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stands, creating expansive meadows, and generally prefers mud or sand substrate for
colonization. Their thick rhizomes can be found penetrating to depths of 20 cm below
the surface (Phillips and Meñez 1988; Fonseca 1994; GMP 2004; Short et al. 2010d). It
can be long-lived and is extremely resilient to storms and disturbances; however, it has
very slow rhizome expansion rates which can slow the regrowth process of this species
following a disturbance event (Whitfield et al. 2004). Individual shoots of the plant have
been found to live for over 10 years, enduring seasonal temperature changes and
powerful tropical storms (Phillips and Meñez 1988; Fonseca, 1994; GMP 2004).
From the two methods of plant increase and dispersal used by T. testudinum,
sexual reproduction was found to be secondary to rhizome elongation and clonal growth
(Phillips 1960; Zieman 1972; Les 1988; Gallegos et al. 1993; Schlueter and Guttman
1998). Thalassia testudinum plays an important role in sediment production and is very
important in the prevention of coastal erosion (Zieman 1982; UNESCO 1998; Hemminga
and Duarte 2000; Green and Short 2003; Larkum et al. 2006). It can be found in low
density in oligotrophic areas (low nutrients) and is replaced by other species when there
are continuous high nutrient inputs (Fourqurean and Rutten 2004). Because T.
testudinum is a major habitat-forming species that cannot be replaced functionally by
another species, it is suggested that its available habitat should be closely monitored (Van
Tussenbroek et al. 2006; Short et al. 2010c).
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1.2.2 Syringodium filiforme
Syringodium filiforme, manatee grass, is common, locally dominant seagrass and
a major habitat forming species that occurs in the western tropical Atlantic from Florida
(USA) to Venezuela, including the Gulf of Mexico and the Caribbean Sea, as well as
Bermuda (Short et al. 2010c). Manatee grass is an important food source for many
marine animals including manatees (Zieman 1982), and is named after the endangered
marine mammals. It is distinguished by its cylindrical leaf blades which are
approximately 1-3 mm wide and ranging from 10 to 40 cm in length (Phillips and Meñez
1988; Littler et al. 1989; Fonseca 1994; GMP 2004). The blades are flexible and are able
to withstand high current velocities (Littler et al. 1989), but are also very brittle and
broken pieces are often found floating in large rafts along the coast after a storm event
(Phillips 1960). The leaf length is affected by the depth of the water and the overall leaf
length was found to be greater in deeper waters (Phillips 1960). This species creates a
shallow but dense rhizome matrix and has a tall, dense leaf canopy, which makes this
grass an ideal nursery for many other species (Sargent et al. 1995). The elongated blades
from these plants can trap suspended particulates in the water column, increasing water
clarity and improving the quality of the water by incorporating pollutants into their
biomass and the surrounding sediments (Sargent et al. 1995).
In South Florida S. filiforme is a major habit forming species and is often found
growing together with T. testudinum and H. wrightii (Green and Short 2003; Short et al.
2010c), but can also form large monospecific stands down to 18 m (Phillips and Meñez
1988; Fonseca 1994; GMP 2004). Rhizome elongation and new branch production are
primarily responsible for the dispersion of this species (Phillips 1960). The flowering of
S. filiforme plants in Florida is actually very rare, so it is assumed that for the most part it
does not use sexual reproduction in this region (Phillips 1960). Rhizomes have been
reported to extend into the water column, presumably using this as a means of
reproduction (Phillips and Meñez 1988; Fonseca 1994; GMP 2004).
1.2.3 Halodule wrightii
Halodule wrightii, commonly known as shoal grass, is a seagrass species with a
disjoint global and predominantly tropical distribution, with the main part of its range in
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the Atlantic Ocean and others found in the eastern tropical Pacific and the Indian Ocean
(Short et al. 2010b). It has fine blades with a bidentate tip (Phillips 2006). The blades
grow to between 5 and 40 cm in length and their width can range from 1 to 3 mm
(Phillips and Meñez 1988; Fonseca 1994; GMP 2004). Large continuous meadows are
predominant on shallow shoals and flats, with the grass often exposed at times of low tide
(Phillips and Meñez 1988; Fonseca 1994; GMP 2004).
Halodule wrightii is a common species in Florida and usually found mixed with
other seagrass species (like T. testudinum and S. filiforme) (Short et al. 2010b). It is fast
growing and has a high turnover rate (Sargent et al. 1995; Short et al. 2010b). Shoal
grass is highly tolerant to a range of environmental conditions and is considered a pioneer
species that can replace less tolerant species under conditions of habitat deterioration,
eutrophication, and increased turbidity (Short et al. 2010b). It is usually an early
colonizing species but studies in Florida Bay show that with increased nutrient levels, it
can become the dominant species locally as it is able to out-compete T. testudinum for
light resources (Fourqurean et al. 1995).
1.2.4 Halophila species
Three species of Halophila have been recorded in South Florida waters; H.
decipiens, H. engelmannii, and H. johnsonii. Halophila seagrasses are generally
restricted to low light environments such as deeper water, under docks, as an understory
plant and in shallow turbid waters (Fourqurean et al. 2002). These three species are able
to tolerate a wide range of conditions such as low light intensities and higher levels of
turbidity , which allows them to thrive in environments which are not suitable for other
seagrass species (Fourqurean et al. 2002; GMP 2004; Short et al. 2010a). These plants
are relatively small, just a few cm in height, with shallow root structures that are easily
dislodged. Halophila are also known as pioneer species and are one of the first species to
settle on disturbed sites and available substrate.
1.2.5 Ruppia
The final species of seagrass found in Florida is Ruppia maritima, or widegeon
grass. Fourqurean et al. (2002) found that R. maritima was restricted to areas closer to
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freshwater sources. This species is found to have a high tolerance for low and variable
salinity so they are more prevalent in areas with canal discharges (Lirman et al. 2008).
1.3 Algae: Benthic and Epiphytic
Associated with seagrass beds are characteristic benthic and epiphytic algae,
which attach themselves to sediments, rocky outcroppings, and the seagrasses themselves
(FMNH 2015). Algae are important to consider because they may contribute
significantly to the structure and function of the seagrass community (Heijs 1987, Verheij
and Erftemeijer 1993, Jupp et al. 1996, Sidik et al. 2001). Typical (common) benthic
macroalgae observed in Florida include several species of Red algae (Rhodophyta),
Green algae (Chlorophyta), and Brown algae (Phaeophyta). There are also several types
of Calcareous-green algae (Calcareous-Rhodophyta) that produce calcium carbonate,
which eventually becomes incorporated into the surrounding sediments (FMNH 2015).
Seagrasses provide sufficient surface area on which hundreds of species of epiphytic
algae could attach. The epiphytes cover the tips of the seagrass blades, rather than the
bases, in order to receive more sunlight for photosynthesis, subsequently reducing
seagrass growth as a result of shading. Eventually the epiphytes will become part of the
detritus, along with the seagrass blades as they break off and decompose (FMNH 2015).
Research on drift algae-epiphyte-seagrass interactions suggest that temporary, moderate
cover of macroalgae may benefit seagrass by reducing epiphyte loads if the epiphyte