 | 226 | 276 | 277 | 297 | 298 | 411 | 463.0 | 495.0 | 412.0 | 462.0 | TGTTGTG | 7 | CGG | 3.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'G', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'V', '109 ': 'V', '110 ': 'S', '111 ': 'S', '111A': 'S', '111B': 'R', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAGTAGCAGGTCA-1_contig_2 | GGGAGAGCCCTGGGGAGGAACTGCTCAGTTAGGACCCAGAGGGAACCATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-11*01 | null | IGKJ1*01 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPPWTFGQGTKVEIK | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPPWTFGQGTKVEIK | 1 | 287 | null | null | 288 | 325 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPP | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPP | null | null | null | null | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPATLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCTAC | QSVSSY | TTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GATGCATCC | DAS | AACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGT | NRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAGCGTAGCAACTGGCCTCCGTGGACG | QQRSNWPPWT | TGTCAGCAGCGTAGCAACTGGCCTCCGTGGACGTTC | 36.0 | CQQRSNWPPWTF | 12.0 | 449.014 | null | 73.749 | 107S287M174S | null | 394S38M136S | 4.515e-128 | null | 3.483e-17 | 100.0 | null | 100.0 | 108 | 394 | 1 | 287 | null | null | null | null | 395 | 432 | 1 | 38 | 108 | 185 | 186 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 402.0 | 431.0 | 372.0 | 401.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'R', '108 ': 'S', '109 ': 'N', '113 ': 'W', '114 ': 'P', '115 ': 'P', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAGTAGGGTTTCT-1_contig_2 | TGGGGACCCAAAAACCACACCCCTCCTTGGGAGAATCCCCTAGATCACAGCTCCTCACCATGGACTGGACCTGGAGCATCCTTTTCTTGGTGGCAGCAGCAACAGGTGCCCACTCCCAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAACCGCCCGGCGGGGGGTGGTGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-18*01 | IGHD2-21*01 | IGHJ4*02 | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAACCGCCCGGCGGGGGGTGGTGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGANNNNNNNNNNNNNNGGTGGTGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARTARRGVVDYWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARXXXXXVVDYWGQGTLVTVSS | 1 | 294 | 309.0 | 315.0 | 316 | 355 | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAR | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAR | GGTGGTG | VV | GGTGGTG | VV | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGTTACACCTTTACCAGCTATGGT | GYTFTSYG | ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGG | ISWVRQAPGQGLEWMGW | ATCAGCGCTTACAATGGTAACACA | ISAYNGNT | AACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAACCGCCCGGCGGGGGGTGGTGGACTAC | ARTARRGVVDY | TGTGCGAGAACCGCCCGGCGGGGGGTGGTGGACTACTGG | 39.0 | CARTARRGVVDYW | 13.0 | 459.921 | 14.146 | 77.595 | 116S294M132S2N | 424S10N7M111S11N | 431S8N40M71S | 2.2390000000000001e-131 | 13.38 | 2.31e-18 | 100.0 | 100.0 | 100.0 | 117 | 410 | 1 | 294 | 425.0 | 431.0 | 11.0 | 17.0 | 432 | 471 | 9 | 48 | 117 | 191 | 192 | 215 | 216 | 266 | 267 | 290 | 291 | 404 | 438.0 | 470.0 | 405.0 | 437.0 | ACCGCCCGGCGGGG | 14 | null | 0.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'I', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'A', '59 ': 'Y', '62 ': 'N', '63 ': 'G', '64 ': 'N', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'L', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'T', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'R', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'T', '108 ': 'A', '109 ': 'R', '110 ': 'R', '113 ': 'G', '114 ': 'V', '115 ': 'V', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAGTAGGGTTTCT-1_contig_1 | AGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAAATGTGACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-5*03 | null | IGKJ2*01 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTANNNGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYPYTFGQGTKLEIK | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSXXYTFGQGTKLEIK | 1 | 281 | null | null | 285 | 322 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTA | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNS | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTA | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNS | null | null | null | null | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQMTQSPSTLSASVGDRVTITCRAS | CAGAGTATTAGTAGCTGG | QSISSW | TTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | AAGGCGTCT | KAS | AGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGC | SLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAACAGTATAATAGTTACCCGTACACT | QQYNSYPYT | TGCCAACAGTATAATAGTTACCCGTACACTTTT | 33.0 | CQQYNSYPYTF | 11.0 | 439.666 | null | 73.749 | 93S281M177S6N | null | 377S1N38M136S | 2.851e-125 | null | 3.377e-17 | 100.0 | null | 100.0 | 94 | 374 | 1 | 281 | null | null | null | null | 378 | 415 | 2 | 39 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 385.0 | 414.0 | 358.0 | 384.0 | CCC | 3 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'W'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'K', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'D', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'S', '114 ': 'Y', '115 ': 'P', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAGTAGTACACCT-1_contig_1 | GGGAGAGGAGCCCAGCACTGGGATTCCGAGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTTGGCTGAGCTGGGTTTTCCTTGTTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGACATTGGGGGGACTCTAGATTACGATTTTTGGAGTGGCCATTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-53*01 | IGHD3-3*01 | IGHJ6*02 | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGACATTGGGGGGACTCTAGATTACGATTTTTGGAGTGGCCATTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGANNNNNNNNNNNNNNNNNATTACGATTTTTGGAGTGGNNNNTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDIGGTLDYDFWSGHYYYGMDVWGQGTTVTVSS | EVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXXXXXXXYDFWSGXYYYGMDVWGQGTTVTVSS | 1 | 293 | 311.0 | 329.0 | 334 | 387 | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGA | EVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGA | EVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | ATTACGATTTTTGGAGTGG | YDFWSG | ATTACGATTTTTGGAGTGG | YDFWSG | TACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | TACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | GAGGTGCAGCTGGTGGAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLIQPGGSLRLSCAAS | GGGTTCACCGTCAGTAGCAACTAC | GFTVSSNY | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTT | MSWVRQAPGKGLEWVSV | ATTTATAGCGGTGGTAGCACA | IYSGGST | TACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGACATTGGGGGGACTCTAGATTACGATTTTTGGAGTGGCCATTACTACTACGGTATGGACGTC | ARDIGGTLDYDFWSGHYYYGMDV | TGTGCGAGAGACATTGGGGGGACTCTAGATTACGATTTTTGGAGTGGCCATTACTACTACGGTATGGACGTCTGG | 75.0 | CARDIGGTLDYDFWSGHYYYGMDVW | 25.0 | 458.363 | 37.218 | 104.513 | 130S293M166S | 440S2N19M130S10N | 463S8N54M72S | 7.155e-131 | 1.651e-06 | 1.9840000000000002e-26 | 100.0 | 100.0 | 100.0 | 131 | 423 | 1 | 293 | 441.0 | 459.0 | 3.0 | 21.0 | 464 | 517 | 9 | 62 | 131 | 205 | 206 | 229 | 230 | 280 | 281 | 301 | 302 | 415 | 485.0 | 517.0 | 416.0 | 484.0 | CATTGGGGGGACTCTAG | 17 | CCAT | 4.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'I', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'V', '35 ': 'S', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'S', '59 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'I', '109 ': 'G', '110 ': 'G', '111 ': 'T', '111A': 'L', '111B': 'D', '111C': 'Y', '111D': 'D', '111E': 'F', '112E': 'W', '112D': 'S', '112C': 'G', '112B': 'H', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAGTAGTACACCT-1_contig_2 | GCTGGGGTCTCAGGAGGCAGCGCTCTCAGGACATCTCCACCATGGCCTGGGCTCTGCTGCTCCTCACCCTCCTCACTCAGGGCACAGGGTCCTGGGCCCAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTCTTGGGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV2-14*01 | null | IGLJ2*01 | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTCTTGGGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTCTNNNGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTLGVFGGGTKLTVL | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTLXVFGGGTKLTVL | 1 | 296 | null | null | 300 | 334 | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTCT | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTL | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTCT | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTL | null | null | null | null | GGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACC | QSALTQPASVSGSPGQSITISCTGT | AGCAGTGACGTTGGTGGTTATAACTAT | SSDVGGYNY | GTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTAT | VSWYQQHPGKAPKLMIY | GAGGTCAGT | EVS | AATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGC | NRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | AGCTCATATACAAGCAGCAGCACTCTTGGGGTA | SSYTSSSTLGV | TGCAGCTCATATACAAGCAGCAGCACTCTTGGGGTATTC | 39.0 | CSSYTSSSTLGVF | 13.0 | 463.037 | null | 67.981 | 98S296M249S1N | null | 397S3N35M211S | 3.072e-132 | null | 2.154e-15 | 100.0 | null | 100.0 | 99 | 394 | 1 | 296 | null | null | null | null | 398 | 432 | 4 | 38 | 99 | 173 | 174 | 200 | 201 | 251 | 252 | 260 | 261 | 368 | 402.0 | 431.0 | 369.0 | 401.0 | TGG | 3 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'A', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'A', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'G', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'S', '19 ': 'I', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'T'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'D', '30 ': 'V', '31 ': 'G', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'M', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'V', '65 ': 'S'}, 'fwl3': {'66 ': 'N', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'S', '74 ': 'N', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'S', '106 ': 'S', '107 ': 'Y', '108 ': 'T', '109 ': 'S', '110 ': 'S', '113 ': 'S', '114 ': 'T', '115 ': 'L', '116 ': 'G', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAGTAGTGAAGAG-1_contig_1 | ACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACATCTGTGGTTCTTCCTCCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGAGGGGTGGGAGCTACCCTGGGCTTATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-61*02 | IGHD1-26*01 | IGHJ3*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGAGGGGTGGGAGCTACCCTGGGCTTATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGANNNGTGGGAGCTACNNNNNNNNNATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAREGWELPWAYIWGQGTMVTVSS | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXWELXXXXIWGQGTMVTVSS | 1 | 299 | 303.0 | 313.0 | 323 | 361 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | GTGGGAGCTAC | WEL | GTGGGAGCTAC | WEL | ATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | IWGQGTMVTVSS | ATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | IWGQGTMVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSQTLSLTCTVS | GGTGGCTCCATCAGCAGTGGTAGTTACTAC | GGSISSGSYY | TGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGT | WSWIRQPAGKGLEWIGR | ATCTATACCAGTGGGAGCACC | IYTSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGAGAGAGGGGTGGGAGCTACCCTGGGCTTATATC | AREGWELPWAYI | TGTGCGAGAGAGGGGTGGGAGCTACCCTGGGCTTATATCTGG | 42.0 | CAREGWELPWAYIW | 14.0 | 467.712 | 21.837 | 75.672 | 92S299M133S | 394S6N11M119S3N | 414S11N39M71S | 9.757e-134 | 0.06257 | 8.462e-18 | 100.0 | 100.0 | 100.0 | 93 | 391 | 1 | 299 | 395.0 | 405.0 | 7.0 | 17.0 | 415 | 453 | 12 | 50 | 93 | 167 | 168 | 197 | 198 | 248 | 249 | 269 | 270 | 383 | 420.0 | 452.0 | 384.0 | 419.0 | GGG | 3 | CCTGGGCTT | 9.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'G', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'A', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'T', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'E', '108 ': 'G', '109 ': 'W', '110 ': 'E', '112 ': 'L', '113 ': 'P', '114 ': 'W', '115 ': 'A', '116 ': 'Y', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAGTAGTGAAGAG-1_contig_2 | AGAGCTCTGGAGAAGAGCTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTAAGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-20*01 | null | IGKJ1*01 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTAAGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTNNGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPKTFGQGTKVEIK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPXTFGQGTKVEIK | 1 | 288 | null | null | 291 | 325 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCT | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCT | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | null | null | null | null | GACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPGTLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCAGCTAC | QSVSSSY | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAGTATGGTAGCTCACCTAAGACG | QQYGSSPKT | TGTCAGCAGTATGGTAGCTCACCTAAGACGTTC | 33.0 | CQQYGSSPKTF | 11.0 | 450.572 | null | 67.981 | 104S288M173S2N | null | 394S3N35M136S | 1.5250000000000002e-128 | null | 1.888e-15 | 100.0 | null | 100.0 | 105 | 392 | 1 | 288 | null | null | null | null | 395 | 429 | 4 | 38 | 105 | 182 | 183 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 399.0 | 428.0 | 372.0 | 398.0 | AA | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'G', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'G', '109 ': 'S', '114 ': 'S', '115 ': 'P', '116 ': 'K', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAGTAGTGTACTC-1_contig_1 | ATACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACATCTGTGGTTCTTCCTTCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCTCAGGACTAGCTTGGCCCCTGGCTACCCCGCCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-59*01 | IGHD5-12*01 | IGHJ6*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCTCAGGACTAGCTTGGCCCCTGGCTACCCCGCCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGANNNNNNNNNNNNNNNNNNNNNTGGCTACNNNNNCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARDLRTSLAPGYPAYYYYGMDVWGQGTTVTVSS | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXXXXXXXGYXXYYYYGMDVWGQGTTVTVSS | 1 | 293 | 315.0 | 321.0 | 327 | 384 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | TGGCTAC | GY | TGGCTAC | GY | CTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGTAGTTACTAC | GGSISSYY | TGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTAT | WSWIRQPPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGATCTCAGGACTAGCTTGGCCCCTGGCTACCCCGCCTACTACTACTACGGTATGGACGTC | ARDLRTSLAPGYPAYYYYGMDV | TGTGCGAGAGATCTCAGGACTAGCTTGGCCCCTGGCTACCCCGCCTACTACTACTACGGTATGGACGTCTGG | 72.0 | CARDLRTSLAPGYPAYYYYGMDVW | 24.0 | 458.363 | 14.146 | 112.203 | 94S293M163S | 408S10N7M135S6N | 420S4N58M72S | 6.695e-131 | 13.58 | 8.952999999999995e-29 | 100.0 | 100.0 | 100.0 | 95 | 387 | 1 | 293 | 409.0 | 415.0 | 11.0 | 17.0 | 421 | 478 | 5 | 62 | 95 | 169 | 170 | 193 | 194 | 244 | 245 | 265 | 266 | 379 | 446.0 | 478.0 | 380.0 | 445.0 | TCTCAGGACTAGCTTGGCCCC | 21 | CCCGC | 5.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'L', '109 ': 'R', '110 ': 'T', '111 ': 'S', '111A': 'L', '111B': 'A', '111C': 'P', '111D': 'G', '112E': 'Y', '112D': 'P', '112C': 'A', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAGTAGTGTACTC-1_contig_2 | TGGGGGATCAGGACTCCTCAGTTCACCTTCTCACAATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCTCTGGATCCAGTGGGGATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTTCGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV2-28*01 | null | IGKJ5*01 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTTCGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTNNGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTSITFGQGTRLEIK | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTXITFGQGTRLEIK | 1 | 297 | null | null | 300 | 337 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACT | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQT | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACT | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQT | null | null | null | null | GATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | GATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGT | DIVMTQSPLSLPVTPGEPASISCRSS | CAGAGCCTCCTGCATAGTAATGGATACAACTAT | QSLLHSNGYNY | TTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTAT | LDWYLQKPGQSPQLLIY | TTGGGTTCT | LGS | AATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGC | NRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYC | TTCGGCCAAGGGACACGACTGGAGATTAAA | FGQGTRLEIK | ATGCAAGCTCTACAAACTTCGATCACC | MQALQTSIT | TGCATGCAAGCTCTACAAACTTCGATCACCTTC | 33.0 | CMQALQTSITF | 11.0 | 464.595 | null | 73.749 | 95S297M176S5N | null | 394S38M136S | 9.210999999999999e-133 | null | 3.483e-17 | 100.0 | null | 100.0 | 96 | 392 | 1 | 297 | null | null | null | null | 395 | 432 | 1 | 38 | 96 | 173 | 174 | 206 | 207 | 257 | 258 | 266 | 267 | 374 | 402.0 | 431.0 | 375.0 | 401.0 | TC | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'L', '10 ': 'S', '11 ': 'L', '12 ': 'P', '13 ': 'V', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'P', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'L', '30 ': 'L', '31 ': 'H', '32 ': 'S', '34 ': 'N', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'D', '41 ': 'W', '42 ': 'Y', '43 ': 'L', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'Q', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'L', '57 ': 'G', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'K', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'G', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'M', '106 ': 'Q', '107 ': 'A', '108 ': 'L', '109 ': 'Q', '114 ': 'T', '115 ': 'S', '116 ': 'I', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'R', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAGTAGTTAGCGG-1_contig_2 | AGCTCTGGGAGAAGAGCCCCAGCCCCAGAATTCCCAGGAGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTTGTTGCTATTATAAAAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCAAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGACGGAGCTATGGTTACTATCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-11*01 | IGHD5-18*01 | IGHJ4*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCAAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGACGGAGCTATGGTTACTATCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCAAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGANNNAGCTATGGTTACNNNNTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVESGGGLVKPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARRSYGYYLDYWGQGTLVTVSS | QVQLVESGGGLVKPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARXSYGYXXDYWGQGTLVTVSS | 1 | 294 | 298.0 | 309.0 | 314 | 355 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCAAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGA | QVQLVESGGGLVKPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCAAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGA | QVQLVESGGGLVKPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | AGCTATGGTTAC | SYGY | AGCTATGGTTAC | SYGY | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCAAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACCTTCAGTGACTACTAC | GFTFSDYY | ATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATAC | MSWIRQAPGKGLEWVSY | ATTAGTAGTAGTGGTAGTACCATA | ISSSGSTI | TACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGT | YYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGACGGAGCTATGGTTACTATCTTGACTAC | ARRSYGYYLDY | TGTGCGAGACGGAGCTATGGTTACTATCTTGACTACTGG | 39.0 | CARRSYGYYLDYW | 13.0 | 459.921 | 23.76 | 81.44 | 137S294M132S2N | 434S8N12M117S | 450S6N42M71S | 2.33e-131 | 0.01776 | 1.671e-19 | 100.0 | 100.0 | 100.0 | 138 | 431 | 1 | 294 | 435.0 | 446.0 | 9.0 | 20.0 | 451 | 492 | 7 | 48 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 459.0 | 491.0 | 426.0 | 458.0 | CGG | 3 | TATC | 4.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'D', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'S', '59 ': 'S', '62 ': 'G', '63 ': 'S', '64 ': 'T', '65 ': 'I'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'R', '108 ': 'S', '109 ': 'Y', '110 ': 'G', '113 ': 'Y', '114 ': 'Y', '115 ': 'L', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAGTAGTTAGCGG-1_contig_1 | GCATGTCCCTCCCAGCTGCCCTACCTTCCAGAGCCCATATCAATGCCTGGGTCAGAGCTCTGGGGAGGAACTGCTCAGTTAGGACCCAGACGGAACCATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACTGGAGAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-15*01 | null | IGKJ1*01 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPTFGQGTKVEIK | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPTFGQGTKVEIK | 1 | 284 | null | null | 285 | 319 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWP | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWP | null | null | null | null | GACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVMTQSPATLSVSPGERATLSCRAS | CAGAGTGTTAGCAGCAAC | QSVSSN | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | ACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGT | TRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAGTATAATAACTGGCCGACG | QQYNNWPT | TGTCAGCAGTATAATAACTGGCCGACGTTC | 30.0 | CQQYNNWPTF | 10.0 | 444.34 | null | 67.981 | 157S284M171S3N | null | 441S3N35M136S | 1.2399999999999999e-126 | null | 2.048e-15 | 100.0 | null | 100.0 | 158 | 441 | 1 | 284 | null | null | null | null | 442 | 476 | 4 | 38 | 158 | 235 | 236 | 253 | 254 | 304 | 305 | 313 | 314 | 421 | 446.0 | 475.0 | 422.0 | 445.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'N'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '114 ': 'N', '115 ': 'W', '116 ': 'P', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAGTAGTTTCCTT-1_contig_1 | GAGCTCTGGGAGAGGAGCCCAGCACTAGAAGTCGGCGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATATAACAAGAGATGGCTACATCACGGGGTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-33*01 | IGHD5-12*01 | IGHJ5*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATATAACAAGAGATGGCTACATCACGGGGTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGANNNNNNNNNNNNTGGCTACNNNNNNNNNTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDITRDGYITGWFDPWGQGTLVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXXXXXGYXXXWFDPWGQGTLVTVSS | 1 | 296 | 309.0 | 315.0 | 325 | 370 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | TGGCTAC | GY | TGGCTAC | GY | TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGGC | GFTFSSYG | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATGGTATGATGGAAGTAATAAA | IWYDGSNK | TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGATATAACAAGAGATGGCTACATCACGGGGTGGTTCGACCCC | ARDITRDGYITGWFDP | TGTGCGAGAGATATAACAAGAGATGGCTACATCACGGGGTGGTTCGACCCCTGG | 54.0 | CARDITRDGYITGWFDPW | 18.0 | 463.037 | 14.146 | 89.131 | 137S296M145S | 445S10N7M126S6N | 461S5N46M71S | 2.7470000000000002e-132 | 14.29 | 8.306999999999999e-22 | 100.0 | 100.0 | 100.0 | 138 | 433 | 1 | 296 | 446.0 | 452.0 | 11.0 | 17.0 | 462 | 507 | 6 | 51 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 474.0 | 506.0 | 426.0 | 473.0 | TATAACAAGAGA | 12 | ATCACGGGG | 9.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'W', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'I', '109 ': 'T', '110 ': 'R', '111 ': 'D', '111A': 'G', '112B': 'Y', '112A': 'I', '112 ': 'T', '113 ': 'G', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAGTAGTTTCCTT-1_contig_2 | GCTGGGGTCTCAGGAGGCAGCGCTCTCAGGACATCTCCACCATGGCCTGGGCTCTGCTGCTCCTCACCCTCCTCACTCAGGGCACAGGGTCCTGGGCCCAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCCTTTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAGGTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV2-14*01 | null | IGLJ1*01 | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCCTTTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCNNTTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSLYVFGTGTKVTVL | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSXYVFGTGTKVTVL | 1 | 291 | null | null | 294 | 331 | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGC | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSS | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGC | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSS | null | null | null | null | TTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | YVFGTGTKVTVL | TTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | YVFGTGTKVTVL | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACC | QSALTQPASVSGSPGQSITISCTGT | AGCAGTGACGTTGGTGGTTATAACTAT | SSDVGGYNY | GTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTAT | VSWYQQHPGKAPKLMIY | GAGGTCAGT | EVS | AATCGGCCCTCAGGGGTCCCTGATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGC | NRPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYC | TTCGGAACTGGGACCAAGGTCACCGTCCTA | FGTGTKVTVL | AGCTCATATACAAGCAGCAGCCTTTATGTC | SSYTSSSLYV | TGCAGCTCATATACAAGCAGCAGCCTTTATGTCTTC | 36.0 | CSSYTSSSLYVF | 12.0 | 445.898 | null | 73.749 | 98S291M251S6N | null | 391S38M211S | 4.413e-127 | null | 3.934e-17 | 98.969 | null | 100.0 | 99 | 389 | 1 | 291 | null | null | null | null | 392 | 429 | 1 | 38 | 99 | 173 | 174 | 200 | 201 | 251 | 252 | 260 | 261 | 368 | 399.0 | 428.0 | 369.0 | 398.0 | CT | 2 | null | null | GTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'A', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'A', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'G', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'S', '19 ': 'I', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'T'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'D', '30 ': 'V', '31 ': 'G', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'M', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'V', '65 ': 'S'}, 'fwl3': {'66 ': 'N', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'S', '106 ': 'S', '107 ': 'Y', '108 ': 'T', '109 ': 'S', '113 ': 'S', '114 ': 'S', '115 ': 'L', '116 ': 'Y', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'T', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAGTCACAACGTT-1_contig_1 | GGGGAGGGTCCTGCTCACATGGGAAATACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACACCTGTGGTTCTTCCTCCTGCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGCGGACGGTGACGCAAAGGGGGCGCAGAAATGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-30-4*01 | IGHD4-17*01 | IGHJ4*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGCGGACGGTGACGCAAAGGGGGCGCAGAAATGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGNNNACGGTGACNNNNNNNNNNNNNNNNNNTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARADGDAKGAQKWGQGTLVTVSS | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXGDXXXXXXWGQGTLVTVSS | 1 | 298 | 302.0 | 309.0 | 328 | 361 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | ACGGTGAC | GD | ACGGTGAC | GD | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WGQGTLVTVSS | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSQTLSLTCTVS | GGTGGCTCCATCAGCAGTGGTGATTACTAC | GGSISSGDYY | TGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTAC | WSWIRQPPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCCAGAGCGGACGGTGACGCAAAGGGGGCGCAGAAA | ARADGDAKGAQK | TGTGCCAGAGCGGACGGTGACGCAAAGGGGGCGCAGAAATGG | 42.0 | CARADGDAKGAQKW | 14.0 | 466.153 | 16.069 | 66.059 | 119S298M134S1N | 420S5N8M123S3N | 446S14N34M71S | 3.0300000000000003e-133 | 3.589 | 6.977e-15 | 100.0 | 100.0 | 100.0 | 120 | 417 | 1 | 298 | 421.0 | 428.0 | 6.0 | 13.0 | 447 | 480 | 15 | 48 | 120 | 194 | 195 | 224 | 225 | 275 | 276 | 296 | 297 | 410 | 447.0 | 479.0 | 411.0 | 446.0 | CGG | 3 | GCAAAGGGGGCGCAGAAA | 18.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'G', '36 ': 'D', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'A', '108 ': 'D', '109 ': 'G', '110 ': 'D', '112 ': 'A', '113 ': 'K', '114 ': 'G', '115 ': 'A', '116 ': 'Q', '117 ': 'K'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAGTCACAACGTT-1_contig_2 | CCATCTGGGGGAGTCAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACTACGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ1*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACTACGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACNNNGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTTWTFGQGTKVEIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTXWTFGQGTKVEIK | 1 | 281 | null | null | 285 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYST | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYST | null | null | null | null | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAACAGAGTTACAGTACTACGTGGACG | QQSYSTTWT | TGTCAACAGAGTTACAGTACTACGTGGACGTTC | 33.0 | CQQSYSTTWTF | 11.0 | 439.666 | null | 73.749 | 101S281M177S6N | null | 385S38M136S | 2.895e-125 | null | 3.427e-17 | 100.0 | null | 100.0 | 102 | 382 | 1 | 281 | null | null | null | null | 386 | 423 | 1 | 38 | 102 | 179 | 180 | 197 | 198 | 248 | 249 | 257 | 258 | 365 | 393.0 | 422.0 | 366.0 | 392.0 | TAC | 3 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'T', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAGTCACGTTGGC-1_contig_1 | TGGGAGTGACTCCTGTGCCCCACCATGGACACACTTTGCTCCACGCTCCTGCTGCTGACCATCCCTTCATGGGTCTTGTCCCAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACGGGGGTGGGCCGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV2-5*02 | IGHD1-26*01 | IGHJ4*02 | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACGGGGGTGGGCCGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACNNNNGTGGGNNNGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAHGGGPDYWGQGTLVTVSS | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAHXXGXDYWGQGTLVTVSS | 1 | 297 | 302.0 | 306.0 | 310 | 349 | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACAC | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAH | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACAC | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAH | GTGGG | G | GTGGG | G | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCT | QITLKESGPTLVKPTQTLTLTCTFS | GGGTTCTCACTCAGCACTAGTGGAGTGGGT | GFSLSTSGVG | GTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTC | VGWIRQPPGKALEWLAL | ATTTATTGGGATGATGATAAG | IYWDDDK | CGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGT | RYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCACACGGGGGTGGGCCGGACTAC | AHGGGPDY | TGTGCACACGGGGGTGGGCCGGACTACTGG | 30.0 | CAHGGGPDYW | 10.0 | 464.595 | 10.301 | 77.595 | 81S297M123S4N | 382S6N5M114S9N | 390S8N40M71S | 8.068e-133 | 177.5 | 2.132e-18 | 100.0 | 100.0 | 100.0 | 82 | 378 | 1 | 297 | 383.0 | 387.0 | 7.0 | 11.0 | 391 | 430 | 9 | 48 | 82 | 156 | 157 | 186 | 187 | 237 | 238 | 258 | 259 | 372 | 397.0 | 429.0 | 373.0 | 396.0 | GGGG | 4 | CCG | 3.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'I', '3 ': 'T', '4 ': 'L', '5 ': 'K', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'T', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'T', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'T', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'F', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'S', '30 ': 'L', '31 ': 'S', '34 ': 'T', '35 ': 'S', '36 ': 'G', '37 ': 'V', '38 ': 'G'}, 'fwh2': {'39 ': 'V', '40 ': 'G', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'L', '54 ': 'A', '55 ': 'L'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'W', '59 ': 'D', '63 ': 'D', '64 ': 'D', '65 ': 'K'}, 'fwh3': {'66 ': 'R', '67 ': 'Y', '68 ': 'S', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'L', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'K', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'V', '88 ': 'V', '89 ': 'L', '90 ': 'T', '91 ': 'M', '92 ': 'T', '93 ': 'N', '94 ': 'M', '95 ': 'D', '96 ': 'P', '97 ': 'V', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'H', '107 ': 'G', '108 ': 'G', '114 ': 'G', '115 ': 'P', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAGTCACGTTGGC-1_contig_2 | TCTGGCACCAGGGGTCCCTTCCAATATCAGCACCATGGCCTGGACTCCTCTCTTTCTGTTCCTCCTCACTTGCTGCCCAGGGTCCAATTCCCAGGCTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGGCTCCAGCACTGGAGCTGTCACCAGTGGTCATTATCCCTACTGGTTCCAGCAGAAGCCTGGCCAAGCCCCCAGGACACTGATTTATGATACAAGCAACAAACACTCCTGGACACCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACCCTTTCGGGTGCGCAGCCTGAGGATGAGGCTGAGTATTACTGCTTGCTCTCCTATAGTGGTGCTCGGGCTTGGGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAGGTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV7-46*01 | null | IGLJ1*01 | CAGGCTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGGCTCCAGCACTGGAGCTGTCACCAGTGGTCATTATCCCTACTGGTTCCAGCAGAAGCCTGGCCAAGCCCCCAGGACACTGATTTATGATACAAGCAACAAACACTCCTGGACACCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACCCTTTCGGGTGCGCAGCCTGAGGATGAGGCTGAGTATTACTGCTTGCTCTCCTATAGTGGTGCTCGGGCTTGGGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | CAGGCTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGGCTCCAGCACTGGAGCTGTCACCAGTGGTCATTATCCCTACTGGTTCCAGCAGAAGCCTGGCCAAGCCCCCAGGACACTGATTTATGATACAAGCAACAAACACTCCTGGACACCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACCCTTTCGGGTGCGCAGCCTGAGGATGAGGCTGAGTATTACTGCTTGCTCTCCTATAGTGGTGCTCGGNNNNNNGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | QAVVTQEPSLTVSPGGTVTLTCGSSTGAVTSGHYPYWFQQKPGQAPRTLIYDTSNKHSWTPARFSGSLLGGKAALTLSGAQPEDEAEYYCLLSYSGARAWVFGTGTKVTVL | QAVVTQEPSLTVSPGGTVTLTCGSSTGAVTSGHYPYWFQQKPGQAPRTLIYDTSNKHSWTPARFSGSLLGGKAALTLSGAQPEDEAEYYCLLSYSGARXXVFGTGTKVTVL | 1 | 294 | null | null | 301 | 334 | CAGGCTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGGCTCCAGCACTGGAGCTGTCACCAGTGGTCATTATCCCTACTGGTTCCAGCAGAAGCCTGGCCAAGCCCCCAGGACACTGATTTATGATACAAGCAACAAACACTCCTGGACACCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACCCTTTCGGGTGCGCAGCCTGAGGATGAGGCTGAGTATTACTGCTTGCTCTCCTATAGTGGTGCTCGG | QAVVTQEPSLTVSPGGTVTLTCGSSTGAVTSGHYPYWFQQKPGQAPRTLIYDTSNKHSWTPARFSGSLLGGKAALTLSGAQPEDEAEYYCLLSYSGAR | CAGGCTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGGCTCCAGCACTGGAGCTGTCACCAGTGGTCATTATCCCTACTGGTTCCAGCAGAAGCCTGGCCAAGCCCCCAGGACACTGATTTATGATACAAGCAACAAACACTCCTGGACACCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACCCTTTCGGGTGCGCAGCCTGAGGATGAGGCTGAGTATTACTGCTTGCTCTCCTATAGTGGTGCTCGG | QAVVTQEPSLTVSPGGTVTLTCGSSTGAVTSGHYPYWFQQKPGQAPRTLIYDTSNKHSWTPARFSGSLLGGKAALTLSGAQPEDEAEYYCLLSYSGAR | null | null | null | null | GTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | VFGTGTKVTVL | GTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | VFGTGTKVTVL | CAGGCTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGGCTCCAGC | QAVVTQEPSLTVSPGGTVTLTCGSS | ACTGGAGCTGTCACCAGTGGTCATTAT | TGAVTSGHY | CCCTACTGGTTCCAGCAGAAGCCTGGCCAAGCCCCCAGGACACTGATTTAT | PYWFQQKPGQAPRTLIY | GATACAAGC | DTS | AACAAACACTCCTGGACACCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACCCTTTCGGGTGCGCAGCCTGAGGATGAGGCTGAGTATTACTGC | NKHSWTPARFSGSLLGGKAALTLSGAQPEDEAEYYC | TTCGGAACTGGGACCAAGGTCACCGTCCTA | FGTGTKVTVL | TTGCTCTCCTATAGTGGTGCTCGGGCTTGGGTC | LLSYSGARAWV | TGCTTGCTCTCCTATAGTGGTGCTCGGGCTTGGGTCTTC | 39.0 | CLLSYSGARAWVF | 13.0 | 459.921 | null | 66.059 | 91S294M251S | null | 391S4N34M211S | 2.634e-131 | null | 8.075e-15 | 100.0 | null | 100.0 | 92 | 385 | 1 | 294 | null | null | null | null | 392 | 425 | 5 | 38 | 92 | 166 | 167 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 395.0 | 424.0 | 362.0 | 394.0 | GCTTGG | 6 | null | null | GTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'A', '3 ': 'V', '4 ': 'V', '5 ': 'T', '6 ': 'Q', '7 ': 'E', '8 ': 'P', '9 ': 'S', '11 ': 'L', '12 ': 'T', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'T', '19 ': 'V', '20 ': 'T', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'G', '25 ': 'S', '26 ': 'S'}, 'cdrl1': {'27 ': 'T', '28 ': 'G', '29 ': 'A', '30 ': 'V', '31 ': 'T', '35 ': 'S', '36 ': 'G', '37 ': 'H', '38 ': 'Y'}, 'fwl2': {'39 ': 'P', '40 ': 'Y', '41 ': 'W', '42 ': 'F', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'T', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'D', '57 ': 'T', '65 ': 'S'}, 'fwl3': {'66 ': 'N', '67 ': 'K', '68 ': 'H', '69 ': 'S', '70 ': 'W', '71 ': 'T', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'L', '83 ': 'L', '84 ': 'G', '85 ': 'G', '86 ': 'K', '87 ': 'A', '88 ': 'A', '89 ': 'L', '90 ': 'T', '91 ': 'L', '92 ': 'S', '93 ': 'G', '94 ': 'A', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'E', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'L', '106 ': 'L', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '110 ': 'G', '113 ': 'A', '114 ': 'R', '115 ': 'A', '116 ': 'W', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'T', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAGTCATCCTTGC-1_contig_2 | AGCTCTGGGAGAAGAGCCCCAGCCCCAGAATTCCCAGGAGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTTGTTGCTATTATAAAAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCAAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGGGGGCCCATCGGATGACTACGGTGGTAACCGGGACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-11*01 | IGHD4-17*01 | IGHJ6*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCAAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGGGGGCCCATCGGATGACTACGGTGGTAACCGGGACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCAAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGNNNNNNNNNNNNNTGACTACGGTGNNNNNNNNNACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVESGGGLVKPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARGGPSDDYGGNRDYYGMDVWGQGTTVTVSS | QVQLVESGGGLVKPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARXXXXXDYGXXXXYYGMDVWGQGTTVTVSS | 1 | 295 | 309.0 | 319.0 | 329 | 381 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCAAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVESGGGLVKPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCAAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVESGGGLVKPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | TGACTACGGTG | DYG | TGACTACGGTG | DYG | ACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYGMDVWGQGTTVTVSS | ACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYGMDVWGQGTTVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCAAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACCTTCAGTGACTACTAC | GFTFSDYY | ATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATAC | MSWIRQAPGKGLEWVSY | ATTAGTAGTAGTGGTAGTACCATA | ISSSGSTI | TACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGT | YYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGGGGGCCCATCGGATGACTACGGTGGTAACCGGGACTACTACGGTATGGACGTC | ARGGPSDDYGGNRDYYGMDV | TGTGCGAGAGGGGGCCCATCGGATGACTACGGTGGTAACCGGGACTACTACGGTATGGACGTCTGG | 66.0 | CARGGPSDDYGGNRDYYGMDVW | 22.0 | 461.479 | 21.837 | 102.59 | 137S295M158S1N | 445S11M134S5N | 465S9N53M72S | 8.266e-132 | 0.0706 | 7.534000000000001e-26 | 100.0 | 100.0 | 100.0 | 138 | 432 | 1 | 295 | 446.0 | 456.0 | 1.0 | 11.0 | 466 | 518 | 10 | 62 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 486.0 | 518.0 | 426.0 | 485.0 | GGGGCCCATCGGA | 13 | GTAACCGGG | 9.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'D', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'S', '59 ': 'S', '62 ': 'G', '63 ': 'S', '64 ': 'T', '65 ': 'I'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'G', '109 ': 'P', '110 ': 'S', '111 ': 'D', '111A': 'D', '111B': 'Y', '111C': 'G', '112D': 'G', '112C': 'N', '112B': 'R', '112A': 'D', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAGTCATCCTTGC-1_contig_1 | GCTGTAGGCTCAGGAGGCAGAGCTCTGAATGTCTCACCATGGCCTGGATCCCTCTCCTGCTCCCCCTCCTCATTCTCTGCACAGTCTCTGTGGCCTCCTATGAGCTGACACAGCCATCCTCAGTGTCAGTGTCTCCGGGACAGACAGCCAGGATCACCTGCTCAGGAGATGTACTGGCAAAAAAATATGCTCGGTGGTTCCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATTTATAAAGACAGTGAGCGGCCCTCAGGGATCCCTGAGCGATTCTCCGGCTCCAGCTCAGGGACCACAGTCACCTTGACCATCAGCGGGGCCCAGGTTGAGGATGAGGCTGACTATTACTGTTACTCTGCGGCTGACAACAGGGGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-27*01 | null | IGLJ3*02 | TCCTATGAGCTGACACAGCCATCCTCAGTGTCAGTGTCTCCGGGACAGACAGCCAGGATCACCTGCTCAGGAGATGTACTGGCAAAAAAATATGCTCGGTGGTTCCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATTTATAAAGACAGTGAGCGGCCCTCAGGGATCCCTGAGCGATTCTCCGGCTCCAGCTCAGGGACCACAGTCACCTTGACCATCAGCGGGGCCCAGGTTGAGGATGAGGCTGACTATTACTGTTACTCTGCGGCTGACAACAGGGGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACACAGCCATCCTCAGTGTCAGTGTCTCCGGGACAGACAGCCAGGATCACCTGCTCAGGAGATGTACTGGCAAAAAAATATGCTCGGTGGTTCCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATTTATAAAGACAGTGAGCGGCCCTCAGGGATCCCTGAGCGATTCTCCGGCTCCAGCTCAGGGACCACAGTCACCTTGACCATCAGCGGGGCCCAGGTTGAGGATGAGGCTGACTATTACTGTTACTCTGCGGCTGACAACANNNGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPSSVSVSPGQTARITCSGDVLAKKYARWFQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGAQVEDEADYYCYSAADNRGVFGGGTKLTVL | SYELTQPSSVSVSPGQTARITCSGDVLAKKYARWFQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGAQVEDEADYYCYSAADNXXVFGGGTKLTVL | 1 | 280 | null | null | 284 | 319 | TCCTATGAGCTGACACAGCCATCCTCAGTGTCAGTGTCTCCGGGACAGACAGCCAGGATCACCTGCTCAGGAGATGTACTGGCAAAAAAATATGCTCGGTGGTTCCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATTTATAAAGACAGTGAGCGGCCCTCAGGGATCCCTGAGCGATTCTCCGGCTCCAGCTCAGGGACCACAGTCACCTTGACCATCAGCGGGGCCCAGGTTGAGGATGAGGCTGACTATTACTGTTACTCTGCGGCTGACAACA | SYELTQPSSVSVSPGQTARITCSGDVLAKKYARWFQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGAQVEDEADYYCYSAADN | TCCTATGAGCTGACACAGCCATCCTCAGTGTCAGTGTCTCCGGGACAGACAGCCAGGATCACCTGCTCAGGAGATGTACTGGCAAAAAAATATGCTCGGTGGTTCCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATTTATAAAGACAGTGAGCGGCCCTCAGGGATCCCTGAGCGATTCTCCGGCTCCAGCTCAGGGACCACAGTCACCTTGACCATCAGCGGGGCCCAGGTTGAGGATGAGGCTGACTATTACTGTTACTCTGCGGCTGACAACA | SYELTQPSSVSVSPGQTARITCSGDVLAKKYARWFQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGAQVEDEADYYCYSAADN | null | null | null | null | GGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TCCTATGAGCTGACACAGCCATCCTCAGTGTCAGTGTCTCCGGGACAGACAGCCAGGATCACCTGCTCAGGAGAT | SYELTQPSSVSVSPGQTARITCSGD | GTACTGGCAAAAAAATAT | VLAKKY | GCTCGGTGGTTCCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATTTAT | ARWFQQKPGQAPVLVIY | AAAGACAGT | KDS | GAGCGGCCCTCAGGGATCCCTGAGCGATTCTCCGGCTCCAGCTCAGGGACCACAGTCACCTTGACCATCAGCGGGGCCCAGGTTGAGGATGAGGCTGACTATTACTGT | ERPSGIPERFSGSSSGTTVTLTISGAQVEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | TACTCTGCGGCTGACAACAGGGGGGTG | YSAADNRGV | TGTTACTCTGCGGCTGACAACAGGGGGGTGTTC | 33.0 | CYSAADNRGVF | 11.0 | 438.107 | null | 69.904 | 95S280M250S4N | null | 378S2N36M211S | 9.531999999999999e-125 | null | 5.519e-16 | 100.0 | null | 100.0 | 96 | 375 | 1 | 280 | null | null | null | null | 379 | 414 | 3 | 38 | 96 | 170 | 171 | 188 | 189 | 239 | 240 | 248 | 249 | 356 | 384.0 | 413.0 | 357.0 | 383.0 | GGG | 3 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'S', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'V', '28 ': 'L', '29 ': 'A', '36 ': 'K', '37 ': 'K', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'R', '41 ': 'W', '42 ': 'F', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'K', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'E', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'S', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'T', '87 ': 'V', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'A', '95 ': 'Q', '96 ': 'V', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Y', '106 ': 'S', '107 ': 'A', '108 ': 'A', '109 ': 'D', '114 ': 'N', '115 ': 'R', '116 ': 'G', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAGTCATGCCACG-1_contig_2 | GGGAGCATCACCCAGCAACCACATCTGTCCTCTAGAGAATCCCCTGAGAGCTCCGTTCCTCACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCCACAGGAGCCCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGGGGTTATGATATTGTAGTGGTGGTAGCTGCTACGGGTTTCCTCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-2*02 | IGHD2-15*01 | IGHJ5*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGGGGTTATGATATTGTAGTGGTGGTAGCTGCTACGGGTTTCCTCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGNNNNNNNGATATTGTAGTGGTGGTAGCTGCTACNNNNNNNNNCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARGYDIVVVVAATGFLWFDPWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAXXXDIVVVVAATXXXWFDPWGQGTLVTVSS | 1 | 293 | 301.0 | 326.0 | 336 | 382 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCA | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCA | GATATTGTAGTGGTGGTAGCTGCTAC | DIVVVVAAT | GATATTGTAGTGGTGGTAGCTGCTAC | DIVVVVAAT | CTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | CTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCGGCTACTAT | GYTFTGYY | ATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGG | MHWVRQAPGQGLEWMGW | ATCAACCCTAACAGTGGTGGCACA | INPNSGGT | AACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGGGGTTATGATATTGTAGTGGTGGTAGCTGCTACGGGTTTCCTCTGGTTCGACCCC | ARGYDIVVVVAATGFLWFDP | TGTGCGAGGGGTTATGATATTGTAGTGGTGGTAGCTGCTACGGGTTTCCTCTGGTTCGACCCCTGG | 66.0 | CARGYDIVVVVAATGFLWFDPW | 22.0 | 458.363 | 50.677 | 91.054 | 121S293M160S3N | 421S2N26M127S3N | 456S4N47M71S | 6.964000000000005e-131 | 1.428e-10 | 2.176e-22 | 100.0 | 100.0 | 100.0 | 122 | 414 | 1 | 293 | 422.0 | 447.0 | 3.0 | 28.0 | 457 | 503 | 5 | 51 | 122 | 196 | 197 | 220 | 221 | 271 | 272 | 295 | 296 | 409 | 470.0 | 502.0 | 410.0 | 469.0 | GGGTTAT | 7 | GGGTTTCCT | 9.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'P', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'G', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'I', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'Y', '109 ': 'D', '110 ': 'I', '111 ': 'V', '111A': 'V', '111B': 'V', '111C': 'V', '112D': 'A', '112C': 'A', '112B': 'T', '112A': 'G', '112 ': 'F', '113 ': 'L', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAGTCATGCCACG-1_contig_1 | AGCCTGGGCCTCAGGAAGCAGCATCGGGGGTGCCGCAGCCATGGCCTGGACCGCTCTCCTTCTGAGCCTCCTTGCTCACTTTACAGGTTCTGTGGCCTCCTATGAGCTGACTCAGCCACTCTCAGTGTCAGTGGCCCTGGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAATGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCATCTATAGGGATAGCAACCGGCCCTCTGGGATCCCTGAGCGATTCTCTGGCTCCAACTCGGGGAACACGGCCACCCTGACCATCAGCAGAGCCCAAGCCGGGGATGAGGCTGACTATTACTGTCAGGTGTGGGACAGCAGCACTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-9*01 | null | IGLJ2*01 | TCCTATGAGCTGACTCAGCCACTCTCAGTGTCAGTGGCCCTGGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAATGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCATCTATAGGGATAGCAACCGGCCCTCTGGGATCCCTGAGCGATTCTCTGGCTCCAACTCGGGGAACACGGCCACCCTGACCATCAGCAGAGCCCAAGCCGGGGATGAGGCTGACTATTACTGTCAGGTGTGGGACAGCAGCACTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACTCAGCCACTCTCAGTGTCAGTGGCCCTGGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAATGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCATCTATAGGGATAGCAACCGGCCCTCTGGGATCCCTGAGCGATTCTCTGGCTCCAACTCGGGGAACACGGCCACCCTGACCATCAGCAGAGCCCAAGCCGGGGATGAGGCTGACTATTACTGTCAGGTGTGGGACAGCAGCACTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPLSVSVALGQTARITCGGNNIGSKNVHWYQQKPGQAPVLVIYRDSNRPSGIPERFSGSNSGNTATLTISRAQAGDEADYYCQVWDSSTVVFGGGTKLTVL | SYELTQPLSVSVALGQTARITCGGNNIGSKNVHWYQQKPGQAPVLVIYRDSNRPSGIPERFSGSNSGNTATLTISRAQAGDEADYYCQVWDSSTVVFGGGTKLTVL | 1 | 283 | null | null | 284 | 319 | TCCTATGAGCTGACTCAGCCACTCTCAGTGTCAGTGGCCCTGGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAATGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCATCTATAGGGATAGCAACCGGCCCTCTGGGATCCCTGAGCGATTCTCTGGCTCCAACTCGGGGAACACGGCCACCCTGACCATCAGCAGAGCCCAAGCCGGGGATGAGGCTGACTATTACTGTCAGGTGTGGGACAGCAGCACTG | SYELTQPLSVSVALGQTARITCGGNNIGSKNVHWYQQKPGQAPVLVIYRDSNRPSGIPERFSGSNSGNTATLTISRAQAGDEADYYCQVWDSST | TCCTATGAGCTGACTCAGCCACTCTCAGTGTCAGTGGCCCTGGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAATGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCATCTATAGGGATAGCAACCGGCCCTCTGGGATCCCTGAGCGATTCTCTGGCTCCAACTCGGGGAACACGGCCACCCTGACCATCAGCAGAGCCCAAGCCGGGGATGAGGCTGACTATTACTGTCAGGTGTGGGACAGCAGCACTG | SYELTQPLSVSVALGQTARITCGGNNIGSKNVHWYQQKPGQAPVLVIYRDSNRPSGIPERFSGSNSGNTATLTISRAQAGDEADYYCQVWDSST | null | null | null | null | TGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TCCTATGAGCTGACTCAGCCACTCTCAGTGTCAGTGGCCCTGGGACAGACGGCCAGGATTACCTGTGGGGGAAAC | SYELTQPLSVSVALGQTARITCGGN | AACATTGGAAGTAAAAAT | NIGSKN | GTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCATCTAT | VHWYQQKPGQAPVLVIY | AGGGATAGC | RDS | AACCGGCCCTCTGGGATCCCTGAGCGATTCTCTGGCTCCAACTCGGGGAACACGGCCACCCTGACCATCAGCAGAGCCCAAGCCGGGGATGAGGCTGACTATTACTGT | NRPSGIPERFSGSNSGNTATLTISRAQAGDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGGTGTGGGACAGCAGCACTGTGGTA | QVWDSSTVV | TGTCAGGTGTGGGACAGCAGCACTGTGGTATTC | 33.0 | CQVWDSSTVVF | 11.0 | 442.782 | null | 69.904 | 97S283M247S2N | null | 380S2N36M211S | 3.746e-126 | null | 5.537e-16 | 100.0 | null | 100.0 | 98 | 380 | 1 | 283 | null | null | null | null | 381 | 416 | 3 | 38 | 98 | 172 | 173 | 190 | 191 | 241 | 242 | 250 | 251 | 358 | 386.0 | 415.0 | 359.0 | 385.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'L', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'A', '15 ': 'L', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'G', '25 ': 'G', '26 ': 'N'}, 'cdrl1': {'27 ': 'N', '28 ': 'I', '29 ': 'G', '36 ': 'S', '37 ': 'K', '38 ': 'N'}, 'fwl2': {'39 ': 'V', '40 ': 'H', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'R', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'N', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'A', '95 ': 'Q', '96 ': 'A', '97 ': 'G', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'V', '107 ': 'W', '108 ': 'D', '109 ': 'S', '114 ': 'S', '115 ': 'T', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAGTCATTACGAC-1_contig_1 | AGGTCTCAGAGAGGAGCCTTAGCCCTGGACTCCAAGGCCTTTCCACTTGGTGATCAGCACTGAGCACAGAGGACTCACCATGGAATTGGGGCTGAGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGGGGTTTTAAGTAGCAGCTGGTACAAATCCGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-7*01 | IGHD6-13*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGGGGTTTTAAGTAGCAGCTGGTACAAATCCGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGNNNNNNNNNNNAGCAGCTGGTACNNNNNNNTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARGVLSSSWYKSVDYWGQGTLVTVSS | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARXXXXSSWYXXXDYWGQGTLVTVSS | 1 | 295 | 307.0 | 318.0 | 326 | 367 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAG | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAG | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | AGCAGCTGGTAC | SSWY | AGCAGCTGGTAC | SSWY | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGTAGCTATTGG | GFTFSSYW | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAAC | MSWVRQAPGKGLEWVAN | ATAAAGCAAGATGGAAGTGAGAAA | IKQDGSEK | TACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGGGGTTTTAAGTAGCAGCTGGTACAAATCCGTTGACTAC | ARGVLSSSWYKSVDY | TGTGCGAGAGGGGTTTTAAGTAGCAGCTGGTACAAATCCGTTGACTACTGG | 51.0 | CARGVLSSSWYKSVDYW | 17.0 | 461.479 | 23.76 | 81.44 | 136S295M143S1N | 442S9N12M120S | 461S6N42M71S | 8.031e-132 | 0.01811 | 1.704e-19 | 100.0 | 100.0 | 100.0 | 137 | 431 | 1 | 295 | 443.0 | 454.0 | 10.0 | 21.0 | 462 | 503 | 7 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 470.0 | 502.0 | 425.0 | 469.0 | GGGTTTTAAGT | 11 | AAATCCG | 7.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'W'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'N'}, 'cdrh2': {'56 ': 'I', '57 ': 'K', '58 ': 'Q', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'E', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'V', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'V', '109 ': 'L', '110 ': 'S', '111 ': 'S', '111A': 'S', '112A': 'W', '112 ': 'Y', '113 ': 'K', '114 ': 'S', '115 ': 'V', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAGTCATTACGAC-1_contig_2 | AGGAATCAGACCCAGTCAGGACACAGCATGGACATGAGAGTCCTCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGTTTCCCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTTTCAGCAGAAACCAGGGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAAGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-16*02 | null | IGKJ4*01 | GACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTTTCAGCAGAAACCAGGGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAAGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTTTCAGCAGAAACCAGGGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAAGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQGISNYLAWFQQKPGKAPKSLIYAASSLQSGVPSKFSGSGSGTDFTLTISSLQPEDFATYYCQQYNSYPLTFGGGTKVEIK | DIQMTQSPSSLSASVGDRVTITCRASQGISNYLAWFQQKPGKAPKSLIYAASSLQSGVPSKFSGSGSGTDFTLTISSLQPEDFATYYCQQYNSYPLTFGGGTKVEIK | 1 | 286 | null | null | 287 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTTTCAGCAGAAACCAGGGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAAGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCTC | DIQMTQSPSSLSASVGDRVTITCRASQGISNYLAWFQQKPGKAPKSLIYAASSLQSGVPSKFSGSGSGTDFTLTISSLQPEDFATYYCQQYNSYP | GACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTTTCAGCAGAAACCAGGGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAAGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCTC | DIQMTQSPSSLSASVGDRVTITCRASQGISNYLAWFQQKPGKAPKSLIYAASSLQSGVPSKFSGSGSGTDFTLTISSLQPEDFATYYCQQYNSYP | null | null | null | null | TCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | TCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGGGCATTAGCAATTAT | QGISNY | TTAGCCTGGTTTCAGCAGAAACCAGGGAAAGCCCCTAAGTCCCTGATCTAT | LAWFQQKPGKAPKSLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAAGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGC | SLQSGVPSKFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAACAGTATAATAGTTACCCTCTCACT | QQYNSYPLT | TGCCAACAGTATAATAGTTACCCTCTCACTTTC | 33.0 | CQQYNSYPLTF | 11.0 | 447.456 | null | 69.904 | 93S286M172S1N | null | 379S2N36M136S | 1.288e-127 | null | 4.854e-16 | 100.0 | null | 100.0 | 94 | 379 | 1 | 286 | null | null | null | null | 380 | 415 | 3 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 385.0 | 414.0 | 358.0 | 384.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'F', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'S', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'K', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'S', '114 ': 'Y', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAGTGTCTTCGTC-1_contig_1 | AGCTCTGGGAGAGGAGCCCCAGCCGTGAGATTCCCAGGAGTTTCCACTTGGTGATCAGCACTGAACACAGACCACCAACCATGGAGTTTGGGCTTAGCTGGGTTTTCCTTGTTGCTATTTTAAAAGGTGTCCAATGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAGTCCTCTGGACGTACCATTGTAGTGGTGGTAGCTGCTACTCCGAGGGGAATGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-49*04 | IGHD2-15*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAGTCCTCTGGACGTACCATTGTAGTGGTGGTAGCTGCTACTCCGAGGGGAATGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAGNNNNNNNNNNNNNNNATTGTAGTGGTGGTAGCTGCTACTCCNNNNNNNNNNACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVQPGRSLRLSCTASGFTFGDYAMSWVRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTRVLWTYHCSGGSCYSEGNDYFDYWGQGTLVTVSS | EVQLVESGGGLVQPGRSLRLSCTASGFTFGDYAMSWVRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTRXXXXXXCSGGSCYSXXXXYFDYWGQGTLVTVSS | 1 | 301 | 317.0 | 342.0 | 353 | 400 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAG | EVQLVESGGGLVQPGRSLRLSCTASGFTFGDYAMSWVRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAG | EVQLVESGGGLVQPGRSLRLSCTASGFTFGDYAMSWVRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTR | ATTGTAGTGGTGGTAGCTGCTACTCC | CSGGSCYS | ATTGTAGTGGTGGTAGCTGCTACTCC | CSGGSCYS | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCT | EVQLVESGGGLVQPGRSLRLSCTAS | GGATTCACCTTTGGTGATTATGCT | GFTFGDYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTC | MSWVRQAPGKGLEWVGF | ATTAGAAGCAAAGCTTATGGTGGGACAACA | IRSKAYGGTT | GAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGT | EYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | ACTAGAGTCCTCTGGACGTACCATTGTAGTGGTGGTAGCTGCTACTCCGAGGGGAATGACTACTTTGACTAC | TRVLWTYHCSGGSCYSEGNDYFDY | TGTACTAGAGTCCTCTGGACGTACCATTGTAGTGGTGGTAGCTGCTACTCCGAGGGGAATGACTACTTTGACTACTGG | 78.0 | CTRVLWTYHCSGGSCYSEGNDYFDYW | 26.0 | 470.828 | 50.677 | 92.976 | 137S301M170S1N | 453S5N26M129S | 489S48M71S | 1.309e-134 | 1.515e-10 | 6.085e-23 | 100.0 | 100.0 | 100.0 | 138 | 438 | 1 | 301 | 454.0 | 479.0 | 6.0 | 31.0 | 490 | 537 | 1 | 48 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 317 | 318 | 431 | 504.0 | 536.0 | 432.0 | 503.0 | TCCTCTGGACGTACC | 15 | GAGGGGAATG | 10.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'G', '36 ': 'D', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'G', '55 ': 'F'}, 'cdrh2': {'56 ': 'I', '57 ': 'R', '58 ': 'S', '59 ': 'K', '60 ': 'A', '61 ': 'Y', '62 ': 'G', '63 ': 'G', '64 ': 'T', '65 ': 'T'}, 'fwh3': {'66 ': 'E', '67 ': 'Y', '68 ': 'A', '69 ': 'A', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'D', '83 ': 'S', '84 ': 'K', '85 ': 'S', '86 ': 'I', '87 ': 'A', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'T', '106 ': 'R', '107 ': 'V', '108 ': 'L', '109 ': 'W', '110 ': 'T', '111 ': 'Y', '111A': 'H', '111B': 'C', '111C': 'S', '111D': 'G', '111E': 'G', '112F': 'S', '112E': 'C', '112D': 'Y', '112C': 'S', '112B': 'E', '112A': 'G', '112 ': 'N', '113 ': 'D', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAGTGTCTTCGTC-1_contig_2 | AGCTTCAGCTGTGGGTAGAGAAGACAGGACTCAGGACAATCTCCAGCATGGCCAGCTTCCCTCTCCTCCTCACCCTCCTCACTCACTGTGCAGGGTCCTGGGCCCAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTCCGGGTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-44*01 | null | IGLJ3*02 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTCCGGGTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTCCNNNTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGPGWVFGGGTKLTVL | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGPXWVFGGGTKLTVL | 1 | 296 | null | null | 300 | 337 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTCC | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGP | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTCC | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGP | null | null | null | null | TTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | TTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGC | QSVLTQPPSASGTPGQRVTISCSGS | AGCTCCAACATCGGAAGTAATACT | SSNIGSNT | GTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTAT | VNWYQQLPGTAPKLLIY | AGTAATAAT | SNN | CAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGT | QRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | GCAGCATGGGATGACAGCCTGAATGGTCCGGGTTGGGTG | AAWDDSLNGPGWV | TGTGCAGCATGGGATGACAGCCTGAATGGTCCGGGTTGGGTGTTC | 45.0 | CAAWDDSLNGPGWVF | 15.0 | 463.037 | null | 73.749 | 104S296M252S | null | 403S38M211S | 3.117e-132 | null | 4.009e-17 | 100.0 | null | 100.0 | 105 | 400 | 1 | 296 | null | null | null | null | 404 | 441 | 1 | 38 | 105 | 179 | 180 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 411.0 | 440.0 | 372.0 | 410.0 | GGG | 3 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'A', '12 ': 'S', '13 ': 'G', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'S', '37 ': 'N', '38 ': 'T'}, 'fwl2': {'39 ': 'V', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'S', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'Q', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'A', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'A', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'D', '110 ': 'S', '111 ': 'L', '112 ': 'N', '113 ': 'G', '114 ': 'P', '115 ': 'G', '116 ': 'W', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAGTGTGGCGAAT-1_contig_2 | CGTATTTCTTCTCTGGGGAGCTCTGGGAGAGGAGCCCCAGCCCTGAGATTCCCAGGTGTTTCCATTCAGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTGGGACTGAGCTGGATTTTCCTTTTGGCTATTTTAAAAGGTGTCCAGTGTGAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATATTCTAACGTATTACTATGATAGTAGTGGTTATGGGGGTTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-9*01 | IGHD3-22*01 | IGHJ6*02 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATATTCTAACGTATTACTATGATAGTAGTGGTTATGGGGGTTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATANNNNNNNGTATTACTATGATAGTAGTGGTTATNNNNNNTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDILTYYYDSSGYGGYGMDVWGQGTTVTVSS | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDXXXYYYDSSGYXXYGMDVWGQGTTVTVSS | 1 | 298 | 306.0 | 330.0 | 337 | 384 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATA | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKD | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATA | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKD | GTATTACTATGATAGTAGTGGTTAT | YYYDSSGY | GTATTACTATGATAGTAGTGGTTAT | YYYDSSGY | TACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YGMDVWGQGTTVTVSS | TACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YGMDVWGQGTTVTVSS | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGRSLRLSCAAS | GGATTCACCTTTGATGATTATGCC | GFTFDDYA | ATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGT | MHWVRQAPGKGLEWVSG | ATTAGTTGGAATAGTGGTAGCATA | ISWNSGSI | GGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGT | GYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCAAAAGATATTCTAACGTATTACTATGATAGTAGTGGTTATGGGGGTTACGGTATGGACGTC | AKDILTYYYDSSGYGGYGMDV | TGTGCAAAAGATATTCTAACGTATTACTATGATAGTAGTGGTTATGGGGGTTACGGTATGGACGTCTGG | 69.0 | CAKDILTYYYDSSGYGGYGMDVW | 23.0 | 466.153 | 48.755 | 92.976 | 155S298M158S | 460S25M126S6N | 491S14N48M72S | 3.3589999999999998e-133 | 5.771e-10 | 6.115e-23 | 100.0 | 100.0 | 100.0 | 156 | 453 | 1 | 298 | 461.0 | 485.0 | 1.0 | 25.0 | 492 | 539 | 15 | 62 | 156 | 230 | 231 | 254 | 255 | 305 | 306 | 329 | 330 | 443 | 507.0 | 539.0 | 444.0 | 506.0 | TTCTAAC | 7 | GGGGGT | 6.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'D', '36 ': 'D', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'G'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'W', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'I'}, 'fwh3': {'66 ': 'G', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'L', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'D', '108 ': 'I', '109 ': 'L', '110 ': 'T', '111 ': 'Y', '111A': 'Y', '111B': 'Y', '111C': 'D', '111D': 'S', '112D': 'S', '112C': 'G', '112B': 'Y', '112A': 'G', '112 ': 'G', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAGTGTGGCGAAT-1_contig_1 | AGAGCTCTGGAGAAGAGCTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCCCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-20*01 | null | IGKJ2*01 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCCCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPYTFGQGTKLEIK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPYTFGQGTKLEIK | 1 | 287 | null | null | 288 | 325 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCCCC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | null | null | null | null | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPGTLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCAGCTAC | QSVSSSY | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAGCAGTATGGTAGCTCCCCGTACACT | QQYGSSPYT | TGTCAGCAGTATGGTAGCTCCCCGTACACTTTT | 33.0 | CQQYGSSPYTF | 11.0 | 445.898 | null | 73.749 | 104S287M174S3N | null | 391S1N38M136S | 3.894e-127 | null | 3.465e-17 | 99.652 | null | 100.0 | 105 | 391 | 1 | 287 | null | null | null | null | 392 | 429 | 2 | 39 | 105 | 182 | 183 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 399.0 | 428.0 | 372.0 | 398.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'G', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'G', '109 ': 'S', '114 ': 'S', '115 ': 'P', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAGTGTTAAGGGC-1_contig_1 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGTACTCAATGATTACTATGATAGTTACTTGCCAGAAGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD3-22*01 | IGHJ4*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGTACTCAATGATTACTATGATAGTTACTTGCCAGAAGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGNNNNNNNNNATTACTATGATAGTNNNNNNNNNNNNGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKVLNDYYDSYLPEDYWGQGTLVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXXXYYDSXXXXDYWGQGTLVTVSS | 1 | 295 | 305.0 | 318.0 | 331 | 370 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | ATTACTATGATAGT | YYDS | ATTACTATGATAGT | YYDS | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAAAGTACTCAATGATTACTATGATAGTTACTTGCCAGAAGACTAC | AKVLNDYYDSYLPEDY | TGTGCGAAAGTACTCAATGATTACTATGATAGTTACTTGCCAGAAGACTACTGG | 54.0 | CAKVLNDYYDSYLPEDYW | 18.0 | 461.479 | 27.605 | 77.595 | 136S295M146S1N | 440S2N14M123S15N | 466S8N40M71S | 8.075e-132 | 0.001267 | 2.463e-18 | 100.0 | 100.0 | 100.0 | 137 | 431 | 1 | 295 | 441.0 | 454.0 | 3.0 | 16.0 | 467 | 506 | 9 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 473.0 | 505.0 | 425.0 | 472.0 | TACTCAATG | 9 | TACTTGCCAGAA | 12.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'V', '108 ': 'L', '109 ': 'N', '110 ': 'D', '111 ': 'Y', '111A': 'Y', '112B': 'D', '112A': 'S', '112 ': 'Y', '113 ': 'L', '114 ': 'P', '115 ': 'E', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAGTGTTAAGGGC-1_contig_2 | TGGGGAGAGCTCTGGGGAGGAACTGCTCAGTTAGGACCCAGACGGAACCATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACTGGAGAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-15*01 | null | IGKJ4*01 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPLTFGGGTKVEIK | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPLTFGGGTKVEIK | 1 | 286 | null | null | 287 | 322 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWP | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWP | null | null | null | null | TCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | TCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVMTQSPATLSVSPGERATLSCRAS | CAGAGTGTTAGCAGCAAC | QSVSSN | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | ACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGT | TRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAGCAGTATAATAACTGGCCTCTCACT | QQYNNWPLT | TGTCAGCAGTATAATAACTGGCCTCTCACTTTC | 33.0 | CQQYNNWPLTF | 11.0 | 447.456 | null | 69.904 | 109S286M172S1N | null | 395S2N36M136S | 1.327e-127 | null | 4.998e-16 | 100.0 | null | 100.0 | 110 | 395 | 1 | 286 | null | null | null | null | 396 | 431 | 3 | 38 | 110 | 187 | 188 | 205 | 206 | 256 | 257 | 265 | 266 | 373 | 401.0 | 430.0 | 374.0 | 400.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'N'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'N', '114 ': 'W', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAGTGTTGGACCC-1_contig_1 | GAGCTCTGGGAGAGGAGCCCAGCACTAGAAGTCGGCGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGACGGGATATATAGTGGCTACGTCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-33*01 | IGHD5-12*01 | IGHJ6*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGACGGGATATATAGTGGCTACGTCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGANNNNNNATATAGTGGCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDGIYSGYVMDVWGQGTTVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXXXYSGYGMDVWGQGTTVTVSS | 1 | 296 | 303.0 | 311.0 | 312 | 360 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | ATATAGTGG | YSG | ATATAGTGG | YSG | CTACGTCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YVMDVWGQGTTVTVSS | CTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YGMDVWGQGTTVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGGC | GFTFSSYG | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATGGTATGATGGAAGTAATAAA | IWYDGSNK | TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGACGGGATATATAGTGGCTACGTCATGGACGTC | ARDGIYSGYVMDV | TGTGCGAGAGACGGGATATATAGTGGCTACGTCATGGACGTCTGG | 45.0 | CARDGIYSGYVMDVW | 15.0 | 463.037 | 17.992 | 83.363 | 137S296M136S | 439S4N9M121S10N | 448S13N49M72S | 2.717e-132 | 0.9781 | 4.4550000000000004e-20 | 100.0 | 100.0 | 95.918 | 138 | 433 | 1 | 296 | 440.0 | 448.0 | 5.0 | 13.0 | 449 | 497 | 14 | 62 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 465.0 | 497.0 | 426.0 | 464.0 | CGGGAT | 6 | null | 0.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'W', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'G', '109 ': 'I', '110 ': 'Y', '111 ': 'S', '112 ': 'G', '113 ': 'Y', '114 ': 'V', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAGTGTTGGACCC-1_contig_2 | AGTCCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAGATGTGACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCCTTTTTCGGCCCTGGGACCAAAGTGGATATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-9*01 | null | IGKJ3*01 | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCCTTTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCNNNTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPFFGPGTKVDIK | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPXFGPGTKVDIK | 1 | 284 | null | null | 288 | 319 | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCC | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYP | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCC | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYP | null | null | null | null | TTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FGPGTKVDIK | TTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FGPGTKVDIK | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQLTQSPSFLSASVGDRVTITCRAS | CAGGGCATTAGCAGTTAT | QGISSY | TTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | GCTGCATCC | AAS | ACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGT | TLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYC | TTCGGCCCTGGGACCAAAGTGGATATCAAA | FGPGTKVDIK | CAACAGCTTAATAGTTACCCCTTT | QQLNSYPF | TGTCAACAGCTTAATAGTTACCCCTTTTTC | 30.0 | CQQLNSYPFF | 10.0 | 444.34 | null | 62.213 | 86S284M171S3N | null | 373S6N32M136S | 1.095e-126 | null | 9.843e-14 | 100.0 | null | 100.0 | 87 | 370 | 1 | 284 | null | null | null | null | 374 | 405 | 7 | 38 | 87 | 164 | 165 | 182 | 183 | 233 | 234 | 242 | 243 | 350 | 375.0 | 404.0 | 351.0 | 374.0 | CTT | 3 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'F', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'L', '108 ': 'N', '114 ': 'S', '115 ': 'Y', '116 ': 'P', '117 ': 'F'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'P', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'D', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAGTTCAATCACG-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATCCGTGGCTACATCCAACCGTCCTCGGTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD5-12*01 | IGHJ4*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATCCGTGGCTACATCCAACCGTCCTCGGTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGANNNGTGGCTACNNNNNNNNNNNNNNNNNTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDPWLHPTVLGYFDYWGQGTLVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXWLXXXXXXYFDYWGQGTLVTVSS | 1 | 296 | 300.0 | 307.0 | 325 | 370 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GTGGCTAC | WL | GTGGCTAC | WL | TACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | TACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAAAGATCCGTGGCTACATCCAACCGTCCTCGGTTACTTTGACTAC | AKDPWLHPTVLGYFDY | TGTGCGAAAGATCCGTGGCTACATCCAACCGTCCTCGGTTACTTTGACTACTGG | 54.0 | CAKDPWLHPTVLGYFDYW | 18.0 | 463.037 | 16.069 | 89.131 | 136S296M145S | 435S9N8M134S6N | 460S2N46M71S | 2.742e-132 | 3.761 | 8.291999999999999e-22 | 100.0 | 100.0 | 100.0 | 137 | 432 | 1 | 296 | 436.0 | 443.0 | 10.0 | 17.0 | 461 | 506 | 3 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 473.0 | 505.0 | 425.0 | 472.0 | TCC | 3 | ATCCAACCGTCCTCGGT | 17.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'D', '108 ': 'P', '109 ': 'W', '110 ': 'L', '111 ': 'H', '111A': 'P', '112B': 'T', '112A': 'V', '112 ': 'L', '113 ': 'G', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAGTTCAATCACG-1_contig_1 | TGAGCGCAGAAGGCAGGACTCGGGACAATCTTCATCATGACCTGCTCCCCTCTCCTCCTCACCCTTCTCATTCACTGCACAGGGTCCTGGGCCCAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCCTTTTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAGGTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-51*01 | null | IGLJ1*01 | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCCTTTTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCNNNTTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSAFYVFGTGTKVTVL | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSAXYVFGTGTKVTVL | 1 | 293 | null | null | 297 | 334 | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGC | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSA | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGC | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSA | null | null | null | null | TTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | YVFGTGTKVTVL | TTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | YVFGTGTKVTVL | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGC | QSVLTQPPSVSAAPGQKVTISCSGS | AGCTCCAACATTGGGAATAATTAT | SSNIGNNY | GTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTAT | VSWYQQLPGTAPKLLIY | GACAATAAT | DNN | AAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGC | KRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYC | TTCGGAACTGGGACCAAGGTCACCGTCCTA | FGTGTKVTVL | GGAACATGGGATAGCAGCCTGAGTGCCTTTTATGTC | GTWDSSLSAFYV | TGCGGAACATGGGATAGCAGCCTGAGTGCCTTTTATGTCTTC | 42.0 | CGTWDSSLSAFYVF | 14.0 | 458.363 | null | 73.749 | 93S293M252S3N | null | 389S38M211S | 7.781000000000005e-131 | null | 3.921e-17 | 100.0 | null | 100.0 | 94 | 386 | 1 | 293 | null | null | null | null | 390 | 427 | 1 | 38 | 94 | 168 | 169 | 192 | 193 | 243 | 244 | 252 | 253 | 360 | 397.0 | 426.0 | 361.0 | 396.0 | CTT | 3 | null | null | GTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'A', '14 ': 'A', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'K', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'N', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'D', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'G', '91 ': 'I', '92 ': 'T', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'T', '97 ': 'G', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'G', '106 ': 'T', '107 ': 'W', '108 ': 'D', '109 ': 'S', '110 ': 'S', '112 ': 'L', '113 ': 'S', '114 ': 'A', '115 ': 'F', '116 ': 'Y', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'T', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAGTTCCTGCCAT-1_contig_2 | GGGAGCATCACCCAGCAACCACATCTGTCCTCTAGAGAATCCCCTGAGAGCTCCGTTCCTCACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCCACAGGAGCCCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGATCAGGGCTACGGTGCCCCAGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-2*06 | IGHD4-17*01 | IGHJ4*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGATCAGGGCTACGGTGCCCCAGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGANNNNNNCTACGGTGNNNNNNTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARDQGYGAPVDYWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARXXXYGXXXDYWGQGTLVTVSS | 1 | 296 | 303.0 | 310.0 | 317 | 358 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGRINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | CTACGGTG | YG | CTACGGTG | YG | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCGGCTACTAT | GYTFTGYY | ATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACGG | MHWVRQAPGQGLEWMGR | ATCAACCCTAACAGTGGTGGCACA | INPNSGGT | AACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGATCAGGGCTACGGTGCCCCAGTTGACTAC | ARDQGYGAPVDY | TGTGCGAGAGATCAGGGCTACGGTGCCCCAGTTGACTACTGG | 42.0 | CARDQGYGAPVDYW | 14.0 | 463.037 | 16.069 | 81.44 | 121S296M133S | 423S3N8M119S5N | 437S6N42M71S | 2.6220000000000002e-132 | 3.582 | 1.631e-19 | 100.0 | 100.0 | 100.0 | 122 | 417 | 1 | 296 | 424.0 | 431.0 | 4.0 | 11.0 | 438 | 479 | 7 | 48 | 122 | 196 | 197 | 220 | 221 | 271 | 272 | 295 | 296 | 409 | 446.0 | 478.0 | 410.0 | 445.0 | TCAGGG | 6 | CCCCAG | 6.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'P', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'G', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'I', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'Q', '109 ': 'G', '110 ': 'Y', '112 ': 'G', '113 ': 'A', '114 ': 'P', '115 ': 'V', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAGTTCCTGCCAT-1_contig_1 | AGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAAATGTGACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCGAACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-5*03 | null | IGKJ2*01 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCGAACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCNNACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSNTFGQGTKLEIK | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSXTFGQGTKLEIK | 1 | 284 | null | null | 287 | 322 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYS | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYS | null | null | null | null | ACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | TFGQGTKLEIK | ACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | TFGQGTKLEIK | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQMTQSPSTLSASVGDRVTITCRAS | CAGAGTATTAGTAGCTGG | QSISSW | TTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | AAGGCGTCT | KAS | AGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGC | SLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAACAGTATAATAGTTATTCGAACACT | QQYNSYSNT | TGCCAACAGTATAATAGTTATTCGAACACTTTT | 33.0 | CQQYNSYSNTF | 11.0 | 444.34 | null | 69.904 | 93S284M174S3N | null | 379S3N36M136S | 1.117e-126 | null | 4.854e-16 | 100.0 | null | 100.0 | 94 | 377 | 1 | 284 | null | null | null | null | 380 | 415 | 4 | 39 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 385.0 | 414.0 | 358.0 | 384.0 | GA | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'W'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'K', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'D', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'S', '114 ': 'Y', '115 ': 'S', '116 ': 'N', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAGTTCGCGCCAA-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAGTCCGGGGCGGGGTGGGTACAGGAATACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD5-18*01 | IGHJ1*01 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAGTCCGGGGCGGGGTGGGTACAGGAATACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAANNNNNNNNNNNNGTGGATACAGGAATACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKSGAGWVQEYFQHWGQGTLVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAXXXXXWIQEYFQHWGQGTLVTVSS | 1 | 293 | 306.0 | 315.0 | 316 | 364 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | GTGGGTACAG | WVQ | GTGGATACAG | WIQ | GAATACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG | EYFQHWGQGTLVTVSS | GAATACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG | EYFQHWGQGTLVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGCACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAAGTCCGGGGCGGGGTGGGTACAGGAATACTTCCAGCAC | AKSGAGWVQEYFQH | TGTGCGAAGTCCGGGGCGGGGTGGGTACAGGAATACTTCCAGCACTGG | 48.0 | CAKSGAGWVQEYFQHW | 16.0 | 458.363 | 14.146 | 94.899 | 136S293M142S3N | 441S10M120S10N | 451S3N49M71S | 6.964000000000005e-131 | 14.11 | 1.505e-23 | 100.0 | 90.0 | 100.0 | 137 | 429 | 1 | 293 | 442.0 | 451.0 | 1.0 | 10.0 | 452 | 500 | 4 | 52 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 467.0 | 499.0 | 425.0 | 466.0 | GTCCGGGGCGGG | 12 | null | 0.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'S', '108 ': 'G', '109 ': 'A', '110 ': 'G', '111 ': 'W', '112A': 'V', '112 ': 'Q', '113 ': 'E', '114 ': 'Y', '115 ': 'F', '116 ': 'Q', '117 ': 'H'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAGTTCGCGCCAA-1_contig_1 | AGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAAATGTGACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCCCTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-5*03 | null | IGKJ1*01 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCCCTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCCNTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSPWTFGQGTKVEIK | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSPWTFGQGTKVEIK | 1 | 287 | null | null | 289 | 325 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSP | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSP | null | null | null | null | TGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | TGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQMTQSPSTLSASVGDRVTITCRAS | CAGAGTATTAGTAGCTGG | QSISSW | TTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | AAGGCGTCT | KAS | AGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGC | SLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAACAGTATAATAGTTATTCTCCCTGGACG | QQYNSYSPWT | TGCCAACAGTATAATAGTTATTCTCCCTGGACGTTC | 36.0 | CQQYNSYSPWTF | 12.0 | 449.014 | null | 71.827 | 93S287M174S | null | 381S1N37M136S | 4.398e-128 | null | 1.287e-16 | 100.0 | null | 100.0 | 94 | 380 | 1 | 287 | null | null | null | null | 382 | 418 | 2 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 388.0 | 417.0 | 358.0 | 387.0 | C | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'W'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'K', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'D', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'S', '113 ': 'Y', '114 ': 'S', '115 ': 'P', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGAGTTCGCTTGTC-1_contig_1 | GGGGAGGGTCCTGCTCACATGGGAAATACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACACCTGTGGTTCTTCCTCCTGCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGATGGAGTCAGGGTGGGCACGAATAGTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-30-4*01 | IGHD3-3*01 | IGHJ4*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGATGGAGTCAGGGTGGGCACGAATAGTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGATGGAGTNNNNNNNNNNNNNNNNNNNTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARDGVRVGTNSFDYWGQGTLVTVSS | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARDGVXXXXXXFDYWGQGTLVTVSS | 1 | 299 | 300.0 | 305.0 | 325 | 367 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | TGGAGT | GV | TGGAGT | GV | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSQTLSLTCTVS | GGTGGCTCCATCAGCAGTGGTGATTACTAC | GGSISSGDYY | TGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTAC | WSWIRQPPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCCAGAGATGGAGTCAGGGTGGGCACGAATAGTTTTGACTAC | ARDGVRVGTNSFDY | TGTGCCAGAGATGGAGTCAGGGTGGGCACGAATAGTTTTGACTACTGG | 48.0 | CARDGVRVGTNSFDYW | 16.0 | 467.712 | 12.223 | 83.363 | 119S299M139S | 418S13N6M133S12N | 443S5N43M71S | 1.041e-133 | 52.16 | 4.3590000000000004e-20 | 100.0 | 100.0 | 100.0 | 120 | 418 | 1 | 299 | 419.0 | 424.0 | 14.0 | 19.0 | 444 | 486 | 6 | 48 | 120 | 194 | 195 | 224 | 225 | 275 | 276 | 296 | 297 | 410 | 453.0 | 485.0 | 411.0 | 452.0 | null | 0 | CAGGGTGGGCACGAATAGT | 19.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'G', '36 ': 'D', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'G', '109 ': 'V', '110 ': 'R', '111 ': 'V', '112A': 'G', '112 ': 'T', '113 ': 'N', '114 ': 'S', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGAGTTCGCTTGTC-1_contig_2 | CGGGGAGGAGTCAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ1*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPRTFGQGTKVEIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPRTFGQGTKVEIK | 1 | 286 | null | null | 287 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | null | null | null | null | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAACAGAGTTACAGTACCCCTCGGACG | QQSYSTPRT | TGTCAACAGAGTTACAGTACCCCTCGGACGTTC | 33.0 | CQQSYSTPRTF | 11.0 | 447.456 | null | 69.904 | 98S286M172S1N | null | 384S2N36M136S | 1.3e-127 | null | 4.899e-16 | 100.0 | null | 100.0 | 99 | 384 | 1 | 286 | null | null | null | null | 385 | 420 | 3 | 38 | 99 | 176 | 177 | 194 | 195 | 245 | 246 | 254 | 255 | 362 | 390.0 | 419.0 | 363.0 | 389.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'P', '116 ': 'R', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGATGAGATGAGAG-1_contig_2 | AGCTCTGGGAGAGGAGCCCCAGCCGTGAGATTCCCAGGAGTTTCCACTTGGTGATCAGCACTGAACACAGACCACCAACCATGGAGTTTGGGCTTAGCTGGGTTTTCCTTGTTGCTATTTTAAAAGGTGTCCAATGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGTTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAGACTTTTATGGTTCGGGGAGCCACCTGGGGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-49*05 | IGHD3-10*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGTTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAGACTTTTATGGTTCGGGGAGCCACCTGGGGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGTTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAGANNNNTATGGTTCGGGGAGNNNNNNNNNNTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVKPGRSLRLSCTASGFTFGDYAMSWFRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTRDFYGSGSHLGYWGQGTLVTVSS | EVQLVESGGGLVKPGRSLRLSCTASGFTFGDYAMSWFRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTRXXYGSGXXXXYWGQGTLVTVSS | 1 | 302 | 307.0 | 320.0 | 331 | 367 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGTTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAGA | EVQLVESGGGLVKPGRSLRLSCTASGFTFGDYAMSWFRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGTTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAGA | EVQLVESGGGLVKPGRSLRLSCTASGFTFGDYAMSWFRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTR | TATGGTTCGGGGAG | YGSG | TATGGTTCGGGGAG | YGSG | TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YWGQGTLVTVSS | TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCT | EVQLVESGGGLVKPGRSLRLSCTAS | GGATTCACCTTTGGTGATTATGCT | GFTFGDYA | ATGAGCTGGTTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTC | MSWFRQAPGKGLEWVGF | ATTAGAAGCAAAGCTTATGGTGGGACAACA | IRSKAYGGTT | GAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGT | EYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | ACTAGAGACTTTTATGGTTCGGGGAGCCACCTGGGGTAC | TRDFYGSGSHLGY | TGTACTAGAGACTTTTATGGTTCGGGGAGCCACCTGGGGTACTGG | 45.0 | CTRDFYGSGSHLGYW | 15.0 | 472.386 | 27.605 | 71.827 | 137S302M136S | 443S7N14M118S10N | 467S11N37M71S | 4.191e-135 | 0.001262 | 1.337e-16 | 100.0 | 100.0 | 100.0 | 138 | 439 | 1 | 302 | 444.0 | 457.0 | 8.0 | 21.0 | 468 | 504 | 12 | 48 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 317 | 318 | 431 | 471.0 | 503.0 | 432.0 | 470.0 | CTTT | 4 | CCACCTGGGG | 10.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'G', '36 ': 'D', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'F', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'G', '55 ': 'F'}, 'cdrh2': {'56 ': 'I', '57 ': 'R', '58 ': 'S', '59 ': 'K', '60 ': 'A', '61 ': 'Y', '62 ': 'G', '63 ': 'G', '64 ': 'T', '65 ': 'T'}, 'fwh3': {'66 ': 'E', '67 ': 'Y', '68 ': 'A', '69 ': 'A', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'D', '83 ': 'S', '84 ': 'K', '85 ': 'S', '86 ': 'I', '87 ': 'A', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'T', '106 ': 'R', '107 ': 'D', '108 ': 'F', '109 ': 'Y', '110 ': 'G', '111 ': 'S', '112 ': 'G', '113 ': 'S', '114 ': 'H', '115 ': 'L', '116 ': 'G', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGATGAGATGAGAG-1_contig_1 | GATCAGGACTCCTCAGTTCACCTTCTCACAATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCTCTGGATCCAGTGGGGATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCTAAGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV2-28*01 | null | IGKJ1*01 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCTAAGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCTNNGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPKTFGQGTKVEIK | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPXTFGQGTKVEIK | 1 | 300 | null | null | 303 | 337 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCT | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTP | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCT | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTP | null | null | null | null | GACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGT | DIVMTQSPLSLPVTPGEPASISCRSS | CAGAGCCTCCTGCATAGTAATGGATACAACTAT | QSLLHSNGYNY | TTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTAT | LDWYLQKPGQSPQLLIY | TTGGGTTCT | LGS | AATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGC | NRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | ATGCAAGCTCTACAAACTCCTAAGACG | MQALQTPKT | TGCATGCAAGCTCTACAAACTCCTAAGACGTTC | 33.0 | CMQALQTPKTF | 11.0 | 469.27 | null | 67.981 | 90S300M173S2N | null | 392S3N35M136S | 3.574e-134 | null | 1.881e-15 | 100.0 | null | 100.0 | 91 | 390 | 1 | 300 | null | null | null | null | 393 | 427 | 4 | 38 | 91 | 168 | 169 | 201 | 202 | 252 | 253 | 261 | 262 | 369 | 397.0 | 426.0 | 370.0 | 396.0 | AA | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'L', '10 ': 'S', '11 ': 'L', '12 ': 'P', '13 ': 'V', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'P', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'L', '30 ': 'L', '31 ': 'H', '32 ': 'S', '34 ': 'N', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'D', '41 ': 'W', '42 ': 'Y', '43 ': 'L', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'Q', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'L', '57 ': 'G', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'K', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'G', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'M', '106 ': 'Q', '107 ': 'A', '108 ': 'L', '109 ': 'Q', '114 ': 'T', '115 ': 'P', '116 ': 'K', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGATGAGCGGCTTC-1_contig_1 | ATCACATAACAACCACATTCCTCCTCTAAAGAAGCCCCTGGGAGCACAGCTCATCACCATGGACTGGACCTGGAGGTTCCTCTTTGTGGTGGCAGCAGCTACAGGTGTCCAGTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGATCTTCAGACTGATTACTATGATAGTAGTGGTTATTCCCTACCTCCTCACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-69*01 | IGHD3-22*01 | IGHJ4*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGATCTTCAGACTGATTACTATGATAGTAGTGGTTATTCCCTACCTCCTCACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGANNNNNNNNNNNATTACTATGATAGTAGTGGTTATTNNNNNNNNNNNNACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARDLQTDYYDSSGYSLPPHFDYWGQGTLVTVSS | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARXXXXXYYDSSGYXXXXXFDYWGQGTLVTVSS | 1 | 296 | 308.0 | 331.0 | 344 | 388 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCAR | ATTACTATGATAGTAGTGGTTATT | YYDSSGY | ATTACTATGATAGTAGTGGTTATT | YYDSSGY | ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGSSVKVSCKAS | GGAGGCACCTTCAGCAGCTATGCT | GGTFSSYA | ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGG | ISWVRQAPGQGLEWMGG | ATCATCCCTATCTTTGGTACAGCA | IIPIFGTA | AACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | NYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGATCTTCAGACTGATTACTATGATAGTAGTGGTTATTCCCTACCTCCTCACTTTGACTAC | ARDLQTDYYDSSGYSLPPHFDY | TGTGCGAGAGATCTTCAGACTGATTACTATGATAGTAGTGGTTATTCCCTACCTCCTCACTTTGACTACTGG | 72.0 | CARDLQTDYYDSSGYSLPPHFDYW | 24.0 | 463.037 | 46.832 | 87.208 | 115S296M163S | 422S2N24M128S5N | 458S3N45M71S | 2.727e-132 | 2.053e-09 | 3.127e-21 | 100.0 | 100.0 | 100.0 | 116 | 411 | 1 | 296 | 423.0 | 446.0 | 3.0 | 26.0 | 459 | 503 | 4 | 48 | 116 | 190 | 191 | 214 | 215 | 265 | 266 | 289 | 290 | 403 | 470.0 | 502.0 | 404.0 | 469.0 | TCTTCAGACTG | 11 | CCCTACCTCCTC | 12.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'S', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'I', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'G'}, 'cdrh2': {'56 ': 'I', '57 ': 'I', '58 ': 'P', '59 ': 'I', '62 ': 'F', '63 ': 'G', '64 ': 'T', '65 ': 'A'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'A', '81 ': 'D', '82 ': 'E', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'L', '109 ': 'Q', '110 ': 'T', '111 ': 'D', '111A': 'Y', '111B': 'Y', '111C': 'D', '111D': 'S', '112E': 'S', '112D': 'G', '112C': 'Y', '112B': 'S', '112A': 'L', '112 ': 'P', '113 ': 'P', '114 ': 'H', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGATGAGCGGCTTC-1_contig_2 | GGGAGAGCCCTGGGGAGGAACTGCTCAGTTAGGACCCAGAGGGAACCATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCCCCTACCTTCGGCCAAGGGACACGACTGGAGATTAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-11*01 | null | IGKJ5*01 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCCCCTACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCCNACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPPTFGQGTRLEIK | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPPTFGQGTRLEIK | 1 | 287 | null | null | 289 | 322 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCCCC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPP | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPP | null | null | null | null | ACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | TFGQGTRLEIK | ACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | TFGQGTRLEIK | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPATLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCTAC | QSVSSY | TTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GATGCATCC | DAS | AACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGT | NRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYC | TTCGGCCAAGGGACACGACTGGAGATTAAA | FGQGTRLEIK | CAGCAGCGTAGCAACTGGCCCCCTACC | QQRSNWPPT | TGTCAGCAGCGTAGCAACTGGCCCCCTACCTTC | 33.0 | CQQRSNWPPTF | 11.0 | 445.898 | null | 66.059 | 107S287M171S | null | 395S4N34M136S | 3.894e-127 | null | 7.158e-15 | 99.652 | null | 100.0 | 108 | 394 | 1 | 287 | null | null | null | null | 396 | 429 | 5 | 38 | 108 | 185 | 186 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 399.0 | 428.0 | 372.0 | 398.0 | T | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'R', '108 ': 'S', '109 ': 'N', '114 ': 'W', '115 ': 'P', '116 ': 'P', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'R', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGATGAGCTAGCCC-1_contig_1 | AGCTCTGAGAGAGGAGCCTTAGCCCTGGATTCCAAGGCCTATCCACTTGGTGATCAGCACTGAGCACCGAGGATTCACCATGGAACTGGGGCTCCGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGACCTACCCCCTAAAGTGGCTGGTACGTTACGTCGATTCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-21*01 | IGHD6-19*01 | IGHJ6*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGACCTACCCCCTAAAGTGGCTGGTACGTTACGTCGATTCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGANNNNNNNNNNNNAGTGGCTGGTACNNNNNNNNNNNNCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDLPPKVAGTLRRFYYYGMDVWGQGTTVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARXXXXXVAGTXXXXYYYGMDVWGQGTTVTVSS | 1 | 296 | 309.0 | 320.0 | 333 | 387 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | AGTGGCTGGTAC | VAGT | AGTGGCTGGTAC | VAGT | CTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | CTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACCTTCAGTAGCTATAGC | GFTFSSYS | ATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCC | MNWVRQAPGKGLEWVSS | ATTAGTAGTAGTAGTAGTTACATA | ISSSSSYI | TACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGACCTACCCCCTAAAGTGGCTGGTACGTTACGTCGATTCTACTACTACGGTATGGACGTC | ARDLPPKVAGTLRRFYYYGMDV | TGTGCGAGAGACCTACCCCCTAAAGTGGCTGGTACGTTACGTCGATTCTACTACTACGGTATGGACGTCTGG | 72.0 | CARDLPPKVAGTLRRFYYYGMDVW | 24.0 | 463.037 | 23.76 | 106.435 | 136S296M163S | 444S9N12M139S | 468S7N55M72S | 2.832e-132 | 0.01878 | 5.287e-27 | 100.0 | 100.0 | 100.0 | 137 | 432 | 1 | 296 | 445.0 | 456.0 | 10.0 | 21.0 | 469 | 523 | 8 | 62 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 491.0 | 523.0 | 425.0 | 490.0 | CCTACCCCCTAA | 12 | GTTACGTCGATT | 12.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'S'}, 'fwh2': {'39 ': 'M', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'S', '59 ': 'S', '62 ': 'S', '63 ': 'S', '64 ': 'Y', '65 ': 'I'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'L', '109 ': 'P', '110 ': 'P', '111 ': 'K', '111A': 'V', '111B': 'A', '111C': 'G', '111D': 'T', '112E': 'L', '112D': 'R', '112C': 'R', '112B': 'F', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGATGAGCTAGCCC-1_contig_2 | TGGGGGGATCAGGACTCCTCAGTTCACCTTCTCACAATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCTCTGGATCCAGTGGGGATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCTCGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV2-28*01 | null | IGKJ1*01 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCTCGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCTCGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPRTFGQGTKVEIK | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPRTFGQGTKVEIK | 1 | 301 | null | null | 302 | 337 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCTC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTP | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCTC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTP | null | null | null | null | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGT | DIVMTQSPLSLPVTPGEPASISCRSS | CAGAGCCTCCTGCATAGTAATGGATACAACTAT | QSLLHSNGYNY | TTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTAT | LDWYLQKPGQSPQLLIY | TTGGGTTCT | LGS | AATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGC | NRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | ATGCAAGCTCTACAAACTCCTCGGACG | MQALQTPRT | TGCATGCAAGCTCTACAAACTCCTCGGACGTTC | 33.0 | CMQALQTPRTF | 11.0 | 470.828 | null | 69.904 | 96S301M172S1N | null | 397S2N36M136S | 1.2269999999999999e-134 | null | 5.016e-16 | 100.0 | null | 100.0 | 97 | 397 | 1 | 301 | null | null | null | null | 398 | 433 | 3 | 38 | 97 | 174 | 175 | 207 | 208 | 258 | 259 | 267 | 268 | 375 | 403.0 | 432.0 | 376.0 | 402.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'L', '10 ': 'S', '11 ': 'L', '12 ': 'P', '13 ': 'V', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'P', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'L', '30 ': 'L', '31 ': 'H', '32 ': 'S', '34 ': 'N', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'D', '41 ': 'W', '42 ': 'Y', '43 ': 'L', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'Q', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'L', '57 ': 'G', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'K', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'G', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'M', '106 ': 'Q', '107 ': 'A', '108 ': 'L', '109 ': 'Q', '114 ': 'T', '115 ': 'P', '116 ': 'R', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGATGCAATGAATG-1_contig_1 | AGCTCTCAGAGAGGTGCCTTAGCCCTGGATTCCAAGGCATTTCCACTTGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTGGGGCTGTGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTAGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTGTGTATTACTGTGCGAGAGATCGGCCTATGGTTGGGGAGAACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-48*02 | IGHD3-10*01 | IGHJ6*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTAGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTGTGTATTACTGTGCGAGAGATCGGCCTATGGTTGGGGAGAACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTAGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTGTGTATTACTGTGCGAGAGANNNNNCTATGGTTCGGGNNNACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSYISSSSSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRDEDTAVYYCARDRPMVGENYYYGMDVWGQGTTVTVSS | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSYISSSSSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRDEDTAVYYCARXXXMVRXXYYYGMDVWGQGTTVTVSS | 1 | 296 | 302.0 | 313.0 | 317 | 372 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTAGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTGTGTATTACTGTGCGAGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSYISSSSSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRDEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTAGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTGTGTATTACTGTGCGAGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSYISSSSSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRDEDTAVYYCAR | CTATGGTTGGGG | MVG | CTATGGTTCGGG | MVR | ACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | ACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGGSLRLSCAAS | GGATTCACCTTCAGTAGCTATAGC | GFTFSSYS | ATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATAC | MNWVRQAPGKGLEWVSY | ATTAGTAGTAGTAGTAGTACCATA | ISSSSSTI | TACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNAKNSLYLQMNSLRDEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGATCGGCCTATGGTTGGGGAGAACTACTACTACGGTATGGACGTC | ARDRPMVGENYYYGMDV | TGTGCGAGAGATCGGCCTATGGTTGGGGAGAACTACTACTACGGTATGGACGTCTGG | 57.0 | CARDRPMVGENYYYGMDVW | 19.0 | 463.037 | 17.992 | 108.358 | 136S296M148S | 437S6N12M131S13N | 452S6N56M72S | 2.757e-132 | 0.9973 | 1.359e-27 | 100.0 | 91.667 | 100.0 | 137 | 432 | 1 | 296 | 438.0 | 449.0 | 7.0 | 18.0 | 453 | 508 | 7 | 62 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 476.0 | 508.0 | 425.0 | 475.0 | TCGGC | 5 | AGA | 3.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'S'}, 'fwh2': {'39 ': 'M', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'S', '59 ': 'S', '62 ': 'S', '63 ': 'S', '64 ': 'T', '65 ': 'I'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'D', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'R', '109 ': 'P', '110 ': 'M', '111 ': 'V', '111A': 'G', '111B': 'E', '112B': 'N', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGATGCAATGAATG-1_contig_2 | CTGGGGGATCAGGACTCCTCAGTTCACCTTCTCACAATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCTCTGGATCCAGTGGGGATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCACCCGAAGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV2-28*01 | null | IGKJ2*01 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCACCCGAAGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCNNNNNNNGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTHPKYTFGQGTKLEIK | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTXXXYTFGQGTKLEIK | 1 | 298 | null | null | 306 | 343 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQT | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQT | null | null | null | null | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGT | DIVMTQSPLSLPVTPGEPASISCRSS | CAGAGCCTCCTGCATAGTAATGGATACAACTAT | QSLLHSNGYNY | TTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTAT | LDWYLQKPGQSPQLLIY | TTGGGTTCT | LGS | AATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGC | NRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | ATGCAAGCTCTACAAACTCACCCGAAGTACACT | MQALQTHPKYT | TGCATGCAAGCTCTACAAACTCACCCGAAGTACACTTTT | 39.0 | CMQALQTHPKYTF | 13.0 | 466.153 | null | 73.749 | 96S298M181S4N | null | 401S1N38M136S | 3.151e-133 | null | 3.527e-17 | 100.0 | null | 100.0 | 97 | 394 | 1 | 298 | null | null | null | null | 402 | 439 | 2 | 39 | 97 | 174 | 175 | 207 | 208 | 258 | 259 | 267 | 268 | 375 | 409.0 | 438.0 | 376.0 | 408.0 | ACCCGAA | 7 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'L', '10 ': 'S', '11 ': 'L', '12 ': 'P', '13 ': 'V', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'P', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'L', '30 ': 'L', '31 ': 'H', '32 ': 'S', '34 ': 'N', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'D', '41 ': 'W', '42 ': 'Y', '43 ': 'L', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'Q', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'L', '57 ': 'G', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'K', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'G', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'M', '106 ': 'Q', '107 ': 'A', '108 ': 'L', '109 ': 'Q', '110 ': 'T', '113 ': 'H', '114 ': 'P', '115 ': 'K', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGATGCACGAAACG-1_contig_1 | TGGGGATGCTTTCTGAGAGTCATGGATCTCATGTGCAAGAAAATGAAGCACCTGTGGTTCTTCCTCCTGCTGGTGGCGGCTCCCAGATGGGTCCTGTCCCAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGAGGAGAGTATTACTATGATAGTAGTGGTTATTACGGGAGCTTGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-39*01 | IGHD3-22*01 | IGHJ4*02 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGAGGAGAGTATTACTATGATAGTAGTGGTTATTACGGGAGCTTGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGANNNNNGTATTACTATGATAGTAGTGGTTATTACNNNNNCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGEYYYDSSGYYGSLDYWGQGTLVTVSS | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXYYYDSSGYYXXFDYWGQGTLVTVSS | 1 | 297 | 303.0 | 330.0 | 336 | 379 | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGA | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGA | QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | GTATTACTATGATAGTAGTGGTTATTAC | YYYDSSGYY | GTATTACTATGATAGTAGTGGTTATTAC | YYYDSSGYY | CTTGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | LDYWGQGTLVTVSS | CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QLQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGCAGTAGTAGTTACTAC | GGSISSSSYY | TGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGT | WGWIRQPPGKGLEWIGS | ATCTATTATAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGGAGAGTATTACTATGATAGTAGTGGTTATTACGGGAGCTTGGACTAC | ARGEYYYDSSGYYGSLDY | TGTGCGAGAGGAGAGTATTACTATGATAGTAGTGGTTATTACGGGAGCTTGGACTACTGG | 60.0 | CARGEYYYDSSGYYGSLDYW | 20.0 | 464.595 | 54.523 | 79.518 | 99S297M153S2N | 401S28M120S3N | 434S4N44M71S | 8.887e-133 | 9.498e-12 | 6.174e-19 | 100.0 | 100.0 | 97.727 | 100 | 396 | 1 | 297 | 402.0 | 429.0 | 1.0 | 28.0 | 435 | 478 | 5 | 48 | 100 | 174 | 175 | 204 | 205 | 255 | 256 | 276 | 277 | 390 | 445.0 | 477.0 | 391.0 | 444.0 | GGAGA | 5 | GGGAG | 5.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'L', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'G', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'E', '109 ': 'Y', '110 ': 'Y', '111 ': 'Y', '111A': 'D', '111B': 'S', '112C': 'S', '112B': 'G', '112A': 'Y', '112 ': 'Y', '113 ': 'G', '114 ': 'S', '115 ': 'L', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGATGCACGAAACG-1_contig_2 | GGGGAGGAGTCAGTCCCAACCAGGACACAGCATGGACATGAGGGTCCCTGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCTCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCTCCGGGGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-33*01 | null | IGKJ4*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCTCCGGGGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCTCCNNNGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPPGLTFGGGTKVEIK | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPPXLTFGGGTKVEIK | 1 | 287 | null | null | 291 | 328 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCTCC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCTCC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPP | null | null | null | null | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGT | DIQMTQSPSSLSASVGDRVTITCQAS | CAGGACATTAGCAACTAT | QDISNY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAC | LNWYQQKPGKAPKLLIY | GATGCATCC | DAS | AATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGT | NLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAACAGTATGATAATCTCCCTCCGGGGCTCACT | QQYDNLPPGLT | TGTCAACAGTATGATAATCTCCCTCCGGGGCTCACTTTC | 39.0 | CQQYDNLPPGLTF | 13.0 | 449.014 | null | 73.749 | 97S287M177S | null | 387S38M136S | 4.4570000000000006e-128 | null | 3.44e-17 | 100.0 | null | 100.0 | 98 | 384 | 1 | 287 | null | null | null | null | 388 | 425 | 1 | 38 | 98 | 175 | 176 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 395.0 | 424.0 | 362.0 | 394.0 | GGG | 3 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'Q', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'D', '29 ': 'I', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'L', '68 ': 'E', '69 ': 'T', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'F', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'I', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'D', '109 ': 'N', '110 ': 'L', '113 ': 'P', '114 ': 'P', '115 ': 'G', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGATGCACGCGAAA-1_contig_1 | GAGCTCTGGGAGAGGAGCCCAGCACTAGAAGTCGGCGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGAAAGCGTTGCGTATTACTATGATAGTAGTGGTACTGACGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30*18 | IGHD3-22*01 | IGHJ4*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGAAAGCGTTGCGTATTACTATGATAGTAGTGGTACTGACGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGANNNNNNNNNGTATTACTATGATAGTAGTGGTNNNNNNNNCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKESVAYYYDSSGTDGFDYWGQGTLVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXXXYYYDSSGXXXFDYWGQGTLVTVSS | 1 | 296 | 306.0 | 327.0 | 336 | 379 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GTATTACTATGATAGTAGTGGT | YYYDSSG | GTATTACTATGATAGTAGTGGT | YYYDSSG | CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGGC | GFTFSSYG | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGTAATAAA | ISYDGSNK | TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAAAGAAAGCGTTGCGTATTACTATGATAGTAGTGGTACTGACGGCTTTGACTAC | AKESVAYYYDSSGTDGFDY | TGTGCGAAAGAAAGCGTTGCGTATTACTATGATAGTAGTGGTACTGACGGCTTTGACTACTGG | 63.0 | CAKESVAYYYDSSGTDGFDYW | 21.0 | 463.037 | 42.986 | 85.286 | 137S296M154S | 442S22M123S9N | 472S4N44M71S | 2.7920000000000002e-132 | 3.019e-08 | 1.213e-20 | 100.0 | 100.0 | 100.0 | 138 | 433 | 1 | 296 | 443.0 | 464.0 | 1.0 | 22.0 | 473 | 516 | 5 | 48 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 483.0 | 515.0 | 426.0 | 482.0 | AAGCGTTGC | 9 | ACTGACGG | 8.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'E', '108 ': 'S', '109 ': 'V', '110 ': 'A', '111 ': 'Y', '111A': 'Y', '111B': 'Y', '111C': 'D', '112C': 'S', '112B': 'S', '112A': 'G', '112 ': 'T', '113 ': 'D', '114 ': 'G', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGATGCACGCGAAA-1_contig_2 | TGGGGGCTGTGGGTCCAGGAGGCAGAACTCTGGGTGTCTCACCATGGCCTGGATCCCTCTACTTCTCCCCCTCCTCACTCTCTGCACAGGCTCTGAGGCCTCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTATGAGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-25*03 | null | IGLJ2*01 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTATGAGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTATNNGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTYEVFGGGTKLTVL | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTYXVFGGGTKLTVL | 1 | 288 | null | null | 291 | 325 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTAT | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTY | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTAT | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTY | null | null | null | null | GGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTARITCSGD | GCATTGCCAAAGCAATAT | ALPKQY | GCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATAT | AYWYQQKPGQAPVLVIY | AAAGACAGT | KDS | GAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGT | ERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAATCAGCAGACAGCAGTGGTACTTATGAGGTA | QSADSSGTYEV | TGTCAATCAGCAGACAGCAGTGGTACTTATGAGGTATTC | 39.0 | CQSADSSGTYEVF | 13.0 | 450.572 | null | 67.981 | 100S288M248S2N | null | 390S3N35M211S | 1.7170000000000002e-128 | null | 2.13e-15 | 100.0 | null | 100.0 | 101 | 388 | 1 | 288 | null | null | null | null | 391 | 425 | 4 | 38 | 101 | 175 | 176 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 395.0 | 424.0 | 362.0 | 394.0 | GA | 2 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'A', '28 ': 'L', '29 ': 'P', '36 ': 'K', '37 ': 'Q', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'Y', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'K', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'E', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'S', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'T', '87 ': 'V', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'V', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'S', '107 ': 'A', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'G', '114 ': 'T', '115 ': 'Y', '116 ': 'E', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGATGCACGGCCAT-1_contig_1 | ATCACATAACAACCACATTCCTCCTCTAAAGAAGCCCCTGGGAGCACAGCTCATCACCATGGACTGGACCTGGAGGTTCCTCTTTGTGGTGGCAGCAGCTACAGGTGTCCAGTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGCGGACTTGAATGGTACCCTAAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-69*01 | IGHD2-8*01 | IGHJ4*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGCGGACTTGAATGGTACCCTAAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGNNNNNNNNAATGGTNNNNNNNACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARADLNGTLNFDYWGQGTLVTVSS | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARXXXNGXXXFDYWGQGTLVTVSS | 1 | 295 | 304.0 | 309.0 | 317 | 361 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCAR | AATGGT | NG | AATGGT | NG | ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGSSVKVSCKAS | GGAGGCACCTTCAGCAGCTATGCT | GGTFSSYA | ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGG | ISWVRQAPGQGLEWMGG | ATCATCCCTATCTTTGGTACAGCA | IIPIFGTA | AACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | NYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGCGGACTTGAATGGTACCCTAAACTTTGACTAC | ARADLNGTLNFDY | TGTGCGAGAGCGGACTTGAATGGTACCCTAAACTTTGACTACTGG | 45.0 | CARADLNGTLNFDYW | 15.0 | 461.479 | 12.223 | 87.208 | 115S295M137S1N | 418S13N6M123S12N | 431S3N45M71S | 7.677000000000001e-132 | 51.2 | 2.977e-21 | 100.0 | 100.0 | 100.0 | 116 | 410 | 1 | 295 | 419.0 | 424.0 | 14.0 | 19.0 | 432 | 476 | 4 | 48 | 116 | 190 | 191 | 214 | 215 | 265 | 266 | 289 | 290 | 403 | 443.0 | 475.0 | 404.0 | 442.0 | CGGACTTG | 8 | ACCCTAA | 7.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'S', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'I', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'G'}, 'cdrh2': {'56 ': 'I', '57 ': 'I', '58 ': 'P', '59 ': 'I', '62 ': 'F', '63 ': 'G', '64 ': 'T', '65 ': 'A'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'A', '81 ': 'D', '82 ': 'E', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'A', '108 ': 'D', '109 ': 'L', '110 ': 'N', '111 ': 'G', '112 ': 'T', '113 ': 'L', '114 ': 'N', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGATGCACGGCCAT-1_contig_2 | TTGGGGGATCAGGACTCCTCAGTTCACCTTCTCACAATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCTCTGGATCCAGTGGGGATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV2-28*01 | null | IGKJ1*01 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPTFGQGTKVEIK | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPTFGQGTKVEIK | 1 | 299 | null | null | 300 | 334 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTP | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTP | null | null | null | null | GACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGT | DIVMTQSPLSLPVTPGEPASISCRSS | CAGAGCCTCCTGCATAGTAATGGATACAACTAT | QSLLHSNGYNY | TTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTAT | LDWYLQKPGQSPQLLIY | TTGGGTTCT | LGS | AATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGC | NRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | ATGCAAGCTCTACAAACTCCGACG | MQALQTPT | TGCATGCAAGCTCTACAAACTCCGACGTTC | 30.0 | CMQALQTPTF | 10.0 | 467.712 | null | 67.981 | 96S299M171S3N | null | 395S3N35M136S | 1.0579999999999999e-133 | null | 1.891e-15 | 100.0 | null | 100.0 | 97 | 395 | 1 | 299 | null | null | null | null | 396 | 430 | 4 | 38 | 97 | 174 | 175 | 207 | 208 | 258 | 259 | 267 | 268 | 375 | 400.0 | 429.0 | 376.0 | 399.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'L', '10 ': 'S', '11 ': 'L', '12 ': 'P', '13 ': 'V', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'P', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'L', '30 ': 'L', '31 ': 'H', '32 ': 'S', '34 ': 'N', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'D', '41 ': 'W', '42 ': 'Y', '43 ': 'L', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'Q', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'L', '57 ': 'G', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'K', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'G', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'M', '106 ': 'Q', '107 ': 'A', '108 ': 'L', '114 ': 'Q', '115 ': 'T', '116 ': 'P', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGATGCAGACTCGC-1_contig_2 | GGGATCACACAACAGCCACATCCCTCCCCTACAGAAGCCCCCAGAGCGCAGCACCTCACCATGGACTGCACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCTACAGGCACCCACGCCCAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCAGCAAGCGTAAAGTGGCTACGATTTCGCAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-24*01 | IGHD5-12*01 | IGHJ4*02 | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCAGCAAGCGTAAAGTGGCTACGATTTCGCAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCAACANNNNNNNAGTGGCTACGATTNNNNNACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCAASVKWLRFRNWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCATXXXWLRXXXWGQGTLVTVSS | 1 | 294 | 302.0 | 314.0 | 320 | 355 | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCAGCA | QVQLVQSGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCAA | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCAACA | QVQLVQSGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCAT | AGTGGCTACGATT | WLR | AGTGGCTACGATT | WLR | ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WGQGTLVTVSS | ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WGQGTLVTVSS | CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCC | QVQLVQSGAEVKKPGASVKVSCKVS | GGATACACCCTCACTGAATTATCC | GYTLTELS | ATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGT | MHWVRQAPGKGLEWMGG | TTTGATCCTGAAGATGGTGAAACA | FDPEDGET | ATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | IYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCAGCAAGCGTAAAGTGGCTACGATTTCGCAAC | AASVKWLRFRN | TGTGCAGCAAGCGTAAAGTGGCTACGATTTCGCAACTGG | 39.0 | CAASVKWLRFRNW | 13.0 | 456.805 | 25.682 | 69.904 | 117S294M132S2N | 418S8N13M112S2N | 436S12N36M71S | 1.945e-130 | 0.004514 | 4.782e-16 | 99.66 | 100.0 | 100.0 | 118 | 411 | 1 | 294 | 419.0 | 431.0 | 9.0 | 21.0 | 437 | 472 | 13 | 48 | 118 | 192 | 193 | 216 | 217 | 267 | 268 | 291 | 292 | 405 | 439.0 | 471.0 | 406.0 | 438.0 | AGCGTAA | 7 | TCGCA | 5.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'L', '35 ': 'T', '36 ': 'E', '37 ': 'L', '38 ': 'S'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'G'}, 'cdrh2': {'56 ': 'F', '57 ': 'D', '58 ': 'P', '59 ': 'E', '62 ': 'D', '63 ': 'G', '64 ': 'E', '65 ': 'T'}, 'fwh3': {'66 ': 'I', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'E', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'T', '85 ': 'D', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'A', '107 ': 'S', '108 ': 'V', '109 ': 'K', '110 ': 'W', '113 ': 'L', '114 ': 'R', '115 ': 'F', '116 ': 'R', '117 ': 'N'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGATGCAGACTCGC-1_contig_1 | AGGAGTCAGTCCCAACCAGGACACAGCATGGACATGAGGGTCCCTGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCTCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCCTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-33*01 | null | IGKJ1*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCCTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCNTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPWTFGQGTKVEIK | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPWTFGQGTKVEIK | 1 | 284 | null | null | 286 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLP | null | null | null | null | TGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | TGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGT | DIQMTQSPSSLSASVGDRVTITCQAS | CAGGACATTAGCAACTAT | QDISNY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAC | LNWYQQKPGKAPKLLIY | GATGCATCC | DAS | AATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGT | NLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAACAGTATGATAATCTCCCCTGGACG | QQYDNLPWT | TGTCAACAGTATGATAATCTCCCCTGGACGTTC | 33.0 | CQQYDNLPWTF | 11.0 | 444.34 | null | 71.827 | 93S284M174S3N | null | 378S1N37M136S | 1.117e-126 | null | 1.28e-16 | 100.0 | null | 100.0 | 94 | 377 | 1 | 284 | null | null | null | null | 379 | 415 | 2 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 385.0 | 414.0 | 358.0 | 384.0 | C | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'Q', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'D', '29 ': 'I', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'L', '68 ': 'E', '69 ': 'T', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'F', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'I', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'D', '109 ': 'N', '114 ': 'L', '115 ': 'P', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGATGGTAGATTAG-1_contig_2 | AGCTCTCAGAGAGGTGCCTTAGCCCTGGATTCCAAGGCATTTCCACTTGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTGGGGCTGTGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTAGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTGTGTATTACTGTGCGAGATCTTATTGTAGTAGTACCAGCTGCTATCCCCCCCTTTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-48*02 | IGHD2-2*01 | IGHJ6*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTAGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTGTGTATTACTGTGCGAGATCTTATTGTAGTAGTACCAGCTGCTATCCCCCCCTTTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTAGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTGTGTATTACTGTGCGAGANNNTATTGTAGTAGTACCAGCTGCTATNNNNNNNNNTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSYISSSSSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRDEDTAVYYCARSYCSSTSCYPPLYYYGMDVWGQGTTVTVSS | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSYISSSSSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRDEDTAVYYCARXYCSSTSCYXXXYYYGMDVWGQGTTVTVSS | 1 | 294 | 298.0 | 321.0 | 331 | 384 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTAGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTGTGTATTACTGTGCGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSYISSSSSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRDEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTAGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTGTGTATTACTGTGCGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSYISSSSSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRDEDTAVYYCAR | TATTGTAGTAGTACCAGCTGCTAT | YCSSTSCY | TATTGTAGTAGTACCAGCTGCTAT | YCSSTSCY | TACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | TACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGGSLRLSCAAS | GGATTCACCTTCAGTAGCTATAGC | GFTFSSYS | ATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATAC | MNWVRQAPGKGLEWVSY | ATTAGTAGTAGTAGTAGTACCATA | ISSSSSTI | TACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNAKNSLYLQMNSLRDEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGATCTTATTGTAGTAGTACCAGCTGCTATCCCCCCCTTTACTACTACGGTATGGACGTC | ARSYCSSTSCYPPLYYYGMDV | TGTGCGAGATCTTATTGTAGTAGTACCAGCTGCTATCCCCCCCTTTACTACTACGGTATGGACGTCTGG | 69.0 | CARSYCSSTSCYPPLYYYGMDVW | 23.0 | 459.921 | 46.832 | 104.513 | 136S294M162S2N | 433S4N24M135S3N | 466S8N54M72S | 2.4430000000000004e-131 | 2.119e-09 | 1.9940000000000002e-26 | 100.0 | 100.0 | 100.0 | 137 | 430 | 1 | 294 | 434.0 | 457.0 | 5.0 | 28.0 | 467 | 520 | 9 | 62 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 488.0 | 520.0 | 425.0 | 487.0 | TCT | 3 | CCCCCCCTT | 9.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'S'}, 'fwh2': {'39 ': 'M', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'S', '59 ': 'S', '62 ': 'S', '63 ': 'S', '64 ': 'T', '65 ': 'I'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'D', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'S', '108 ': 'Y', '109 ': 'C', '110 ': 'S', '111 ': 'S', '111A': 'T', '111B': 'S', '111C': 'C', '111D': 'Y', '112D': 'P', '112C': 'P', '112B': 'L', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGATGGTAGATTAG-1_contig_1 | AGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAAATGTGACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCCGTACTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-5*03 | null | IGKJ1*01 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCCGTACTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCCNNNNTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSPYWTFGQGTKVEIK | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSPXWTFGQGTKVEIK | 1 | 287 | null | null | 292 | 328 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSP | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCTCC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSP | null | null | null | null | TGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | TGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQMTQSPSTLSASVGDRVTITCRAS | CAGAGTATTAGTAGCTGG | QSISSW | TTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | AAGGCGTCT | KAS | AGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGC | SLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAACAGTATAATAGTTATTCTCCGTACTGGACG | QQYNSYSPYWT | TGCCAACAGTATAATAGTTATTCTCCGTACTGGACGTTC | 39.0 | CQQYNSYSPYWTF | 13.0 | 449.014 | null | 71.827 | 93S287M177S | null | 384S1N37M136S | 4.4230000000000005e-128 | null | 1.295e-16 | 100.0 | null | 100.0 | 94 | 380 | 1 | 287 | null | null | null | null | 385 | 421 | 2 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 391.0 | 420.0 | 358.0 | 390.0 | GTAC | 4 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'W'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'K', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'D', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'S', '110 ': 'Y', '113 ': 'S', '114 ': 'P', '115 ': 'Y', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGATGGTCAGATAA-1_contig_1 | CGAGCCCAGCACTGGAAGTCGCCGGTGTTTCCATTCGGTGATCATCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGCTGGGGTCTGGCCACGTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30-3*01 | IGHD7-27*01 | IGHJ4*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGCTGGGGTCTGGCCACGTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGCTGGGGNNNNNNNNNNNACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCASWGLATYYFDYWGQGTLVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCASWGXXXXYFDYWGQGTLVTVSS | 1 | 293 | 294.0 | 299.0 | 311 | 358 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | CTGGGG | WG | CTGGGG | WG | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGCT | GFTFSSYA | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGCAATAAA | ISYDGSNK | TACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGCTGGGGTCTGGCCACGTACTACTTTGACTAC | ASWGLATYYFDY | TGTGCGAGCTGGGGTCTGGCCACGTACTACTTTGACTACTGG | 42.0 | CASWGLATYYFDYW | 14.0 | 458.363 | 12.223 | 92.976 | 124S293M136S3N | 417S4N6M130S1N | 434S48M71S | 6.733000000000005e-131 | 51.78 | 5.524e-23 | 100.0 | 100.0 | 100.0 | 125 | 417 | 1 | 293 | 418.0 | 423.0 | 5.0 | 10.0 | 435 | 482 | 1 | 48 | 125 | 199 | 200 | 223 | 224 | 274 | 275 | 298 | 299 | 412 | 449.0 | 481.0 | 413.0 | 448.0 | null | 0 | TCTGGCCACGT | 11.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'S', '107 ': 'W', '108 ': 'G', '109 ': 'L', '110 ': 'A', '112 ': 'T', '113 ': 'Y', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGATGGTCAGATAA-1_contig_2 | AGCTTCAGCTGTGGGTAGAGAAGACAGGACTCAGGACAATCTCCAGCATGGCCAGCTTCCCTCTCCTCCTCACCCTCCTCACTCACTGTGCAGGGTCCTGGGCCCAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-44*01 | null | IGLJ3*02 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTTGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGWVFGGGTKLTVL | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGWVFGGGTKLTVL | 1 | 294 | null | null | 295 | 331 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGT | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGT | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNG | null | null | null | null | TGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | TGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | WVFGGGTKLTVL | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGC | QSVLTQPPSASGTPGQRVTISCSGS | AGCTCCAACATCGGAAGTAATACT | SSNIGSNT | GTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTAT | VNWYQQLPGTAPKLLIY | AGTAATAAT | SNN | CAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGT | QRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | GCAGCATGGGATGACAGCCTGAATGGTTGGGTG | AAWDDSLNGWV | TGTGCAGCATGGGATGACAGCCTGAATGGTTGGGTGTTC | 39.0 | CAAWDDSLNGWVF | 13.0 | 459.921 | null | 71.827 | 104S294M248S2N | null | 398S1N37M211S | 2.6770000000000004e-131 | null | 1.506e-16 | 100.0 | null | 100.0 | 105 | 398 | 1 | 294 | null | null | null | null | 399 | 435 | 2 | 38 | 105 | 179 | 180 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 405.0 | 434.0 | 372.0 | 404.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'A', '12 ': 'S', '13 ': 'G', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'S', '37 ': 'N', '38 ': 'T'}, 'fwl2': {'39 ': 'V', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'S', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'Q', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'A', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'A', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'D', '110 ': 'S', '113 ': 'L', '114 ': 'N', '115 ': 'G', '116 ': 'W', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGATGGTCTACCTC-1_contig_2 | GGGGAGTGACTCCTGTGCCCCACCATGGACACACTTTGCTCCACGCTCCTGCTGCTGACCATCCCTTCATGGGTCTTGTCCCAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACATTACGACGTATTACTATGATAGTAGTGGTTATTATGAAACCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV2-5*02 | IGHD3-22*01 | IGHJ4*02 | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACATTACGACGTATTACTATGATAGTAGTGGTTATTATGAAACCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACANNNNNNNGTATTACTATGATAGTAGTGGTTATTANNNNNNNNNNTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAHITTYYYDSSGYYETPFDYWGQGTLVTVSS | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAHXXXYYYDSSGYXXXXFDYWGQGTLVTVSS | 1 | 298 | 306.0 | 332.0 | 343 | 385 | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACA | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAH | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACA | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAH | GTATTACTATGATAGTAGTGGTTATTA | YYYDSSGY | GTATTACTATGATAGTAGTGGTTATTA | YYYDSSGY | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCT | QITLKESGPTLVKPTQTLTLTCTFS | GGGTTCTCACTCAGCACTAGTGGAGTGGGT | GFSLSTSGVG | GTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTC | VGWIRQPPGKALEWLAL | ATTTATTGGGATGATGATAAG | IYWDDDK | CGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGT | RYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCACACATTACGACGTATTACTATGATAGTAGTGGTTATTATGAAACCCCTTTTGACTAC | AHITTYYYDSSGYYETPFDY | TGTGCACACATTACGACGTATTACTATGATAGTAGTGGTTATTATGAAACCCCTTTTGACTACTGG | 66.0 | CAHITTYYYDSSGYYETPFDYW | 22.0 | 466.153 | 52.6 | 83.363 | 81S298M158S3N | 386S27M124S4N | 423S5N43M71S | 2.9489999999999998e-133 | 3.521e-11 | 4.1990000000000005e-20 | 100.0 | 100.0 | 100.0 | 82 | 379 | 1 | 298 | 387.0 | 413.0 | 1.0 | 27.0 | 424 | 466 | 6 | 48 | 82 | 156 | 157 | 186 | 187 | 237 | 238 | 258 | 259 | 372 | 433.0 | 465.0 | 373.0 | 432.0 | TTACGAC | 7 | TGAAACCCCT | 10.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'I', '3 ': 'T', '4 ': 'L', '5 ': 'K', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'T', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'T', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'T', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'F', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'S', '30 ': 'L', '31 ': 'S', '34 ': 'T', '35 ': 'S', '36 ': 'G', '37 ': 'V', '38 ': 'G'}, 'fwh2': {'39 ': 'V', '40 ': 'G', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'L', '54 ': 'A', '55 ': 'L'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'W', '59 ': 'D', '63 ': 'D', '64 ': 'D', '65 ': 'K'}, 'fwh3': {'66 ': 'R', '67 ': 'Y', '68 ': 'S', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'L', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'K', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'V', '88 ': 'V', '89 ': 'L', '90 ': 'T', '91 ': 'M', '92 ': 'T', '93 ': 'N', '94 ': 'M', '95 ': 'D', '96 ': 'P', '97 ': 'V', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'H', '107 ': 'I', '108 ': 'T', '109 ': 'T', '110 ': 'Y', '111 ': 'Y', '111A': 'Y', '111B': 'D', '111C': 'S', '112D': 'S', '112C': 'G', '112B': 'Y', '112A': 'Y', '112 ': 'E', '113 ': 'T', '114 ': 'P', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGATGGTCTACCTC-1_contig_1 | AGCTTCAGCTGTGGGTAGAGAAGACAGGACTCAGGACAATCTCCAGCATGGCCAGCTTCCCTCTCCTCCTCACCCTCCTCACTCACTGTGCAGGGTCCTGGGCCCAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-44*01 | null | IGLJ2*01 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGVVFGGGTKLTVL | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGVVFGGGTKLTVL | 1 | 294 | null | null | 295 | 331 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGT | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGT | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNG | null | null | null | null | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGC | QSVLTQPPSASGTPGQRVTISCSGS | AGCTCCAACATCGGAAGTAATACT | SSNIGSNT | GTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTAT | VNWYQQLPGTAPKLLIY | AGTAATAAT | SNN | CAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGT | QRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | GCAGCATGGGATGACAGCCTGAATGGTGTGGTA | AAWDDSLNGVV | TGTGCAGCATGGGATGACAGCCTGAATGGTGTGGTATTC | 39.0 | CAAWDDSLNGVVF | 13.0 | 459.921 | null | 71.827 | 104S294M248S2N | null | 398S1N37M211S | 2.6770000000000004e-131 | null | 1.506e-16 | 100.0 | null | 100.0 | 105 | 398 | 1 | 294 | null | null | null | null | 399 | 435 | 2 | 38 | 105 | 179 | 180 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 405.0 | 434.0 | 372.0 | 404.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'A', '12 ': 'S', '13 ': 'G', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'S', '37 ': 'N', '38 ': 'T'}, 'fwl2': {'39 ': 'V', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'S', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'Q', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'A', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'A', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'D', '110 ': 'S', '113 ': 'L', '114 ': 'N', '115 ': 'G', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGATGGTCTCTTAT-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAGTATTACTATGATAGTAGTGGTTACTCCGGGGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD3-22*01 | IGHJ3*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAGTATTACTATGATAGTAGTGGTTACTCCGGGGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAGTATTACTATGATAGTAGTGGTTANNNNNNNGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKYYYDSSGYSGAFDIWGQGTMVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKYYYDSSGXXXAFDIWGQGTMVTVSS | 1 | 293 | 294.0 | 317.0 | 325 | 370 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | GTATTACTATGATAGTAGTGGTTA | YYYDSSG | GTATTACTATGATAGTAGTGGTTA | YYYDSSG | GCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | GCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGAAGTATTACTATGATAGTAGTGGTTACTCCGGGGCTTTTGATATC | AKYYYDSSGYSGAFDI | TGTGCGAAGTATTACTATGATAGTAGTGGTTACTCCGGGGCTTTTGATATCTGG | 54.0 | CAKYYYDSSGYSGAFDIW | 18.0 | 458.363 | 46.832 | 89.131 | 136S293M148S3N | 429S24M124S7N | 460S4N46M71S | 7.002e-131 | 2.064e-09 | 8.291999999999999e-22 | 100.0 | 100.0 | 100.0 | 137 | 429 | 1 | 293 | 430.0 | 453.0 | 1.0 | 24.0 | 461 | 506 | 5 | 50 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 473.0 | 505.0 | 425.0 | 472.0 | null | 0 | CTCCGGG | 7.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'Y', '108 ': 'Y', '109 ': 'Y', '110 ': 'D', '111 ': 'S', '111A': 'S', '112B': 'G', '112A': 'Y', '112 ': 'S', '113 ': 'G', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGATGGTCTCTTAT-1_contig_1 | AGCTTCAGCTGTGGGTAGAGAAGACAGGACTCAGGACAATCTCCAGCATGGCCAGCTTCCCTCTCCTCCTCACCCTCCTCACTCACTGTGCAGGGTCCTGGGCCCAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-44*01 | null | IGLJ2*01 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGVVFGGGTKLTVL | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGVVFGGGTKLTVL | 1 | 294 | null | null | 295 | 331 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGT | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGT | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNG | null | null | null | null | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGC | QSVLTQPPSASGTPGQRVTISCSGS | AGCTCCAACATCGGAAGTAATACT | SSNIGSNT | GTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTAT | VNWYQQLPGTAPKLLIY | AGTAATAAT | SNN | CAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGT | QRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | GCAGCATGGGATGACAGCCTGAATGGTGTGGTA | AAWDDSLNGVV | TGTGCAGCATGGGATGACAGCCTGAATGGTGTGGTATTC | 39.0 | CAAWDDSLNGVVF | 13.0 | 459.921 | null | 71.827 | 104S294M248S2N | null | 398S1N37M211S | 2.6770000000000004e-131 | null | 1.506e-16 | 100.0 | null | 100.0 | 105 | 398 | 1 | 294 | null | null | null | null | 399 | 435 | 2 | 38 | 105 | 179 | 180 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 405.0 | 434.0 | 372.0 | 404.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'A', '12 ': 'S', '13 ': 'G', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'S', '37 ': 'N', '38 ': 'T'}, 'fwl2': {'39 ': 'V', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'S', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'Q', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'A', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'A', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'D', '110 ': 'S', '113 ': 'L', '114 ': 'N', '115 ': 'G', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGATGGTTCCATGA-1_contig_1 | GATACTTTCTGAGACTCATGGACCTCCTGCACAAGAACATGAAACACCTGTGGTTCTTCCTCCTGCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGAGTTCCGATTTTTGGAGTGGTTAACCAACCGGCCCCCGTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-4*07 | IGHD3-3*01 | IGHJ6*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGAGTTCCGATTTTTGGAGTGGTTAACCAACCGGCCCCCGTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGANNNNCGATTTTTGGAGTGGTTANNNNNNNNNNNNNNNTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTMSVDTSKNQFSLKLSSVTAADTAVYYCAREFRFLEWLTNRPPYYYGMDVWGQGTTVTVSS | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTMSVDTSKNQFSLKLSSVTAADTAVYYCARXXRFLEWLXXXXXYYYGMDVWGQGTTVTVSS | 1 | 293 | 298.0 | 315.0 | 331 | 384 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTMSVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTMSVDTSKNQFSLKLSSVTAADTAVYYCAR | CGATTTTTGGAGTGGTTA | RFLEWL | CGATTTTTGGAGTGGTTA | RFLEWL | TACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | TACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGTAGTTACTAC | GGSISSYY | TGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGT | WSWIRQPAGKGLEWIGR | ATCTATACCAGTGGGAGCACC | IYTSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGT | NYNPSLKSRVTMSVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGAGTTCCGATTTTTGGAGTGGTTAACCAACCGGCCCCCGTACTACTACGGTATGGACGTC | AREFRFLEWLTNRPPYYYGMDV | TGTGCGAGAGAGTTCCGATTTTTGGAGTGGTTAACCAACCGGCCCCCGTACTACTACGGTATGGACGTCTGG | 72.0 | CAREFRFLEWLTNRPPYYYGMDVW | 24.0 | 458.363 | 35.296 | 104.513 | 95S293M163S | 392S6N18M141S7N | 425S8N54M72S | 6.708000000000005e-131 | 5.849e-06 | 1.8530000000000001e-26 | 100.0 | 100.0 | 100.0 | 96 | 388 | 1 | 293 | 393.0 | 410.0 | 7.0 | 24.0 | 426 | 479 | 9 | 62 | 96 | 170 | 171 | 194 | 195 | 245 | 246 | 266 | 267 | 380 | 447.0 | 479.0 | 381.0 | 446.0 | GTTC | 4 | ACCAACCGGCCCCCG | 15.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'A', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'T', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'E', '108 ': 'F', '109 ': 'R', '110 ': 'F', '111 ': 'L', '111A': 'E', '111B': 'W', '111C': 'L', '111D': 'T', '112E': 'N', '112D': 'R', '112C': 'P', '112B': 'P', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGATGGTTCCATGA-1_contig_2 | ATGGGGAGGAGTCAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCGTGACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ2*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCGTGACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCNNNACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTVTFGQGTKLEIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTXTFGQGTKLEIK | 1 | 282 | null | null | 286 | 319 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYST | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYST | null | null | null | null | ACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | TFGQGTKLEIK | ACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | TFGQGTKLEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAACAGAGTTACAGTACCGTGACT | QQSYSTVT | TGTCAACAGAGTTACAGTACCGTGACTTTT | 30.0 | CQQSYSTVTF | 10.0 | 441.224 | null | 66.059 | 99S282M173S5N | null | 384S5N34M136S | 9.738e-126 | null | 7.016e-15 | 100.0 | null | 100.0 | 100 | 381 | 1 | 282 | null | null | null | null | 385 | 418 | 6 | 39 | 100 | 177 | 178 | 195 | 196 | 246 | 247 | 255 | 256 | 363 | 388.0 | 417.0 | 364.0 | 387.0 | GTG | 3 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '114 ': 'S', '115 ': 'T', '116 ': 'V', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGATGTCACAGGCC-1_contig_1 | CCACATCCCTCCTCAGAAGCCCCCAGAGCACAACTCCTTACCATGGACTGGACCTGGAGGATCCTCTTTTTGGTGGCAGCAGCCACAGGTGCCCACTCCCAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGGATCAACGCTGGCAATGGTAACACAAAATATTCACAGAAGTTCCAGGGCAGAGTCACCATTACCAGGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAAGACACGGCTGTGTATTACTGTGCGAGAGATGGGTGGGACGGTGACTACGTAGCACTTGTGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-3*01 | IGHD4-17*01 | IGHJ4*02 | CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGGATCAACGCTGGCAATGGTAACACAAAATATTCACAGAAGTTCCAGGGCAGAGTCACCATTACCAGGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAAGACACGGCTGTGTATTACTGTGCGAGAGATGGGTGGGACGGTGACTACGTAGCACTTGTGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGGATCAACGCTGGCAATGGTAACACAAAATATTCACAGAAGTTCCAGGGCAGAGTCACCATTACCAGGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAAGACACGGCTGTGTATTACTGTGCGAGAGANNNNNNNNACGGTGACTACNNNNNNNNNNNNGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYCARDGWDGDYVALVDYWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYCARXXXXGDYXXXXDYWGQGTLVTVSS | 1 | 296 | 305.0 | 315.0 | 328 | 367 | CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGGATCAACGCTGGCAATGGTAACACAAAATATTCACAGAAGTTCCAGGGCAGAGTCACCATTACCAGGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAAGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYCAR | CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGGATCAACGCTGGCAATGGTAACACAAAATATTCACAGAAGTTCCAGGGCAGAGTCACCATTACCAGGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAAGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYCAR | ACGGTGACTAC | GDY | ACGGTGACTAC | GDY | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACTAGCTATGCT | GYTFTSYA | ATGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGG | MHWVRQAPGQRLEWMGW | ATCAACGCTGGCAATGGTAACACA | INAGNGNT | AAATATTCACAGAAGTTCCAGGGCAGAGTCACCATTACCAGGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAAGACACGGCTGTGTATTACTGT | KYSQKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGATGGGTGGGACGGTGACTACGTAGCACTTGTGGACTAC | ARDGWDGDYVALVDY | TGTGCGAGAGATGGGTGGGACGGTGACTACGTAGCACTTGTGGACTACTGG | 51.0 | CARDGWDGDYVALVDYW | 17.0 | 463.037 | 21.837 | 77.595 | 99S296M142S | 403S5N11M123S | 426S8N40M71S | 2.557e-132 | 0.06415 | 2.288e-18 | 100.0 | 100.0 | 100.0 | 100 | 395 | 1 | 296 | 404.0 | 414.0 | 6.0 | 16.0 | 427 | 466 | 9 | 48 | 100 | 174 | 175 | 198 | 199 | 249 | 250 | 273 | 274 | 387 | 433.0 | 465.0 | 388.0 | 432.0 | TGGGTGGG | 8 | GTAGCACTTGTG | 12.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'R', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'A', '59 ': 'G', '62 ': 'N', '63 ': 'G', '64 ': 'N', '65 ': 'T'}, 'fwh3': {'66 ': 'K', '67 ': 'Y', '68 ': 'S', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'A', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'G', '109 ': 'W', '110 ': 'D', '111 ': 'G', '111A': 'D', '112A': 'Y', '112 ': 'V', '113 ': 'A', '114 ': 'L', '115 ': 'V', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGATGTCACAGGCC-1_contig_2 | GATCAGGACTCCTCAGTTCACCTTCTCACAATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCCCAGGATCCAGTGGGGATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCGGGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV2-30*01 | null | IGKJ1*01 | GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCGGGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCCNNGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DVVMTQSPLSLPVTLGQPASISCRSSQSLVYSDGNTYLNWFQQRPGQSPRRLIYKVSNRDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGTHWPGTFGQGTKVEIK | DVVMTQSPLSLPVTLGQPASISCRSSQSLVYSDGNTYLNWFQQRPGQSPRRLIYKVSNRDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGTHWPXTFGQGTKVEIK | 1 | 299 | null | null | 302 | 337 | GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCC | DVVMTQSPLSLPVTLGQPASISCRSSQSLVYSDGNTYLNWFQQRPGQSPRRLIYKVSNRDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGTHWP | GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAAAGCCTCGTATACAGTGATGGAAACACCTACTTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTATAAGGTTTCTAACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGGTACACACTGGCC | DVVMTQSPLSLPVTLGQPASISCRSSQSLVYSDGNTYLNWFQQRPGQSPRRLIYKVSNRDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGTHWP | null | null | null | null | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GATGTTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCTTGGACAGCCGGCCTCCATCTCCTGCAGGTCTAGT | DVVMTQSPLSLPVTLGQPASISCRSS | CAAAGCCTCGTATACAGTGATGGAAACACCTAC | QSLVYSDGNTY | TTGAATTGGTTTCAGCAGAGGCCAGGCCAATCTCCAAGGCGCCTAATTTAT | LNWFQQRPGQSPRRLIY | AAGGTTTCT | KVS | AACCGGGACTCTGGGGTCCCAGACAGATTCAGCGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGC | NRDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | ATGCAAGGTACACACTGGCCGGGGACG | MQGTHWPGT | TGCATGCAAGGTACACACTGGCCGGGGACGTTC | 33.0 | CMQGTHWPGTF | 11.0 | 467.712 | null | 69.904 | 90S299M174S3N | null | 391S2N36M136S | 1.052e-133 | null | 4.962e-16 | 100.0 | null | 100.0 | 91 | 389 | 1 | 299 | null | null | null | null | 392 | 427 | 3 | 38 | 91 | 168 | 169 | 201 | 202 | 252 | 253 | 261 | 262 | 369 | 397.0 | 426.0 | 370.0 | 396.0 | GG | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'V', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'L', '10 ': 'S', '11 ': 'L', '12 ': 'P', '13 ': 'V', '14 ': 'T', '15 ': 'L', '16 ': 'G', '17 ': 'Q', '18 ': 'P', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'L', '30 ': 'V', '31 ': 'Y', '32 ': 'S', '34 ': 'D', '35 ': 'G', '36 ': 'N', '37 ': 'T', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'F', '43 ': 'Q', '44 ': 'Q', '45 ': 'R', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'R', '52 ': 'R', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'K', '57 ': 'V', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'D', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'K', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'G', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'M', '106 ': 'Q', '107 ': 'G', '108 ': 'T', '109 ': 'H', '114 ': 'W', '115 ': 'P', '116 ': 'G', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGATGTCATCGATG-1_contig_1 | ACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACATCTGTGGTTCTTCCTTCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGCCTGGCGTATCCCCACCATTGGCTTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-59*01 | IGHD5-12*01 | IGHJ5*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGCCTGGCGTATCCCCACCATTGGCTTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGNNNNNNNNNNNNNNNNNNNTGGCTNAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCASLAYPHHWLNWFDPWGQGTLVTVSS | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAXXXXXXXWLNWFDPWGQGTLVTVSS | 1 | 290 | 310.0 | 314.0 | 316 | 364 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | TGGCT | WL | TGGCT | WL | AACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | AACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGTAGTTACTAC | GGSISSYY | TGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTAT | WSWIRQPPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGCCTGGCGTATCCCCACCATTGGCTTAACTGGTTCGACCCC | ASLAYPHHWLNWFDP | TGTGCGAGCCTGGCGTATCCCCACCATTGGCTTAACTGGTTCGACCCCTGG | 51.0 | CASLAYPHHWLNWFDPW | 17.0 | 453.689 | 10.301 | 94.899 | 92S290M145S3N | 401S10N5M121S8N | 407S2N49M71S | 1.634e-129 | 186.9 | 1.387e-23 | 100.0 | 100.0 | 100.0 | 93 | 382 | 1 | 290 | 402.0 | 406.0 | 11.0 | 15.0 | 408 | 456 | 3 | 51 | 93 | 167 | 168 | 191 | 192 | 242 | 243 | 263 | 264 | 377 | 423.0 | 455.0 | 378.0 | 422.0 | CCTGGCGTATCCCCACCAT | 19 | T | 1.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'S', '107 ': 'L', '108 ': 'A', '109 ': 'Y', '110 ': 'P', '111 ': 'H', '111A': 'H', '112A': 'W', '112 ': 'L', '113 ': 'N', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGATGTCATCGATG-1_contig_2 | GGGAGAGCCCTGGGGAGGAACTGCTCAGTTAGGACCCAGAGGGAACCATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACGGATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-11*01 | null | IGKJ3*01 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACGGATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACNNATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNGFTFGPGTKVDIK | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNXFTFGPGTKVDIK | 1 | 279 | null | null | 282 | 319 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAAC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSN | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAAC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSN | null | null | null | null | ATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FTFGPGTKVDIK | ATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FTFGPGTKVDIK | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPATLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCTAC | QSVSSY | TTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GATGCATCC | DAS | AACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGT | NRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYC | TTCGGCCCTGGGACCAAAGTGGATATCAAA | FGPGTKVDIK | CAGCAGCGTAGCAACGGATTCACT | QQRSNGFT | TGTCAGCAGCGTAGCAACGGATTCACTTTC | 30.0 | CQQRSNGFTF | 10.0 | 436.549 | null | 73.749 | 107S279M176S8N | null | 388S38M136S | 2.524e-124 | null | 3.446e-17 | 100.0 | null | 100.0 | 108 | 386 | 1 | 279 | null | null | null | null | 389 | 426 | 1 | 38 | 108 | 185 | 186 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 396.0 | 425.0 | 372.0 | 395.0 | GG | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'R', '108 ': 'S', '114 ': 'N', '115 ': 'G', '116 ': 'F', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'P', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'D', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGATGTCCACGTGG-1_contig_1 | ACATGGGAAATACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACATCTGTGGTTCTTCCTTCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGAAATGGGCAGTGGCTGGTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-59*01 | IGHD6-19*01 | IGHJ4*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGAAATGGGCAGTGGCTGGTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGANNNNNGCAGTGGCTGGTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAREMGSGWYYFDYWGQGTLVTVSS | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXXSGWYYFDYWGQGTLVTVSS | 1 | 293 | 299.0 | 310.0 | 311 | 358 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | GCAGTGGCTGGT | SGW | GCAGTGGCTGGT | SGW | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGTAGTTACTAC | GGSISSYY | TGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTAT | WSWIRQPPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGAAATGGGCAGTGGCTGGTACTACTTTGACTAC | AREMGSGWYYFDY | TGTGCGAGAGAAATGGGCAGTGGCTGGTACTACTTTGACTACTGG | 45.0 | CAREMGSGWYYFDYW | 15.0 | 458.363 | 23.76 | 92.976 | 103S293M136S | 401S7N12M119S2N | 413S48M71S | 6.464e-131 | 0.01676 | 5.31e-23 | 100.0 | 100.0 | 100.0 | 104 | 396 | 1 | 293 | 402.0 | 413.0 | 8.0 | 19.0 | 414 | 461 | 1 | 48 | 104 | 178 | 179 | 202 | 203 | 253 | 254 | 274 | 275 | 388 | 428.0 | 460.0 | 389.0 | 427.0 | AATGG | 5 | null | 0.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'E', '108 ': 'M', '109 ': 'G', '110 ': 'S', '111 ': 'G', '112 ': 'W', '113 ': 'Y', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGATGTCCACGTGG-1_contig_2 | AGAGCTCTGGAGAAGAGCTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-20*01 | null | IGKJ2*01 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPPYTFGQGTKLEIK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPPYTFGQGTKLEIK | 1 | 290 | null | null | 291 | 328 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPP | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPP | null | null | null | null | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPGTLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCAGCTAC | QSVSSSY | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAGCAGTATGGTAGCTCACCTCCGTACACT | QQYGSSPPYT | TGTCAGCAGTATGGTAGCTCACCTCCGTACACTTTT | 36.0 | CQQYGSSPPYTF | 12.0 | 453.689 | null | 73.749 | 104S290M174S | null | 394S1N38M136S | 1.768e-129 | null | 3.483e-17 | 100.0 | null | 100.0 | 105 | 394 | 1 | 290 | null | null | null | null | 395 | 432 | 2 | 39 | 105 | 182 | 183 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 402.0 | 431.0 | 372.0 | 401.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'G', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'G', '109 ': 'S', '113 ': 'S', '114 ': 'P', '115 ': 'P', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGATGTCCTCAACC-1_contig_1 | ATCATCCAACAACCACATCCCTTCTCTACAGAAGCCTCTGAGAGGAAAGTTCTTCACCATGGACTGGACCTGGAGGGTCTTCTGCTTGCTGGCTGTAGCTCCAGGTGCTCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGATATGACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-46*01 | null | IGHJ6*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGATATGACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGANNNNACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYYMHWVRQAPGQGLEWMGIINPSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARYDYYYGMDVWGQGTTVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYYMHWVRQAPGQGLEWMGIINPSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARXXYYYGMDVWGQGTTVTVSS | 1 | 294 | null | null | 299 | 354 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYYMHWVRQAPGQGLEWMGIINPSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYYMHWVRQAPGQGLEWMGIINPSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCAR | null | null | null | null | ACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | ACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCAGCTACTAT | GYTFTSYY | ATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATA | MHWVRQAPGQGLEWMGI | ATCAACCCTAGTGGTGGTAGCACA | INPSGGST | AGCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | SYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGATATGACTACTACTACGGTATGGACGTC | ARYDYYYGMDV | TGTGCGAGATATGACTACTACTACGGTATGGACGTCTGG | 39.0 | CARYDYYYGMDVW | 13.0 | 459.921 | null | 108.358 | 115S294M132S2N | null | 413S6N56M72S | 2.2340000000000002e-131 | null | 1.2649999999999999e-27 | 100.0 | null | 100.0 | 116 | 409 | 1 | 294 | null | null | null | null | 414 | 469 | 7 | 62 | 116 | 190 | 191 | 214 | 215 | 265 | 266 | 289 | 290 | 403 | 437.0 | 469.0 | 404.0 | 436.0 | TATG | 4 | null | null | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'I'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'P', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'S', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'V', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'Y', '108 ': 'D', '109 ': 'Y', '110 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGATGTCCTCAACC-1_contig_2 | CGGGGGGATCAGGACTCCTCAGTTCACCTTCTCACAATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCTCTGGATCCAGTGGGGATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCCTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV2-28*01 | null | IGKJ1*01 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCCTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCNTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPWTFGQGTKVEIK | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPWTFGQGTKVEIK | 1 | 299 | null | null | 301 | 337 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTP | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTP | null | null | null | null | TGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | TGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGT | DIVMTQSPLSLPVTPGEPASISCRSS | CAGAGCCTCCTGCATAGTAATGGATACAACTAT | QSLLHSNGYNY | TTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTAT | LDWYLQKPGQSPQLLIY | TTGGGTTCT | LGS | AATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGC | NRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | ATGCAAGCTCTACAAACTCCCTGGACG | MQALQTPWT | TGCATGCAAGCTCTACAAACTCCCTGGACGTTC | 33.0 | CMQALQTPWTF | 11.0 | 467.712 | null | 71.827 | 96S299M174S3N | null | 396S1N37M136S | 1.064e-133 | null | 1.323e-16 | 100.0 | null | 100.0 | 97 | 395 | 1 | 299 | null | null | null | null | 397 | 433 | 2 | 38 | 97 | 174 | 175 | 207 | 208 | 258 | 259 | 267 | 268 | 375 | 403.0 | 432.0 | 376.0 | 402.0 | C | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'L', '10 ': 'S', '11 ': 'L', '12 ': 'P', '13 ': 'V', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'P', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'L', '30 ': 'L', '31 ': 'H', '32 ': 'S', '34 ': 'N', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'D', '41 ': 'W', '42 ': 'Y', '43 ': 'L', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'Q', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'L', '57 ': 'G', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'K', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'G', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'M', '106 ': 'Q', '107 ': 'A', '108 ': 'L', '109 ': 'Q', '114 ': 'T', '115 ': 'P', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGATGTCGTATCAG-1_contig_1 | TGGGGAGGGTCCTGCTCACATGGGAAATACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACACCTGTGGTTCTTCCTCCTGCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAAGGCGTGGTTTGGGGCACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-31*03 | IGHD3-16*01 | IGHJ5*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAAGGCGTGGTTTGGGGCACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGANNNNNNNGTTTGGGGNACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARRRGLGHNWFDPWGQGTLVTVSS | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXXLGXNWFDPWGQGTLVTVSS | 1 | 297 | 305.0 | 312.0 | 314 | 364 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | GTTTGGGG | LG | GTTTGGGG | LG | ACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | ACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSQTLSLTCTVS | GGTGGCTCCATCAGCAGTGGTGGTTACTAC | GGSISSGGYY | TGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTAC | WSWIRQHPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAAGGCGTGGTTTGGGGCACAACTGGTTCGACCCC | ARRRGLGHNWFDP | TGTGCGAGAAGGCGTGGTTTGGGGCACAACTGGTTCGACCCCTGG | 45.0 | CARRRGLGHNWFDPW | 15.0 | 464.595 | 16.069 | 98.744 | 120S297M138S2N | 424S13N8M123S16N | 433S51M71S | 8.989999999999999e-133 | 3.615 | 1.017e-24 | 100.0 | 100.0 | 100.0 | 121 | 417 | 1 | 297 | 425.0 | 432.0 | 14.0 | 21.0 | 434 | 484 | 1 | 51 | 121 | 195 | 196 | 225 | 226 | 276 | 277 | 297 | 298 | 411 | 451.0 | 483.0 | 412.0 | 450.0 | AGGCGTG | 7 | C | 1.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'G', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'R', '108 ': 'R', '109 ': 'G', '110 ': 'L', '111 ': 'G', '112 ': 'H', '113 ': 'N', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGATGTCGTATCAG-1_contig_2 | TGAGCGCAGAAGGCAGGACTCGGGACAATCTTCATCATGACCTGCTCCCCTCTCCTCCTCACCCTTCTCATTCACTGCACAGGGTCCTGGGCCCAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTGAGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-51*01 | null | IGLJ3*02 | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTGAGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTGNGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSAEVFGGGTKLTVL | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSAXVFGGGTKLTVL | 1 | 295 | null | null | 297 | 331 | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTG | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSA | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCTG | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSA | null | null | null | null | GGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGC | QSVLTQPPSVSAAPGQKVTISCSGS | AGCTCCAACATTGGGAATAATTAT | SSNIGNNY | GTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTAT | VSWYQQLPGTAPKLLIY | GACAATAAT | DNN | AAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGC | KRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | GGAACATGGGATAGCAGCCTGAGTGCTGAGGTG | GTWDSSLSAEV | TGCGGAACATGGGATAGCAGCCTGAGTGCTGAGGTGTTC | 39.0 | CGTWDSSLSAEVF | 13.0 | 461.479 | null | 67.981 | 93S295M247S1N | null | 389S3N35M211S | 8.93e-132 | null | 2.127e-15 | 100.0 | null | 100.0 | 94 | 388 | 1 | 295 | null | null | null | null | 390 | 424 | 4 | 38 | 94 | 168 | 169 | 192 | 193 | 243 | 244 | 252 | 253 | 360 | 394.0 | 423.0 | 361.0 | 393.0 | A | 1 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'A', '14 ': 'A', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'K', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'N', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'D', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'G', '91 ': 'I', '92 ': 'T', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'T', '97 ': 'G', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'G', '106 ': 'T', '107 ': 'W', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'L', '114 ': 'S', '115 ': 'A', '116 ': 'E', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGATGTCTAACTCT-1_contig_1 | AATTTGCTTATCTGGGGAGCTCTGGGAGAGGAGCCCCAGCCCTGAGATTCCCAGGTGTTTCCATTCAGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTGGGACTGAGCTGGATTTTCCTTTTGGCTATTTTAAAAGGTGTCCAGTGTGAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATCTATTGGTGGTGACTGCTATTCCTCCCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-9*01 | IGHD2-21*02 | IGHJ6*02 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATCTATTGGTGGTGACTGCTATTCCTCCCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATNNNNTGGTGGTGACTGCTATTCCNNNCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDLLVVTAIPPYYYGMDVWGQGTTVTVSS | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDXXVVTAIPXYYYGMDVWGQGTTVTVSS | 1 | 297 | 302.0 | 320.0 | 324 | 378 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGAT | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKD | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGAT | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKD | TGGTGGTGACTGCTATTCC | VVTAIP | TGGTGGTGACTGCTATTCC | VVTAIP | CTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | CTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGRSLRLSCAAS | GGATTCACCTTTGATGATTATGCC | GFTFDDYA | ATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGT | MHWVRQAPGKGLEWVSG | ATTAGTTGGAATAGTGGTAGCATA | ISWNSGSI | GGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGT | GYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCAAAAGATCTATTGGTGGTGACTGCTATTCCTCCCTACTACTACGGTATGGACGTC | AKDLLVVTAIPPYYYGMDV | TGTGCAAAAGATCTATTGGTGGTGACTGCTATTCCTCCCTACTACTACGGTATGGACGTCTGG | 63.0 | CAKDLLVVTAIPPYYYGMDVW | 21.0 | 464.595 | 37.218 | 106.435 | 154S297M153S1N | 455S9N19M130S | 477S7N55M72S | 9.771e-133 | 1.694e-06 | 5.368e-27 | 100.0 | 100.0 | 100.0 | 155 | 451 | 1 | 297 | 456.0 | 474.0 | 10.0 | 28.0 | 478 | 532 | 8 | 62 | 155 | 229 | 230 | 253 | 254 | 304 | 305 | 328 | 329 | 442 | 500.0 | 532.0 | 443.0 | 499.0 | CTAT | 4 | TCC | 3.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'D', '36 ': 'D', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'G'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'W', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'I'}, 'fwh3': {'66 ': 'G', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'L', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'D', '108 ': 'L', '109 ': 'L', '110 ': 'V', '111 ': 'V', '111A': 'T', '111B': 'A', '111C': 'I', '112C': 'P', '112B': 'P', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGATGTCTAACTCT-1_contig_2 | GCTGGGGTCTCAGGAGGCAGCGCTCTCAGGACATCTCCACCATGGCCTGGGCTCTGCTGCTCCTCACCCTCCTCACTCAGGGCACAGGGTCCTGGGCCCAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTCTTTCATGGGGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV2-14*01 | null | IGLJ3*02 | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTCTTTCATGGGGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTCTNNNNNNNNGGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTLSWGVFGGGTKLTVL | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTLXXXVFGGGTKLTVL | 1 | 296 | null | null | 305 | 340 | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTCT | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTL | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCACTCT | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTL | null | null | null | null | GGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACC | QSALTQPASVSGSPGQSITISCTGT | AGCAGTGACGTTGGTGGTTATAACTAT | SSDVGGYNY | GTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTAT | VSWYQQHPGKAPKLMIY | GAGGTCAGT | EVS | AATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGC | NRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | AGCTCATATACAAGCAGCAGCACTCTTTCATGGGGGGTG | SSYTSSSTLSWGV | TGCAGCTCATATACAAGCAGCAGCACTCTTTCATGGGGGGTGTTC | 45.0 | CSSYTSSSTLSWGVF | 15.0 | 463.037 | null | 69.904 | 98S296M255S1N | null | 402S2N36M211S | 3.1020000000000003e-132 | null | 5.735e-16 | 100.0 | null | 100.0 | 99 | 394 | 1 | 296 | null | null | null | null | 403 | 438 | 3 | 38 | 99 | 173 | 174 | 200 | 201 | 251 | 252 | 260 | 261 | 368 | 408.0 | 437.0 | 369.0 | 407.0 | TTCATGGG | 8 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'A', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'A', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'G', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'S', '19 ': 'I', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'T'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'D', '30 ': 'V', '31 ': 'G', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'M', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'V', '65 ': 'S'}, 'fwl3': {'66 ': 'N', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'S', '74 ': 'N', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'S', '106 ': 'S', '107 ': 'Y', '108 ': 'T', '109 ': 'S', '110 ': 'S', '111 ': 'S', '112 ': 'T', '113 ': 'L', '114 ': 'S', '115 ': 'W', '116 ': 'G', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGCTCAGCGTGTCC-1_contig_2 | TGGGGAGGGTCCTGCTCACATGGGAAATACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACACCTGTGGTTCTTCCTCCTGCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGAAAGGCGATTTTTGGAGTGGTTATTCTTGGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-30-4*01 | IGHD3-3*01 | IGHJ6*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGAAAGGCGATTTTTGGAGTGGTTATTCTTGGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGANNNNCGATTTTTGGAGTGGTTATTNNNNNACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARERRFLEWLFLDYGMDVWGQGTTVTVSS | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXRFLEWLXXXYGMDVWGQGTTVTVSS | 1 | 299 | 304.0 | 323.0 | 329 | 378 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CGATTTTTGGAGTGGTTATT | RFLEWL | CGATTTTTGGAGTGGTTATT | RFLEWL | ACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YGMDVWGQGTTVTVSS | ACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YGMDVWGQGTTVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSQTLSLTCTVS | GGTGGCTCCATCAGCAGTGGTGATTACTAC | GGSISSGDYY | TGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTAC | WSWIRQPPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCCAGAGAAAGGCGATTTTTGGAGTGGTTATTCTTGGACTACGGTATGGACGTC | ARERRFLEWLFLDYGMDV | TGTGCCAGAGAAAGGCGATTTTTGGAGTGGTTATTCTTGGACTACGGTATGGACGTCTGG | 60.0 | CARERRFLEWLFLDYGMDVW | 20.0 | 467.712 | 39.141 | 96.822 | 120S299M151S | 423S6N20M127S5N | 448S12N50M72S | 1.066e-133 | 4.212e-07 | 3.964e-24 | 100.0 | 100.0 | 100.0 | 121 | 419 | 1 | 299 | 424.0 | 443.0 | 7.0 | 26.0 | 449 | 498 | 13 | 62 | 121 | 195 | 196 | 225 | 226 | 276 | 277 | 297 | 298 | 411 | 466.0 | 498.0 | 412.0 | 465.0 | AAGG | 4 | CTTGG | 5.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'G', '36 ': 'D', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'E', '108 ': 'R', '109 ': 'R', '110 ': 'F', '111 ': 'L', '111A': 'E', '111B': 'W', '112C': 'L', '112B': 'F', '112A': 'L', '112 ': 'D', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGCTCAGCGTGTCC-1_contig_1 | GGAAAACAGAGCTTCAGCAAGCATAGTGGGAATCTGCACCATGCCCTGGGCTCTGCTCCTCCTGACCCTCCTCACTCACTCTGCAGTGTCAGTGGTCCAGGCAGGGCTGACTCAGCCACCCTCGGTGTCCAAGGGCTTGAGACAGACCGCCACACTCACCTGCACTGGGAACAGCAACAATGTTGGCAACCAAGGAGCAGCTTGGCTGCAGCAGCACCAGGGCCACCCTCCCAAACTCCTATCCTACAGGAATAACAACCGGCCCTCAGGGATCTCAGAGAGATTATCTGCATCCAGGTCAGGAAACACAGCCTCCCTGACCATTACTGGACTCCAGCCTGAGGACGAGGCTGACTATTACTGCTCAGCATGGGACAGCAGCCTCAGTGCTCGGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV10-54*01 | null | IGLJ2*01 | CAGGCAGGGCTGACTCAGCCACCCTCGGTGTCCAAGGGCTTGAGACAGACCGCCACACTCACCTGCACTGGGAACAGCAACAATGTTGGCAACCAAGGAGCAGCTTGGCTGCAGCAGCACCAGGGCCACCCTCCCAAACTCCTATCCTACAGGAATAACAACCGGCCCTCAGGGATCTCAGAGAGATTATCTGCATCCAGGTCAGGAAACACAGCCTCCCTGACCATTACTGGACTCCAGCCTGAGGACGAGGCTGACTATTACTGCTCAGCATGGGACAGCAGCCTCAGTGCTCGGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGGCAGGGCTGACTCAGCCACCCTCGGTGTCCAAGGGCTTGAGACAGACCGCCACACTCACCTGCACTGGGAACAGCAACAATGTTGGCAACCAAGGAGCAGCTTGGCTGCAGCAGCACCAGGGCCACCCTCCCAAACTCCTATCCTACAGGAATAACAACCGGCCCTCAGGGATCTCAGAGAGATTATCTGCATCCAGGTCAGGAAACACAGCCTCCCTGACCATTACTGGACTCCAGCCTGAGGACGAGGCTGACTATTACTGCTCAGCATGGGACAGCAGCCTCAGTGCTCNGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QAGLTQPPSVSKGLRQTATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNNRPSGISERLSASRSGNTASLTITGLQPEDEADYYCSAWDSSLSARVFGGGTKLTVL | QAGLTQPPSVSKGLRQTATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNNRPSGISERLSASRSGNTASLTITGLQPEDEADYYCSAWDSSLSAXVFGGGTKLTVL | 1 | 295 | null | null | 297 | 331 | CAGGCAGGGCTGACTCAGCCACCCTCGGTGTCCAAGGGCTTGAGACAGACCGCCACACTCACCTGCACTGGGAACAGCAACAATGTTGGCAACCAAGGAGCAGCTTGGCTGCAGCAGCACCAGGGCCACCCTCCCAAACTCCTATCCTACAGGAATAACAACCGGCCCTCAGGGATCTCAGAGAGATTATCTGCATCCAGGTCAGGAAACACAGCCTCCCTGACCATTACTGGACTCCAGCCTGAGGACGAGGCTGACTATTACTGCTCAGCATGGGACAGCAGCCTCAGTGCTC | QAGLTQPPSVSKGLRQTATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNNRPSGISERLSASRSGNTASLTITGLQPEDEADYYCSAWDSSLSA | CAGGCAGGGCTGACTCAGCCACCCTCGGTGTCCAAGGGCTTGAGACAGACCGCCACACTCACCTGCACTGGGAACAGCAACAATGTTGGCAACCAAGGAGCAGCTTGGCTGCAGCAGCACCAGGGCCACCCTCCCAAACTCCTATCCTACAGGAATAACAACCGGCCCTCAGGGATCTCAGAGAGATTATCTGCATCCAGGTCAGGAAACACAGCCTCCCTGACCATTACTGGACTCCAGCCTGAGGACGAGGCTGACTATTACTGCTCAGCATGGGACAGCAGCCTCAGTGCTC | QAGLTQPPSVSKGLRQTATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNNRPSGISERLSASRSGNTASLTITGLQPEDEADYYCSAWDSSLSA | null | null | null | null | GGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | CAGGCAGGGCTGACTCAGCCACCCTCGGTGTCCAAGGGCTTGAGACAGACCGCCACACTCACCTGCACTGGGAAC | QAGLTQPPSVSKGLRQTATLTCTGN | AGCAACAATGTTGGCAACCAAGGA | SNNVGNQG | GCAGCTTGGCTGCAGCAGCACCAGGGCCACCCTCCCAAACTCCTATCCTAC | AAWLQQHQGHPPKLLSY | AGGAATAAC | RNN | AACCGGCCCTCAGGGATCTCAGAGAGATTATCTGCATCCAGGTCAGGAAACACAGCCTCCCTGACCATTACTGGACTCCAGCCTGAGGACGAGGCTGACTATTACTGC | NRPSGISERLSASRSGNTASLTITGLQPEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | TCAGCATGGGACAGCAGCCTCAGTGCTCGGGTA | SAWDSSLSARV | TGCTCAGCATGGGACAGCAGCCTCAGTGCTCGGGTATTC | 39.0 | CSAWDSSLSARVF | 13.0 | 461.479 | null | 67.981 | 97S295M247S1N | null | 393S3N35M211S | 8.988000000000001e-132 | null | 2.14e-15 | 100.0 | null | 100.0 | 98 | 392 | 1 | 295 | null | null | null | null | 394 | 428 | 4 | 38 | 98 | 172 | 173 | 196 | 197 | 247 | 248 | 256 | 257 | 364 | 398.0 | 427.0 | 365.0 | 397.0 | G | 1 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'A', '3 ': 'G', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'K', '14 ': 'G', '15 ': 'L', '16 ': 'R', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'N'}, 'cdrl1': {'27 ': 'S', '28 ': 'N', '29 ': 'N', '30 ': 'V', '35 ': 'G', '36 ': 'N', '37 ': 'Q', '38 ': 'G'}, 'fwl2': {'39 ': 'A', '40 ': 'A', '41 ': 'W', '42 ': 'L', '43 ': 'Q', '44 ': 'Q', '45 ': 'H', '46 ': 'Q', '47 ': 'G', '48 ': 'H', '49 ': 'P', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'S', '55 ': 'Y'}, 'cdrl2': {'56 ': 'R', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'N', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'S', '74 ': 'E', '75 ': 'R', '76 ': 'L', '77 ': 'S', '78 ': 'A', '79 ': 'S', '80 ': 'R', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'T', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'S', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'L', '114 ': 'S', '115 ': 'A', '116 ': 'R', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGCTCAGCTGGAAC-1_contig_2 | CGAGCCCAGCACTGGAAGTCGCCGGTGTTTCCATTCGGTGATCATCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGGAGGGGATTACGTGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30-3*01 | IGHD3-16*01 | IGHJ4*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGGAGGGGATTACGTGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGNNNNNGATTACGTNTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGGDYVYFDYWGQGTLVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXXDYVYFDYWGQGTLVTVSS | 1 | 295 | 301.0 | 308.0 | 310 | 355 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | GATTACGT | DYV | GATTACGT | DYV | TACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | TACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGCT | GFTFSSYA | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGCAATAAA | ISYDGSNK | TACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGGAGGGGATTACGTGTACTTTGACTAC | ARGGDYVYFDY | TGTGCGAGAGGAGGGGATTACGTGTACTTTGACTACTGG | 39.0 | CARGGDYVYFDYW | 13.0 | 461.479 | 16.069 | 89.131 | 124S295M131S1N | 424S7N8M118S22N | 433S2N46M71S | 7.721e-132 | 3.582 | 7.895999999999999e-22 | 100.0 | 100.0 | 100.0 | 125 | 419 | 1 | 295 | 425.0 | 432.0 | 8.0 | 15.0 | 434 | 479 | 3 | 48 | 125 | 199 | 200 | 223 | 224 | 274 | 275 | 298 | 299 | 412 | 446.0 | 478.0 | 413.0 | 445.0 | GAGGG | 5 | G | 1.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'G', '109 ': 'D', '110 ': 'Y', '113 ': 'V', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGCTCAGCTGGAAC-1_contig_1 | AGTCCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAGATGTGACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTGTCACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTG | K | F | T | F | T | F | T | IGKV1-9*01 | null | IGKJ2*01 | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTGTCACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTNNCACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPVTFGQGTKLEIK | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPXTFGQGTKLEIK | 1 | 285 | null | null | 288 | 322 | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCT | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYP | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCT | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYP | null | null | null | null | CACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | TFGQGTKLEIK | CACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | TFGQGTKLEIK | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQLTQSPSFLSASVGDRVTITCRAS | CAGGGCATTAGCAGTTAT | QGISSY | TTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | GCTGCATCC | AAS | ACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGT | TLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAACAGCTTAATAGTTACCCTGTCACT | QQLNSYPVT | TGTCAACAGCTTAATAGTTACCCTGTCACTTTT | 33.0 | CQQLNSYPVTF | 11.0 | 445.898 | null | 67.981 | 86S285M90S2N | null | 373S4N35M53S | 3.14e-127 | null | 1.534e-15 | 100.0 | null | 100.0 | 87 | 371 | 1 | 285 | null | null | null | null | 374 | 408 | 5 | 39 | 87 | 164 | 165 | 182 | 183 | 233 | 234 | 242 | 243 | 350 | 378.0 | 407.0 | 351.0 | 377.0 | GT | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTG | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'F', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'L', '108 ': 'N', '109 ': 'S', '114 ': 'Y', '115 ': 'P', '116 ': 'V', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGCTCAGGAACTGC-1_contig_1 | AGCTCTGGGAGAGGAGCCCCAGCCTTGGGATTCCCAAGTGTTTTCATTCAGTGATCAGGACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGATTTTCCTTGCTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACCACCCTAGCAGCAGCTGGTACTGTGTCACTATCAGATTGGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-15*01 | IGHD6-13*01 | IGHJ6*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACCACCCTAGCAGCAGCTGGTACTGTGTCACTATCAGATTGGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACNNNNNTAGCAGCAGCTGGTACNNNNNNNNNNNNNNNNNNNTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTTLAAAGTVSLSDWYGMDVWGQGTTVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTXXAAAGTXXXXXXYGMDVWGQGTTVTVSS | 1 | 299 | 305.0 | 320.0 | 340 | 387 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCAC | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCAC | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | TAGCAGCAGCTGGTAC | AAAGT | TAGCAGCAGCTGGTAC | AAAGT | TACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YGMDVWGQGTTVTVSS | TACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YGMDVWGQGTTVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACTTTCAGTAACGCCTGG | GFTFSNAW | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGT | MSWVRQAPGKGLEWVGR | ATTAAAAGCAAAACTGATGGTGGGACAACA | IKSKTDGGTT | GACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGT | DYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | ACCACCACCCTAGCAGCAGCTGGTACTGTGTCACTATCAGATTGGTACGGTATGGACGTC | TTTLAAAGTVSLSDWYGMDV | TGTACCACCACCCTAGCAGCAGCTGGTACTGTGTCACTATCAGATTGGTACGGTATGGACGTCTGG | 66.0 | CTTTLAAAGTVSLSDWYGMDVW | 22.0 | 467.712 | 31.45 | 92.976 | 137S299M160S3N | 441S5N16M139S | 476S14N48M72S | 1.1109999999999995e-133 | 9.107e-05 | 5.962e-23 | 100.0 | 100.0 | 100.0 | 138 | 436 | 1 | 299 | 442.0 | 457.0 | 6.0 | 21.0 | 477 | 524 | 15 | 62 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 317 | 318 | 431 | 492.0 | 524.0 | 432.0 | 491.0 | CACCC | 5 | TGTGTCACTATCAGATTGG | 19.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'N', '37 ': 'A', '38 ': 'W'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'K', '58 ': 'S', '59 ': 'K', '60 ': 'T', '61 ': 'D', '62 ': 'G', '63 ': 'G', '64 ': 'T', '65 ': 'T'}, 'fwh3': {'66 ': 'D', '67 ': 'Y', '68 ': 'A', '69 ': 'A', '70 ': 'P', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'D', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'T', '106 ': 'T', '107 ': 'T', '108 ': 'L', '109 ': 'A', '110 ': 'A', '111 ': 'A', '111A': 'G', '111B': 'T', '111C': 'V', '112D': 'S', '112C': 'L', '112B': 'S', '112A': 'D', '112 ': 'W', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGCTCAGGAACTGC-1_contig_2 | CTGGGCCTCAGGAAGCAGCATCGGAGGTGCCTCAGCCATGGCATGGATCCCTCTCTTCCTCGGCGTCCTTGCTTACTGCACAGGATCCGTGGCCTCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTTTTTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAGGTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-1*01 | null | IGLJ1*01 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTTTTTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACTNNTTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTFYVFGTGTKVTVL | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTXYVFGTGTKVTVL | 1 | 282 | null | null | 285 | 322 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACT | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSST | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCACT | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSST | null | null | null | null | TTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | YVFGTGTKVTVL | TTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | YVFGTGTKVTVL | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTASITCSGD | AAATTGGGGGATAAATAT | KLGDKY | GCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTAT | ACWYQQKPGQSPVLVIY | CAAGATAGC | QDS | AAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGT | KRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYC | TTCGGAACTGGGACCAAGGTCACCGTCCTA | FGTGTKVTVL | CAGGCGTGGGACAGCAGCACTTTTTATGTC | QAWDSSTFYV | TGTCAGGCGTGGGACAGCAGCACTTTTTATGTCTTC | 36.0 | CQAWDSSTFYVF | 12.0 | 441.224 | null | 73.749 | 94S282M251S3N | null | 378S38M211S | 1.1029999999999999e-125 | null | 3.852e-17 | 100.0 | null | 100.0 | 95 | 376 | 1 | 282 | null | null | null | null | 379 | 416 | 1 | 38 | 95 | 169 | 170 | 187 | 188 | 238 | 239 | 247 | 248 | 355 | 386.0 | 415.0 | 356.0 | 385.0 | TT | 2 | null | null | GTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'K', '28 ': 'L', '29 ': 'G', '36 ': 'D', '37 ': 'K', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'C', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'Q', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'T', '95 ': 'Q', '96 ': 'A', '97 ': 'M', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'S', '113 ': 'S', '114 ': 'T', '115 ': 'F', '116 ': 'Y', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'T', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGCTCAGGACTGGT-1_contig_2 | GGGGAGGGTCCTGCTCACATGGGAAATACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACACCTGTGGTTCTTCCTCCTGCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGTGGCCTCTGGGGTGACTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-31*03 | IGHD2-21*02 | IGHJ4*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGTGGCCTCTGGGGTGACTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGNNNNNNNNNNGGTGACTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCASGLWGDYYFDYWGQGTLVTVSS | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAXXXXGDYYFDYWGQGTLVTVSS | 1 | 296 | 307.0 | 313.0 | 314 | 361 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | GGTGACT | GD | GGTGACT | GD | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSQTLSLTCTVS | GGTGGCTCCATCAGCAGTGGTGGTTACTAC | GGSISSGGYY | TGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTAC | WSWIRQHPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGTGGCCTCTGGGGTGACTACTACTTTGACTAC | ASGLWGDYYFDY | TGTGCGAGTGGCCTCTGGGGTGACTACTACTTTGACTACTGG | 42.0 | CASGLWGDYYFDYW | 14.0 | 463.037 | 14.146 | 92.976 | 119S296M136S3N | 425S13N7M119S8N | 432S48M71S | 2.6270000000000002e-132 | 13.61 | 5.504e-23 | 100.0 | 100.0 | 100.0 | 120 | 415 | 1 | 296 | 426.0 | 432.0 | 14.0 | 20.0 | 433 | 480 | 1 | 48 | 120 | 194 | 195 | 224 | 225 | 275 | 276 | 296 | 297 | 410 | 447.0 | 479.0 | 411.0 | 446.0 | TGGCCTCTGG | 10 | null | 0.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'G', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'S', '107 ': 'G', '108 ': 'L', '109 ': 'W', '110 ': 'G', '112 ': 'D', '113 ': 'Y', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGCTCAGGACTGGT-1_contig_1 | AGAGCTCTGGAGAAGAGCTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-20*01 | null | IGKJ1*01 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPWTFGQGTKVEIK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPWTFGQGTKVEIK | 1 | 287 | null | null | 288 | 325 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | null | null | null | null | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPGTLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCAGCTAC | QSVSSSY | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAGTATGGTAGCTCACCGTGGACG | QQYGSSPWT | TGTCAGCAGTATGGTAGCTCACCGTGGACGTTC | 33.0 | CQQYGSSPWTF | 11.0 | 449.014 | null | 73.749 | 104S287M174S3N | null | 391S38M136S | 4.49e-128 | null | 3.465e-17 | 100.0 | null | 100.0 | 105 | 391 | 1 | 287 | null | null | null | null | 392 | 429 | 1 | 38 | 105 | 182 | 183 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 399.0 | 428.0 | 372.0 | 398.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'G', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'G', '109 ': 'S', '114 ': 'S', '115 ': 'P', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGCTCCACATAACC-1_contig_2 | AGGTCTCAGAGAGGAGCCTTAGCCCTGGACTCCAAGGCCTTTCCACTTGGTGATCAGCACTGAGCACAGAGGACTCACCATGGAATTGGGGCTGAGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTCGCGATATTTTGACTGGCCGATAGGTGGAAAGGAGCTCAGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-7*01 | IGHD3-9*01 | IGHJ5*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTCGCGATATTTTGACTGGCCGATAGGTGGAAAGGAGCTCAGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGANNNNCGATATTTTGACTGGNNNNNNNNNNNNNNNNNNNNNNNCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDSRYFDWPIGGKELSWFDPWGQGTLVTVSS | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARXXRYFDWXXXXXXXXWFDPWGQGTLVTVSS | 1 | 296 | 301.0 | 315.0 | 339 | 385 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | CGATATTTTGACTGG | RYFDW | CGATATTTTGACTGG | RYFDW | CTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | CTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGTAGCTATTGG | GFTFSSYW | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAAC | MSWVRQAPGKGLEWVAN | ATAAAGCAAGATGGAAGTGAGAAA | IKQDGSEK | TACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGATTCGCGATATTTTGACTGGCCGATAGGTGGAAAGGAGCTCAGCTGGTTCGACCCC | ARDSRYFDWPIGGKELSWFDP | TGTGCGAGAGATTCGCGATATTTTGACTGGCCGATAGGTGGAAAGGAGCTCAGCTGGTTCGACCCCTGG | 69.0 | CARDSRYFDWPIGGKELSWFDPW | 23.0 | 463.037 | 29.528 | 91.054 | 136S296M160S | 436S6N15M141S10N | 474S4N47M71S | 2.817e-132 | 0.0003429 | 2.2449999999999996e-22 | 100.0 | 100.0 | 100.0 | 137 | 432 | 1 | 296 | 437.0 | 451.0 | 7.0 | 21.0 | 475 | 521 | 5 | 51 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 488.0 | 520.0 | 425.0 | 487.0 | TTCG | 4 | CCGATAGGTGGAAAGGAGCTCAG | 23.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'W'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'N'}, 'cdrh2': {'56 ': 'I', '57 ': 'K', '58 ': 'Q', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'E', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'V', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'S', '109 ': 'R', '110 ': 'Y', '111 ': 'F', '111A': 'D', '111B': 'W', '111C': 'P', '111D': 'I', '112D': 'G', '112C': 'G', '112B': 'K', '112A': 'E', '112 ': 'L', '113 ': 'S', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGCTCCACATAACC-1_contig_1 | AGCCTGGGCCTCAGGAAGCAGCATCGGGGGTGCCGCAGCCATGGCCTGGACCGCTCTCCTTCTGAGCCTCCTTGCTCACTTTACAGGTTCTGTGGCCTCCTATGAGCTGACTCAGCCACTCTCAGTGTCAGTGGCCCTGGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAATGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCATCTATAGGGATAGCAACCGGCCCTCTGGGATCCCTGAGCGATTCTCTGGCTCCAACTCGGGGAACACGGCCACCCTGACCATCAGCAGAGCCCAAGCCGGGGATGAGGCTGACTATTACTGTCAGGTGTGGGACAGCAGCACCCATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-9*01 | null | IGLJ2*01 | TCCTATGAGCTGACTCAGCCACTCTCAGTGTCAGTGGCCCTGGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAATGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCATCTATAGGGATAGCAACCGGCCCTCTGGGATCCCTGAGCGATTCTCTGGCTCCAACTCGGGGAACACGGCCACCCTGACCATCAGCAGAGCCCAAGCCGGGGATGAGGCTGACTATTACTGTCAGGTGTGGGACAGCAGCACCCATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACTCAGCCACTCTCAGTGTCAGTGGCCCTGGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAATGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCATCTATAGGGATAGCAACCGGCCCTCTGGGATCCCTGAGCGATTCTCTGGCTCCAACTCGGGGAACACGGCCACCCTGACCATCAGCAGAGCCCAAGCCGGGGATGAGGCTGACTATTACTGTCAGGTGTGGGACAGCAGCACNNNTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPLSVSVALGQTARITCGGNNIGSKNVHWYQQKPGQAPVLVIYRDSNRPSGIPERFSGSNSGNTATLTISRAQAGDEADYYCQVWDSSTHVVFGGGTKLTVL | SYELTQPLSVSVALGQTARITCGGNNIGSKNVHWYQQKPGQAPVLVIYRDSNRPSGIPERFSGSNSGNTATLTISRAQAGDEADYYCQVWDSSTXVVFGGGTKLTVL | 1 | 281 | null | null | 285 | 322 | TCCTATGAGCTGACTCAGCCACTCTCAGTGTCAGTGGCCCTGGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAATGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCATCTATAGGGATAGCAACCGGCCCTCTGGGATCCCTGAGCGATTCTCTGGCTCCAACTCGGGGAACACGGCCACCCTGACCATCAGCAGAGCCCAAGCCGGGGATGAGGCTGACTATTACTGTCAGGTGTGGGACAGCAGCAC | SYELTQPLSVSVALGQTARITCGGNNIGSKNVHWYQQKPGQAPVLVIYRDSNRPSGIPERFSGSNSGNTATLTISRAQAGDEADYYCQVWDSST | TCCTATGAGCTGACTCAGCCACTCTCAGTGTCAGTGGCCCTGGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAATGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCATCTATAGGGATAGCAACCGGCCCTCTGGGATCCCTGAGCGATTCTCTGGCTCCAACTCGGGGAACACGGCCACCCTGACCATCAGCAGAGCCCAAGCCGGGGATGAGGCTGACTATTACTGTCAGGTGTGGGACAGCAGCAC | SYELTQPLSVSVALGQTARITCGGNNIGSKNVHWYQQKPGQAPVLVIYRDSNRPSGIPERFSGSNSGNTATLTISRAQAGDEADYYCQVWDSST | null | null | null | null | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TCCTATGAGCTGACTCAGCCACTCTCAGTGTCAGTGGCCCTGGGACAGACGGCCAGGATTACCTGTGGGGGAAAC | SYELTQPLSVSVALGQTARITCGGN | AACATTGGAAGTAAAAAT | NIGSKN | GTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCATCTAT | VHWYQQKPGQAPVLVIY | AGGGATAGC | RDS | AACCGGCCCTCTGGGATCCCTGAGCGATTCTCTGGCTCCAACTCGGGGAACACGGCCACCCTGACCATCAGCAGAGCCCAAGCCGGGGATGAGGCTGACTATTACTGT | NRPSGIPERFSGSNSGNTATLTISRAQAGDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGGTGTGGGACAGCAGCACCCATGTGGTA | QVWDSSTHVV | TGTCAGGTGTGGGACAGCAGCACCCATGTGGTATTC | 36.0 | CQVWDSSTHVVF | 12.0 | 439.666 | null | 73.749 | 97S281M252S4N | null | 381S38M211S | 3.2639999999999996e-125 | null | 3.871e-17 | 100.0 | null | 100.0 | 98 | 378 | 1 | 281 | null | null | null | null | 382 | 419 | 1 | 38 | 98 | 172 | 173 | 190 | 191 | 241 | 242 | 250 | 251 | 358 | 389.0 | 418.0 | 359.0 | 388.0 | CCA | 3 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'L', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'A', '15 ': 'L', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'G', '25 ': 'G', '26 ': 'N'}, 'cdrl1': {'27 ': 'N', '28 ': 'I', '29 ': 'G', '36 ': 'S', '37 ': 'K', '38 ': 'N'}, 'fwl2': {'39 ': 'V', '40 ': 'H', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'R', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'N', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'A', '95 ': 'Q', '96 ': 'A', '97 ': 'G', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'V', '107 ': 'W', '108 ': 'D', '109 ': 'S', '113 ': 'S', '114 ': 'T', '115 ': 'H', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGCTCCACGGTAAG-1_contig_1 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGGAGGTAACTACTATGATAGTAGTGGTTTCCAGGGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD3-22*01 | IGHJ4*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGGAGGTAACTACTATGATAGTAGTGGTTTCCAGGGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGNNNNNNNNTACTATGATAGTAGTGGTTNNNNNNNNTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKGGNYYDSSGFQGYFDYWGQGTLVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXXYYDSSGXXXYFDYWGQGTLVTVSS | 1 | 295 | 304.0 | 322.0 | 331 | 376 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | TACTATGATAGTAGTGGTT | YYDSSG | TACTATGATAGTAGTGGTT | YYDSSG | TACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | TACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAAAGGAGGTAACTACTATGATAGTAGTGGTTTCCAGGGGTACTTTGACTAC | AKGGNYYDSSGFQGYFDY | TGTGCGAAAGGAGGTAACTACTATGATAGTAGTGGTTTCCAGGGGTACTTTGACTACTGG | 60.0 | CAKGGNYYDSSGFQGYFDYW | 20.0 | 461.479 | 37.218 | 89.131 | 136S295M152S1N | 439S4N19M125S8N | 466S2N46M71S | 8.163e-132 | 1.634e-06 | 8.379999999999999e-22 | 100.0 | 100.0 | 100.0 | 137 | 431 | 1 | 295 | 440.0 | 458.0 | 5.0 | 23.0 | 467 | 512 | 3 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 479.0 | 511.0 | 425.0 | 478.0 | GAGGTAAC | 8 | TCCAGGGG | 8.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'G', '108 ': 'G', '109 ': 'N', '110 ': 'Y', '111 ': 'Y', '111A': 'D', '111B': 'S', '112C': 'S', '112B': 'G', '112A': 'F', '112 ': 'Q', '113 ': 'G', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGCTCCACGGTAAG-1_contig_2 | GGGCCTTGGGGCTGAGCCCTTCTCTGGAAACCACACAGCTCCTCCTGCAGCAGCCCCTGACTGCTGATTTGCATCACGGGCCACTCTTTCCAGCAAGGGGATAAGAGAGGCCTGGAAGAACCTGCCCAGCCTGGGCCTCAGGAAGCAGCATCGGAGGTGCCTCAGCCATGGCATGGATCCCTCTCTTCCTCGGCGTCCTTGCTTACTGCACAGGTTCCGTGGCCTCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCCCCATATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-1*01 | null | IGLJ2*01 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCCCCATATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGCNNNNTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSPIFGGGTKLTVL | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSXXFGGGTKLTVL | 1 | 279 | null | null | 284 | 316 | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGC | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSS | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCAAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACAGCAGC | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSS | null | null | null | null | TATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | FGGGTKLTVL | TATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | FGGGTKLTVL | TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCAGCATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTASITCSGD | AAATTGGGGGATAAATAT | KLGDKY | GCTTGCTGGTATCAGCAGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTAT | ACWYQQKPGQSPVLVIY | CAAGATAGC | QDS | AAGCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGT | KRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGGCGTGGGACAGCAGCCCCATA | QAWDSSPI | TGTCAGGCGTGGGACAGCAGCCCCATATTC | 30.0 | CQAWDSSPIF | 10.0 | 436.549 | null | 64.136 | 224S279M248S6N | null | 507S5N33M211S | 3.4e-124 | null | 3.625e-14 | 100.0 | null | 100.0 | 225 | 503 | 1 | 279 | null | null | null | null | 508 | 540 | 6 | 38 | 225 | 299 | 300 | 317 | 318 | 368 | 369 | 377 | 378 | 485 | 510.0 | 539.0 | 486.0 | 509.0 | CCCA | 4 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'K', '28 ': 'L', '29 ': 'G', '36 ': 'D', '37 ': 'K', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'C', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'Q', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'T', '95 ': 'Q', '96 ': 'A', '97 ': 'M', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'A', '107 ': 'W', '108 ': 'D', '114 ': 'S', '115 ': 'S', '116 ': 'P', '117 ': 'I'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGCTCCACTTGGAT-1_contig_1 | GAGCTCTGGGAGAGGAGCCCAGCACTAGAAGTCGGCGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGCTAGTGGATACAGCTACTTATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-33*01 | IGHD5-18*01 | IGHJ6*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGCTAGTGGATACAGCTACTTATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGANNNNGTGGATACAGCTANNNATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARELVDTATYYYYYYGMDVWGQGTTVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXXVDTAXXYYYYYGMDVWGQGTTVTVSS | 1 | 296 | 301.0 | 313.0 | 317 | 378 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | GTGGATACAGCTA | VDTA | GTGGATACAGCTA | VDTA | ATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | ATTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGGC | GFTFSSYG | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATGGTATGATGGAAGTAATAAA | IWYDGSNK | TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGAGCTAGTGGATACAGCTACTTATTACTACTACTACTACGGTATGGACGTC | ARELVDTATYYYYYYGMDV | TGTGCGAGAGAGCTAGTGGATACAGCTACTTATTACTACTACTACTACGGTATGGACGTCTGG | 63.0 | CARELVDTATYYYYYYGMDVW | 21.0 | 463.037 | 25.682 | 119.894 | 137S296M154S | 437S13M137S7N | 453S62M72S | 2.7920000000000002e-132 | 0.004887 | 4.631e-31 | 100.0 | 100.0 | 100.0 | 138 | 433 | 1 | 296 | 438.0 | 450.0 | 1.0 | 13.0 | 454 | 515 | 1 | 62 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 483.0 | 515.0 | 426.0 | 482.0 | GCTA | 4 | CTT | 3.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'W', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'E', '108 ': 'L', '109 ': 'V', '110 ': 'D', '111 ': 'T', '111A': 'A', '111B': 'T', '111C': 'Y', '112C': 'Y', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGCTCCACTTGGAT-1_contig_2 | AGTCCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAGATGTGACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTCGGGTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-9*01 | null | IGKJ3*01 | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTCGGGTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTCNNNTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPRVTFGPGTKVDIK | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPXXTFGPGTKVDIK | 1 | 286 | null | null | 290 | 325 | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTC | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYP | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAACAGCTTAATAGTTACCCTC | DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYP | null | null | null | null | TCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | TFGPGTKVDIK | TCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | TFGPGTKVDIK | GACATCCAGTTGACCCAGTCTCCATCCTTCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQLTQSPSFLSASVGDRVTITCRAS | CAGGGCATTAGCAGTTAT | QGISSY | TTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | GCTGCATCC | AAS | ACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGT | TLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYC | TTCGGCCCTGGGACCAAAGTGGATATCAAA | FGPGTKVDIK | CAACAGCTTAATAGTTACCCTCGGGTCACT | QQLNSYPRVT | TGTCAACAGCTTAATAGTTACCCTCGGGTCACTTTC | 36.0 | CQQLNSYPRVTF | 12.0 | 447.456 | null | 69.904 | 86S286M175S1N | null | 375S2N36M136S | 1.278e-127 | null | 4.818e-16 | 100.0 | null | 100.0 | 87 | 372 | 1 | 286 | null | null | null | null | 376 | 411 | 3 | 38 | 87 | 164 | 165 | 182 | 183 | 233 | 234 | 242 | 243 | 350 | 381.0 | 410.0 | 351.0 | 380.0 | GGG | 3 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'F', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'L', '108 ': 'N', '109 ': 'S', '113 ': 'Y', '114 ': 'P', '115 ': 'R', '116 ': 'V', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'P', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'D', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGCTCCATCACAAC-1_contig_2 | GAGCTCTGGGAGAGGAGCCCAGCACTAGAAGTCGGCGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAATCGGGAATTGGACTGGAACTACCCTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30*18 | IGHD1-7*01 | IGHJ2*01 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAATCGGGAATTGGACTGGAACTACCCTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAANNNNNNNNNNNACTGGAACTACNCTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKSGIGLELPWYFDLWGRGTLVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXXXLELXWYFDLWGRGTLVTVSS | 1 | 294 | 306.0 | 316.0 | 318 | 367 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | ACTGGAACTAC | LEL | ACTGGAACTAC | LEL | CTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG | WYFDLWGRGTLVTVSS | CTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG | WYFDLWGRGTLVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGGC | GFTFSSYG | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGTAATAAA | ISYDGSNK | TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCGTGGCACCCTGGTCACTGTCTCCTCA | WGRGTLVTVSS | GCGAAATCGGGAATTGGACTGGAACTACCCTGGTACTTCGATCTC | AKSGIGLELPWYFDL | TGTGCGAAATCGGGAATTGGACTGGAACTACCCTGGTACTTCGATCTCTGG | 51.0 | CAKSGIGLELPWYFDLW | 17.0 | 459.921 | 21.837 | 96.822 | 137S294M144S2N | 442S6N11M122S | 454S3N50M71S | 2.369e-131 | 0.06878 | 3.999e-24 | 100.0 | 100.0 | 100.0 | 138 | 431 | 1 | 294 | 443.0 | 453.0 | 7.0 | 17.0 | 455 | 504 | 4 | 53 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 471.0 | 503.0 | 426.0 | 470.0 | TCGGGAATTGG | 11 | C | 1.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'S', '108 ': 'G', '109 ': 'I', '110 ': 'G', '111 ': 'L', '111A': 'E', '112A': 'L', '112 ': 'P', '113 ': 'W', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'L'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'R', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGCTCCATCACAAC-1_contig_1 | AGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAAATGTGACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-5*03 | null | IGKJ1*01 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSWTFGQGTKVEIK | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSWTFGQGTKVEIK | 1 | 284 | null | null | 285 | 322 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYS | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATTC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYS | null | null | null | null | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQMTQSPSTLSASVGDRVTITCRAS | CAGAGTATTAGTAGCTGG | QSISSW | TTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | AAGGCGTCT | KAS | AGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGC | SLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAACAGTATAATAGTTATTCGTGGACG | QQYNSYSWT | TGCCAACAGTATAATAGTTATTCGTGGACGTTC | 33.0 | CQQYNSYSWTF | 11.0 | 444.34 | null | 73.749 | 93S284M174S3N | null | 377S38M136S | 1.117e-126 | null | 3.377e-17 | 100.0 | null | 100.0 | 94 | 377 | 1 | 284 | null | null | null | null | 378 | 415 | 1 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 385.0 | 414.0 | 358.0 | 384.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'W'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'K', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'D', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'S', '114 ': 'Y', '115 ': 'S', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGCTCGTACAGCAG-1_contig_1 | ACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACATCTGTGGTTCTTCCTCCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGGGGGTATTGTAGTAGTACCAGCTGCTATATATGTATACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-61*02 | IGHD2-2*02 | IGHJ6*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGGGGGTATTGTAGTAGTACCAGCTGCTATATATGTATACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGNNNNTATTGTAGTAGTACCAGCTGCTATANNNNNNTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGGIVVVPAAIYVYYYYYGMDVWGQGTTVTVSS | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXIVVVPAAIXXYYYYYGMDVWGQGTTVTVSS | 1 | 298 | 303.0 | 327.0 | 334 | 393 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | TATTGTAGTAGTACCAGCTGCTATA | IVVVPAAI | TATTGTAGTAGTACCAGCTGCTATA | IVVVPAAI | TACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | TACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSQTLSLTCTVS | GGTGGCTCCATCAGCAGTGGTAGTTACTAC | GGSISSGSYY | TGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGT | WSWIRQPAGKGLEWIGR | ATCTATACCAGTGGGAGCACC | IYTSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGGGGGTATTGTAGTAGTACCAGCTGCTATATATGTATACTACTACTACTACGGTATGGACGTC | ARGGIVVVPAAIYVYYYYYGMDV | TGTGCGAGAGGGGGTATTGTAGTAGTACCAGCTGCTATATATGTATACTACTACTACTACGGTATGGACGTCTGG | 75.0 | CARGGIVVVPAAIYVYYYYYGMDVW | 25.0 | 466.153 | 48.755 | 116.049 | 92S298M167S1N | 394S4N25M138S2N | 425S2N60M72S | 3.0639999999999998e-133 | 5.253e-10 | 6.31e-30 | 100.0 | 100.0 | 100.0 | 93 | 390 | 1 | 298 | 395.0 | 419.0 | 5.0 | 29.0 | 426 | 485 | 3 | 62 | 93 | 167 | 168 | 197 | 198 | 248 | 249 | 269 | 270 | 383 | 453.0 | 485.0 | 384.0 | 452.0 | GGGG | 4 | TATGTA | 6.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'G', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'A', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'T', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'G', '109 ': 'I', '110 ': 'V', '111 ': 'V', '111A': 'V', '111B': 'P', '111C': 'A', '111D': 'A', '111E': 'I', '112E': 'Y', '112D': 'V', '112C': 'Y', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGCTCGTACAGCAG-1_contig_2 | GATCAGGACTTCTCAGTTCATCTTCTCACCATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGATACCTGGATCCAGTGCAGATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCCCACCTTCGGCCAAGGGACACGACTGGAGATTAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV2D-29*01 | null | IGKJ5*01 | GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCCCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCCCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | DIVMTQTPLSLSVTPGQPASISCKSSQSLLHSDGKTYLYWYLQKPGQPPQLLIYEVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQSIQLPTFGQGTRLEIK | DIVMTQTPLSLSVTPGQPASISCKSSQSLLHSDGKTYLYWYLQKPGQPPQLLIYEVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQSIQLPTFGQGTRLEIK | 1 | 299 | null | null | 300 | 334 | GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCC | DIVMTQTPLSLSVTPGQPASISCKSSQSLLHSDGKTYLYWYLQKPGQPPQLLIYEVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQSIQLP | GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGTCAGAGCCTCCTGCATAGTGATGGAAAGACCTATTTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTATGAAGTTTCCAACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAAGTATACAGCTTCC | DIVMTQTPLSLSVTPGQPASISCKSSQSLLHSDGKTYLYWYLQKPGQPPQLLIYEVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQSIQLP | null | null | null | null | CACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | TFGQGTRLEIK | CACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | TFGQGTRLEIK | GATATTGTGATGACCCAGACTCCACTCTCTCTGTCCGTCACCCCTGGACAGCCGGCCTCCATCTCCTGCAAGTCTAGT | DIVMTQTPLSLSVTPGQPASISCKSS | CAGAGCCTCCTGCATAGTGATGGAAAGACCTAT | QSLLHSDGKTY | TTGTATTGGTACCTGCAGAAGCCAGGCCAGCCTCCACAGCTCCTGATCTAT | LYWYLQKPGQPPQLLIY | GAAGTTTCC | EVS | AACCGGTTCTCTGGAGTGCCAGATAGGTTCAGTGGCAGCGGGTCAGGGACAGATTTCACACTGAAAATCAGCCGGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGC | NRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYC | TTCGGCCAAGGGACACGACTGGAGATTAAA | FGQGTRLEIK | ATGCAAAGTATACAGCTTCCCACC | MQSIQLPT | TGCATGCAAAGTATACAGCTTCCCACCTTC | 30.0 | CMQSIQLPTF | 10.0 | 467.712 | null | 67.981 | 90S299M171S3N | null | 389S3N35M136S | 1.0469999999999999e-133 | null | 1.871e-15 | 100.0 | null | 100.0 | 91 | 389 | 1 | 299 | null | null | null | null | 390 | 424 | 4 | 38 | 91 | 168 | 169 | 201 | 202 | 252 | 253 | 261 | 262 | 369 | 394.0 | 423.0 | 370.0 | 393.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'T', '8 ': 'P', '9 ': 'L', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'V', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'P', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'L', '30 ': 'L', '31 ': 'H', '32 ': 'S', '34 ': 'D', '35 ': 'G', '36 ': 'K', '37 ': 'T', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'Y', '41 ': 'W', '42 ': 'Y', '43 ': 'L', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'P', '50 ': 'P', '51 ': 'Q', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'E', '57 ': 'V', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'F', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'K', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'G', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'M', '106 ': 'Q', '107 ': 'S', '108 ': 'I', '114 ': 'Q', '115 ': 'L', '116 ': 'P', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'R', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGCTCGTAGCGCTC-1_contig_2 | AGGTCTCAGAGAGGAGCCTTAGCCCTGGACTCCAAGGCCTTTCCACTTGGTGATCAGCACTGAGCACAGAGGACTCACCATGGAATTGGGGCTGAGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGATCATTGAGTATAACCCACGACGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-7*01 | IGHD1-20*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGATCATTGAGTATAACCCACGACGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGANNNNNNNGTATAACNNNNNNNGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARSLSITHDDYWGQGTLVTVSS | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARXXXITXXDYWGQGTLVTVSS | 1 | 294 | 302.0 | 308.0 | 316 | 355 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GTATAAC | IT | GTATAAC | IT | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGTAGCTATTGG | GFTFSSYW | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAAC | MSWVRQAPGKGLEWVAN | ATAAAGCAAGATGGAAGTGAGAAA | IKQDGSEK | TACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGATCATTGAGTATAACCCACGACGACTAC | ARSLSITHDDY | TGTGCGAGATCATTGAGTATAACCCACGACGACTACTGG | 39.0 | CARSLSITHDDYW | 13.0 | 459.921 | 14.146 | 77.595 | 136S294M132S2N | 437S1N7M118S9N | 451S8N40M71S | 2.326e-131 | 13.88 | 2.397e-18 | 100.0 | 100.0 | 100.0 | 137 | 430 | 1 | 294 | 438.0 | 444.0 | 2.0 | 8.0 | 452 | 491 | 9 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 458.0 | 490.0 | 425.0 | 457.0 | TCATTGA | 7 | CCACGAC | 7.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'W'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'N'}, 'cdrh2': {'56 ': 'I', '57 ': 'K', '58 ': 'Q', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'E', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'V', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'S', '108 ': 'L', '109 ': 'S', '110 ': 'I', '113 ': 'T', '114 ': 'H', '115 ': 'D', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGCTCGTAGCGCTC-1_contig_1 | ACTGCTCGTAGCGCTCATATGTTTCCTGTCTTTTATGGGCTCCAAACAGAGCTTCAGCAAGCATAGTGGGAATCTGCACCATGCCCTGGGCTCTGCTCCTCCTGACCCTCCTCACTCACTCTGCAGTGTCAGTGGTCCAGGCAGGGCTGACTCAGCCACCCTCGGTGTCCAAGGGCTTGAGACAGACCGCCACACTCACCTGCACTGGGAACAGCAACAATGTTGGCAACCAAGGAGCAGCTTGGCTGCAGCAGCACCAGGGCCACCCTCCCAAACTCCTATCCTACAGGAATAACAACCGGCCCTCAGGGATCTCAGAGAGATTCTCTGCATCCAGGTCAGGAAACACAGCCTCCCTGACCATTACTGGACTCCAGCCTGAGGACGAGGCTGACTATTACTGCTCAGCATGGGACAGCAGCCTCAGTGCTCAAGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV10-54*04 | null | IGLJ3*02 | CAGGCAGGGCTGACTCAGCCACCCTCGGTGTCCAAGGGCTTGAGACAGACCGCCACACTCACCTGCACTGGGAACAGCAACAATGTTGGCAACCAAGGAGCAGCTTGGCTGCAGCAGCACCAGGGCCACCCTCCCAAACTCCTATCCTACAGGAATAACAACCGGCCCTCAGGGATCTCAGAGAGATTCTCTGCATCCAGGTCAGGAAACACAGCCTCCCTGACCATTACTGGACTCCAGCCTGAGGACGAGGCTGACTATTACTGCTCAGCATGGGACAGCAGCCTCAGTGCTCAAGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGGCAGGGCTGACTCAGCCACCCTCGGTGTCCAAGGGCTTGAGACAGACCGCCACACTCACCTGCACTGGGAACAGCAACAATGTTGGCAACCAAGGAGCAGCTTGGCTGCAGCAGCACCAGGGCCACCCTCCCAAACTCCTATCCTACAGGAATAACAACCGGCCCTCAGGGATCTCAGAGAGATTCTCTGCATCCAGGTCAGGAAACACAGCCTCCCTGACCATTACTGGACTCCAGCCTGAGGACGAGGCTGACTATTACTGCTCAGCATGGGACAGCAGCCTCAGTGCTCANGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QAGLTQPPSVSKGLRQTATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNNRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSAWDSSLSAQVFGGGTKLTVL | QAGLTQPPSVSKGLRQTATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNNRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSAWDSSLSAXVFGGGTKLTVL | 1 | 296 | null | null | 298 | 331 | CAGGCAGGGCTGACTCAGCCACCCTCGGTGTCCAAGGGCTTGAGACAGACCGCCACACTCACCTGCACTGGGAACAGCAACAATGTTGGCAACCAAGGAGCAGCTTGGCTGCAGCAGCACCAGGGCCACCCTCCCAAACTCCTATCCTACAGGAATAACAACCGGCCCTCAGGGATCTCAGAGAGATTCTCTGCATCCAGGTCAGGAAACACAGCCTCCCTGACCATTACTGGACTCCAGCCTGAGGACGAGGCTGACTATTACTGCTCAGCATGGGACAGCAGCCTCAGTGCTCA | QAGLTQPPSVSKGLRQTATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNNRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSAWDSSLSA | CAGGCAGGGCTGACTCAGCCACCCTCGGTGTCCAAGGGCTTGAGACAGACCGCCACACTCACCTGCACTGGGAACAGCAACAATGTTGGCAACCAAGGAGCAGCTTGGCTGCAGCAGCACCAGGGCCACCCTCCCAAACTCCTATCCTACAGGAATAACAACCGGCCCTCAGGGATCTCAGAGAGATTCTCTGCATCCAGGTCAGGAAACACAGCCTCCCTGACCATTACTGGACTCCAGCCTGAGGACGAGGCTGACTATTACTGCTCAGCATGGGACAGCAGCCTCAGTGCTCA | QAGLTQPPSVSKGLRQTATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNNRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSAWDSSLSA | null | null | null | null | GTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | CAGGCAGGGCTGACTCAGCCACCCTCGGTGTCCAAGGGCTTGAGACAGACCGCCACACTCACCTGCACTGGGAAC | QAGLTQPPSVSKGLRQTATLTCTGN | AGCAACAATGTTGGCAACCAAGGA | SNNVGNQG | GCAGCTTGGCTGCAGCAGCACCAGGGCCACCCTCCCAAACTCCTATCCTAC | AAWLQQHQGHPPKLLSY | AGGAATAAC | RNN | AACCGGCCCTCAGGGATCTCAGAGAGATTCTCTGCATCCAGGTCAGGAAACACAGCCTCCCTGACCATTACTGGACTCCAGCCTGAGGACGAGGCTGACTATTACTGC | NRPSGISERFSASRSGNTASLTITGLQPEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | TCAGCATGGGACAGCAGCCTCAGTGCTCAAGTG | SAWDSSLSAQV | TGCTCAGCATGGGACAGCAGCCTCAGTGCTCAAGTGTTC | 39.0 | CSAWDSSLSAQVF | 13.0 | 463.037 | null | 66.059 | 137S296M246S | null | 434S4N34M211S | 3.2530000000000004e-132 | null | 8.631e-15 | 100.0 | null | 100.0 | 138 | 433 | 1 | 296 | null | null | null | null | 435 | 468 | 5 | 38 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 296 | 297 | 404 | 438.0 | 467.0 | 405.0 | 437.0 | A | 1 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'A', '3 ': 'G', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'K', '14 ': 'G', '15 ': 'L', '16 ': 'R', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'N'}, 'cdrl1': {'27 ': 'S', '28 ': 'N', '29 ': 'N', '30 ': 'V', '35 ': 'G', '36 ': 'N', '37 ': 'Q', '38 ': 'G'}, 'fwl2': {'39 ': 'A', '40 ': 'A', '41 ': 'W', '42 ': 'L', '43 ': 'Q', '44 ': 'Q', '45 ': 'H', '46 ': 'Q', '47 ': 'G', '48 ': 'H', '49 ': 'P', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'S', '55 ': 'Y'}, 'cdrl2': {'56 ': 'R', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'N', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'S', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'A', '79 ': 'S', '80 ': 'R', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'T', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'S', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'L', '114 ': 'S', '115 ': 'A', '116 ': 'Q', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGCTCGTCACAAGG-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGCGCCTAGGCTGGGAGGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD1-26*01 | IGHJ3*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGCGCCTAGGCTGGGAGGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGNNNNNNNNNTGGGAGGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARLGWEDAFDIWGQGTMVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAXXXWEDAFDIWGQGTMVTVSS | 1 | 291 | 301.0 | 306.0 | 307 | 355 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | TGGGAG | WE | TGGGAG | WE | GATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | GATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | DAFDIWGQGTMVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGCGCCTAGGCTGGGAGGATGCTTTTGATATC | ARLGWEDAFDI | TGTGCGCGCCTAGGCTGGGAGGATGCTTTTGATATCTGG | 39.0 | CARLGWEDAFDIW | 13.0 | 455.247 | 12.223 | 94.899 | 136S291M135S5N | 436S7N6M120S7N | 442S1N49M71S | 5.939e-130 | 52.63 | 1.4809999999999998e-23 | 100.0 | 100.0 | 100.0 | 137 | 427 | 1 | 291 | 437.0 | 442.0 | 8.0 | 13.0 | 443 | 491 | 2 | 50 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 458.0 | 490.0 | 425.0 | 457.0 | CGCCTAGGC | 9 | null | 0.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'L', '108 ': 'G', '109 ': 'W', '110 ': 'E', '113 ': 'D', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGCTCGTCACAAGG-1_contig_1 | AGAGCTCTGGAGAAGAGCTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCAACGGGGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-20*01 | null | IGKJ1*01 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCAACGGGGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCANNNNNGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSTGWTFGQGTKVEIK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSXXWTFGQGTKVEIK | 1 | 285 | null | null | 291 | 328 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCA | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSS | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCA | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSS | null | null | null | null | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPGTLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCAGCTAC | QSVSSSY | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAGTATGGTAGCTCAACGGGGTGGACG | QQYGSSTGWT | TGTCAGCAGTATGGTAGCTCAACGGGGTGGACGTTC | 36.0 | CQQYGSSTGWTF | 12.0 | 445.898 | null | 73.749 | 104S285M179S5N | null | 394S38M136S | 3.915e-127 | null | 3.483e-17 | 100.0 | null | 100.0 | 105 | 389 | 1 | 285 | null | null | null | null | 395 | 432 | 1 | 38 | 105 | 182 | 183 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 402.0 | 431.0 | 372.0 | 401.0 | ACGGG | 5 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'G', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'G', '109 ': 'S', '113 ': 'S', '114 ': 'T', '115 ': 'G', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGCTCGTCAGAAGC-1_contig_2 | CGAGCCCAGCACTGGAAGTCGCCGGTGTTTCCATTCGGTGATCATCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGATATGGGGTATGACTACGGTGACTCGTACCCGAAATACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30-3*01 | IGHD4-17*01 | IGHJ6*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGATATGGGGTATGACTACGGTGACTCGTACCCGAAATACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGANNNNNNNNNTGACTACGGTGACTNNNNNNNNNNNTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDMGYDYGDSYPKYYYYYGMDVWGQGTTVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXXXXDYGDXXXXYYYYYGMDVWGQGTTVTVSS | 1 | 296 | 306.0 | 319.0 | 331 | 390 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | TGACTACGGTGACT | DYGD | TGACTACGGTGACT | DYGD | TACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | TACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGCT | GFTFSSYA | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGCAATAAA | ISYDGSNK | TACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGATATGGGGTATGACTACGGTGACTCGTACCCGAAATACTACTACTACTACGGTATGGACGTC | ARDMGYDYGDSYPKYYYYYGMDV | TGTGCGAGAGATATGGGGTATGACTACGGTGACTCGTACCCGAAATACTACTACTACTACGGTATGGACGTCTGG | 75.0 | CARDMGYDYGDSYPKYYYYYGMDVW | 25.0 | 463.037 | 27.605 | 116.049 | 124S296M166S | 429S14M143S2N | 454S2N60M72S | 2.7870000000000002e-132 | 0.001287 | 6.645e-30 | 100.0 | 100.0 | 100.0 | 125 | 420 | 1 | 296 | 430.0 | 443.0 | 1.0 | 14.0 | 455 | 514 | 3 | 62 | 125 | 199 | 200 | 223 | 224 | 274 | 275 | 298 | 299 | 412 | 482.0 | 514.0 | 413.0 | 481.0 | TATGGGGTA | 9 | CGTACCCGAAA | 11.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'M', '109 ': 'G', '110 ': 'Y', '111 ': 'D', '111A': 'Y', '111B': 'G', '111C': 'D', '111D': 'S', '111E': 'Y', '112E': 'P', '112D': 'K', '112C': 'Y', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGCTCGTCAGAAGC-1_contig_1 | TCTTATATGGGGATCAGGACTCCTCAGTTCACCTTCTCACCATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCCCTGGATCCAGTGAGGATATTGTGATGACCCAGACTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCTTGGATAGTGATGATGGAAACACCTATTTGGACTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATACGCTTTCCTATCGGGCCTCTGGAGTCCCAGACAGGTTCAGTGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGAGTTTATTACTGCATGCAACGTATAGAGTTTCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV2-40*01 | null | IGKJ1*01 | GATATTGTGATGACCCAGACTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCTTGGATAGTGATGATGGAAACACCTATTTGGACTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATACGCTTTCCTATCGGGCCTCTGGAGTCCCAGACAGGTTCAGTGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGAGTTTATTACTGCATGCAACGTATAGAGTTTCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GATATTGTGATGACCCAGACTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCTTGGATAGTGATGATGGAAACACCTATTTGGACTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATACGCTTTCCTATCGGGCCTCTGGAGTCCCAGACAGGTTCAGTGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGAGTTTATTACTGCATGCAACGTATAGAGTTTCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIVMTQTPLSLPVTPGEPASISCRSSQSLLDSDDGNTYLDWYLQKPGQSPQLLIYTLSYRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQRIEFPWTFGQGTKVEIK | DIVMTQTPLSLPVTPGEPASISCRSSQSLLDSDDGNTYLDWYLQKPGQSPQLLIYTLSYRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQRIEFPWTFGQGTKVEIK | 1 | 302 | null | null | 303 | 340 | GATATTGTGATGACCCAGACTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCTTGGATAGTGATGATGGAAACACCTATTTGGACTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATACGCTTTCCTATCGGGCCTCTGGAGTCCCAGACAGGTTCAGTGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGAGTTTATTACTGCATGCAACGTATAGAGTTTCC | DIVMTQTPLSLPVTPGEPASISCRSSQSLLDSDDGNTYLDWYLQKPGQSPQLLIYTLSYRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQRIEFP | GATATTGTGATGACCCAGACTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCTTGGATAGTGATGATGGAAACACCTATTTGGACTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATACGCTTTCCTATCGGGCCTCTGGAGTCCCAGACAGGTTCAGTGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGAGTTTATTACTGCATGCAACGTATAGAGTTTCC | DIVMTQTPLSLPVTPGEPASISCRSSQSLLDSDDGNTYLDWYLQKPGQSPQLLIYTLSYRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQRIEFP | null | null | null | null | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GATATTGTGATGACCCAGACTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGT | DIVMTQTPLSLPVTPGEPASISCRSS | CAGAGCCTCTTGGATAGTGATGATGGAAACACCTAT | QSLLDSDDGNTY | TTGGACTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTAT | LDWYLQKPGQSPQLLIY | ACGCTTTCC | TLS | TATCGGGCCTCTGGAGTCCCAGACAGGTTCAGTGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAGGGTGGAGGCTGAGGATGTTGGAGTTTATTACTGC | YRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | ATGCAACGTATAGAGTTTCCGTGGACG | MQRIEFPWT | TGCATGCAACGTATAGAGTTTCCGTGGACGTTC | 33.0 | CMQRIEFPWTF | 11.0 | 472.386 | null | 73.749 | 101S302M174S3N | null | 403S38M136S | 4.206e-135 | null | 3.54e-17 | 100.0 | null | 100.0 | 102 | 403 | 1 | 302 | null | null | null | null | 404 | 441 | 1 | 38 | 102 | 179 | 180 | 215 | 216 | 266 | 267 | 275 | 276 | 383 | 411.0 | 440.0 | 384.0 | 410.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'T', '8 ': 'P', '9 ': 'L', '10 ': 'S', '11 ': 'L', '12 ': 'P', '13 ': 'V', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'P', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'L', '30 ': 'L', '31 ': 'D', '32 ': 'S', '33 ': 'D', '34 ': 'D', '35 ': 'G', '36 ': 'N', '37 ': 'T', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'D', '41 ': 'W', '42 ': 'Y', '43 ': 'L', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'Q', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'T', '57 ': 'L', '65 ': 'S'}, 'fwk3': {'66 ': 'Y', '67 ': 'R', '68 ': 'A', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'K', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'G', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'M', '106 ': 'Q', '107 ': 'R', '108 ': 'I', '109 ': 'E', '114 ': 'F', '115 ': 'P', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGCTCGTCTCTCGT-1_contig_1 | ACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACATCTGTGGTTCTTCCTCCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCAAGCAATCAATGGCTACAACACAAGGGCGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-61*02 | IGHD5-12*01 | IGHJ3*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCAAGCAATCAATGGCTACAACACAAGGGCGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGNNNNNNNTGGCTACNNNNNNNNNNNGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCASNQWLQHKGAFDIWGQGTMVTVSS | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAXXXWLXXXXAFDIWGQGTMVTVSS | 1 | 296 | 304.0 | 310.0 | 322 | 367 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCAAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGTATCTATACCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | TGGCTAC | WL | TGGCTAC | WL | GCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | GCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSQTLSLTCTVS | GGTGGCTCCATCAGCAGTGGTAGTTACTAC | GGSISSGSYY | TGGAGCTGGATCCGGCAGCCCGCCGGGAAGGGACTGGAGTGGATTGGGCGT | WSWIRQPAGKGLEWIGR | ATCTATACCAGTGGGAGCACC | IYTSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCAAGCAATCAATGGCTACAACACAAGGGCGCTTTTGATATC | ASNQWLQHKGAFDI | TGTGCAAGCAATCAATGGCTACAACACAAGGGCGCTTTTGATATCTGG | 48.0 | CASNQWLQHKGAFDIW | 16.0 | 459.921 | 14.146 | 89.131 | 92S296M142S3N | 395S10N7M128S6N | 413S4N46M71S | 2.186e-131 | 13.08 | 7.603e-22 | 99.662 | 100.0 | 100.0 | 93 | 388 | 1 | 296 | 396.0 | 402.0 | 11.0 | 17.0 | 414 | 459 | 5 | 50 | 93 | 167 | 168 | 197 | 198 | 248 | 249 | 269 | 270 | 383 | 426.0 | 458.0 | 384.0 | 425.0 | CAATCAA | 7 | AACACAAGGGC | 11.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'G', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'A', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'T', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'S', '107 ': 'N', '108 ': 'Q', '109 ': 'W', '110 ': 'L', '111 ': 'Q', '112A': 'H', '112 ': 'K', '113 ': 'G', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGCTCGTCTCTCGT-1_contig_2 | AGAGCTCTGGAGAAGAGCTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCCGGTCACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-20*01 | null | IGKJ2*01 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCCGGTCACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCCNNNCACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPPVTFGQGTKLEIK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPPXTFGQGTKLEIK | 1 | 290 | null | null | 294 | 328 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPP | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCTCC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPP | null | null | null | null | CACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | TFGQGTKLEIK | CACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | TFGQGTKLEIK | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPGTLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCAGCTAC | QSVSSSY | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAGCAGTATGGTAGCTCACCTCCGGTCACT | QQYGSSPPVT | TGTCAGCAGTATGGTAGCTCACCTCCGGTCACTTTT | 36.0 | CQQYGSSPPVTF | 12.0 | 453.689 | null | 67.981 | 104S290M174S | null | 397S4N35M136S | 1.768e-129 | null | 1.898e-15 | 100.0 | null | 100.0 | 105 | 394 | 1 | 290 | null | null | null | null | 398 | 432 | 5 | 39 | 105 | 182 | 183 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 402.0 | 431.0 | 372.0 | 401.0 | GGT | 3 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'G', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'G', '109 ': 'S', '113 ': 'S', '114 ': 'P', '115 ': 'P', '116 ': 'V', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGCTCGTGCCTGCA-1_contig_1 | ACCCAAAAACCACACCCCTCCTTGGGAGAATCCCCTAGATCACAGCTCCTCACCATGGACTGGACCTGGAGCATCCTTTTCTTGGTGGCAGCAGCAACAGGTGCCCACTCCCAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGATCAGGGTCCGCTGGGCCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-18*01 | IGHD6-13*01 | IGHJ5*02 | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGATCAGGGTCCGCTGGGCCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGANNNNNNNNNGCTGGNCCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDQGPLGPWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARXXXXLXPWGQGTLVTVSS | 1 | 296 | 306.0 | 310.0 | 312 | 349 | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAR | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAR | GCTGG | L | GCTGG | L | CCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | PWGQGTLVTVSS | CCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | PWGQGTLVTVSS | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGTTACACCTTTACCAGCTATGGT | GYTFTSYG | ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGG | ISWVRQAPGQGLEWMGW | ATCAGCGCTTACAATGGTAACACA | ISAYNGNT | AACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGATCAGGGTCCGCTGGGCCCC | ARDQGPLGP | TGTGCGAGAGATCAGGGTCCGCTGGGCCCCTGG | 33.0 | CARDQGPLGPW | 11.0 | 463.037 | 10.301 | 73.749 | 111S296M124S | 416S13N5M110S3N | 422S13N38M71S | 2.527e-132 | 188.3 | 3.252e-17 | 100.0 | 100.0 | 100.0 | 112 | 407 | 1 | 296 | 417.0 | 421.0 | 14.0 | 18.0 | 423 | 460 | 14 | 51 | 112 | 186 | 187 | 210 | 211 | 261 | 262 | 285 | 286 | 399 | 427.0 | 459.0 | 400.0 | 426.0 | TCAGGGTCC | 9 | G | 1.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'I', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'A', '59 ': 'Y', '62 ': 'N', '63 ': 'G', '64 ': 'N', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'L', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'T', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'R', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'Q', '109 ': 'G', '114 ': 'P', '115 ': 'L', '116 ': 'G', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGCTCGTGCCTGCA-1_contig_2 | AGAGCTCTGGAGAAGAGCTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCCGGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-20*01 | null | IGKJ1*01 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCCGGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCNNGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPGTFGQGTKVEIK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPXTFGQGTKVEIK | 1 | 287 | null | null | 290 | 325 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | null | null | null | null | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPGTLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCAGCTAC | QSVSSSY | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAGTATGGTAGCTCACCCGGGACG | QQYGSSPGT | TGTCAGCAGTATGGTAGCTCACCCGGGACGTTC | 33.0 | CQQYGSSPGTF | 11.0 | 449.014 | null | 69.904 | 104S287M174S3N | null | 393S2N36M136S | 4.49e-128 | null | 4.98e-16 | 100.0 | null | 100.0 | 105 | 391 | 1 | 287 | null | null | null | null | 394 | 429 | 3 | 38 | 105 | 182 | 183 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 399.0 | 428.0 | 372.0 | 398.0 | CG | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'G', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'G', '109 ': 'S', '114 ': 'S', '115 ': 'P', '116 ': 'G', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGCTCGTTCAGTAC-1_contig_1 | AGCTCTGGGAGAAGAGCCCCAGCCCCAGAATTCCCAGGAGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTTGTTGCTATTATAAAAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCAAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGATCCTGGATACAGCTATGGCACCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-11*01 | IGHD5-18*01 | IGHJ4*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCAAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGATCCTGGATACAGCTATGGCACCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCAAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGANNNTGGATACAGCTATGGNNNNNTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVESGGGLVKPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDPGYSYGTLDYWGQGTLVTVSS | QVQLVESGGGLVKPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARXXGYSYGXXDYWGQGTLVTVSS | 1 | 296 | 300.0 | 314.0 | 320 | 361 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCAAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVESGGGLVKPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCAAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVESGGGLVKPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | TGGATACAGCTATGG | GYSYG | TGGATACAGCTATGG | GYSYG | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCAAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACCTTCAGTGACTACTAC | GFTFSDYY | ATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATAC | MSWIRQAPGKGLEWVSY | ATTAGTAGTAGTGGTAGTACCATA | ISSSGSTI | TACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGT | YYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGATCCTGGATACAGCTATGGCACCCTTGACTAC | ARDPGYSYGTLDY | TGTGCGAGAGATCCTGGATACAGCTATGGCACCCTTGACTACTGG | 45.0 | CARDPGYSYGTLDYW | 15.0 | 463.037 | 29.528 | 81.44 | 137S296M136S | 436S1N15M118S4N | 456S6N42M71S | 2.717e-132 | 0.0003294 | 1.689e-19 | 100.0 | 100.0 | 100.0 | 138 | 433 | 1 | 296 | 437.0 | 451.0 | 2.0 | 16.0 | 457 | 498 | 7 | 48 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 465.0 | 497.0 | 426.0 | 464.0 | TCC | 3 | CACCC | 5.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'D', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'S', '59 ': 'S', '62 ': 'G', '63 ': 'S', '64 ': 'T', '65 ': 'I'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'P', '109 ': 'G', '110 ': 'Y', '111 ': 'S', '112 ': 'Y', '113 ': 'G', '114 ': 'T', '115 ': 'L', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGCTCGTTCAGTAC-1_contig_2 | TGGGAGGAGTCAGTCCCAACCAGGACACAGCATGGACATGAGGGTCCCTGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCTCAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCTCCGGCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-33*01 | null | IGKJ4*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCTCCGGCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCTCCNNNGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPPALTFGGGTKVEIK | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPPXLTFGGGTKVEIK | 1 | 287 | null | null | 291 | 328 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCTCC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGACATTAGCAACTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTACGATGCATCCAATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGTCAACAGTATGATAATCTCCCTCC | DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPP | null | null | null | null | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | LTFGGGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGT | DIQMTQSPSSLSASVGDRVTITCQAS | CAGGACATTAGCAACTAT | QDISNY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAC | LNWYQQKPGKAPKLLIY | GATGCATCC | DAS | AATTTGGAAACAGGGGTCCCATCAAGGTTCAGTGGAAGTGGATCTGGGACAGATTTTACTTTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCAACATATTACTGT | NLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAACAGTATGATAATCTCCCTCCGGCGCTCACT | QQYDNLPPALT | TGTCAACAGTATGATAATCTCCCTCCGGCGCTCACTTTC | 39.0 | CQQYDNLPPALTF | 13.0 | 449.014 | null | 73.749 | 97S287M177S | null | 387S38M136S | 4.4570000000000006e-128 | null | 3.44e-17 | 100.0 | null | 100.0 | 98 | 384 | 1 | 287 | null | null | null | null | 388 | 425 | 1 | 38 | 98 | 175 | 176 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 395.0 | 424.0 | 362.0 | 394.0 | GGC | 3 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'Q', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'D', '29 ': 'I', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'L', '68 ': 'E', '69 ': 'T', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'F', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'I', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'D', '109 ': 'N', '110 ': 'L', '113 ': 'P', '114 ': 'P', '115 ': 'A', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGCTCTCCTAGTGA-1_contig_1 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTACGGCCCTGGGGGATATTGTACCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD2-15*01 | IGHJ5*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTACGGCCCTGGGGGATATTGTACCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGNNNNNNNNGGATATTGTACCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCTALGDIVPWGQGTLVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAXXXDIVPWGQGTLVTVSS | 1 | 291 | 300.0 | 309.0 | 310 | 346 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTACG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCT | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | GGATATTGTA | DIV | GGATATTGTA | DIV | CCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | PWGQGTLVTVSS | CCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | PWGQGTLVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | ACGGCCCTGGGGGATATTGTACCC | TALGDIVP | TGTACGGCCCTGGGGGATATTGTACCCTGG | 30.0 | CTALGDIVPW | 10.0 | 452.13 | 19.914 | 71.827 | 136S291M126S5N | 435S1N10M108S20N | 445S14N37M71S | 5.063e-129 | 0.2506 | 1.285e-16 | 99.656 | 100.0 | 100.0 | 137 | 427 | 1 | 291 | 436.0 | 445.0 | 2.0 | 11.0 | 446 | 482 | 15 | 51 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 449.0 | 481.0 | 425.0 | 448.0 | GCCCTGGG | 8 | null | 0.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'T', '106 ': 'A', '107 ': 'L', '108 ': 'G', '114 ': 'D', '115 ': 'I', '116 ': 'V', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGCTCTCCTAGTGA-1_contig_2 | GTGGGCTCAGGAGGCAGAGCTCTGGGAATCTCACCATGGCCTGGACCCCTCTCCTGCTCCCCCTCCTCACTTTCTGCACAGTCTCTGAGGCCTCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATTCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATCATAGGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-10*01 | null | IGLJ2*01 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATTCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATCATAGGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATCATAGGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPPSVSVSPGQTARITCSGDALPKKYSYWYQQKSGQAPVLVIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCYSTDSSGNHRVFGGGTKLTVL | SYELTQPPSVSVSPGQTARITCSGDALPKKYAYWYQQKSGQAPVLVIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCYSTDSSGNHRVFGGGTKLTVL | 1 | 290 | null | null | 291 | 325 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATTCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATCATAG | SYELTQPPSVSVSPGQTARITCSGDALPKKYSYWYQQKSGQAPVLVIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCYSTDSSGNH | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAAAAATATGCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTATGAGGACAGCAAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGTTACTCAACAGACAGCAGTGGTAATCATAG | SYELTQPPSVSVSPGQTARITCSGDALPKKYAYWYQQKSGQAPVLVIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCYSTDSSGNH | null | null | null | null | GGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAAACGGCCAGGATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTARITCSGD | GCATTGCCAAAAAAATAT | ALPKKY | TCTTATTGGTACCAGCAGAAGTCAGGCCAGGCCCCTGTGCTGGTCATCTAT | SYWYQQKSGQAPVLVIY | GAGGACAGC | EDS | AAACGACCCTCCGGGATCCCTGAGAGATTCTCTGGCTCCAGCTCAGGGACAATGGCCACCTTGACTATCAGTGGGGCCCAGGTGGAGGATGAAGCTGACTACTACTGT | KRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | TACTCAACAGACAGCAGTGGTAATCATAGGGTA | YSTDSSGNHRV | TGTTACTCAACAGACAGCAGTGGTAATCATAGGGTATTC | 39.0 | CYSTDSSGNHRVF | 13.0 | 450.572 | null | 67.981 | 92S290M246S | null | 382S3N35M211S | 1.695e-128 | null | 2.103e-15 | 99.655 | null | 100.0 | 93 | 382 | 1 | 290 | null | null | null | null | 383 | 417 | 4 | 38 | 93 | 167 | 168 | 185 | 186 | 236 | 237 | 245 | 246 | 353 | 387.0 | 416.0 | 354.0 | 386.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'A', '28 ': 'L', '29 ': 'P', '36 ': 'K', '37 ': 'K', '38 ': 'Y'}, 'fwl2': {'39 ': 'S', '40 ': 'Y', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'S', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'S', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'M', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'A', '95 ': 'Q', '96 ': 'V', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Y', '106 ': 'S', '107 ': 'T', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'G', '114 ': 'N', '115 ': 'H', '116 ': 'R', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGCTCTCGGCGGTT-1_contig_1 | TTACATGGGGATCACTCAACAACCACATCTGTCCTCTAGAGAAAACCCTGTGAGCACAGCTCCTCACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCTACAAGTGCCCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGGCGATGATAGTACCTACAGTTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-8*01 | IGHD3-22*01 | IGHJ6*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGGCGATGATAGTACCTACAGTTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGGNNATGATAGTANNNNNNNNTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQATGQGLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYCARGDDSTYSYYYYGMDVWGQGTTVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQATGQGLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYCARGXDSXXXYYYYGMDVWGQGTTVTVSS | 1 | 296 | 299.0 | 307.0 | 316 | 372 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQATGQGLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYCARG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDINWVRQATGQGLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYCARG | ATGATAGTA | DS | ATGATAGTA | DS | TACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | TACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCAGTTATGAT | GYTFTSYD | ATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGG | INWVRQATGQGLEWMGW | ATGAACCCTAACAGTGGTAACACA | MNPNSGNT | GGCTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | GYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGGCGATGATAGTACCTACAGTTACTACTACTACGGTATGGACGTC | ARGDDSTYSYYYYGMDV | TGTGCGAGAGGCGATGATAGTACCTACAGTTACTACTACTACGGTATGGACGTCTGG | 57.0 | CARGDDSTYSYYYYGMDVW | 19.0 | 463.037 | 17.992 | 110.281 | 125S296M148S | 423S8N9M137S14N | 440S5N57M72S | 2.717e-132 | 0.9781 | 3.514e-28 | 100.0 | 100.0 | 100.0 | 126 | 421 | 1 | 296 | 424.0 | 432.0 | 9.0 | 17.0 | 441 | 497 | 6 | 62 | 126 | 200 | 201 | 224 | 225 | 275 | 276 | 299 | 300 | 413 | 465.0 | 497.0 | 414.0 | 464.0 | CG | 2 | CCTACAGT | 8.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'D'}, 'fwh2': {'39 ': 'I', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'T', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'M', '57 ': 'N', '58 ': 'P', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'N', '65 ': 'T'}, 'fwh3': {'66 ': 'G', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'N', '82 ': 'T', '83 ': 'S', '84 ': 'I', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'D', '109 ': 'D', '110 ': 'S', '111 ': 'T', '111A': 'Y', '111B': 'S', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGCTCTCGGCGGTT-1_contig_2 | TGGGGGATCAGGACTCCTCAGTTCACCTTCTCACAATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCTCTGGATCCAGTGGGGATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCCTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV2-28*01 | null | IGKJ1*01 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCCTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCNTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPWTFGQGTKVEIK | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPWTFGQGTKVEIK | 1 | 299 | null | null | 301 | 337 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTP | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTP | null | null | null | null | TGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | TGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGT | DIVMTQSPLSLPVTPGEPASISCRSS | CAGAGCCTCCTGCATAGTAATGGATACAACTAT | QSLLHSNGYNY | TTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTAT | LDWYLQKPGQSPQLLIY | TTGGGTTCT | LGS | AATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGC | NRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | ATGCAAGCTCTACAAACTCCCTGGACG | MQALQTPWT | TGCATGCAAGCTCTACAAACTCCCTGGACGTTC | 33.0 | CMQALQTPWTF | 11.0 | 467.712 | null | 71.827 | 95S299M174S3N | null | 395S1N37M136S | 1.062e-133 | null | 1.321e-16 | 100.0 | null | 100.0 | 96 | 394 | 1 | 299 | null | null | null | null | 396 | 432 | 2 | 38 | 96 | 173 | 174 | 206 | 207 | 257 | 258 | 266 | 267 | 374 | 402.0 | 431.0 | 375.0 | 401.0 | C | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'L', '10 ': 'S', '11 ': 'L', '12 ': 'P', '13 ': 'V', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'P', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'L', '30 ': 'L', '31 ': 'H', '32 ': 'S', '34 ': 'N', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'D', '41 ': 'W', '42 ': 'Y', '43 ': 'L', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'Q', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'L', '57 ': 'G', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'K', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'G', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'M', '106 ': 'Q', '107 ': 'A', '108 ': 'L', '109 ': 'Q', '114 ': 'T', '115 ': 'P', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGCTCTCGTAGGAG-1_contig_1 | ATCACATAACAACCACATTCCTCCTCTAAAGAAGCCCCTGGGAGCACAGCTCATCACCATGGACTGGACCTGGAGGTTCCTCTTTGTGGTGGCAGCAGCTACAGGTGTCCAGTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGTCTTCAGATTTTTGGAGTGGATACTCCCTACTCCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-69*01 | IGHD3-3*01 | IGHJ6*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGTCTTCAGATTTTTGGAGTGGATACTCCCTACTCCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGNNNNNNGATTTTTGGAGTGGNNNNNNNCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCASLQIFGVDTPYSYGMDVWGQGTTVTVSS | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCAXXXIFGVXXXYYYGMDVWGQGTTVTVSS | 1 | 293 | 300.0 | 313.0 | 321 | 375 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAG | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCA | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAG | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCA | GATTTTTGGAGTGG | IFGV | GATTTTTGGAGTGG | IFGV | CTACTCCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YSYGMDVWGQGTTVTVSS | CTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGSSVKVSCKAS | GGAGGCACCTTCAGCAGCTATGCT | GGTFSSYA | ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGG | ISWVRQAPGQGLEWMGG | ATCATCCCTATCTTTGGTACAGCA | IIPIFGTA | AACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | NYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGTCTTCAGATTTTTGGAGTGGATACTCCCTACTCCTACGGTATGGACGTC | ASLQIFGVDTPYSYGMDV | TGTGCGAGTCTTCAGATTTTTGGAGTGGATACTCCCTACTCCTACGGTATGGACGTCTGG | 60.0 | CASLQIFGVDTPYSYGMDVW | 20.0 | 458.363 | 27.605 | 100.667 | 115S293M154S3N | 414S7N14M134S10N | 435S7N55M72S | 6.849e-131 | 0.001233 | 2.718e-25 | 100.0 | 100.0 | 98.182 | 116 | 408 | 1 | 293 | 415.0 | 428.0 | 8.0 | 21.0 | 436 | 490 | 8 | 62 | 116 | 190 | 191 | 214 | 215 | 265 | 266 | 289 | 290 | 403 | 458.0 | 490.0 | 404.0 | 457.0 | TCTTCA | 6 | ATACTCC | 7.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'S', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'I', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'G'}, 'cdrh2': {'56 ': 'I', '57 ': 'I', '58 ': 'P', '59 ': 'I', '62 ': 'F', '63 ': 'G', '64 ': 'T', '65 ': 'A'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'A', '81 ': 'D', '82 ': 'E', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'S', '107 ': 'L', '108 ': 'Q', '109 ': 'I', '110 ': 'F', '111 ': 'G', '111A': 'V', '111B': 'D', '112C': 'T', '112B': 'P', '112A': 'Y', '112 ': 'S', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGCTCTCGTAGGAG-1_contig_2 | GATCAGGACTCCTCAGTTCACCTTCTCACAATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCTCTGGATCCAGTGGGGATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV2-28*01 | null | IGKJ4*01 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTLTFGGGTKVEIK | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTLTFGGGTKVEIK | 1 | 298 | null | null | 299 | 334 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQT | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQT | null | null | null | null | TCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | TCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGT | DIVMTQSPLSLPVTPGEPASISCRSS | CAGAGCCTCCTGCATAGTAATGGATACAACTAT | QSLLHSNGYNY | TTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTAT | LDWYLQKPGQSPQLLIY | TTGGGTTCT | LGS | AATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGC | NRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | ATGCAAGCTCTACAAACTCTCACT | MQALQTLT | TGCATGCAAGCTCTACAAACTCTCACTTTC | 30.0 | CMQALQTLTF | 10.0 | 466.153 | null | 69.904 | 90S298M172S4N | null | 388S2N36M136S | 3.082e-133 | null | 4.935e-16 | 100.0 | null | 100.0 | 91 | 388 | 1 | 298 | null | null | null | null | 389 | 424 | 3 | 38 | 91 | 168 | 169 | 201 | 202 | 252 | 253 | 261 | 262 | 369 | 394.0 | 423.0 | 370.0 | 393.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'L', '10 ': 'S', '11 ': 'L', '12 ': 'P', '13 ': 'V', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'P', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'L', '30 ': 'L', '31 ': 'H', '32 ': 'S', '34 ': 'N', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'D', '41 ': 'W', '42 ': 'Y', '43 ': 'L', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'Q', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'L', '57 ': 'G', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'K', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'G', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'M', '106 ': 'Q', '107 ': 'A', '108 ': 'L', '114 ': 'Q', '115 ': 'T', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGCTCTCTAACTTC-1_contig_1 | ACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACATCTGTGGTTCTTCCTTCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGGGGGCGTGGCTGGGACGAAATTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-59*01 | IGHD6-19*01 | IGHJ4*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGGGGGCGTGGCTGGGACGAAATTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGNNNNNNGTGGCTGGNNNNNNNNNTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGGRGWDEIFDYWGQGTLVTVSS | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXXGWXXXFDYWGQGTLVTVSS | 1 | 292 | 299.0 | 306.0 | 316 | 358 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | GTGGCTGG | GW | GTGGCTGG | GW | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGTAGTTACTAC | GGSISSYY | TGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTAT | WSWIRQPPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGGGGGGCGTGGCTGGGACGAAATTTTTGACTAC | ARGGRGWDEIFDY | TGTGCGAGAGGGGGGCGTGGCTGGGACGAAATTTTTGACTACTGG | 45.0 | CARGGRGWDEIFDYW | 15.0 | 456.805 | 16.069 | 83.363 | 92S292M137S1N | 390S10N8M123S3N | 407S5N43M71S | 1.862e-130 | 3.39 | 4.072e-20 | 100.0 | 100.0 | 100.0 | 93 | 384 | 1 | 292 | 391.0 | 398.0 | 11.0 | 18.0 | 408 | 450 | 6 | 48 | 93 | 167 | 168 | 191 | 192 | 242 | 243 | 263 | 264 | 377 | 417.0 | 449.0 | 378.0 | 416.0 | GGGGGC | 6 | GACGAAATT | 9.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'G', '109 ': 'R', '110 ': 'G', '111 ': 'W', '112 ': 'D', '113 ': 'E', '114 ': 'I', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGCTCTCTAACTTC-1_contig_2 | ATCTCCTCCAGCAGCAGCCTCTGACTCTGCTGATTTGCATCATGGGCCGCTCTCTCCAGCAAGGGGATAAGAGAGGCCTGGGAGGAACCTGCTCAGTCTGGGCCTAAGGAAGCAGCACTGGTGGTGCCTCAGCCATGGCCTGGACCGTTCTCCTCCTCGGCCTCCTCTCTCACTGCACAGGCTCTGTGACCTCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-21*02 | null | IGLJ2*01 | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHVVFGGGTKLTVL | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHVVFGGGTKLTVL | 1 | 288 | null | null | 289 | 325 | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCAT | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDH | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAACAACATTGGAAGTAAAAGTGTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGTCAGGTGTGGGATAGTAGTAGTGATCAT | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDH | null | null | null | null | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGACAGACGGCCAGGATTACCTGTGGGGGAAAC | SYVLTQPPSVSVAPGQTARITCGGN | AACATTGGAAGTAAAAGT | NIGSKS | GTGCACTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCGTCTAT | VHWYQQKPGQAPVLVVY | GATGATAGC | DDS | GACCGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGGAACACGGCCACCCTGACCATCAGCAGGGTCGAAGCCGGGGATGAGGCCGACTATTACTGT | DRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAGGTGTGGGATAGTAGTAGTGATCATGTGGTA | QVWDSSSDHVV | TGTCAGGTGTGGGATAGTAGTAGTGATCATGTGGTATTC | 39.0 | CQVWDSSSDHVVF | 13.0 | 450.572 | null | 71.827 | 191S288M248S2N | null | 479S1N37M211S | 1.975e-128 | null | 1.698e-16 | 100.0 | null | 100.0 | 192 | 479 | 1 | 288 | null | null | null | null | 480 | 516 | 2 | 38 | 192 | 266 | 267 | 284 | 285 | 335 | 336 | 344 | 345 | 452 | 486.0 | 515.0 | 453.0 | 485.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'A', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'G', '25 ': 'G', '26 ': 'N'}, 'cdrl1': {'27 ': 'N', '28 ': 'I', '29 ': 'G', '36 ': 'S', '37 ': 'K', '38 ': 'S'}, 'fwl2': {'39 ': 'V', '40 ': 'H', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'V', '55 ': 'Y'}, 'cdrl2': {'56 ': 'D', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'D', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'N', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'G', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'V', '107 ': 'W', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'S', '114 ': 'D', '115 ': 'H', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGCTCTCTATCCTA-1_contig_2 | GAGCTCTGGGAGAGGAGCCCAGCACTAGAAGTCGGCGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGGAGGGTATTACGATATTCCCCCAGAGGGTCCTTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-33*01 | IGHD3-9*01 | IGHJ6*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGGAGGGTATTACGATATTCCCCCAGAGGGTCCTTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGNNNNGTATTACGATATTNNNNNNNNNNNNNNTTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGGYYDIPPEGPYYYYYGMDVWGQGTTVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXXYYDIXXXXXYYYYYGMDVWGQGTTVTVSS | 1 | 295 | 300.0 | 312.0 | 327 | 387 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | GTATTACGATATT | YYDI | GTATTACGATATT | YYDI | TTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | TTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYYGMDVWGQGTTVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGGC | GFTFSSYG | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATGGTATGATGGAAGTAATAAA | IWYDGSNK | TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGGAGGGTATTACGATATTCCCCCAGAGGGTCCTTACTACTACTACTACGGTATGGACGTC | ARGGYYDIPPEGPYYYYYGMDV | TGTGCGAGAGGAGGGTATTACGATATTCCCCCAGAGGGTCCTTACTACTACTACTACGGTATGGACGTCTGG | 72.0 | CARGGYYDIPPEGPYYYYYGMDVW | 24.0 | 461.479 | 25.682 | 117.971 | 137S295M164S1N | 436S13M147S18N | 463S1N61M72S | 8.355000000000001e-132 | 0.004963 | 1.783e-30 | 100.0 | 100.0 | 100.0 | 138 | 432 | 1 | 295 | 437.0 | 449.0 | 1.0 | 13.0 | 464 | 524 | 2 | 62 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 492.0 | 524.0 | 426.0 | 491.0 | GAGG | 4 | CCCCCAGAGGGTCC | 14.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'W', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'G', '109 ': 'Y', '110 ': 'Y', '111 ': 'D', '111A': 'I', '111B': 'P', '111C': 'P', '111D': 'E', '112E': 'G', '112D': 'P', '112C': 'Y', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGCTCTCTATCCTA-1_contig_1 | TGGGGAGGAGTCAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCTGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ1*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCTGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCNGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPLTFGQGTKVEIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPXTFGQGTKVEIK | 1 | 286 | null | null | 288 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTP | null | null | null | null | GACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | TFGQGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAACAGAGTTACAGTACCCCTCTGACG | QQSYSTPLT | TGTCAACAGAGTTACAGTACCCCTCTGACGTTC | 33.0 | CQQSYSTPLTF | 11.0 | 447.456 | null | 67.981 | 98S286M172S1N | null | 385S3N35M136S | 1.3e-127 | null | 1.857e-15 | 100.0 | null | 100.0 | 99 | 384 | 1 | 286 | null | null | null | null | 386 | 420 | 4 | 38 | 99 | 176 | 177 | 194 | 195 | 245 | 246 | 254 | 255 | 362 | 390.0 | 419.0 | 363.0 | 389.0 | T | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGCTCTCTGATTCT-1_contig_2 | AGCTCTGAGAGAGGAGCCTTAGCCCTGGATTCCAAGGCCTATCCACTTGGTGATCAGCACTGAGCACCGAGGATTCACCATGGAACTGGGGCTCCGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGTAGGGGGTTTGGGGGAGTTATCGCCTATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-21*01 | IGHD3-16*02 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGTAGGGGGTTTGGGGGAGTTATCGCCTATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGNNNNNNGTTTGGGGGAGTTATCGNNNNTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARVGGLGELSPIDYWGQGTLVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARXXXLGELSXXDYWGQGTLVTVSS | 1 | 295 | 302.0 | 318.0 | 323 | 364 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GTTTGGGGGAGTTATCG | LGELS | GTTTGGGGGAGTTATCG | LGELS | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACCTTCAGTAGCTATAGC | GFTFSSYS | ATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCC | MNWVRQAPGKGLEWVSS | ATTAGTAGTAGTAGTAGTTACATA | ISSSSSYI | TACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGTAGGGGGTTTGGGGGAGTTATCGCCTATTGACTAC | ARVGGLGELSPIDY | TGTGCGAGAGTAGGGGGTTTGGGGGAGTTATCGCCTATTGACTACTGG | 48.0 | CARVGGLGELSPIDYW | 16.0 | 461.479 | 33.373 | 81.44 | 136S295M140S1N | 437S13N17M117S7N | 458S6N42M71S | 8.032e-132 | 2.3e-05 | 1.695e-19 | 100.0 | 100.0 | 100.0 | 137 | 431 | 1 | 295 | 438.0 | 454.0 | 14.0 | 30.0 | 459 | 500 | 7 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 467.0 | 499.0 | 425.0 | 466.0 | TAGGGG | 6 | CCTA | 4.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'S'}, 'fwh2': {'39 ': 'M', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'S', '59 ': 'S', '62 ': 'S', '63 ': 'S', '64 ': 'Y', '65 ': 'I'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'V', '108 ': 'G', '109 ': 'G', '110 ': 'L', '111 ': 'G', '112A': 'E', '112 ': 'L', '113 ': 'S', '114 ': 'P', '115 ': 'I', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGCTCTCTGATTCT-1_contig_1 | GCTCTGCTTCAGCTGTGGGCACAAGAGGCAGCACTCAGGACAATCTCCAGCATGGCCTGGTCTCCTCTCCTCCTCACTCTCCTCGCTCACTGCACAGGGTCCTGGGCCCAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCTGCCGGGTCGAAGGGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAGGTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-40*01 | null | IGLJ1*01 | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCTGCCGGGTCGAAGGGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCTGNNNNNNNNNNNNGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLPGRRVFGTGTKVTVL | QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLXXXXVFGTGTKVTVL | 1 | 291 | null | null | 304 | 337 | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCTG | QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSL | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTATGGTAACAGCAATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCTG | QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSL | null | null | null | null | GTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | VFGTGTKVTVL | GTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | VFGTGTKVTVL | CAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGC | QSVLTQPPSVSGAPGQRVTISCTGS | AGCTCCAACATCGGGGCAGGTTATGAT | SSNIGAGYD | GTACACTGGTACCAGCAGCTTCCAGGAACAGCCCCCAAACTCCTCATCTAT | VHWYQQLPGTAPKLLIY | GGTAACAGC | GNS | AATCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCACTGGGCTCCAGGCTGAGGATGAGGCTGATTATTACTGC | NRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYC | TTCGGAACTGGGACCAAGGTCACCGTCCTA | FGTGTKVTVL | CAGTCCTATGACAGCAGCCTGCCGGGTCGAAGGGTC | QSYDSSLPGRRV | TGCCAGTCCTATGACAGCAGCCTGCCGGGTCGAAGGGTCTTC | 42.0 | CQSYDSSLPGRRVF | 14.0 | 455.247 | null | 66.059 | 108S291M257S8N | null | 411S4N34M211S | 6.947e-130 | null | 8.334e-15 | 100.0 | null | 100.0 | 109 | 399 | 1 | 291 | null | null | null | null | 412 | 445 | 5 | 38 | 109 | 183 | 184 | 210 | 211 | 261 | 262 | 270 | 271 | 378 | 415.0 | 444.0 | 379.0 | 414.0 | CCGGGTCGAAGG | 12 | null | null | GTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'G', '14 ': 'A', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '31 ': 'G', '35 ': 'A', '36 ': 'G', '37 ': 'Y', '38 ': 'D'}, 'fwl2': {'39 ': 'V', '40 ': 'H', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'G', '57 ': 'N', '65 ': 'S'}, 'fwl3': {'66 ': 'N', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'A', '91 ': 'I', '92 ': 'T', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'S', '107 ': 'Y', '108 ': 'D', '109 ': 'S', '110 ': 'S', '112 ': 'L', '113 ': 'P', '114 ': 'G', '115 ': 'R', '116 ': 'R', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'T', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGTCCAGAAGAAGC-1_contig_2 | ATACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACATCTGTGGTTCTTCCTTCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTCTCGGGTATAGCAGCTCGCTCGTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-59*01 | IGHD6-6*01 | IGHJ4*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTCTCGGGTATAGCAGCTCGCTCGTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGNNNNNNGTATAGCAGCTCGNNNNTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARVSGIAARSFDYWGQGTLVTVSS | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXXIAARXFDYWGQGTLVTVSS | 1 | 292 | 299.0 | 311.0 | 316 | 358 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAG | QVQLQESGPGLVKPSETLSLTCTVSGGSISSYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | GTATAGCAGCTCG | IAAR | GTATAGCAGCTCG | IAAR | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSETLSLTCTVS | GGTGGCTCCATCAGTAGTTACTAC | GGSISSYY | TGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTAT | WSWIRQPPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | AACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGT | NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGTCTCGGGTATAGCAGCTCGCTCGTTTGACTAC | ARVSGIAARSFDY | TGTGCGAGAGTCTCGGGTATAGCAGCTCGCTCGTTTGACTACTGG | 45.0 | CARVSGIAARSFDYW | 15.0 | 456.805 | 25.682 | 83.363 | 94S292M137S1N | 392S2N13M118S3N | 409S5N43M71S | 1.8689999999999998e-130 | 0.004344 | 4.0880000000000005e-20 | 100.0 | 100.0 | 100.0 | 95 | 386 | 1 | 292 | 393.0 | 405.0 | 3.0 | 15.0 | 410 | 452 | 6 | 48 | 95 | 169 | 170 | 193 | 194 | 244 | 245 | 265 | 266 | 379 | 419.0 | 451.0 | 380.0 | 418.0 | TCTCGG | 6 | CTCG | 4.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'E', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'V', '108 ': 'S', '109 ': 'G', '110 ': 'I', '111 ': 'A', '112 ': 'A', '113 ': 'R', '114 ': 'S', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGTCCAGAAGAAGC-1_contig_1 | AGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTTCCAGATGCGACATCCAGATGACCCAGTCTCCATCTTCTGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACTATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCCGCTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1D-12*01 | null | IGKJ4*01 | GACATCCAGATGACCCAGTCTCCATCTTCTGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACTATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCCGCTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCTTCTGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACTATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCNNCTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFPAFGGGTKVEIK | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFPXFGGGTKVEIK | 1 | 284 | null | null | 287 | 319 | GACATCCAGATGACCCAGTCTCCATCTTCTGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACTATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCC | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFP | GACATCCAGATGACCCAGTCTCCATCTTCTGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACTATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCC | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFP | null | null | null | null | CTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | FGGGTKVEIK | CTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | FGGGTKVEIK | GACATCCAGATGACCCAGTCTCCATCTTCTGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGT | DIQMTQSPSSVSASVGDRVTITCRAS | CAGGGTATTAGCAGCTGG | QGISSW | TTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACTATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAACAGGCTAACAGTTTCCCCGCT | QQANSFPA | TGTCAACAGGCTAACAGTTTCCCCGCTTTC | 30.0 | CQQANSFPAF | 10.0 | 444.34 | null | 64.136 | 93S284M171S3N | null | 379S5N33M136S | 1.1099999999999999e-126 | null | 2.631e-14 | 100.0 | null | 100.0 | 94 | 377 | 1 | 284 | null | null | null | null | 380 | 412 | 6 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 382.0 | 411.0 | 358.0 | 381.0 | CG | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'W'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'A', '108 ': 'N', '114 ': 'S', '115 ': 'F', '116 ': 'P', '117 ': 'A'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGTCCAGACAGACC-1_contig_2 | GAGCTCTGGGAGAGGAGCCCAGCACTAGAAGTCGGCGGTGTTTCCATTCGGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGCTAGGATATTGTAGTAGTACCAGCTGCTATGGTCACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-33*01 | IGHD2-2*01 | IGHJ6*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGCTAGGATATTGTAGTAGTACCAGCTGCTATGGTCACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGANNNAGGATATTGTAGTAGTACCAGCTGCTATGNNNACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARELGYCSSTSCYGHGMDVWGQGTTVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXXGYCSSTSCYXXGMDVWGQGTTVTVSS | 1 | 296 | 300.0 | 328.0 | 332 | 378 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | AGGATATTGTAGTAGTACCAGCTGCTATG | GYCSSTSCY | AGGATATTGTAGTAGTACCAGCTGCTATG | GYCSSTSCY | ACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GMDVWGQGTTVTVSS | ACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GMDVWGQGTTVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGGC | GFTFSSYG | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATGGTATGATGGAAGTAATAAA | IWYDGSNK | TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGAGCTAGGATATTGTAGTAGTACCAGCTGCTATGGTCACGGTATGGACGTC | ARELGYCSSTSCYGHGMDV | TGTGCGAGAGAGCTAGGATATTGTAGTAGTACCAGCTGCTATGGTCACGGTATGGACGTCTGG | 63.0 | CARELGYCSSTSCYGHGMDVW | 21.0 | 463.037 | 56.445 | 91.054 | 137S296M154S | 436S29M122S2N | 468S15N47M72S | 2.7920000000000002e-132 | 2.682e-12 | 2.226e-22 | 100.0 | 100.0 | 100.0 | 138 | 433 | 1 | 296 | 437.0 | 465.0 | 1.0 | 29.0 | 469 | 515 | 16 | 62 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 311 | 312 | 425 | 483.0 | 515.0 | 426.0 | 482.0 | GCT | 3 | GTC | 3.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'W', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'E', '108 ': 'L', '109 ': 'G', '110 ': 'Y', '111 ': 'C', '111A': 'S', '111B': 'S', '111C': 'T', '112C': 'S', '112B': 'C', '112A': 'Y', '112 ': 'G', '113 ': 'H', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGTCCAGACAGACC-1_contig_1 | GCTGGGGTCTCAGGAGGCAGCGCTCTCAGGACATCTCCACCATGGCCTGGGCTCTGCTGCTCCTCACCCTCCTCACTCAGGGCACAGGGTCCTGGGCCCAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCATCCCCTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAGGTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV2-14*01 | null | IGLJ1*01 | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCATCCCCTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCANNNNNTATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSIPYVFGTGTKVTVL | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSXXYVFGTGTKVTVL | 1 | 292 | null | null | 298 | 334 | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCA | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSS | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTTGGTGGTTATAACTATGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAAGCAGCAGCA | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSS | null | null | null | null | TATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | YVFGTGTKVTVL | TATGTCTTCGGAACTGGGACCAAGGTCACCGTCCTAG | YVFGTGTKVTVL | CAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACC | QSALTQPASVSGSPGQSITISCTGT | AGCAGTGACGTTGGTGGTTATAACTAT | SSDVGGYNY | GTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTAT | VSWYQQHPGKAPKLMIY | GAGGTCAGT | EVS | AATCGGCCCTCAGGGGTTTCTAATCGCTTCTCTGGCTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGC | NRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYC | TTCGGAACTGGGACCAAGGTCACCGTCCTA | FGTGTKVTVL | AGCTCATATACAAGCAGCAGCATCCCCTATGTC | SSYTSSSIPYV | TGCAGCTCATATACAAGCAGCAGCATCCCCTATGTCTTC | 39.0 | CSSYTSSSIPYVF | 13.0 | 456.805 | null | 71.827 | 98S292M253S5N | null | 395S1N37M211S | 2.31e-130 | null | 1.498e-16 | 100.0 | null | 100.0 | 99 | 390 | 1 | 292 | null | null | null | null | 396 | 432 | 2 | 38 | 99 | 173 | 174 | 200 | 201 | 251 | 252 | 260 | 261 | 368 | 402.0 | 431.0 | 369.0 | 401.0 | TCCCC | 5 | null | null | GTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGCCTGGAAGGCAGATGGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCAAACCCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'A', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'A', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'G', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'S', '19 ': 'I', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'G', '26 ': 'T'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'D', '30 ': 'V', '31 ': 'G', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'M', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'E', '57 ': 'V', '65 ': 'S'}, 'fwl3': {'66 ': 'N', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'S', '74 ': 'N', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'N', '86 ': 'T', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'S', '106 ': 'S', '107 ': 'Y', '108 ': 'T', '109 ': 'S', '110 ': 'S', '113 ': 'S', '114 ': 'I', '115 ': 'P', '116 ': 'Y', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'T', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGTCCAGCTATGCT-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGAGCCAAACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | null | IGHJ4*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGAGCCAAACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGANNNNNACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKEPNYWGQGTLVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXXYWGQGTLVTVSS | 1 | 296 | null | null | 302 | 340 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | null | null | null | null | ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YWGQGTLVTVSS | ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YWGQGTLVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAAAGAGCCAAACTAC | AKEPNY | TGTGCGAAAGAGCCAAACTACTGG | 24.0 | CAKEPNYW | 8.0 | 463.037 | null | 75.672 | 136S296M115S | null | 437S9N39M71S | 2.607e-132 | null | 8.841e-18 | 100.0 | null | 100.0 | 137 | 432 | 1 | 296 | null | null | null | null | 438 | 476 | 10 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 443.0 | 475.0 | 425.0 | 442.0 | GCCAA | 5 | null | null | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'E', '115 ': 'P', '116 ': 'N', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGTCCAGCTATGCT-1_contig_1 | AGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAAATGTGACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATCCGATGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-5*03 | null | IGKJ2*01 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATCCGATGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTATNNNNTGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYPMYTFGQGTKLEIK | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYXXYTFGQGTKLEIK | 1 | 282 | null | null | 287 | 325 | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTAT | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSY | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGTCAGAGTATTAGTAGCTGGTTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCGTCTAGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTAT | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSY | null | null | null | null | TGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | TGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GACATCCAGATGACCCAGTCTCCTTCCACCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCCAGT | DIQMTQSPSTLSASVGDRVTITCRAS | CAGAGTATTAGTAGCTGG | QSISSW | TTGGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | AAGGCGTCT | KAS | AGTTTAGAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCTCACCATCAGCAGCCTGCAGCCTGATGATTTTGCAACTTATTACTGC | SLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAACAGTATAATAGTTATCCGATGTACACT | QQYNSYPMYT | TGCCAACAGTATAATAGTTATCCGATGTACACTTTT | 36.0 | CQQYNSYPMYTF | 12.0 | 441.224 | null | 75.672 | 93S282M179S5N | null | 379S39M136S | 9.738e-126 | null | 8.957e-18 | 100.0 | null | 100.0 | 94 | 375 | 1 | 282 | null | null | null | null | 380 | 418 | 1 | 39 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 388.0 | 417.0 | 358.0 | 387.0 | CCGA | 4 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'W'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'K', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'D', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'S', '113 ': 'Y', '114 ': 'P', '115 ': 'M', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGTCCAGTCCATAC-1_contig_1 | GGGGAGGGTCCTGCTCACATGGGAAATACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACACCTGTGGTTCTTCCTCCTGCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATTATGACGAGGTGGTGACTTGGGGACCGGCGGGGGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-31*03 | IGHD2-21*02 | IGHJ3*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATTATGACGAGGTGGTGACTTGGGGACCGGCGGGGGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGANNNNNNNNNGGTGGTGACTNNNNNNNNNNNNNNNGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARDYDEVVTWGPAGAFDIWGQGTMVTVSS | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXXXVVTXXXXXAFDIWGQGTMVTVSS | 1 | 299 | 309.0 | 318.0 | 334 | 379 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | GGTGGTGACT | VVT | GGTGGTGACT | VVT | GCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | GCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSQTLSLTCTVS | GGTGGCTCCATCAGCAGTGGTGGTTACTAC | GGSISSGGYY | TGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTAC | WSWIRQHPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGAGAGATTATGACGAGGTGGTGACTTGGGGACCGGCGGGGGCTTTTGATATC | ARDYDEVVTWGPAGAFDI | TGTGCGAGAGATTATGACGAGGTGGTGACTTGGGGACCGGCGGGGGCTTTTGATATCTGG | 60.0 | CARDYDEVVTWGPAGAFDIW | 20.0 | 467.712 | 19.914 | 89.131 | 119S299M151S | 427S10N10M132S8N | 452S4N46M71S | 1.064e-133 | 0.258 | 8.174999999999999e-22 | 100.0 | 100.0 | 100.0 | 120 | 418 | 1 | 299 | 428.0 | 437.0 | 11.0 | 20.0 | 453 | 498 | 5 | 50 | 120 | 194 | 195 | 224 | 225 | 275 | 276 | 296 | 297 | 410 | 465.0 | 497.0 | 411.0 | 464.0 | TTATGACGA | 9 | TGGGGACCGGCGGGG | 15.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'G', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'Y', '109 ': 'D', '110 ': 'E', '111 ': 'V', '111A': 'V', '111B': 'T', '112C': 'W', '112B': 'G', '112A': 'P', '112 ': 'A', '113 ': 'G', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGTCCAGTCCATAC-1_contig_2 | AGCTTCAGCTGTGGGTAGAGAAGACAGGACTCAGGACAATCTCCAGCATGGCCAGCTTCCCTCTCCTCCTCACCCTCCTCACTCACTGTGCAGGGTCCTGGGCCCAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGCCTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-44*01 | null | IGLJ2*01 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGCCTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGNNTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGLVFGGGTKLTVL | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGXVFGGGTKLTVL | 1 | 293 | null | null | 296 | 331 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGG | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGG | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNG | null | null | null | null | TGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | TGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGC | QSVLTQPPSASGTPGQRVTISCSGS | AGCTCCAACATCGGAAGTAATACT | SSNIGSNT | GTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTAT | VNWYQQLPGTAPKLLIY | AGTAATAAT | SNN | CAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGT | QRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | GCAGCATGGGATGACAGCCTGAATGGCCTGGTA | AAWDDSLNGLV | TGTGCAGCATGGGATGACAGCCTGAATGGCCTGGTATTC | 39.0 | CAAWDDSLNGLVF | 13.0 | 458.363 | null | 69.904 | 104S293M249S3N | null | 399S2N36M211S | 7.883000000000005e-131 | null | 5.708e-16 | 100.0 | null | 100.0 | 105 | 397 | 1 | 293 | null | null | null | null | 400 | 435 | 3 | 38 | 105 | 179 | 180 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 405.0 | 434.0 | 372.0 | 404.0 | CC | 2 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'A', '12 ': 'S', '13 ': 'G', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'S', '37 ': 'N', '38 ': 'T'}, 'fwl2': {'39 ': 'V', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'S', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'Q', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'A', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'A', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'D', '110 ': 'S', '113 ': 'L', '114 ': 'N', '115 ': 'G', '116 ': 'L', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGTCCCAGAAGCAC-1_contig_1 | ACAACCACACCCCTCCTAAGAAGAAGCCCCTAGACCACAGCTCCACACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCAACAGGTGCCCACTCCCAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCAACACTGGGAACCCAACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGTGCGAGAGAGTGGGACGCTTCGGGAGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV7-4-1*02 | IGHD1-26*01 | IGHJ4*02 | CAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCAACACTGGGAACCCAACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGTGCGAGAGAGTGGGACGCTTCGGGAGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCAACACTGGGAACCCAACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGTGCGAGAGAGTGGGANNNNNNNNNNNNNTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGSELKKPGASVKVSCKASGYTFTSYAMNWVRQAPGQGLEWMGWINTNTGNPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCAREWDASGEYWGQGTLVTVSS | QVQLVQSGSELKKPGASVKVSCKASGYTFTSYAMNWVRQAPGQGLEWMGWINTNTGNPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCAREWXXXXXYWGQGTLVTVSS | 1 | 296 | 297.0 | 302.0 | 316 | 352 | CAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCAACACTGGGAACCCAACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGSELKKPGASVKVSCKASGYTFTSYAMNWVRQAPGQGLEWMGWINTNTGNPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCAR | CAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTAGCTATGCTATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCAACACTGGGAACCCAACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGSELKKPGASVKVSCKASGYTFTSYAMNWVRQAPGQGLEWMGWINTNTGNPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCAR | GTGGGA | W | GTGGGA | W | TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YWGQGTLVTVSS | TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YWGQGTLVTVSS | CAGGTGCAGCTGGTGCAATCTGGGTCTGAGTTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCT | QVQLVQSGSELKKPGASVKVSCKAS | GGATACACCTTCACTAGCTATGCT | GYTFTSYA | ATGAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGG | MNWVRQAPGQGLEWMGW | ATCAACACCAACACTGGGAACCCA | INTNTGNP | ACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCAGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGT | TYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGAGTGGGACGCTTCGGGAGAGTAC | AREWDASGEY | TGTGCGAGAGAGTGGGACGCTTCGGGAGAGTACTGG | 36.0 | CAREWDASGEYW | 12.0 | 463.037 | 12.223 | 71.827 | 106S296M127S | 402S6N6M121S8N | 421S11N37M71S | 2.517e-132 | 49.49 | 1.228e-16 | 100.0 | 100.0 | 100.0 | 107 | 402 | 1 | 296 | 403.0 | 408.0 | 7.0 | 12.0 | 422 | 458 | 12 | 48 | 107 | 181 | 182 | 205 | 206 | 256 | 257 | 280 | 281 | 394 | 425.0 | 457.0 | 395.0 | 424.0 | null | 0 | CGCTTCGGGAGAG | 13.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'S', '11 ': 'E', '12 ': 'L', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'T', '59 ': 'N', '62 ': 'T', '63 ': 'G', '64 ': 'N', '65 ': 'P'}, 'fwh3': {'66 ': 'T', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'G', '71 ': 'F', '72 ': 'T', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'V', '78 ': 'F', '79 ': 'S', '80 ': 'L', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'V', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'E', '108 ': 'W', '109 ': 'D', '113 ': 'A', '114 ': 'S', '115 ': 'G', '116 ': 'E', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGTCCCAGAAGCAC-1_contig_2 | GCTCATGAAATTTGCTTTTGTACTCACTGGTTGTTTTTGCATAGGCCCCTCCAGGCCACGACCAGCTGTTTGGATTTTATAAACGGGCCGTTTGCATTGTGAACTGAGCTACAACAGGCAGGCAGGGGCAGCAAGATGGTGTTGCAGACCCAGGTCTTCATTTCTCTGTTGCTCTGGATCTCTGGTGCCTACGGGGACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCCCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV4-1*01 | null | IGKJ4*01 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCCCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCCCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPPTFGGGTKVEIK | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPPTFGGGTKVEIK | 1 | 305 | null | null | 306 | 340 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPP | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTCC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPP | null | null | null | null | CACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | CACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGC | DIVMTQSPDSLAVSLGERATINCKSS | CAGAGTGTTTTATACAGCTCCAACAATAAGAACTAC | QSVLYSSNNKNY | TTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTAC | LAWYQQKPGQPPKLLIY | TGGGCATCT | WAS | ACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGT | TRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAGCAATATTATAGTACTCCTCCCACT | QQYYSTPPT | TGTCAGCAATATTATAGTACTCCTCCCACTTTC | 33.0 | CQQYYSTPPTF | 11.0 | 477.06 | null | 67.981 | 195S305M171S | null | 500S3N35M136S | 1.93e-136 | null | 2.249e-15 | 100.0 | null | 100.0 | 196 | 500 | 1 | 305 | null | null | null | null | 501 | 535 | 4 | 38 | 196 | 273 | 274 | 309 | 310 | 360 | 361 | 369 | 370 | 477 | 505.0 | 534.0 | 478.0 | 504.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'D', '10 ': 'S', '11 ': 'L', '12 ': 'A', '13 ': 'V', '14 ': 'S', '15 ': 'L', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'I', '22 ': 'N', '23 ': 'C', '24 ': 'K', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'L', '31 ': 'Y', '32 ': 'S', '33 ': 'S', '34 ': 'N', '35 ': 'N', '36 ': 'K', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'P', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'W', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'P', '116 ': 'P', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGTCCCAGCTCCGA-1_contig_2 | AGGTCTCAGAGAGGAGCCTTAGCCCTGGACTCCAAGGCCTTTCCACTTGGTGATCAGCACTGAGCACAGAGGACTCACCATGGAATTGGGGCTGAGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATCGACCATCTTTCATTCGGGGAGTTATTAGGTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGCACCCACCAAGGCTCCGGATGTGTTCCCCATCATATCAGGGTGCAGACACCCAAAGGATAACAGCCCTGTGGTCCTGGCATGCTTGATAACTGGGTACCACC | H | F | T | F | T | F | T | IGHV3-7*01 | IGHD3-10*01 | IGHJ6*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATCGACCATCTTTCATTCGGGGAGTTATTAGGTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGANNNNNNNNNNNNNNTTCGGGGAGTTATTANNTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDRPSFIRGVIRYYYYGMDVWGQGTTVTVSS | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARXXXXXXRGVIXYYYYGMDVWGQGTTVTVSS | 1 | 296 | 311.0 | 325.0 | 328 | 384 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGA | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | TTCGGGGAGTTATTA | RGVI | TTCGGGGAGTTATTA | RGVI | TACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | TACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGTAGCTATTGG | GFTFSSYW | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAAC | MSWVRQAPGKGLEWVAN | ATAAAGCAAGATGGAAGTGAGAAA | IKQDGSEK | TACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGATCGACCATCTTTCATTCGGGGAGTTATTAGGTACTACTACTACGGTATGGACGTC | ARDRPSFIRGVIRYYYYGMDV | TGTGCGAGAGATCGACCATCTTTCATTCGGGGAGTTATTAGGTACTACTACTACGGTATGGACGTCTGG | 69.0 | CARDRPSFIRGVIRYYYYGMDVW | 23.0 | 463.037 | 29.528 | 110.281 | 136S296M191S | 446S12N15M162S4N | 463S5N57M103S | 2.972e-132 | 0.0003612 | 3.854e-28 | 100.0 | 100.0 | 100.0 | 137 | 432 | 1 | 296 | 447.0 | 461.0 | 13.0 | 27.0 | 464 | 520 | 6 | 62 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 488.0 | 520.0 | 425.0 | 487.0 | TCGACCATCTTTCA | 14 | GG | 2.0 | GCACCCACCAAGGCTCCGGATGTGTTCCCCATCATATCAGGGTGCAGACACCCAAAGGATAACAGCCCTGTGGTCCTGGCATGCTTGATAACTGGGTACCACC | IGHD | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'W'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'N'}, 'cdrh2': {'56 ': 'I', '57 ': 'K', '58 ': 'Q', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'E', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'V', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'R', '109 ': 'P', '110 ': 'S', '111 ': 'F', '111A': 'I', '111B': 'R', '111C': 'G', '111D': 'V', '112D': 'I', '112C': 'R', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGTCCCAGCTCCGA-1_contig_1 | AGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTTCCAGATGCGACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-12*01 | null | IGKJ4*01 | GACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFPLTFGGGTKVEIK | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFPLTFGGGTKVEIK | 1 | 286 | null | null | 287 | 322 | GACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCTC | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFP | GACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCTC | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFP | null | null | null | null | TCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | TCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | GACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGT | DIQMTQSPSSVSASVGDRVTITCRAS | CAGGGTATTAGCAGCTGG | QGISSW | TTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAACAGGCTAACAGTTTCCCTCTCACT | QQANSFPLT | TGTCAACAGGCTAACAGTTTCCCTCTCACTTTC | 33.0 | CQQANSFPLTF | 11.0 | 447.456 | null | 69.904 | 93S286M172S1N | null | 379S2N36M136S | 1.288e-127 | null | 4.854e-16 | 100.0 | null | 100.0 | 94 | 379 | 1 | 286 | null | null | null | null | 380 | 415 | 3 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 385.0 | 414.0 | 358.0 | 384.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'W'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'A', '108 ': 'N', '109 ': 'S', '114 ': 'F', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGTCCCAGTAGAGC-1_contig_1 | AGCTCTGGGAGAGGAGCCCCAGCCGTGAGATTCCCAGGAGTTTCCACTTGGTGATCAGCACTGAACACAGACCACCAACCATGGAGTTTGGGCTTAGCTGGGTTTTCCTTGTTGCTATTTTAAAAGGTGTCCAATGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAGATCCCGCCTCATTACGATTTTTGGAGTGGTTATCGGGGGTTGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-49*04 | IGHD3-3*01 | IGHJ6*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAGATCCCGCCTCATTACGATTTTTGGAGTGGTTATCGGGGGTTGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAGANNNNNNNNNATTACGATTTTTGGAGTGGTTATNNNNNNNNNACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLVESGGGLVQPGRSLRLSCTASGFTFGDYAMSWVRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTRDPASLRFLEWLSGVDGMDVWGQGTTVTVSS | EVQLVESGGGLVQPGRSLRLSCTASGFTFGDYAMSWVRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTRXXXXLRFLEWLXXXXGMDVWGQGTTVTVSS | 1 | 302 | 312.0 | 334.0 | 344 | 390 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAGA | EVQLVESGGGLVQPGRSLRLSCTASGFTFGDYAMSWVRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAGA | EVQLVESGGGLVQPGRSLRLSCTASGFTFGDYAMSWVRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTR | ATTACGATTTTTGGAGTGGTTAT | LRFLEWL | ATTACGATTTTTGGAGTGGTTAT | LRFLEWL | ACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GMDVWGQGTTVTVSS | ACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GMDVWGQGTTVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCAGGGCGGTCCCTGAGACTCTCCTGTACAGCTTCT | EVQLVESGGGLVQPGRSLRLSCTAS | GGATTCACCTTTGGTGATTATGCT | GFTFGDYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTC | MSWVRQAPGKGLEWVGF | ATTAGAAGCAAAGCTTATGGTGGGACAACA | IRSKAYGGTT | GAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGT | EYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | ACTAGAGATCCCGCCTCATTACGATTTTTGGAGTGGTTATCGGGGGTTGACGGTATGGACGTC | TRDPASLRFLEWLSGVDGMDV | TGTACTAGAGATCCCGCCTCATTACGATTTTTGGAGTGGTTATCGGGGGTTGACGGTATGGACGTCTGG | 69.0 | CTRDPASLRFLEWLSGVDGMDVW | 23.0 | 472.386 | 44.909 | 91.054 | 137S302M160S | 448S2N23M128S6N | 480S15N47M72S | 4.375e-135 | 8.13e-09 | 2.272e-22 | 100.0 | 100.0 | 100.0 | 138 | 439 | 1 | 302 | 449.0 | 471.0 | 3.0 | 25.0 | 481 | 527 | 16 | 62 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 317 | 318 | 431 | 495.0 | 527.0 | 432.0 | 494.0 | TCCCGCCTC | 9 | CGGGGGTTG | 9.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'T', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'G', '36 ': 'D', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'G', '55 ': 'F'}, 'cdrh2': {'56 ': 'I', '57 ': 'R', '58 ': 'S', '59 ': 'K', '60 ': 'A', '61 ': 'Y', '62 ': 'G', '63 ': 'G', '64 ': 'T', '65 ': 'T'}, 'fwh3': {'66 ': 'E', '67 ': 'Y', '68 ': 'A', '69 ': 'A', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'D', '83 ': 'S', '84 ': 'K', '85 ': 'S', '86 ': 'I', '87 ': 'A', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'T', '106 ': 'R', '107 ': 'D', '108 ': 'P', '109 ': 'A', '110 ': 'S', '111 ': 'L', '111A': 'R', '111B': 'F', '111C': 'L', '111D': 'E', '112D': 'W', '112C': 'L', '112B': 'S', '112A': 'G', '112 ': 'V', '113 ': 'D', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGTCCCAGTAGAGC-1_contig_2 | AGCTTCAGCTGTGGGTAGAGAAGACAGGACTCAGGACAATCTCCAGCATGGCCAGCTTCCCTCTCCTCCTCACCCTCCTCACTCACTGTGCAGGGTCCTGGGCCCAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTCCGCATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-44*01 | null | IGLJ2*01 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTCCGCATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTCCNNNTGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGPHVVFGGGTKLTVL | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGPXVVFGGGTKLTVL | 1 | 296 | null | null | 300 | 337 | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTCC | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGP | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGCAGCTCCAACATCGGAAGTAATACTGTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATAGTAATAATCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGTGCAGCATGGGATGACAGCCTGAATGGTCC | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGP | null | null | null | null | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | CAGTCTGTGCTGACTCAGCCACCCTCAGCGTCTGGGACCCCCGGGCAGAGGGTCACCATCTCTTGTTCTGGAAGC | QSVLTQPPSASGTPGQRVTISCSGS | AGCTCCAACATCGGAAGTAATACT | SSNIGSNT | GTAAACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTAT | VNWYQQLPGTAPKLLIY | AGTAATAAT | SNN | CAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAGTCTGGCACCTCAGCCTCCCTGGCCATCAGTGGGCTCCAGTCTGAGGATGAGGCTGATTATTACTGT | QRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | GCAGCATGGGATGACAGCCTGAATGGTCCGCATGTGGTA | AAWDDSLNGPHVV | TGTGCAGCATGGGATGACAGCCTGAATGGTCCGCATGTGGTATTC | 45.0 | CAAWDDSLNGPHVVF | 15.0 | 463.037 | null | 73.749 | 104S296M252S | null | 403S38M211S | 3.117e-132 | null | 4.009e-17 | 100.0 | null | 100.0 | 105 | 400 | 1 | 296 | null | null | null | null | 404 | 441 | 1 | 38 | 105 | 179 | 180 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 411.0 | 440.0 | 372.0 | 410.0 | GCA | 3 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'A', '12 ': 'S', '13 ': 'G', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'S', '37 ': 'N', '38 ': 'T'}, 'fwl2': {'39 ': 'V', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'S', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'Q', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'S', '89 ': 'L', '90 ': 'A', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'A', '106 ': 'A', '107 ': 'W', '108 ': 'D', '109 ': 'D', '110 ': 'S', '111 ': 'L', '112 ': 'N', '113 ': 'G', '114 ': 'P', '115 ': 'H', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGTCCGTAATAGCA-1_contig_1 | TGGGGAGGGTCCTGCTCACATGGGAAATACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACACCTGTGGTTCTTCCTCCTGCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGTGACCCGTCGTACTATGATAGTAGTGGTTATACTGTTCCAATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-30-4*01 | IGHD3-22*01 | IGHJ3*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGTGACCCGTCGTACTATGATAGTAGTGGTTATACTGTTCCAATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGANNNNNNNTACTATGATAGTAGTGGTTATNNNNNNNNNATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCASDPSYYDSSGYTVPIWGQGTMVTVSS | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARXXXYYDSSGYXXXIWGQGTMVTVSS | 1 | 299 | 307.0 | 327.0 | 337 | 373 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGTGA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGA | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAR | TACTATGATAGTAGTGGTTAT | YYDSSGY | TACTATGATAGTAGTGGTTAT | YYDSSGY | ATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | IWGQGTMVTVSS | ATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | IWGQGTMVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSQTLSLTCTVS | GGTGGCTCCATCAGCAGTGGTGATTACTAC | GGSISSGDYY | TGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTAC | WSWIRQPPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCCAGTGACCCGTCGTACTATGATAGTAGTGGTTATACTGTTCCAATC | ASDPSYYDSSGYTVPI | TGTGCCAGTGACCCGTCGTACTATGATAGTAGTGGTTATACTGTTCCAATCTGG | 54.0 | CASDPSYYDSSGYTVPIW | 18.0 | 464.595 | 41.064 | 71.827 | 120S299M145S | 426S4N21M117S6N | 456S13N37M71S | 9.143e-133 | 1.099e-07 | 1.311e-16 | 99.666 | 100.0 | 100.0 | 121 | 419 | 1 | 299 | 427.0 | 447.0 | 5.0 | 25.0 | 457 | 493 | 14 | 50 | 121 | 195 | 196 | 225 | 226 | 276 | 277 | 297 | 298 | 411 | 460.0 | 492.0 | 412.0 | 459.0 | CCCGTCG | 7 | ACTGTTCCA | 9.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'G', '36 ': 'D', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'S', '107 ': 'D', '108 ': 'P', '109 ': 'S', '110 ': 'Y', '111 ': 'Y', '111A': 'D', '112B': 'S', '112A': 'S', '112 ': 'G', '113 ': 'Y', '114 ': 'T', '115 ': 'V', '116 ': 'P', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGTCCGTAATAGCA-1_contig_2 | GGGGAGAAGTCTCTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCTGCTCAGCTCCTGGGACTCCTGCTGCTCTGGCTCCCAGATACCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCCTCCGACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-27*01 | null | IGKJ4*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCCTCCGACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCCTCCNACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQGISNYLAWYQQKPGKVPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQKYNSAPPTFGGGTKVEIK | DIQMTQSPSSLSASVGDRVTITCRASQGISNYLAWYQQKPGKVPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQKYNSAPPTFGGGTKVEIK | 1 | 287 | null | null | 289 | 322 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCCTCC | DIQMTQSPSSLSASVGDRVTITCRASQGISNYLAWYQQKPGKVPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQKYNSAPP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGTCAGGGCATTAGCAATTATTTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGTCAAAAGTATAACAGTGCCCCTCC | DIQMTQSPSSLSASVGDRVTITCRASQGISNYLAWYQQKPGKVPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQKYNSAPP | null | null | null | null | ACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | ACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCGAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGGGCATTAGCAATTAT | QGISNY | TTAGCCTGGTATCAGCAGAAACCAGGGAAAGTTCCTAAGCTCCTGATCTAT | LAWYQQKPGKVPKLLIY | GCTGCATCC | AAS | ACTTTGCAATCAGGGGTCCCATCTCGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATGTTGCAACTTATTACTGT | TLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAAAAGTATAACAGTGCCCCTCCGACT | QKYNSAPPT | TGTCAAAAGTATAACAGTGCCCCTCCGACTTTC | 33.0 | CQKYNSAPPTF | 11.0 | 449.014 | null | 66.059 | 97S287M171S | null | 385S4N34M136S | 4.4070000000000005e-128 | null | 7.029e-15 | 100.0 | null | 100.0 | 98 | 384 | 1 | 287 | null | null | null | null | 386 | 419 | 5 | 38 | 98 | 175 | 176 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 389.0 | 418.0 | 362.0 | 388.0 | G | 1 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'V', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'K', '107 ': 'Y', '108 ': 'N', '109 ': 'S', '114 ': 'A', '115 ': 'P', '116 ': 'P', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGTCCGTAGCGATG-1_contig_2 | TCGTTGTCTTATCTGGGGAGCTCTGGGAGAGGAGCCCCAGCCCTGAGATTCCCAGGTGTTTCCATTCAGTGATCAGCACTGAACACAGAGGACTCACCATGGAGTTGGGACTGAGCTGGATTTTCCTTTTGGCTATTTTAAAAGGTGTCCAGTGTGAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGGGTTTAGAGCAGTGGCATTATACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-9*01 | IGHD6-19*01 | IGHJ6*02 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGGGTTTAGAGCAGTGGCATTATACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGNNNNNNNAGCAGTGGCNNNNTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKGFRAVALYGMDVWGQGTTVTVSS | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKXXXAVAXYGMDVWGQGTTVTVSS | 1 | 295 | 303.0 | 311.0 | 316 | 363 | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAG | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAK | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAG | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAK | AGCAGTGGC | AVA | AGCAGTGGC | AVA | TACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YGMDVWGQGTTVTVSS | TACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YGMDVWGQGTTVTVSS | GAAGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGCAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVQPGRSLRLSCAAS | GGATTCACCTTTGATGATTATGCC | GFTFDDYA | ATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGT | MHWVRQAPGKGLEWVSG | ATTAGTTGGAATAGTGGTAGCATA | ISWNSGSI | GGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGT | GYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCAAAAGGGTTTAGAGCAGTGGCATTATACGGTATGGACGTC | AKGFRAVALYGMDV | TGTGCAAAAGGGTTTAGAGCAGTGGCATTATACGGTATGGACGTCTGG | 48.0 | CAKGFRAVALYGMDVW | 16.0 | 461.479 | 17.992 | 92.976 | 155S295M140S3N | 457S6N9M124S6N | 470S14N48M72S | 8.266e-132 | 1.015 | 5.900999999999999e-23 | 100.0 | 100.0 | 100.0 | 156 | 450 | 1 | 295 | 458.0 | 466.0 | 7.0 | 15.0 | 471 | 518 | 15 | 62 | 156 | 230 | 231 | 254 | 255 | 305 | 306 | 329 | 330 | 443 | 486.0 | 518.0 | 444.0 | 485.0 | GGTTTAG | 7 | ATTA | 4.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'D', '36 ': 'D', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'G'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'W', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'I'}, 'fwh3': {'66 ': 'G', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'L', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'G', '108 ': 'F', '109 ': 'R', '110 ': 'A', '111 ': 'V', '112A': 'A', '112 ': 'L', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGTCCGTAGCGATG-1_contig_1 | AGAGCTCTGGAGAAGAGCTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-20*01 | null | IGKJ5*01 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCGATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPITFGQGTRLEIK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPITFGQGTRLEIK | 1 | 287 | null | null | 288 | 325 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | null | null | null | null | GATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | GATCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | ITFGQGTRLEIK | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPGTLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCAGCTAC | QSVSSSY | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTCGGCCAAGGGACACGACTGGAGATTAAA | FGQGTRLEIK | CAGCAGTATGGTAGCTCACCGATCACC | QQYGSSPIT | TGTCAGCAGTATGGTAGCTCACCGATCACCTTC | 33.0 | CQQYGSSPITF | 11.0 | 449.014 | null | 73.749 | 104S287M174S3N | null | 391S38M136S | 4.49e-128 | null | 3.465e-17 | 100.0 | null | 100.0 | 105 | 391 | 1 | 287 | null | null | null | null | 392 | 429 | 1 | 38 | 105 | 182 | 183 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 399.0 | 428.0 | 372.0 | 398.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'G', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'G', '109 ': 'S', '114 ': 'S', '115 ': 'P', '116 ': 'I', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'R', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGTCCGTGGCTCCA-1_contig_2 | AGCTCTGGGAGAGGAGCCCCAGCCTTGGGATTCCCAAGTGTTTTCATTCAGTGATCAGGACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGATTTTCCTTGCTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGCGATTTTTGGAGTGGTTATTATTCGGGATCATTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-15*01 | IGHD3-3*01 | IGHJ6*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGCGATTTTTGGAGTGGTTATTATTCGGGATCATTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGCGATTTTTGGAGTGGTTATTATNNNNNNNNNNTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTAIFGVVIIRDHYYYGMDVWGQGTTVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTAIFGVVIXXXXYYYGMDVWGQGTTVTVSS | 1 | 301 | 302.0 | 323.0 | 334 | 387 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | CGATTTTTGGAGTGGTTATTAT | IFGVVI | CGATTTTTGGAGTGGTTATTAT | IFGVVI | TACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | TACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYGMDVWGQGTTVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACTTTCAGTAACGCCTGG | GFTFSNAW | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGT | MSWVRQAPGKGLEWVGR | ATTAAAAGCAAAACTGATGGTGGGACAACA | IKSKTDGGTT | GACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGT | DYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | ACCACAGCGATTTTTGGAGTGGTTATTATTCGGGATCATTACTACTACGGTATGGACGTC | TTAIFGVVIIRDHYYYGMDV | TGTACCACAGCGATTTTTGGAGTGGTTATTATTCGGGATCATTACTACTACGGTATGGACGTCTGG | 66.0 | CTTAIFGVVIIRDHYYYGMDVW | 22.0 | 470.828 | 42.986 | 104.513 | 137S301M158S1N | 438S6N22M136S3N | 470S8N54M72S | 1.281e-134 | 3.066e-08 | 2.0080000000000003e-26 | 100.0 | 100.0 | 100.0 | 138 | 438 | 1 | 301 | 439.0 | 460.0 | 7.0 | 28.0 | 471 | 524 | 9 | 62 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 317 | 318 | 431 | 492.0 | 524.0 | 432.0 | 491.0 | null | 0 | TCGGGATCAT | 10.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'N', '37 ': 'A', '38 ': 'W'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'K', '58 ': 'S', '59 ': 'K', '60 ': 'T', '61 ': 'D', '62 ': 'G', '63 ': 'G', '64 ': 'T', '65 ': 'T'}, 'fwh3': {'66 ': 'D', '67 ': 'Y', '68 ': 'A', '69 ': 'A', '70 ': 'P', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'D', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'T', '106 ': 'T', '107 ': 'A', '108 ': 'I', '109 ': 'F', '110 ': 'G', '111 ': 'V', '111A': 'V', '111B': 'I', '111C': 'I', '112D': 'R', '112C': 'D', '112B': 'H', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGTCCGTGGCTCCA-1_contig_1 | GCTGTGCTGTGGGTCCAGGAGGCAGAACTCTGGGTGTCTCACCATGGCCTGGATCCCTCTACTTCTCCCCCTCCTCACTCTCTGCACAGGCTCTGAGGCCTCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV3-25*03 | null | IGLJ2*01 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTATGTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTYVVFGGGTKLTVL | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTYVVFGGGTKLTVL | 1 | 288 | null | null | 289 | 325 | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTAT | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTY | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGATGCATTGCCAAAGCAATATGCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATATAAAGACAGTGAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGTCAATCAGCAGACAGCAGTGGTACTTAT | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTY | null | null | null | null | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | GTGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VVFGGGTKLTVL | TCCTATGAGCTGACACAGCCACCCTCGGTGTCAGTGTCCCCAGGACAGACGGCCAGGATCACCTGCTCTGGAGAT | SYELTQPPSVSVSPGQTARITCSGD | GCATTGCCAAAGCAATAT | ALPKQY | GCTTATTGGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATATAT | AYWYQQKPGQAPVLVIY | AAAGACAGT | KDS | GAGAGGCCCTCAGGGATCCCTGAGCGATTCTCTGGCTCCAGCTCAGGGACAACAGTCACGTTGACCATCAGTGGAGTCCAGGCAGAAGACGAGGCTGACTATTACTGT | ERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | CAATCAGCAGACAGCAGTGGTACTTATGTGGTA | QSADSSGTYVV | TGTCAATCAGCAGACAGCAGTGGTACTTATGTGGTATTC | 39.0 | CQSADSSGTYVVF | 13.0 | 450.572 | null | 71.827 | 100S288M248S2N | null | 388S1N37M211S | 1.7170000000000002e-128 | null | 1.482e-16 | 100.0 | null | 100.0 | 101 | 388 | 1 | 288 | null | null | null | null | 389 | 425 | 2 | 38 | 101 | 175 | 176 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 395.0 | 424.0 | 362.0 | 394.0 | null | 0 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'S', '2 ': 'Y', '3 ': 'E', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'T', '19 ': 'A', '20 ': 'R', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'D'}, 'cdrl1': {'27 ': 'A', '28 ': 'L', '29 ': 'P', '36 ': 'K', '37 ': 'Q', '38 ': 'Y'}, 'fwl2': {'39 ': 'A', '40 ': 'Y', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'V', '52 ': 'L', '53 ': 'V', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'K', '57 ': 'D', '65 ': 'S'}, 'fwl3': {'66 ': 'E', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'E', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'S', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'T', '87 ': 'V', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'G', '94 ': 'V', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'Q', '106 ': 'S', '107 ': 'A', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'G', '114 ': 'T', '115 ': 'Y', '116 ': 'V', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGTCCGTGTCGCTG-1_contig_2 | GGGAGCATCACCCAGCAACCACATCTGTCCTCTAGAGAATCCCCTGAGAGCTCCGTTCCTCACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCCACAGGAGCCCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGCACCTCCGGAGGGAATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-2*02 | null | IGHJ4*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGCACCTCCGGAGGGAATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGNNNNNNNNNNNNNNNNTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCASTSGGNFDYWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAXXXXXXFDYWGQGTLVTVSS | 1 | 293 | null | null | 310 | 352 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCA | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCA | null | null | null | null | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCGGCTACTAT | GYTFTGYY | ATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGG | MHWVRQAPGQGLEWMGW | ATCAACCCTAACAGTGGTGGCACA | INPNSGGT | AACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGCACCTCCGGAGGGAATTTTGACTAC | ASTSGGNFDY | TGTGCGAGCACCTCCGGAGGGAATTTTGACTACTGG | 36.0 | CASTSGGNFDYW | 12.0 | 458.363 | null | 83.363 | 121S293M130S3N | null | 430S5N43M71S | 6.618e-131 | null | 4.2550000000000004e-20 | 100.0 | null | 100.0 | 122 | 414 | 1 | 293 | null | null | null | null | 431 | 473 | 6 | 48 | 122 | 196 | 197 | 220 | 221 | 271 | 272 | 295 | 296 | 409 | 440.0 | 472.0 | 410.0 | 439.0 | CACCTCCGGAGGGAAT | 16 | null | null | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'P', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'G', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'I', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'S', '107 ': 'T', '108 ': 'S', '109 ': 'G', '113 ': 'G', '114 ': 'N', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGTCCGTGTCGCTG-1_contig_1 | GGGGAGGAACTGCTCAGTTAGGACCCAGAGGGAACCATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-11*01 | null | IGKJ4*01 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWLTFGGGTKVEIK | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWLTFGGGTKVEIK | 1 | 283 | null | null | 284 | 319 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNW | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNW | null | null | null | null | TCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | TCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPATLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCTAC | QSVSSY | TTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GATGCATCC | DAS | AACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGT | NRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAGCAGCGTAGCAACTGGCTCACT | QQRSNWLT | TGTCAGCAGCGTAGCAACTGGCTCACTTTC | 30.0 | CQQRSNWLTF | 10.0 | 442.782 | null | 69.904 | 96S283M172S4N | null | 379S2N36M136S | 3.288e-126 | null | 4.854e-16 | 100.0 | null | 100.0 | 97 | 379 | 1 | 283 | null | null | null | null | 380 | 415 | 3 | 38 | 97 | 174 | 175 | 192 | 193 | 243 | 244 | 252 | 253 | 360 | 385.0 | 414.0 | 361.0 | 384.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'R', '108 ': 'S', '114 ': 'N', '115 ': 'W', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGTCCGTTAGAACA-1_contig_2 | GGGAGCATCACCCAGCAACCACATCTGTCCTCTAGAGAATCCCCTGAGAGCTCCGTTCCTCACCATGGACTGGACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCCACAGGAGCCCACTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGGTCCCGTACTAATGGTGTATGCTATCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-2*02 | IGHD2-8*01 | IGHJ5*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGGTCCCGTACTAATGGTGTATGCTATCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGNNNNNGTACTAATGGTGTATGCTATCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARGPVLMVYAIWFDPWGQGTLVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARXXVLMVYAIWFDPWGQGTLVTVSS | 1 | 295 | 301.0 | 320.0 | 321 | 367 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAG | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAR | GTACTAATGGTGTATGCTAT | VLMVYA | GTACTAATGGTGTATGCTAT | VLMVYA | CTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | CTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | WFDPWGQGTLVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGATACACCTTCACCGGCTACTAT | GYTFTGYY | ATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGG | MHWVRQAPGQGLEWMGW | ATCAACCCTAACAGTGGTGGCACA | INPNSGGT | AACTATGCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGGTCCCGTACTAATGGTGTATGCTATCTGGTTCGACCCC | ARGPVLMVYAIWFDP | TGTGCGAGAGGTCCCGTACTAATGGTGTATGCTATCTGGTTCGACCCCTGG | 51.0 | CARGPVLMVYAIWFDPW | 17.0 | 461.479 | 39.141 | 91.054 | 121S295M143S1N | 421S8N20M118S3N | 441S4N47M71S | 7.854e-132 | 4.129e-07 | 2.118e-22 | 100.0 | 100.0 | 100.0 | 122 | 416 | 1 | 295 | 422.0 | 441.0 | 9.0 | 28.0 | 442 | 488 | 5 | 51 | 122 | 196 | 197 | 220 | 221 | 271 | 272 | 295 | 296 | 409 | 455.0 | 487.0 | 410.0 | 454.0 | GTCCC | 5 | null | 0.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'N', '58 ': 'P', '59 ': 'N', '62 ': 'S', '63 ': 'G', '64 ': 'G', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'R', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'I', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'G', '108 ': 'P', '109 ': 'V', '110 ': 'L', '111 ': 'M', '111A': 'V', '112A': 'Y', '112 ': 'A', '113 ': 'I', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGTCCGTTAGAACA-1_contig_1 | ACTGGTTGTTTTTGCATAGGCCCCTCCAGGCCACGACCAGCTGTTTGGATTTTATAAACGGGCCGTTTGCATTGTGAACTGAGCTACAACAGGCAGGCAGGGGCAGCAAGATGGTGTTGCAGACCCAGGTCTTCATTTCTCTGTTGCTCTGGATCTCTGGTGCCTACGGGGACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTTTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV4-1*01 | null | IGKJ3*01 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTTTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCTTTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPFTFGPGTKVDIK | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPFTFGPGTKVDIK | 1 | 303 | null | null | 304 | 340 | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCT | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTP | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGCCAGAGTGTTTTATACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAGCAATATTATAGTACTCCT | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTP | null | null | null | null | TTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FTFGPGTKVDIK | TTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAAC | FTFGPGTKVDIK | GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGGCCACCATCAACTGCAAGTCCAGC | DIVMTQSPDSLAVSLGERATINCKSS | CAGAGTGTTTTATACAGCTCCAACAATAAGAACTAC | QSVLYSSNNKNY | TTAGCTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCTGCTCATTTAC | LAWYQQKPGQPPKLLIY | TGGGCATCT | WAS | ACCCGGGAATCCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGT | TRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYC | TTCGGCCCTGGGACCAAAGTGGATATCAAA | FGPGTKVDIK | CAGCAATATTATAGTACTCCTTTCACT | QQYYSTPFT | TGTCAGCAATATTATAGTACTCCTTTCACTTTC | 33.0 | CQQYYSTPFTF | 11.0 | 473.944 | null | 71.827 | 170S303M173S2N | null | 473S1N37M136S | 1.608e-135 | null | 1.506e-16 | 100.0 | null | 100.0 | 171 | 473 | 1 | 303 | null | null | null | null | 474 | 510 | 2 | 38 | 171 | 248 | 249 | 284 | 285 | 335 | 336 | 344 | 345 | 452 | 480.0 | 509.0 | 453.0 | 479.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'D', '10 ': 'S', '11 ': 'L', '12 ': 'A', '13 ': 'V', '14 ': 'S', '15 ': 'L', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'I', '22 ': 'N', '23 ': 'C', '24 ': 'K', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'L', '31 ': 'Y', '32 ': 'S', '33 ': 'S', '34 ': 'N', '35 ': 'N', '36 ': 'K', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'P', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'W', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'E', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'Y', '109 ': 'S', '114 ': 'T', '115 ': 'P', '116 ': 'F', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'P', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'D', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGTCCTCATAGCAC-1_contig_2 | ATCACATAACAACCACATTCCTCCTCTAAAGAAGCCCCTGGGAGCACAGCTCATCACCATGGACTGGACCTGGAGGTTCCTCTTTGTGGTGGCAGCAGCTACAGGTGTCCAGTCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGCTCGTCAGTGGTAGCTGCCCACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-69*01 | IGHD2-15*01 | IGHJ6*02 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGCTCGTCAGTGGTAGCTGCCCACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGNNNNNNNGTGGTAGCTGCNNACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCASSSVVAAHYYYYGMDVWGQGTTVTVSS | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCAXXXVVAAXYYYYGMDVWGQGTTVTVSS | 1 | 293 | 301.0 | 311.0 | 314 | 372 | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAG | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCA | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAG | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCA | GTGGTAGCTGC | VVAA | GTGGTAGCTGC | VVAA | ACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | ACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGSSVKVSCKAS | GGAGGCACCTTCAGCAGCTATGCT | GGTFSSYA | ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGG | ISWVRQAPGQGLEWMGG | ATCATCCCTATCTTTGGTACAGCA | IIPIFGTA | AACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGT | NYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGCTCGTCAGTGGTAGCTGCCCACTACTACTACTACGGTATGGACGTC | ASSSVVAAHYYYYGMDV | TGTGCGAGCTCGTCAGTGGTAGCTGCCCACTACTACTACTACGGTATGGACGTCTGG | 57.0 | CASSSVVAAHYYYYGMDVW | 19.0 | 458.363 | 21.837 | 114.126 | 115S293M151S3N | 415S14N11M133S6N | 428S3N59M72S | 6.810000000000005e-131 | 0.06683 | 2.401e-29 | 100.0 | 100.0 | 100.0 | 116 | 408 | 1 | 293 | 416.0 | 426.0 | 15.0 | 25.0 | 429 | 487 | 4 | 62 | 116 | 190 | 191 | 214 | 215 | 265 | 266 | 289 | 290 | 403 | 455.0 | 487.0 | 404.0 | 454.0 | CTCGTCA | 7 | CC | 2.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'S', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'I', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'G'}, 'cdrh2': {'56 ': 'I', '57 ': 'I', '58 ': 'P', '59 ': 'I', '62 ': 'F', '63 ': 'G', '64 ': 'T', '65 ': 'A'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'F', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'A', '81 ': 'D', '82 ': 'E', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'S', '107 ': 'S', '108 ': 'S', '109 ': 'V', '110 ': 'V', '111 ': 'A', '111A': 'A', '111B': 'H', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGTCCTCATAGCAC-1_contig_1 | AGGAGTCAGACCCTGTCAGGACACAGCATAGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAGATGTGCCATCCGGATGACCCAGTCTCCATCCTCATTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTACCCTTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-8*01 | null | IGKJ1*01 | GCCATCCGGATGACCCAGTCTCCATCCTCATTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTACCCTTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GCCATCCGGATGACCCAGTCTCCATCCTCATTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTACCCTTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | AIRMTQSPSSFSASTGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYCQQYYSYPWTFGQGTKVEIK | AIRMTQSPSSFSASTGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYCQQYYSYPWTFGQGTKVEIK | 1 | 285 | null | null | 286 | 322 | GCCATCCGGATGACCCAGTCTCCATCCTCATTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTACCCT | AIRMTQSPSSFSASTGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYCQQYYSYP | GCCATCCGGATGACCCAGTCTCCATCCTCATTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTACCCT | AIRMTQSPSSFSASTGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYCQQYYSYP | null | null | null | null | TGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | TGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GCCATCCGGATGACCCAGTCTCCATCCTCATTCTCTGCATCTACAGGAGACAGAGTCACCATCACTTGTCGGGCGAGT | AIRMTQSPSSFSASTGDRVTITCRAS | CAGGGTATTAGCAGTTAT | QGISSY | TTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | GCTGCATCC | AAS | ACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGAAGATTTTGCAACTTATTACTGT | TLQSGVPSRFSGSGSGTDFTLTISCLQSEDFATYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAACAGTATTATAGTTACCCTTGGACG | QQYYSYPWT | TGTCAACAGTATTATAGTTACCCTTGGACGTTC | 33.0 | CQQYYSYPWTF | 11.0 | 445.898 | null | 71.827 | 93S285M173S2N | null | 378S1N37M136S | 3.792e-127 | null | 1.28e-16 | 100.0 | null | 100.0 | 94 | 378 | 1 | 285 | null | null | null | null | 379 | 415 | 2 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 385.0 | 414.0 | 358.0 | 384.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'A', '2 ': 'I', '3 ': 'R', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'F', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'T', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'C', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'Y', '109 ': 'S', '114 ': 'Y', '115 ': 'P', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGTCCTCATGTCTT-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAACGGCGGTGTCCCGGCCCAATACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD2-8*01 | IGHJ6*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAACGGCGGTGTCCCGGCCCAATACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAANNNNGGTGTNNNNNNNNNNTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCANGGVPAQYYYYGMDVWGQGTTVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAXXGVXXXYYYYGMDVWGQGTTVTVSS | 1 | 293 | 298.0 | 302.0 | 313 | 369 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA | GGTGT | GV | GGTGT | GV | TACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | TACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YYYYGMDVWGQGTTVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAACGGCGGTGTCCCGGCCCAATACTACTACTACGGTATGGACGTC | ANGGVPAQYYYYGMDV | TGTGCGAACGGCGGTGTCCCGGCCCAATACTACTACTACGGTATGGACGTCTGG | 54.0 | CANGGVPAQYYYYGMDVW | 18.0 | 458.363 | 10.301 | 110.281 | 136S293M148S3N | 433S16N5M139S10N | 448S5N57M72S | 7.002e-131 | 205.0 | 3.565e-28 | 100.0 | 100.0 | 100.0 | 137 | 429 | 1 | 293 | 434.0 | 438.0 | 17.0 | 21.0 | 449 | 505 | 6 | 62 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 473.0 | 505.0 | 425.0 | 472.0 | CGGC | 4 | CCCGGCCCAA | 10.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'N', '107 ': 'G', '108 ': 'G', '109 ': 'V', '110 ': 'P', '111 ': 'A', '111A': 'Q', '112B': 'Y', '112A': 'Y', '112 ': 'Y', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGTCCTCATGTCTT-1_contig_1 | GGGAGAGCCCTGGGGAGGAACTGCTCAGTTAGGACCCAGAGGGAACCATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-11*01 | null | IGKJ4*01 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPTFGGGTKVEIK | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPTFGGGTKVEIK | 1 | 284 | null | null | 285 | 319 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWP | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWP | null | null | null | null | CACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | CACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPATLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCTAC | QSVSSY | TTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GATGCATCC | DAS | AACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGT | NRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAGCAGCGTAGCAACTGGCCCACT | QQRSNWPT | TGTCAGCAGCGTAGCAACTGGCCCACTTTC | 30.0 | CQQRSNWPTF | 10.0 | 444.34 | null | 67.981 | 107S284M171S3N | null | 391S3N35M136S | 1.14e-126 | null | 1.878e-15 | 100.0 | null | 100.0 | 108 | 391 | 1 | 284 | null | null | null | null | 392 | 426 | 4 | 38 | 108 | 185 | 186 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 396.0 | 425.0 | 372.0 | 395.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'R', '108 ': 'S', '114 ': 'N', '115 ': 'W', '116 ': 'P', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGTCCTCCCAAGTA-1_contig_1 | AGCTCTGGGAGAGGAGCCCCAGCCTTGGGATTCCCAAGTGTTTTCATTCAGTGATCAGGACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGATTTTCCTTGCTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGATTTTTACTCTGGAGGTAGTAGTGGTCAAAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-15*01 | IGHD3-22*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGATTTTTACTCTGGAGGTAGTAGTGGTCAAAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGANNNNNNNNNNNNNNNTAGTAGTGGTNNNNACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTDFYSGGSSGQNFDYWGQGTLVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTXXXXXXSSGXXFDYWGQGTLVTVSS | 1 | 302 | 318.0 | 327.0 | 332 | 376 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | TAGTAGTGGT | SSG | TAGTAGTGGT | SSG | ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACTTTCAGTAACGCCTGG | GFTFSNAW | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGT | MSWVRQAPGKGLEWVGR | ATTAAAAGCAAAACTGATGGTGGGACAACA | IKSKTDGGTT | GACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGT | DYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | ACCACAGATTTTTACTCTGGAGGTAGTAGTGGTCAAAACTTTGACTAC | TTDFYSGGSSGQNFDY | TGTACCACAGATTTTTACTCTGGAGGTAGTAGTGGTCAAAACTTTGACTACTGG | 54.0 | CTTDFYSGGSSGQNFDYW | 18.0 | 472.386 | 19.914 | 87.208 | 137S302M145S | 454S12N10M120S9N | 468S3N45M71S | 4.26e-135 | 0.2649 | 3.1830000000000002e-21 | 100.0 | 100.0 | 100.0 | 138 | 439 | 1 | 302 | 455.0 | 464.0 | 13.0 | 22.0 | 469 | 513 | 4 | 48 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 317 | 318 | 431 | 480.0 | 512.0 | 432.0 | 479.0 | TTTTTACTCTGGAGG | 15 | CAAA | 4.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'N', '37 ': 'A', '38 ': 'W'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'K', '58 ': 'S', '59 ': 'K', '60 ': 'T', '61 ': 'D', '62 ': 'G', '63 ': 'G', '64 ': 'T', '65 ': 'T'}, 'fwh3': {'66 ': 'D', '67 ': 'Y', '68 ': 'A', '69 ': 'A', '70 ': 'P', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'D', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'T', '106 ': 'T', '107 ': 'D', '108 ': 'F', '109 ': 'Y', '110 ': 'S', '111 ': 'G', '111A': 'G', '112B': 'S', '112A': 'S', '112 ': 'G', '113 ': 'Q', '114 ': 'N', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGTCCTCCCAAGTA-1_contig_2 | TGGGGGAGTCAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ2*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPYTFGQGTKLEIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPYTFGQGTKLEIK | 1 | 287 | null | null | 288 | 325 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPP | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACCCCTCC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPP | null | null | null | null | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAACAGAGTTACAGTACCCCTCCGTACACT | QQSYSTPPYT | TGTCAACAGAGTTACAGTACCCCTCCGTACACTTTT | 36.0 | CQQSYSTPPYTF | 12.0 | 449.014 | null | 73.749 | 96S287M174S | null | 383S1N38M136S | 4.4230000000000005e-128 | null | 3.415e-17 | 100.0 | null | 100.0 | 97 | 383 | 1 | 287 | null | null | null | null | 384 | 421 | 2 | 39 | 97 | 174 | 175 | 192 | 193 | 243 | 244 | 252 | 253 | 360 | 391.0 | 420.0 | 361.0 | 390.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '113 ': 'T', '114 ': 'P', '115 ': 'P', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGTCCTCGTCCAGG-1_contig_2 | AGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTTTTCATTTGGTGATCAGGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGTGGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATCTGATGGCAGCAGCTGCCATGTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-23*01 | IGHD6-13*01 | IGHJ4*02 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATCTGATGGCAGCAGCTGCCATGTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGANNNNNNNGCAGCAGCTGNNNNNNACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDLMAAAAMYYFDYWGQGTLVTVSS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKXXXAAAXXXYFDYWGQGTLVTVSS | 1 | 296 | 304.0 | 313.0 | 320 | 367 | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGA | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK | GCAGCAGCTG | AAA | GCAGCAGCTG | AAA | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | YFDYWGQGTLVTVSS | GAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTACAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLLESGGGLVQPGGSLRLSCAAS | GGATTCACCTTTAGCAGCTATGCC | GFTFSSYA | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCT | MSWVRQAPGKGLEWVSA | ATTAGTGGTAGTGGTGGTAGCACA | ISGSGGST | TACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAAAGATCTGATGGCAGCAGCTGCCATGTACTACTTTGACTAC | AKDLMAAAAMYYFDY | TGTGCGAAAGATCTGATGGCAGCAGCTGCCATGTACTACTTTGACTACTGG | 51.0 | CAKDLMAAAAMYYFDYW | 17.0 | 463.037 | 19.914 | 92.976 | 136S296M142S | 439S7N10M125S4N | 455S48M71S | 2.727e-132 | 0.2603 | 5.738e-23 | 100.0 | 100.0 | 100.0 | 137 | 432 | 1 | 296 | 440.0 | 449.0 | 8.0 | 17.0 | 456 | 503 | 1 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 470.0 | 502.0 | 425.0 | 469.0 | TCTGATG | 7 | CCATGT | 6.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'L', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'A'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'G', '59 ': 'S', '62 ': 'G', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'K', '107 ': 'D', '108 ': 'L', '109 ': 'M', '110 ': 'A', '111 ': 'A', '111A': 'A', '112A': 'A', '112 ': 'M', '113 ': 'Y', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGTCCTCGTCCAGG-1_contig_1 | TGAGCGCAGAAGGCAGGACTCGGGACAATCTTCATCATGACCTGCTCCCCTCTCCTCCTCACCCTTCTCATTCACTGCACAGGGTCCTGGGCCCAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCGGAGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV1-51*01 | null | IGLJ3*02 | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCGGAGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGCNNNGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSAEVFGGGTKLTVL | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSAXVFGGGTKLTVL | 1 | 293 | null | null | 297 | 331 | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGC | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSA | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGCAGCTCCAACATTGGGAATAATTATGTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTATGACAATAATAAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGCGGAACATGGGATAGCAGCCTGAGTGC | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSA | null | null | null | null | GGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | CAGTCTGTGTTGACGCAGCCGCCCTCAGTGTCTGCGGCCCCAGGACAGAAGGTCACCATCTCCTGCTCTGGAAGC | QSVLTQPPSVSAAPGQKVTISCSGS | AGCTCCAACATTGGGAATAATTAT | SSNIGNNY | GTATCCTGGTACCAGCAGCTCCCAGGAACAGCCCCCAAACTCCTCATTTAT | VSWYQQLPGTAPKLLIY | GACAATAAT | DNN | AAGCGACCCTCAGGGATTCCTGACCGATTCTCTGGCTCCAAGTCTGGCACGTCAGCCACCCTGGGCATCACCGGACTCCAGACTGGGGACGAGGCCGATTATTACTGC | KRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | GGAACATGGGATAGCAGCCTGAGTGCGGAGGTG | GTWDSSLSAEV | TGCGGAACATGGGATAGCAGCCTGAGTGCGGAGGTGTTC | 39.0 | CGTWDSSLSAEVF | 13.0 | 458.363 | null | 67.981 | 93S293M249S3N | null | 389S3N35M211S | 7.743000000000001e-131 | null | 2.127e-15 | 100.0 | null | 100.0 | 94 | 386 | 1 | 293 | null | null | null | null | 390 | 424 | 4 | 38 | 94 | 168 | 169 | 192 | 193 | 243 | 244 | 252 | 253 | 360 | 394.0 | 423.0 | 361.0 | 393.0 | GGA | 3 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'S', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'P', '8 ': 'P', '9 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'A', '14 ': 'A', '15 ': 'P', '16 ': 'G', '17 ': 'Q', '18 ': 'K', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'S', '25 ': 'G', '26 ': 'S'}, 'cdrl1': {'27 ': 'S', '28 ': 'S', '29 ': 'N', '30 ': 'I', '35 ': 'G', '36 ': 'N', '37 ': 'N', '38 ': 'Y'}, 'fwl2': {'39 ': 'V', '40 ': 'S', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'L', '46 ': 'P', '47 ': 'G', '48 ': 'T', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'D', '57 ': 'N', '65 ': 'N'}, 'fwl3': {'66 ': 'K', '67 ': 'R', '68 ': 'P', '69 ': 'S', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'K', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'S', '87 ': 'A', '88 ': 'T', '89 ': 'L', '90 ': 'G', '91 ': 'I', '92 ': 'T', '93 ': 'G', '94 ': 'L', '95 ': 'Q', '96 ': 'T', '97 ': 'G', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'D', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'G', '106 ': 'T', '107 ': 'W', '108 ': 'D', '109 ': 'S', '110 ': 'S', '113 ': 'L', '114 ': 'S', '115 ': 'A', '116 ': 'E', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGTCCTCTCCCTGA-1_contig_1 | ACTGTCCTCTCCCTGACACTTAACCCTTTCATATATGGGGAGGGTCCTGCTCACATGGGAAATACTTTCTGAGAGTCCTGGACCTCCTGTGCAAGAACATGAAACACCTGTGGTTCTTCCTCCTGCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGTGCCGACGGTGACTACGTGGCAGGGCGAGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV4-31*03 | IGHD4-17*01 | IGHJ3*02 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGTGCCGACGGTGACTACGTGGCAGGGCGAGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGNNNNNACGGTGACTACNNNNNNNNNNNNGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCASADGDYVAGRAFDIWGQGTMVTVSS | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAXXXGDYXXXXAFDIWGQGTMVTVSS | 1 | 296 | 302.0 | 312.0 | 325 | 370 | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAG | QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGGYYWSWIRQHPGKGLEWIGYIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCA | ACGGTGACTAC | GDY | ACGGTGACTAC | GDY | GCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | GCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG | AFDIWGQGTMVTVSS | CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCACAGACCCTGTCCCTCACCTGCACTGTCTCT | QVQLQESGPGLVKPSQTLSLTCTVS | GGTGGCTCCATCAGCAGTGGTGGTTACTAC | GGSISSGGYY | TGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTAC | WSWIRQHPGKGLEWIGY | ATCTATTACAGTGGGAGCACC | IYYSGST | TACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGT | YYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYC | TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA | WGQGTMVTVSS | GCGAGTGCCGACGGTGACTACGTGGCAGGGCGAGCTTTTGATATC | ASADGDYVAGRAFDI | TGTGCGAGTGCCGACGGTGACTACGTGGCAGGGCGAGCTTTTGATATCTGG | 51.0 | CASADGDYVAGRAFDIW | 17.0 | 463.037 | 21.837 | 89.131 | 155S296M145S3N | 456S5N11M129S | 479S4N46M71S | 2.837e-132 | 0.07133 | 8.569999999999999e-22 | 100.0 | 100.0 | 100.0 | 156 | 451 | 1 | 296 | 457.0 | 467.0 | 6.0 | 16.0 | 480 | 525 | 5 | 50 | 156 | 230 | 231 | 260 | 261 | 311 | 312 | 332 | 333 | 446 | 492.0 | 524.0 | 447.0 | 491.0 | TGCCG | 5 | GTGGCAGGGCGA | 12.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'Q', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'S', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'S', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'V', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'G', '29 ': 'S', '30 ': 'I', '31 ': 'S', '34 ': 'S', '35 ': 'G', '36 ': 'G', '37 ': 'Y', '38 ': 'Y'}, 'fwh2': {'39 ': 'W', '40 ': 'S', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'H', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'I', '54 ': 'G', '55 ': 'Y'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'Y', '59 ': 'S', '63 ': 'G', '64 ': 'S', '65 ': 'T'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'N', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'V', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'F', '88 ': 'S', '89 ': 'L', '90 ': 'K', '91 ': 'L', '92 ': 'S', '93 ': 'S', '94 ': 'V', '95 ': 'T', '96 ': 'A', '97 ': 'A', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'S', '107 ': 'A', '108 ': 'D', '109 ': 'G', '110 ': 'D', '111 ': 'Y', '111A': 'V', '112A': 'A', '112 ': 'G', '113 ': 'R', '114 ': 'A', '115 ': 'F', '116 ': 'D', '117 ': 'I'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'M', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGTCCTCTCCCTGA-1_contig_2 | TGGGAGGAGTCAGTCTCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACGGTCACCTTCGGCCAAGGGACACGACTGGAGATTAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1-39*01 | null | IGKJ5*01 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACGGTCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTACNNTCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTVTFGQGTRLEIK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTXTFGQGTRLEIK | 1 | 281 | null | null | 284 | 319 | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYST | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAGCTATTTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGTCAACAGAGTTACAGTAC | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYST | null | null | null | null | TCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | TFGQGTRLEIK | TCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | TFGQGTRLEIK | GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGT | DIQMTQSPSSLSASVGDRVTITCRAS | CAGAGCATTAGCAGCTAT | QSISSY | TTAAATTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LNWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGTCTGCAACCTGAAGATTTTGCAACTTACTACTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCCAAGGGACACGACTGGAGATTAAA | FGQGTRLEIK | CAACAGAGTTACAGTACGGTCACC | QQSYSTVT | TGTCAACAGAGTTACAGTACGGTCACCTTC | 30.0 | CQQSYSTVTF | 10.0 | 439.666 | null | 69.904 | 97S281M174S6N | null | 380S2N36M136S | 2.857e-125 | null | 4.863e-16 | 100.0 | null | 100.0 | 98 | 378 | 1 | 281 | null | null | null | null | 381 | 416 | 3 | 38 | 98 | 175 | 176 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 386.0 | 415.0 | 362.0 | 385.0 | GG | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'L', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'N', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'S', '108 ': 'Y', '114 ': 'S', '115 ': 'T', '116 ': 'V', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'R', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTGTCCTCTGACCTC-1_contig_2 | AGCTCTGGGAGAGGAGCCCCAGCCTTGGGATTCCCAAGTGTTTTCATTCAGTGATCAGGACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGATTTTCCTTGCTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGATCGGGGGGTAGCTGCTACTTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-15*01 | IGHD2-15*01 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGATCGGGGGGTAGCTGCTACTTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGANNNNNNGGTAGCTGCTACTNNNTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTDRGVAATYFDYWGQGTLVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTXXXVAATXFDYWGQGTLVTVSS | 1 | 302 | 309.0 | 321.0 | 325 | 367 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | GGTAGCTGCTACT | VAAT | GGTAGCTGCTACT | VAAT | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | FDYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACTTTCAGTAACGCCTGG | GFTFSNAW | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGT | MSWVRQAPGKGLEWVGR | ATTAAAAGCAAAACTGATGGTGGGACAACA | IKSKTDGGTT | GACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGT | DYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | ACCACAGATCGGGGGGTAGCTGCTACTTATTTTGACTAC | TTDRGVAATYFDY | TGTACCACAGATCGGGGGGTAGCTGCTACTTATTTTGACTACTGG | 45.0 | CTTDRGVAATYFDYW | 15.0 | 472.386 | 25.682 | 83.363 | 137S302M136S | 445S16N13M117S2N | 461S5N43M71S | 4.191e-135 | 0.004785 | 4.5030000000000005e-20 | 100.0 | 100.0 | 100.0 | 138 | 439 | 1 | 302 | 446.0 | 458.0 | 17.0 | 29.0 | 462 | 504 | 6 | 48 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 317 | 318 | 431 | 471.0 | 503.0 | 432.0 | 470.0 | TCGGGG | 6 | TAT | 3.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'N', '37 ': 'A', '38 ': 'W'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'K', '58 ': 'S', '59 ': 'K', '60 ': 'T', '61 ': 'D', '62 ': 'G', '63 ': 'G', '64 ': 'T', '65 ': 'T'}, 'fwh3': {'66 ': 'D', '67 ': 'Y', '68 ': 'A', '69 ': 'A', '70 ': 'P', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'D', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'T', '106 ': 'T', '107 ': 'D', '108 ': 'R', '109 ': 'G', '110 ': 'V', '111 ': 'A', '112 ': 'A', '113 ': 'T', '114 ': 'Y', '115 ': 'F', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTGTCCTCTGACCTC-1_contig_1 | AGGAGTCAGACCCAGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTTCCAGATGCGACATCCAGATGACCCAGTCTCCATCTTCTGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACTATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV1D-12*01 | null | IGKJ4*01 | GACATCCAGATGACCCAGTCTCCATCTTCTGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACTATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | GACATCCAGATGACCCAGTCTCCATCTTCTGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACTATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFPLTFGGGTKVEIK | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFPLTFGGGTKVEIK | 1 | 286 | null | null | 287 | 322 | GACATCCAGATGACCCAGTCTCCATCTTCTGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACTATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCTC | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFP | GACATCCAGATGACCCAGTCTCCATCTTCTGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACTATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAACAGTTTCCCTC | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFP | null | null | null | null | TCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | TCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAAC | TFGGGTKVEIK | GACATCCAGATGACCCAGTCTCCATCTTCTGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGT | DIQMTQSPSSVSASVGDRVTITCRAS | CAGGGTATTAGCAGCTGG | QGISSW | TTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTAT | LAWYQQKPGKAPKLLIY | GCTGCATCC | AAS | AGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACTATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTACTATTGT | SLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC | TTCGGCGGAGGGACCAAGGTGGAGATCAAA | FGGGTKVEIK | CAACAGGCTAACAGTTTCCCTCTCACT | QQANSFPLT | TGTCAACAGGCTAACAGTTTCCCTCTCACTTTC | 33.0 | CQQANSFPLTF | 11.0 | 447.456 | null | 69.904 | 93S286M172S1N | null | 379S2N36M136S | 1.288e-127 | null | 4.854e-16 | 100.0 | null | 100.0 | 94 | 379 | 1 | 286 | null | null | null | null | 380 | 415 | 3 | 38 | 94 | 171 | 172 | 189 | 190 | 240 | 241 | 249 | 250 | 357 | 385.0 | 414.0 | 358.0 | 384.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'Q', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'S', '10 ': 'S', '11 ': 'V', '12 ': 'S', '13 ': 'A', '14 ': 'S', '15 ': 'V', '16 ': 'G', '17 ': 'D', '18 ': 'R', '19 ': 'V', '20 ': 'T', '21 ': 'I', '22 ': 'T', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'G', '29 ': 'I', '36 ': 'S', '37 ': 'S', '38 ': 'W'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'P', '51 ': 'K', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'A', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'L', '68 ': 'Q', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'S', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'A', '108 ': 'N', '109 ': 'S', '114 ': 'F', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTTACTAGACCTTTG-1_contig_2 | TCCTGCTTTCTTCGATGGGGAGTGACTCCTGTGCCCCACCATGGACACACTTTGCTCCACGCTCCTGCTGCTGACCATCCCTTCATGGGTCTTGTCCCAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAGACGGGTAGTTAGCAGTGGCTGGTACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV2-5*02 | IGHD6-19*01 | IGHJ5*02 | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAGACGGGTAGTTAGCAGTGGCTGGTACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAGACNNNNNNNTAGCAGTGGCTGGTACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAHRRVVSSGWYNWFDPWGQGTLVTVSS | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAHRXXXSSGWYNWFDPWGQGTLVTVSS | 1 | 301 | 309.0 | 322.0 | 323 | 373 | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAGAC | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAHR | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAGAC | QITLKESGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCAHR | TAGCAGTGGCTGGT | SSGW | TAGCAGTGGCTGGT | SSGW | ACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | ACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | CAGATCACCTTGAAGGAGTCTGGTCCTACGCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCT | QITLKESGPTLVKPTQTLTLTCTFS | GGGTTCTCACTCAGCACTAGTGGAGTGGGT | GFSLSTSGVG | GTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTC | VGWIRQPPGKALEWLAL | ATTTATTGGGATGATGATAAG | IYWDDDK | CGCTACAGCCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGT | RYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCACACAGACGGGTAGTTAGCAGTGGCTGGTACAACTGGTTCGACCCC | AHRRVVSSGWYNWFDP | TGTGCACACAGACGGGTAGTTAGCAGTGGCTGGTACAACTGGTTCGACCCCTGG | 54.0 | CAHRRVVSSGWYNWFDPW | 18.0 | 470.828 | 27.605 | 98.744 | 97S301M143S | 405S5N14M122S2N | 419S51M71S | 1.164e-134 | 0.001186 | 9.913e-25 | 100.0 | 100.0 | 100.0 | 98 | 398 | 1 | 301 | 406.0 | 419.0 | 6.0 | 19.0 | 420 | 470 | 1 | 51 | 98 | 172 | 173 | 202 | 203 | 253 | 254 | 274 | 275 | 388 | 437.0 | 469.0 | 389.0 | 436.0 | GGGTAGT | 7 | null | 0.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'I', '3 ': 'T', '4 ': 'L', '5 ': 'K', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'P', '11 ': 'T', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'T', '17 ': 'Q', '18 ': 'T', '19 ': 'L', '20 ': 'T', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'T', '25 ': 'F', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'S', '30 ': 'L', '31 ': 'S', '34 ': 'T', '35 ': 'S', '36 ': 'G', '37 ': 'V', '38 ': 'G'}, 'fwh2': {'39 ': 'V', '40 ': 'G', '41 ': 'W', '42 ': 'I', '43 ': 'R', '44 ': 'Q', '45 ': 'P', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'A', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'L', '54 ': 'A', '55 ': 'L'}, 'cdrh2': {'56 ': 'I', '57 ': 'Y', '58 ': 'W', '59 ': 'D', '63 ': 'D', '64 ': 'D', '65 ': 'K'}, 'fwh3': {'66 ': 'R', '67 ': 'Y', '68 ': 'S', '69 ': 'P', '70 ': 'S', '71 ': 'L', '72 ': 'K', '74 ': 'S', '75 ': 'R', '76 ': 'L', '77 ': 'T', '78 ': 'I', '79 ': 'T', '80 ': 'K', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'Q', '87 ': 'V', '88 ': 'V', '89 ': 'L', '90 ': 'T', '91 ': 'M', '92 ': 'T', '93 ': 'N', '94 ': 'M', '95 ': 'D', '96 ': 'P', '97 ': 'V', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'T', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'H', '107 ': 'R', '108 ': 'R', '109 ': 'V', '110 ': 'V', '111 ': 'S', '111A': 'S', '112B': 'G', '112A': 'W', '112 ': 'Y', '113 ': 'N', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTTACTAGACCTTTG-1_contig_1 | GGGAGAGCCCTGGGGAGGAACTGCTCAGTTAGGACCCAGAGGGAACCATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCCCTCACCTTCGGCCAAGGGACACGACTGGAGATTAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-11*01 | null | IGKJ5*01 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCCCTCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCNNTCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPLTFGQGTRLEIK | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPXTFGQGTRLEIK | 1 | 284 | null | null | 287 | 322 | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWP | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCC | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWP | null | null | null | null | TCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | TFGQGTRLEIK | TCACCTTCGGCCAAGGGACACGACTGGAGATTAAAC | TFGQGTRLEIK | GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPATLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCTAC | QSVSSY | TTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GATGCATCC | DAS | AACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTTTGCAGTTTATTACTGT | NRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYC | TTCGGCCAAGGGACACGACTGGAGATTAAA | FGQGTRLEIK | CAGCAGCGTAGCAACTGGCCCCTCACC | QQRSNWPLT | TGTCAGCAGCGTAGCAACTGGCCCCTCACCTTC | 33.0 | CQQRSNWPLTF | 11.0 | 444.34 | null | 69.904 | 107S284M174S3N | null | 393S2N36M136S | 1.147e-126 | null | 4.98e-16 | 100.0 | null | 100.0 | 108 | 391 | 1 | 284 | null | null | null | null | 394 | 429 | 3 | 38 | 108 | 185 | 186 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 399.0 | 428.0 | 372.0 | 398.0 | CC | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'D', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'R', '108 ': 'S', '109 ': 'N', '114 ': 'W', '115 ': 'P', '116 ': 'L', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'R', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTTACTCACAGGAGT-1_contig_2 | CGAGCCCAGCACTGGAAGTCGCCGGTGTTTCCATTCGGTGATCATCACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGATCTAGGATTTGACTGGTTATCCGTCAACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-30-3*01 | IGHD3-9*01 | IGHJ5*02 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGATCTAGGATTTGACTGGTTATCCGTCAACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGANNNNNNNTTTGACTGGTTATNNNNNNACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDLGFDWLSVNNWFDPWGQGTLVTVSS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARXXXFDWLXXXNWFDPWGQGTLVTVSS | 1 | 296 | 304.0 | 316.0 | 323 | 373 | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGA | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR | TTTGACTGGTTAT | FDWL | TTTGACTGGTTAT | FDWL | ACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | ACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | NWFDPWGQGTLVTVSS | CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCT | QVQLVESGGGVVQPGRSLRLSCAAS | GGATTCACCTTCAGTAGCTATGCT | GFTFSSYA | ATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTT | MHWVRQAPGKGLEWVAV | ATATCATATGATGGAAGCAATAAA | ISYDGSNK | TACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGAGATCTAGGATTTGACTGGTTATCCGTCAACAACTGGTTCGACCCC | ARDLGFDWLSVNNWFDP | TGTGCGAGAGATCTAGGATTTGACTGGTTATCCGTCAACAACTGGTTCGACCCCTGG | 57.0 | CARDLGFDWLSVNNWFDPW | 19.0 | 463.037 | 25.682 | 98.744 | 124S296M148S | 427S12N13M128S6N | 446S51M71S | 2.7120000000000002e-132 | 0.004726 | 1.042e-24 | 100.0 | 100.0 | 100.0 | 125 | 420 | 1 | 296 | 428.0 | 440.0 | 13.0 | 25.0 | 447 | 497 | 1 | 51 | 125 | 199 | 200 | 223 | 224 | 274 | 275 | 298 | 299 | 412 | 464.0 | 496.0 | 413.0 | 463.0 | TCTAGGA | 7 | CCGTCA | 6.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'V', '13 ': 'V', '14 ': 'Q', '15 ': 'P', '16 ': 'G', '17 ': 'R', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'A'}, 'fwh2': {'39 ': 'M', '40 ': 'H', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'A', '55 ': 'V'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'Y', '59 ': 'D', '62 ': 'G', '63 ': 'S', '64 ': 'N', '65 ': 'K'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'L', '109 ': 'G', '110 ': 'F', '111 ': 'D', '111A': 'W', '111B': 'L', '112B': 'S', '112A': 'V', '112 ': 'N', '113 ': 'N', '114 ': 'W', '115 ': 'F', '116 ': 'D', '117 ': 'P'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTTACTCACAGGAGT-1_contig_1 | AATGCCTGGGTCAGAGCTCTGGGGAGGAACTGCTCAGTTAGGACCCAGACGGAACCATGGAAGCCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACTGGAGAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-15*01 | null | IGKJ1*01 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPPWTFGQGTKVEIK | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPPWTFGQGTKVEIK | 1 | 287 | null | null | 288 | 325 | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPP | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGTCAGCAGTATAATAACTGGCCTCC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPP | null | null | null | null | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTGTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVMTQSPATLSVSPGERATLSCRAS | CAGAGTGTTAGCAGCAAC | QSVSSN | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | ACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGAGTTCACTCTCACCATCAGCAGCCTGCAGTCTGAAGATTTTGCAGTTTATTACTGT | TRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | CAGCAGTATAATAACTGGCCTCCGTGGACG | QQYNNWPPWT | TGTCAGCAGTATAATAACTGGCCTCCGTGGACGTTC | 36.0 | CQQYNNWPPWTF | 12.0 | 449.014 | null | 73.749 | 116S287M174S | null | 403S38M136S | 4.5650000000000003e-128 | null | 3.54e-17 | 100.0 | null | 100.0 | 117 | 403 | 1 | 287 | null | null | null | null | 404 | 441 | 1 | 38 | 117 | 194 | 195 | 212 | 213 | 263 | 264 | 272 | 273 | 380 | 411.0 | 440.0 | 381.0 | 410.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'A', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '36 ': 'S', '37 ': 'S', '38 ': 'N'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'T', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'E', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'S', '94 ': 'L', '95 ': 'Q', '96 ': 'S', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'N', '109 ': 'N', '113 ': 'W', '114 ': 'P', '115 ': 'P', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTTACTCACCGAAAG-1_contig_1 | AGCTCTGAGAGAGGAGCCTTAGCCCTGGATTCCAAGGCCTATCCACTTGGTGATCAGCACTGAGCACCGAGGATTCACCATGGAACTGGGGCTCCGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGATCCTTGAATATTGTAGTAGTACCAGCTGCTATAGCAGTGGCTGGGCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-21*01 | IGHD2-2*02 | IGHJ4*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGATCCTTGAATATTGTAGTAGTACCAGCTGCTATAGCAGTGGCTGGGCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGANNNNNNNATATTGTAGTAGTACCAGCTGCTATANNNNNNNNNNNNNNTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARSLNIVVVPAAIAVAGPDYWGQGTLVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARXXXIVVVPAAIXXXXXDYWGQGTLVTVSS | 1 | 294 | 302.0 | 327.0 | 342 | 382 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAR | ATATTGTAGTAGTACCAGCTGCTATA | IVVVPAAI | ATATTGTAGTAGTACCAGCTGCTATA | IVVVPAAI | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG | DYWGQGTLVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCAAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACCTTCAGTAGCTATAGC | GFTFSSYS | ATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCC | MNWVRQAPGKGLEWVSS | ATTAGTAGTAGTAGTAGTTACATA | ISSSSSYI | TACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGT | YYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYC | TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA | WGQGTLVTVSS | GCGAGATCCTTGAATATTGTAGTAGTACCAGCTGCTATAGCAGTGGCTGGGCCTGACTAC | ARSLNIVVVPAAIAVAGPDY | TGTGCGAGATCCTTGAATATTGTAGTAGTACCAGCTGCTATAGCAGTGGCTGGGCCTGACTACTGG | 66.0 | CARSLNIVVVPAAIAVAGPDYW | 22.0 | 459.921 | 50.677 | 79.518 | 136S294M159S2N | 437S3N26M126S2N | 477S7N41M71S | 2.43e-131 | 1.466e-10 | 6.633e-19 | 100.0 | 100.0 | 100.0 | 137 | 430 | 1 | 294 | 438.0 | 463.0 | 4.0 | 29.0 | 478 | 518 | 8 | 48 | 137 | 211 | 212 | 235 | 236 | 286 | 287 | 310 | 311 | 424 | 485.0 | 517.0 | 425.0 | 484.0 | TCCTTGA | 7 | GCAGTGGCTGGGCC | 14.0 | GGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'S', '37 ': 'Y', '38 ': 'S'}, 'fwh2': {'39 ': 'M', '40 ': 'N', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'S', '55 ': 'S'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'S', '59 ': 'S', '62 ': 'S', '63 ': 'S', '64 ': 'Y', '65 ': 'I'}, 'fwh3': {'66 ': 'Y', '67 ': 'Y', '68 ': 'A', '69 ': 'D', '70 ': 'S', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'N', '83 ': 'A', '84 ': 'K', '85 ': 'N', '86 ': 'S', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'S', '108 ': 'L', '109 ': 'N', '110 ': 'I', '111 ': 'V', '111A': 'V', '111B': 'V', '111C': 'P', '112D': 'A', '112C': 'A', '112B': 'I', '112A': 'A', '112 ': 'V', '113 ': 'A', '114 ': 'G', '115 ': 'P', '116 ': 'D', '117 ': 'Y'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'L', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTTACTCACCGAAAG-1_contig_2 | GATCAGGACTCCTCAGTTCACCTTCTCACAATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTAATGCTCTGGGTCTCTGGATCCAGTGGGGATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV2-28*01 | null | IGKJ1*01 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPWTFGQGTKVEIK | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPWTFGQGTKVEIK | 1 | 299 | null | null | 300 | 337 | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTP | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATAGTAATGGATACAACTATTTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTATTTGGGTTCTAATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAAGCTCTACAAACTCC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTP | null | null | null | null | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC | WTFGQGTKVEIK | GATATTGTGATGACTCAGTCTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGT | DIVMTQSPLSLPVTPGEPASISCRSS | CAGAGCCTCCTGCATAGTAATGGATACAACTAT | QSLLHSNGYNY | TTGGATTGGTACCTGCAGAAGCCAGGGCAGTCTCCACAGCTCCTGATCTAT | LDWYLQKPGQSPQLLIY | TTGGGTTCT | LGS | AATCGGGCCTCCGGGGTCCCTGACAGGTTCAGTGGCAGTGGATCAGGCACAGATTTTACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTATTACTGC | NRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYC | TTCGGCCAAGGGACCAAGGTGGAAATCAAA | FGQGTKVEIK | ATGCAAGCTCTACAAACTCCGTGGACG | MQALQTPWT | TGCATGCAAGCTCTACAAACTCCGTGGACGTTC | 33.0 | CMQALQTPWTF | 11.0 | 467.712 | null | 73.749 | 90S299M174S3N | null | 389S38M136S | 1.052e-133 | null | 3.452e-17 | 100.0 | null | 100.0 | 91 | 389 | 1 | 299 | null | null | null | null | 390 | 427 | 1 | 38 | 91 | 168 | 169 | 201 | 202 | 252 | 253 | 261 | 262 | 369 | 397.0 | 426.0 | 370.0 | 396.0 | null | 0 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'D', '2 ': 'I', '3 ': 'V', '4 ': 'M', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'L', '10 ': 'S', '11 ': 'L', '12 ': 'P', '13 ': 'V', '14 ': 'T', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'P', '19 ': 'A', '20 ': 'S', '21 ': 'I', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'S', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'L', '30 ': 'L', '31 ': 'H', '32 ': 'S', '34 ': 'N', '35 ': 'G', '36 ': 'Y', '37 ': 'N', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'D', '41 ': 'W', '42 ': 'Y', '43 ': 'L', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'S', '50 ': 'P', '51 ': 'Q', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'L', '57 ': 'G', '65 ': 'S'}, 'fwk3': {'66 ': 'N', '67 ': 'R', '68 ': 'A', '69 ': 'S', '70 ': 'G', '71 ': 'V', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'K', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'V', '95 ': 'E', '96 ': 'A', '97 ': 'E', '98 ': 'D', '99 ': 'V', '100 ': 'G', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'M', '106 ': 'Q', '107 ': 'A', '108 ': 'L', '109 ': 'Q', '114 ': 'T', '115 ': 'P', '116 ': 'W', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'V', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTTACTCAGTCCTTC-1_contig_2 | AGCTCTGGGAGAGGAGCCCCAGCCTTGGGATTCCCAAGTGTTTTCATTCAGTGATCAGGACTGAACACAGAGGACTCACCATGGAGTTTGGGCTGAGCTGGATTTTCCTTGCTGCTATTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACCCATGGTTCGAGAAGAGACAAGAACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV3-15*01 | IGHD3-10*01 | IGHJ6*02 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACCCATGGTTCGAGAAGAGACAAGAACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACNNATGGTTCGNNNNNNNNNNNNNACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTHGSRRDKNYGMDVWGQGTTVTVSS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTXGSXXXXXYGMDVWGQGTTVTVSS | 1 | 299 | 302.0 | 309.0 | 323 | 372 | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCAC | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCAC | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTT | ATGGTTCG | GS | ATGGTTCG | GS | ACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YGMDVWGQGTTVTVSS | ACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YGMDVWGQGTTVTVSS | GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCT | EVQLVESGGGLVKPGGSLRLSCAAS | GGATTCACTTTCAGTAACGCCTGG | GFTFSNAW | ATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGT | MSWVRQAPGKGLEWVGR | ATTAAAAGCAAAACTGATGGTGGGACAACA | IKSKTDGGTT | GACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGT | DYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | ACCACCCATGGTTCGAGAAGAGACAAGAACTACGGTATGGACGTC | TTHGSRRDKNYGMDV | TGTACCACCCATGGTTCGAGAAGAGACAAGAACTACGGTATGGACGTCTGG | 51.0 | CTTHGSRRDKNYGMDVW | 17.0 | 467.712 | 16.069 | 96.822 | 137S299M145S3N | 438S8N8M135S15N | 459S12N50M72S | 1.082e-133 | 3.788 | 4.042e-24 | 100.0 | 100.0 | 100.0 | 138 | 436 | 1 | 299 | 439.0 | 446.0 | 9.0 | 16.0 | 460 | 509 | 13 | 62 | 138 | 212 | 213 | 236 | 237 | 287 | 288 | 317 | 318 | 431 | 477.0 | 509.0 | 432.0 | 476.0 | CC | 2 | AGAAGAGACAAGA | 13.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'E', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'E', '7 ': 'S', '8 ': 'G', '9 ': 'G', '11 ': 'G', '12 ': 'L', '13 ': 'V', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'S', '19 ': 'L', '20 ': 'R', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'A', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'F', '29 ': 'T', '30 ': 'F', '35 ': 'S', '36 ': 'N', '37 ': 'A', '38 ': 'W'}, 'fwh2': {'39 ': 'M', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'K', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'V', '54 ': 'G', '55 ': 'R'}, 'cdrh2': {'56 ': 'I', '57 ': 'K', '58 ': 'S', '59 ': 'K', '60 ': 'T', '61 ': 'D', '62 ': 'G', '63 ': 'G', '64 ': 'T', '65 ': 'T'}, 'fwh3': {'66 ': 'D', '67 ': 'Y', '68 ': 'A', '69 ': 'A', '70 ': 'P', '71 ': 'V', '72 ': 'K', '74 ': 'G', '75 ': 'R', '76 ': 'F', '77 ': 'T', '78 ': 'I', '79 ': 'S', '80 ': 'R', '81 ': 'D', '82 ': 'D', '83 ': 'S', '84 ': 'K', '85 ': 'N', '86 ': 'T', '87 ': 'L', '88 ': 'Y', '89 ': 'L', '90 ': 'Q', '91 ': 'M', '92 ': 'N', '93 ': 'S', '94 ': 'L', '95 ': 'K', '96 ': 'T', '97 ': 'E', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'T', '106 ': 'T', '107 ': 'H', '108 ': 'G', '109 ': 'S', '110 ': 'R', '111 ': 'R', '111A': 'D', '112A': 'K', '112 ': 'N', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTTACTCAGTCCTTC-1_contig_1 | GGGGGCACCAGGGGTCCCTTCCAATATCAGCACCATGGCCTGGACTCCTCTCTTTCTGTTCCTCCTCACTTGCTGCCCAGGGTCCAATTCCCAGGCTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGGCTCCAGCACTGGAGCTGTCACCAGTGGTCATTATCCCTACTGGTTCCAGCAGAAGCCTGGCCAAGCCCCCAGGACACTGATTTATGATACAAGCAACAAACACTCCTGGACCCCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACCCTTTCGGGTGCGCAGCCTGAGGATGAGGCTGAGTATTACTGCTTGCTCTCCTATAGTGGTGCCGGAGGGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | L | F | T | F | T | F | T | IGLV7-46*01 | null | IGLJ2*01 | CAGGCTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGGCTCCAGCACTGGAGCTGTCACCAGTGGTCATTATCCCTACTGGTTCCAGCAGAAGCCTGGCCAAGCCCCCAGGACACTGATTTATGATACAAGCAACAAACACTCCTGGACCCCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACCCTTTCGGGTGCGCAGCCTGAGGATGAGGCTGAGTATTACTGCTTGCTCTCCTATAGTGGTGCCGGAGGGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | CAGGCTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGGCTCCAGCACTGGAGCTGTCACCAGTGGTCATTATCCCTACTGGTTCCAGCAGAAGCCTGGCCAAGCCCCCAGGACACTGATTTATGATACAAGCAACAAACACTCCTGGACACCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACCCTTTCGGGTGCGCAGCCTGAGGATGAGGCTGAGTATTACTGCTTGCTCTCCTATAGTGGTGCNNNNNNGGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | QAVVTQEPSLTVSPGGTVTLTCGSSTGAVTSGHYPYWFQQKPGQAPRTLIYDTSNKHSWTPARFSGSLLGGKAALTLSGAQPEDEAEYYCLLSYSGAGGVFGGGTKLTVL | QAVVTQEPSLTVSPGGTVTLTCGSSTGAVTSGHYPYWFQQKPGQAPRTLIYDTSNKHSWTPARFSGSLLGGKAALTLSGAQPEDEAEYYCLLSYSGAXXVFGGGTKLTVL | 1 | 290 | null | null | 297 | 331 | CAGGCTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGGCTCCAGCACTGGAGCTGTCACCAGTGGTCATTATCCCTACTGGTTCCAGCAGAAGCCTGGCCAAGCCCCCAGGACACTGATTTATGATACAAGCAACAAACACTCCTGGACCCCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACCCTTTCGGGTGCGCAGCCTGAGGATGAGGCTGAGTATTACTGCTTGCTCTCCTATAGTGGTGC | QAVVTQEPSLTVSPGGTVTLTCGSSTGAVTSGHYPYWFQQKPGQAPRTLIYDTSNKHSWTPARFSGSLLGGKAALTLSGAQPEDEAEYYCLLSYSGA | CAGGCTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGGCTCCAGCACTGGAGCTGTCACCAGTGGTCATTATCCCTACTGGTTCCAGCAGAAGCCTGGCCAAGCCCCCAGGACACTGATTTATGATACAAGCAACAAACACTCCTGGACACCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACCCTTTCGGGTGCGCAGCCTGAGGATGAGGCTGAGTATTACTGCTTGCTCTCCTATAGTGGTGC | QAVVTQEPSLTVSPGGTVTLTCGSSTGAVTSGHYPYWFQQKPGQAPRTLIYDTSNKHSWTPARFSGSLLGGKAALTLSGAQPEDEAEYYCLLSYSGA | null | null | null | null | GGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | GGTATTCGGCGGAGGGACCAAGCTGACCGTCCTAG | VFGGGTKLTVL | CAGGCTGTGGTGACTCAGGAGCCCTCACTGACTGTGTCCCCAGGAGGGACAGTCACTCTCACCTGTGGCTCCAGC | QAVVTQEPSLTVSPGGTVTLTCGSS | ACTGGAGCTGTCACCAGTGGTCATTAT | TGAVTSGHY | CCCTACTGGTTCCAGCAGAAGCCTGGCCAAGCCCCCAGGACACTGATTTAT | PYWFQQKPGQAPRTLIY | GATACAAGC | DTS | AACAAACACTCCTGGACCCCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGGCAAAGCTGCCCTGACCCTTTCGGGTGCGCAGCCTGAGGATGAGGCTGAGTATTACTGC | NKHSWTPARFSGSLLGGKAALTLSGAQPEDEAEYYC | TTCGGCGGAGGGACCAAGCTGACCGTCCTA | FGGGTKLTVL | TTGCTCTCCTATAGTGGTGCCGGAGGGGTA | LLSYSGAGGV | TGCTTGCTCTCCTATAGTGGTGCCGGAGGGGTATTC | 36.0 | CLLSYSGAGGVF | 12.0 | 450.572 | null | 67.981 | 91S290M252S4N | null | 387S3N35M211S | 1.7090000000000002e-128 | null | 2.12e-15 | 99.655 | null | 100.0 | 92 | 381 | 1 | 290 | null | null | null | null | 388 | 422 | 4 | 38 | 92 | 166 | 167 | 193 | 194 | 244 | 245 | 253 | 254 | 361 | 392.0 | 421.0 | 362.0 | 391.0 | CGGAGG | 6 | null | null | GTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGTGACTTCTACCCGGGAGCCGTGACAGTGGCCTGGAAGGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTA | Bulk | 1 | {'fwl1': {'1 ': 'Q', '2 ': 'A', '3 ': 'V', '4 ': 'V', '5 ': 'T', '6 ': 'Q', '7 ': 'E', '8 ': 'P', '9 ': 'S', '11 ': 'L', '12 ': 'T', '13 ': 'V', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'G', '18 ': 'T', '19 ': 'V', '20 ': 'T', '21 ': 'L', '22 ': 'T', '23 ': 'C', '24 ': 'G', '25 ': 'S', '26 ': 'S'}, 'cdrl1': {'27 ': 'T', '28 ': 'G', '29 ': 'A', '30 ': 'V', '31 ': 'T', '35 ': 'S', '36 ': 'G', '37 ': 'H', '38 ': 'Y'}, 'fwl2': {'39 ': 'P', '40 ': 'Y', '41 ': 'W', '42 ': 'F', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'T', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrl2': {'56 ': 'D', '57 ': 'T', '65 ': 'S'}, 'fwl3': {'66 ': 'N', '67 ': 'K', '68 ': 'H', '69 ': 'S', '70 ': 'W', '71 ': 'T', '72 ': 'P', '74 ': 'A', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'L', '83 ': 'L', '84 ': 'G', '85 ': 'G', '86 ': 'K', '87 ': 'A', '88 ': 'A', '89 ': 'L', '90 ': 'T', '91 ': 'L', '92 ': 'S', '93 ': 'G', '94 ': 'A', '95 ': 'Q', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'E', '100 ': 'A', '101 ': 'E', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrl3': {'105 ': 'L', '106 ': 'L', '107 ': 'S', '108 ': 'Y', '109 ': 'S', '113 ': 'G', '114 ': 'A', '115 ': 'G', '116 ': 'G', '117 ': 'V'}, 'fwl4': {'118 ': 'F', '119 ': 'G', '120 ': 'G', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'T', '126 ': 'V', '127 ': 'L'}} | ||||| |
1279049 | https://doi.org/10.1038/s41586-022-05371-z | Jaffe et al., 2022 | human | 35 | PBMC | Naive-B-Cells | null | SARS-COV-2 | Donor-2 | no | 8,954 | All | Paired | 1279049_1_Paired_All.csv.gz | ACTTACTGTGACTACT-1_contig_2 | TGGGGACCCAAAAACCACACCCCTCCTTGGGAGAATCCCCTAGATCACAGCTCCTCACCATGGACTGGACCTGGAGCATCCTTTTCTTGGTGGCAGCAGCAACAGGTGCCCACTCCCAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGATTTCAGCGGAGTAGTGGTTATTACTTGGGGTGTCACCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAGGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | H | F | T | F | T | F | T | IGHV1-18*01 | IGHD3-22*01 | IGHJ6*02 | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGATTTCAGCGGAGTAGTGGTTATTACTTGGGGTGTCACCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGANNNNNNNNNAGTAGTGGTTATTACTNNNNNNNNNNNCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDFSGVVVITWGVTYGMDVWGQGTTVTVSS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARXXXXVVVITXXXXYGMDVWGQGTTVTVSS | 1 | 296 | 306.0 | 321.0 | 333 | 381 | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAR | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAGA | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAR | AGTAGTGGTTATTACT | VVVIT | AGTAGTGGTTATTACT | VVVIT | CTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YGMDVWGQGTTVTVSS | CTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | YGMDVWGQGTTVTVSS | CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCT | QVQLVQSGAEVKKPGASVKVSCKAS | GGTTACACCTTTACCAGCTATGGT | GYTFTSYG | ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGG | ISWVRQAPGQGLEWMGW | ATCAGCGCTTACAATGGTAACACA | ISAYNGNT | AACTATGCACAGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGT | NYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYC | TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA | WGQGTTVTVSS | GCGAGAGATTTCAGCGGAGTAGTGGTTATTACTTGGGGTGTCACCTACGGTATGGACGTC | ARDFSGVVVITWGVTYGMDV | TGTGCGAGAGATTTCAGCGGAGTAGTGGTTATTACTTGGGGTGTCACCTACGGTATGGACGTCTGG | 66.0 | CARDFSGVVVITWGVTYGMDVW | 22.0 | 463.037 | 31.45 | 94.899 | 116S296M157S | 421S13N16M132S2N | 448S13N49M72S | 2.717e-132 | 8.687e-05 | 1.5e-23 | 100.0 | 100.0 | 100.0 | 117 | 412 | 1 | 296 | 422.0 | 437.0 | 14.0 | 29.0 | 449 | 497 | 14 | 62 | 117 | 191 | 192 | 215 | 216 | 266 | 267 | 290 | 291 | 404 | 465.0 | 497.0 | 405.0 | 464.0 | TTTCAGCGG | 9 | TGGGGTGTCAC | 11.0 | GGGAGTGCATCCGCCCCAACCCTTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTG | IGHM | 1 | {'fwh1': {'1 ': 'Q', '2 ': 'V', '3 ': 'Q', '4 ': 'L', '5 ': 'V', '6 ': 'Q', '7 ': 'S', '8 ': 'G', '9 ': 'A', '11 ': 'E', '12 ': 'V', '13 ': 'K', '14 ': 'K', '15 ': 'P', '16 ': 'G', '17 ': 'A', '18 ': 'S', '19 ': 'V', '20 ': 'K', '21 ': 'V', '22 ': 'S', '23 ': 'C', '24 ': 'K', '25 ': 'A', '26 ': 'S'}, 'cdrh1': {'27 ': 'G', '28 ': 'Y', '29 ': 'T', '30 ': 'F', '35 ': 'T', '36 ': 'S', '37 ': 'Y', '38 ': 'G'}, 'fwh2': {'39 ': 'I', '40 ': 'S', '41 ': 'W', '42 ': 'V', '43 ': 'R', '44 ': 'Q', '45 ': 'A', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'G', '50 ': 'L', '51 ': 'E', '52 ': 'W', '53 ': 'M', '54 ': 'G', '55 ': 'W'}, 'cdrh2': {'56 ': 'I', '57 ': 'S', '58 ': 'A', '59 ': 'Y', '62 ': 'N', '63 ': 'G', '64 ': 'N', '65 ': 'T'}, 'fwh3': {'66 ': 'N', '67 ': 'Y', '68 ': 'A', '69 ': 'Q', '70 ': 'K', '71 ': 'L', '72 ': 'Q', '74 ': 'G', '75 ': 'R', '76 ': 'V', '77 ': 'T', '78 ': 'M', '79 ': 'T', '80 ': 'T', '81 ': 'D', '82 ': 'T', '83 ': 'S', '84 ': 'T', '85 ': 'S', '86 ': 'T', '87 ': 'A', '88 ': 'Y', '89 ': 'M', '90 ': 'E', '91 ': 'L', '92 ': 'R', '93 ': 'S', '94 ': 'L', '95 ': 'R', '96 ': 'S', '97 ': 'D', '98 ': 'D', '99 ': 'T', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrh3': {'105 ': 'A', '106 ': 'R', '107 ': 'D', '108 ': 'F', '109 ': 'S', '110 ': 'G', '111 ': 'V', '111A': 'V', '111B': 'V', '111C': 'I', '112D': 'T', '112C': 'W', '112B': 'G', '112A': 'V', '112 ': 'T', '113 ': 'Y', '114 ': 'G', '115 ': 'M', '116 ': 'D', '117 ': 'V'}, 'fwh4': {'118 ': 'W', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'T', '124 ': 'V', '125 ': 'T', '126 ': 'V', '127 ': 'S', '128 ': 'S'}} | |Deletions: 10, 73|||| | ACTTACTGTGACTACT-1_contig_1 | AGAGCTCTGGAGAAGAGCTGCTCAGTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCCATGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | K | F | T | F | T | F | T | IGKV3-20*01 | null | IGKJ2*01 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCCATGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACCNNTGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPMYTFGQGTKLEIK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPXYTFGQGTKLEIK | 1 | 287 | null | null | 290 | 328 | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCACC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSP | null | null | null | null | TGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | TGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC | YTFGQGTKLEIK | GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGT | EIVLTQSPGTLSLSPGERATLSCRAS | CAGAGTGTTAGCAGCAGCTAC | QSVSSSY | TTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTAT | LAWYQQKPGQAPRLLIY | GGTGCATCC | GAS | AGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGT | SRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYC | TTTGGCCAGGGGACCAAGCTGGAGATCAAA | FGQGTKLEIK | CAGCAGTATGGTAGCTCACCCATGTACACT | QQYGSSPMYT | TGTCAGCAGTATGGTAGCTCACCCATGTACACTTTT | 36.0 | CQQYGSSPMYTF | 12.0 | 449.014 | null | 75.672 | 104S287M177S3N | null | 393S39M136S | 4.515e-128 | null | 9.188e-18 | 100.0 | null | 100.0 | 105 | 391 | 1 | 287 | null | null | null | null | 394 | 432 | 1 | 39 | 105 | 182 | 183 | 203 | 204 | 254 | 255 | 263 | 264 | 371 | 402.0 | 431.0 | 372.0 | 401.0 | CA | 2 | null | null | GAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGC | Bulk | 1 | {'fwk1': {'1 ': 'E', '2 ': 'I', '3 ': 'V', '4 ': 'L', '5 ': 'T', '6 ': 'Q', '7 ': 'S', '8 ': 'P', '9 ': 'G', '10 ': 'T', '11 ': 'L', '12 ': 'S', '13 ': 'L', '14 ': 'S', '15 ': 'P', '16 ': 'G', '17 ': 'E', '18 ': 'R', '19 ': 'A', '20 ': 'T', '21 ': 'L', '22 ': 'S', '23 ': 'C', '24 ': 'R', '25 ': 'A', '26 ': 'S'}, 'cdrk1': {'27 ': 'Q', '28 ': 'S', '29 ': 'V', '30 ': 'S', '36 ': 'S', '37 ': 'S', '38 ': 'Y'}, 'fwk2': {'39 ': 'L', '40 ': 'A', '41 ': 'W', '42 ': 'Y', '43 ': 'Q', '44 ': 'Q', '45 ': 'K', '46 ': 'P', '47 ': 'G', '48 ': 'Q', '49 ': 'A', '50 ': 'P', '51 ': 'R', '52 ': 'L', '53 ': 'L', '54 ': 'I', '55 ': 'Y'}, 'cdrk2': {'56 ': 'G', '57 ': 'A', '65 ': 'S'}, 'fwk3': {'66 ': 'S', '67 ': 'R', '68 ': 'A', '69 ': 'T', '70 ': 'G', '71 ': 'I', '72 ': 'P', '74 ': 'D', '75 ': 'R', '76 ': 'F', '77 ': 'S', '78 ': 'G', '79 ': 'S', '80 ': 'G', '83 ': 'S', '84 ': 'G', '85 ': 'T', '86 ': 'D', '87 ': 'F', '88 ': 'T', '89 ': 'L', '90 ': 'T', '91 ': 'I', '92 ': 'S', '93 ': 'R', '94 ': 'L', '95 ': 'E', '96 ': 'P', '97 ': 'E', '98 ': 'D', '99 ': 'F', '100 ': 'A', '101 ': 'V', '102 ': 'Y', '103 ': 'Y', '104 ': 'C'}, 'cdrk3': {'105 ': 'Q', '106 ': 'Q', '107 ': 'Y', '108 ': 'G', '109 ': 'S', '113 ': 'S', '114 ': 'P', '115 ': 'M', '116 ': 'Y', '117 ': 'T'}, 'fwk4': {'118 ': 'F', '119 ': 'G', '120 ': 'Q', '121 ': 'G', '122 ': 'T', '123 ': 'K', '124 ': 'L', '125 ': 'E', '126 ': 'I', '127 ': 'K'}} | ||||| |
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