repo_name string | path string | copies string | size string | content string | license string |
|---|---|---|---|---|---|
cython-testbed/pandas | pandas/core/dtypes/cast.py | 1 | 45059 | """ routings for casting """
from datetime import datetime, timedelta
import numpy as np
import warnings
from pandas._libs import tslib, lib, tslibs
from pandas._libs.tslibs import iNaT, OutOfBoundsDatetime
from pandas.compat import string_types, text_type, PY3
from .common import (ensure_object, is_bool, is_integer... | bsd-3-clause |
jrcohen02/brainx_archive2 | brainx/util.py | 1 | 46884 | """Generic utilities that may be needed by the other modules.
"""
#-----------------------------------------------------------------------------
# Imports
#-----------------------------------------------------------------------------
import warnings
import numpy as np
import networkx as nx
#-------------------------... | bsd-3-clause |
jmmauricio/pypstools | build/lib/pypstools/tools.py | 1 | 39391 | """ Tools for dealing with power system data and results.
(c) 2015 Juan Manuel Mauricio
"""
import numpy as np
import scipy.linalg
import scipy.integrate
import pandas as pd
import h5py
from StringIO import StringIO
def dict_to_h5(file_name, dict_in, dict_deepness=3):
''' Saves a dictionary to hdf5 file
>... | gpl-3.0 |
emunsing/pyiso | tests/test_caiso.py | 1 | 32288 | import os
from pyiso import client_factory
from unittest import TestCase, expectedFailure, skip
from io import StringIO
import pandas as pd
import pytz
from datetime import date, datetime, timedelta
from bs4 import BeautifulSoup
import numpy
import mock
import requests
fixtures_base_path = os.path.join(os.path.dirname... | apache-2.0 |
morris254/polymode | Polymode/Waveguide.py | 5 | 82636 | # _*_ coding=utf-8 _*_
#
#---------------------------------------------------------------------------------
#Copyright © 2009 Andrew Docherty
#
#This program is part of Polymode.
#Polymode is free software: you can redistribute it and/or modify
#it under the terms of the GNU General Public License as published by
#the ... | gpl-3.0 |
Wapaul1/ray | python/ray/worker.py | 1 | 109810 | from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
import atexit
import cloudpickle as pickle
import collections
import colorama
import copy
import hashlib
import inspect
import json
import numpy as np
import os
import redis
import signal
import sys
import thre... | apache-2.0 |
darionyaphet/flink | flink-python/pyflink/table/table_environment.py | 1 | 87180 | ################################################################################
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this... | apache-2.0 |
tepickering/mmtwfs | mmtwfs/zernike.py | 1 | 49016 | # Licensed under a 3-clause BSD style license - see LICENSE.rst
# coding=utf-8
"""
A collection of functions and classes for performing wavefront analysis using Zernike polynomials.
Several of these routines were adapted from https://github.com/tvwerkhoven/libtim-py. They have been updated to make them
more applicable... | gpl-3.0 |
gertingold/scipy | scipy/special/add_newdocs.py | 1 | 197889 | # Docstrings for generated ufuncs
#
# The syntax is designed to look like the function add_newdoc is being
# called from numpy.lib, but in this file add_newdoc puts the
# docstrings in a dictionary. This dictionary is used in
# _generate_pyx.py to generate the docstrings for the ufuncs in
# scipy.special at the C level... | bsd-3-clause |
StuartLittlefair/astropy | astropy/table/tests/test_table.py | 1 | 101279 | # -*- coding: utf-8 -*-
# Licensed under a 3-clause BSD style license - see LICENSE.rst
from astropy.utils.tests.test_metadata import MetaBaseTest
import gc
import sys
import copy
from io import StringIO
from collections import OrderedDict
import pickle
import pytest
import numpy as np
from numpy.testing import asser... | bsd-3-clause |
chrsrds/scikit-learn | sklearn/model_selection/tests/test_validation.py | 1 | 71802 | """Test the validation module"""
import sys
import warnings
import tempfile
import os
from time import sleep
import pytest
import numpy as np
from scipy.sparse import coo_matrix, csr_matrix
from sklearn.exceptions import FitFailedWarning
from sklearn.model_selection.tests.test_search import FailingClassifier
from s... | bsd-3-clause |
UT-CWE/Hyospy | Hyospy_ensemble/lib/SUNTANS/Utils/timeseries.py | 1 | 43648 | # -*- coding: utf-8 -*-
"""
Collection of tools for plotting and analysis of time series data
Created on Wed Feb 06 12:37:17 2013
Author: Matt Rayson
Stanford University
"""
import numpy as np
import matplotlib.pyplot as plt
from matplotlib import mlab
from matplotlib.lines import Line2D
from scipy impor... | mit |
roshantha9/AbstractManycoreSim | src/analyse_results/AnalyseResults_Exp_HEVCSplitTiles_SmartMemSelection.py | 1 | 77352 | import sys, os, csv, pprint, math
#sys.path.append(os.path.join(os.path.dirname(__file__), '..'))
## uncomment when running under CLI only version ##
#import matplotlib
#matplotlib.use('Agg')
#sys.path.append("/shared/storage/cs/staffstore/hrm506/simpy-3.0.5/")
#sys.path.append("/shared/storage/cs/staffstore/hrm506/... | gpl-3.0 |
legacysurvey/legacypipe | py/legacypipe/fit_on_coadds.py | 1 | 31634 | """
Module to generate tims from coadds, to allow Tractor fitting to the coadds
rather than to the individual CCDs.
"""
import numpy as np
class Duck(object):
pass
def _build_objmask(img, ivar, skypix, boxcar=5, boxsize=1024):
"""
Build an object mask by doing a quick estimate of the sky background on a
... | bsd-3-clause |
jshleap/Biogeography | biogeographer.py | 1 | 63976 | #!/usr/bin/python
"""
biogeographer Copyright (C) 2012 Jose Sergio Hleap
This Script will fetch results from GBIF for macoecological and biogeografical studies.
It is Based on the BioGeography is a module under development by Nick Matzke for a Google
Summer of Code 2009 project. It is run through NESCENT's Phyloinform... | gpl-3.0 |
kou/arrow | python/pyarrow/tests/test_array.py | 3 | 93104 | # Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under the Apache License, Version 2.0 (the
# "License"); you may not u... | apache-2.0 |
datapythonista/pandas | pandas/tests/indexing/test_coercion.py | 2 | 40037 | from datetime import timedelta
import itertools
from typing import (
Dict,
List,
)
import numpy as np
import pytest
from pandas.compat import (
IS64,
is_platform_windows,
)
import pandas as pd
import pandas._testing as tm
###############################################################
# Index / Seri... | bsd-3-clause |
credp/lisa | lisa/analysis/tasks.py | 1 | 43232 | # SPDX-License-Identifier: Apache-2.0
#
# Copyright (C) 2015, ARM Limited and contributors.
#
# Licensed under the Apache License, Version 2.0 (the "License"); you may
# not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# ... | apache-2.0 |
hammerlab/cohorts | cohorts/cohort.py | 1 | 69451 | # Copyright (c) 2017. Mount Sinai School of Medicine
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law o... | apache-2.0 |
chitrangpatel/presto | lib/python/sifting.py | 1 | 54180 | #!/usr/bin/env python
import sys
import re
import os
import copy
import numpy as Num
import matplotlib
import matplotlib.pyplot as plt
from presto import candidate_sigma
# Note: the following are global variables that can
# (and should) be set in whatever module
# imports this file. The following values... | gpl-2.0 |
xudesheng/commission-analytics | ca/ca_utility.py | 1 | 63755 | import os
import sys
import csv
import numpy
try:
import ConfigParser
except:
import configparser
import pandas as pd
sys.path.append(".")
try:
from . import casession
from . import algorithm
except:
import casession
import algorithm
def combine_manager_sales(ca_session, algorithm_key):
... | gpl-3.0 |
bajibabu/merlin | src/work_in_progress/oliver/dnn_synth_PROJECTION.py | 2 | 46492 |
import pickle
import gzip
import os, sys, errno
import time
import math
import glob
import struct
import copy
from lxml import etree
# numpy & theano imports need to be done in this order (only for some numpy installations, not sure why)
import numpy
# we need to explicitly import this in some cases, not sure why ... | apache-2.0 |
sonapraneeth-a/object-classification | library/tf/models/MLPClassifier.py | 1 | 39722 | import tensorflow as tf
from sklearn.metrics import confusion_matrix, classification_report, accuracy_score
from sklearn.model_selection import train_test_split
import matplotlib.pyplot as plt
import numpy as np
from library.utils import file_utils
from library.tf import Layers
from library.plot_tools import plot_tools... | mit |
weiHelloWorld/accelerated_sampling_with_autoencoder | MD_simulation_on_alanine_dipeptide/current_work/src/molecule_spec_sutils.py | 1 | 49057 | """Sutils: simulation unilities, some of them are molecule-specific (implemented as methods in subclasses)
"""
from config import *
import random, mdtraj as md
from coordinates_data_files_list import *
from sklearn.cluster import KMeans
from helper_func import *
from functools import reduce
class Sutils(object):
... | mit |
khs26/pele | pele/utils/disconnectivity_graph.py | 1 | 46672 | import copy
from itertools import izip
from collections import deque
import numpy as np
import networkx as nx
from pele.landscape import database2graph
__all__ = ["DisconnectivityGraph"]
class TreeLeastCommonAncestor(object):
"""Find the least common ancestor to a set of trees"""
def __init__(self, trees)... | gpl-3.0 |
lupien/pyHegel | pyHegel/gen_poly.py | 1 | 30296 | # -*- coding: utf-8 -*-
########################## Copyrights and license ############################
# #
# Copyright 2011-2015 Christian Lupien <christian.lupien@usherbrooke.ca> #
# ... | lgpl-3.0 |
chrisdjscott/Atoman | atoman/gui/preferences.py | 1 | 35864 |
"""
Preferences dialog.
@author: Chris Scott
"""
from __future__ import print_function
from __future__ import absolute_import
from __future__ import unicode_literals
import os
import logging
import datetime
import multiprocessing as mp
import functools
from PySide2 import QtGui, QtCore, QtWidgets
import numpy as n... | mit |
microsoft/EconML | econml/dr/_drlearner.py | 1 | 71354 | # Copyright (c) Microsoft Corporation. All rights reserved.
# Licensed under the MIT License.
"""
Doubly Robust Learner. The method uses the doubly robust correction to construct doubly
robust estimates of all the potential outcomes of each samples. Then estimates a CATE model
by regressing the potential outcome diffe... | mit |
timothyb0912/pylogit | tests/test_bootstrap_controller.py | 1 | 52763 | """
Tests for the bootstrap.py (formerly bootstrap_controller.py) file.
"""
import unittest
from collections import OrderedDict
import numpy as np
import numpy.testing as npt
import pandas as pd
from scipy.sparse import csr_matrix, eye
import pylogit.bootstrap as bc
import pylogit.asym_logit as asym
import pylogit.mi... | bsd-3-clause |
gfyoung/scipy | scipy/stats/_distn_infrastructure.py | 1 | 118271 | #
# Author: Travis Oliphant 2002-2011 with contributions from
# SciPy Developers 2004-2011
#
from __future__ import division, print_function, absolute_import
from scipy._lib.six import string_types, exec_, PY3
from scipy._lib._util import getargspec_no_self as _getargspec
import sys
import keyword
import r... | bsd-3-clause |
datapythonista/pandas | pandas/tests/io/excel/test_readers.py | 1 | 54516 | from datetime import (
datetime,
time,
)
from functools import partial
import os
from urllib.error import URLError
from zipfile import BadZipFile
import numpy as np
import pytest
import pandas.util._test_decorators as td
import pandas as pd
from pandas import (
DataFrame,
Index,
MultiIndex,
S... | bsd-3-clause |
merenlab/anvio | anvio/db.py | 1 | 39504 | # -*- coding: utf-8
# pylint: disable=line-too-long
"""
Low-level db operations.
"""
import os
import time
import math
import numpy
import pandas as pd
import sqlite3
import warnings
import anvio
import anvio.tables as tables
import anvio.terminal as terminal
import anvio.filesnpaths as filesnpaths
from anvio.er... | gpl-3.0 |
GuessWhoSamFoo/pandas | pandas/core/arrays/datetimelike.py | 1 | 54430 | # -*- coding: utf-8 -*-
from datetime import datetime, timedelta
import operator
import warnings
import numpy as np
from pandas._libs import NaT, algos, iNaT, lib
from pandas._libs.tslibs.period import (
DIFFERENT_FREQ, IncompatibleFrequency, Period)
from pandas._libs.tslibs.timedeltas import Timedelta, delta_to_... | bsd-3-clause |
zhreshold/mxnet | python/mxnet/ndarray/numpy/_op.py | 1 | 320283 | # pylint: disable=C0302
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under the Apache License, Version 2.0 (the
# "... | apache-2.0 |
srio/exex | exex.py | 1 | 31257 | import numpy
"""
exex : EXafs EXtraction
python routines to extract the EXAFS signal ( chi(k) ) from the absorption
spectrum ( mu(E) )
dependencies: numpy (matplotlib may be used for plotting, but not required)
MODIFICATION HISTORY:
20141204 srio@esrf.eu, written
"""
__auth... | mit |
robottwo/pyjstat | pyjstat/pyjstat.py | 1 | 30046 | # -*- coding: utf-8 -*-
"""pyjstat is a python module for JSON-stat formatted data manipulation.
This module allows reading and writing JSON-stat [1]_ format with python,
using data frame structures provided by the widely accepted
pandas library [2]_. The JSON-stat format is a simple lightweight JSON format
for data d... | apache-2.0 |
kyleabeauchamp/pymbar | examples/alchemical-free-energy/alchemical_analysis.py | 1 | 54842 | #!/bin/env python
# Originally written by Michael Shirts as:
# Example illustrating the use of MBAR for computing the hydration free energy of OPLS 3-methylindole
# in TIP3P water through alchemical free energy simulations.
# Adapted by P. Klimovich and D. Mobley, March 2011, to be slightly more general.
# Additional... | lgpl-2.1 |
d33tah/pgcli | pgcli/packages/tabulate.py | 1 | 38007 | # -*- coding: utf-8 -*-
"""Pretty-print tabular data."""
from __future__ import print_function
from __future__ import unicode_literals
from collections import namedtuple
from decimal import Decimal
from platform import python_version_tuple
from wcwidth import wcswidth
import re
if python_version_tuple()[0] < "3":
... | bsd-3-clause |
NeuroML/pyNeuroML | pyneuroml/pynml.py | 1 | 64862 | #!/usr/bin/env python
"""
Python wrapper around jnml command.
Also a number of helper functions for
handling/generating/running LEMS/NeuroML2 files
Thanks to Werner van Geit for an initial version of a python wrapper for jnml.
"""
from __future__ import absolute_import
from __future__ import print_function
from __f... | lgpl-3.0 |
chrsrds/scikit-learn | sklearn/model_selection/tests/test_search.py | 1 | 68848 | """Test the search module"""
from collections.abc import Iterable, Sized
from io import StringIO
from itertools import chain, product
import pickle
import sys
from types import GeneratorType
import re
import numpy as np
import scipy.sparse as sp
import pytest
from sklearn.utils.fixes import sp_version
from sklearn.u... | bsd-3-clause |
xhqu1981/pymatgen | pymatgen/phasediagram/plotter.py | 2 | 30521 | # coding: utf-8
# Copyright (c) Pymatgen Development Team.
# Distributed under the terms of the MIT License.
from __future__ import division, unicode_literals
"""
This module provides classes for plotting PhaseDiagram objects.
"""
from six.moves import zip
__author__ = "Shyue Ping Ong"
__copyright__ = "Copyright 20... | mit |
rfinn/LCS | python/LCSsimulate-infall-paper2.py | 1 | 37814 | #!/usr/bin/env python
'''
GOAL:
- test several models that describe how disks shrink and integrated SFR decreases as a result of outside-in quenching
USAGE
- from within ipython
%run ~/Dropbox/pythonCode/LCSsimulate-infall.py
t = run_sim(tmax=0,drdt_step=0.05,nrandom=1000)
t = run_sim(tmax=1,drdt_step=0.05,nrandom... | gpl-3.0 |
thorwhalen/ut | dacc/mong/util.py | 1 | 30043 | __author__ = 'thor'
import pymongo as mg
from pymongo import MongoClient
from pymongo.errors import CursorNotFound
import os
import re
import pandas as pd
from numpy import inf, random, int64, int32, ndarray, float64, float32
import subprocess
from datetime import datetime
from pymongo.collection import Collection
fr... | mit |
biocore/american-gut-web | amgut/lib/locale_data/english_gut.py | 1 | 135828 | #!/usr/bin/env python
# -*- coding: utf-8 -*-
from __future__ import division
from amgut.lib.config_manager import AMGUT_CONFIG
# -----------------------------------------------------------------------------
# Copyright (c) 2014--, The American Gut Project Development Team.
#
# Distributed under the terms of the BSD 3... | bsd-3-clause |
esdalmaijer/webcam-eyetracker | PyOpenCV/pygazetracker/generic.py | 1 | 39634 | # -*- coding: utf-8 -*-
from __init__ import _message, _DEBUG, _DEBUGDIR, _EYECASCADE, _FACECASCADE
import time
from threading import Thread
from multiprocessing import cpu_count, Event, Lock, Process, Queue
import cv2
import numpy
from scipy import ndimage
# # # # #
# DEBUG MODE
# In DEBUG mode, create a Matplotli... | gpl-3.0 |
dmitriz/zipline | zipline/algorithm.py | 1 | 53698 | #
# Copyright 2014 Quantopian, Inc.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in wr... | apache-2.0 |
mikehankey/fireball_camera | diff-stacks.py | 1 | 50578 | #!/usr/bin/python3
# next steps. save off a cache of the diffs,so we can save time on multiple re-runs.
# do a crop cnt confirm.
# script to make master stacks per night and hour from the 1 minute stacks
from matplotlib.backends.backend_agg import FigureCanvasAgg as FigureCanvas
from matplotlib.figure import Figur... | gpl-3.0 |
NicoRahm/CGvsPhoto | CGvsPhoto/model.py | 1 | 57552 | """
The ``model`` module
======================
Contains the class Model which implements the core model for CG detection,
training, testing and visualization functions.
"""
import os
import time
import random
from . import image_loader as il
import tensorflow as tf
import matplotlib.pyplot as plt
... | mit |
xuewei4d/scikit-learn | sklearn/linear_model/tests/test_coordinate_descent.py | 4 | 46426 | # Authors: Olivier Grisel <olivier.grisel@ensta.org>
# Alexandre Gramfort <alexandre.gramfort@inria.fr>
# License: BSD 3 clause
import numpy as np
import pytest
from scipy import interpolate, sparse
from copy import deepcopy
import joblib
from sklearn.base import is_classifier
from sklearn.datasets import lo... | bsd-3-clause |
abigailStev/stingray | stingray/lightcurve.py | 1 | 47691 | """
Definition of :class::class:`Lightcurve`.
:class::class:`Lightcurve` is used to create light curves out of photon counting data
or to save existing light curves in a class that's easy to use.
"""
from __future__ import division, print_function
import logging
import numpy as np
import stingray.io as io
import sting... | mit |
pscholz/presto | lib/python/sifting.py | 1 | 56126 | #!/usr/bin/env python
import sys
import re
import os
import copy
import warnings
import numpy as Num
import matplotlib
import matplotlib.pyplot as plt
from presto import candidate_sigma
# Note: the following are global variables that can
# (and should) be set in whatever module
# imports this file. The ... | gpl-2.0 |
hoelsner/product-database | app/productdb/tests/test_productdb_excel_import.py | 1 | 50968 | """
Test suite for the productdb.excel_import module
"""
import os
import pandas as pd
import pytest
import datetime
from django.contrib.auth.models import User
from app.productdb.excel_import import ProductsExcelImporter, InvalidImportFormatException, InvalidExcelFileFormat, \
ProductMigrationsExcelImporter
from a... | mit |
bensondaled/pyfluo | pyfluo/data.py | 1 | 62157 | import os, h5py, warnings, sys, re,json
import numpy as np, pandas as pd
import matplotlib.pyplot as pl
from skimage.morphology import erosion, dilation
from skimage.filters import gaussian
from skimage.exposure import equalize_adapthist
from scipy.ndimage import label
from .movies import Movie, play_mov
from .series ... | bsd-2-clause |
biorack/metatlas | metatlas/datastructures/metatlas_dataset.py | 1 | 37801 | """ object oriented interface to metatlas_dataset """
import datetime
import getpass
import glob
import logging
import multiprocessing
import numbers
import os
import shutil
import sys
import tarfile
import humanize
import pandas as pd
import tqdm
from metatlas.datastructures import metatlas_objects as metob
from met... | bsd-3-clause |
zlykan/my_test | my_1.py | 1 | 38838 | import pandas as pd
import numpy as np
import csv as csv
#################### train_df
df = pd.read_csv('train.csv', header=0)
print ' '
print 'check "NaN" in each column'
for i in range(df.shape[1]):
t=len(df[df.iloc[:,i].isnull()] ... | gpl-3.0 |
tedmeeds/tcga_encoder | tcga_encoder/analyses/biclustering/models.py | 1 | 101361 | from bic_math import PitmanYor, LOG2PI, LogSum, LogRnd, Gammaln, slice_sample, LogPartition, LogSumWeave
from matplotlib.mlab import find
#from Graphviz.Dotty import *
# from scipy import weave
LOGMIN = -743.746924741
from numpy import *
from pylab import hist, matshow, cm, hlines, legend,vlines, show, draw, axis, fi... | mit |
3324fr/spinalcordtoolbox | scripts/msct_qc.py | 1 | 31047 | #!/usr/bin/env python
#########################################################################################
#
# Qc class implementation
#
#
# ---------------------------------------------------------------------------------------
# Copyright (c) 2015 Polytechnique Montreal <www.neuro.polymtl.ca>
# Authors: Frederic... | mit |
TESScience/SPyFFI | CCD.py | 1 | 48799 | """Tools to generate simulated TESS images."""
import numpy as np
import zachopy.utils
import astropy.io.fits
import scipy.ndimage.measurements
import os
import matplotlib.pylab as plt
import matplotlib.gridspec as gridspec
import Cosmics
import Stamper
import logging
from settings import log_file_handler
logger = log... | mit |
CompPhysics/MachineLearning | doc/Programs/ProjectsData/pulsars (1).py | 1 | 61275 |
# coding: utf-8
# # Machine Learning Project 2: Pulsar Classification via Machine Learning using the HTRU2 Dataset
#
#
# **Hoa Dinh, Jose Pablo Linarés Fernández, and Benedict Castro**\
# Erasmus Mundus Joint Master Degree in Nuclear Physics\
# Université de Caen Normandie
#
# Date: **Feb 20, 2020**
# ## <center>... | cc0-1.0 |
datapythonista/pandas | pandas/core/arrays/period.py | 1 | 36687 | from __future__ import annotations
from datetime import timedelta
import operator
from typing import (
TYPE_CHECKING,
Any,
Callable,
Sequence,
)
import numpy as np
from pandas._libs.arrays import NDArrayBacked
from pandas._libs.tslibs import (
BaseOffset,
NaT,
NaTType,
Timedelta,
... | bsd-3-clause |
DOV-Vlaanderen/pydov | tests/test_util_location_gmlfilter.py | 1 | 38193 | """Module grouping tests for the pydov.util.location.GmlFilter class."""
import pytest
import platform
import subprocess
from owslib.etree import etree
from owslib.fes import And, Or
from pydov.util.location import (Box, Disjoint, GeometryFilter,
GeopandasFilter, GmlFilter, Within,
... | mit |
rvanharen/SitC | UHI_reference.py | 1 | 32248 | #!/usr/bin/env python2
'''
Description:
Author: Ronald van Haren, NLeSC (r.vanharen@esciencecenter.nl)
Created: -
Last Modified: -
License: Apache 2.0
Notes: -
'''
import zipfile
import csv
import StringIO
from combine_wunderground_data import fitem
from numpy import vstack
from numpy ... | apache-2.0 |
bdh1011/wau | venv/lib/python2.7/site-packages/pandas/tests/test_frame.py | 1 | 580875 | # -*- coding: utf-8 -*-
from __future__ import print_function
# pylint: disable-msg=W0612,E1101
from copy import deepcopy
from datetime import datetime, timedelta, time
import sys
import operator
import re
import csv
import nose
import functools
import itertools
from itertools import product, permutations
from distuti... | mit |
kushalbhola/MyStuff | Practice/PythonApplication/env/Lib/site-packages/numpy/lib/function_base.py | 1 | 156286 | from __future__ import division, absolute_import, print_function
try:
# Accessing collections abstract classes from collections
# has been deprecated since Python 3.3
import collections.abc as collections_abc
except ImportError:
import collections as collections_abc
import functools
import re
import sy... | apache-2.0 |
davidwaroquiers/pymatgen | pymatgen/analysis/phase_diagram.py | 1 | 117885 | # coding: utf-8
# Copyright (c) Pymatgen Development Team.
# Distributed under the terms of the MIT License.
"""
This module defines tools to generate and analyze phase diagrams.
"""
import collections
import itertools
import json
import logging
import math
import os
import re
from functools import lru_cache
import ... | mit |
mlperf/training_results_v0.5 | v0.5.0/nvidia/submission/code/single_stage_detector/pytorch/utils.py | 1 | 32153 | # MIT License
#
# Copyright (c) 2018 kuangliu
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitation the rights
# to use, copy, modify, merge, pub... | apache-2.0 |
gammasky/cta-dc | sky_model_checks/source_distib_check.py | 1 | 30557 | """
Plot some simple source parameter distributions
to illustrate / check the CTA 1DC GPS sky model.
"""
import logging
from collections import OrderedDict
import numpy as np
from scipy.ndimage import gaussian_filter1d
import matplotlib
matplotlib.use('agg')
import matplotlib.pyplot as plt
from astropy.table import Ta... | bsd-3-clause |
Laurae2/LightGBM | python-package/lightgbm/basic.py | 1 | 77273 | # coding: utf-8
# pylint: disable = invalid-name, C0111, C0301
# pylint: disable = R0912, R0913, R0914, W0105, W0201, W0212
"""Wrapper c_api of LightGBM"""
from __future__ import absolute_import
import copy
import ctypes
import os
import warnings
from tempfile import NamedTemporaryFile
import numpy as np
import scipy... | mit |
aflaxman/scikit-learn | sklearn/ensemble/gradient_boosting.py | 2 | 81339 | """Gradient Boosted Regression Trees
This module contains methods for fitting gradient boosted regression trees for
both classification and regression.
The module structure is the following:
- The ``BaseGradientBoosting`` base class implements a common ``fit`` method
for all the estimators in the module. Regressio... | bsd-3-clause |
majetideepak/arrow | python/pyarrow/tests/test_convert_builtin.py | 1 | 37623 | # -*- coding: utf-8 -*-
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under the Apache License, Version 2.0 (the
# "... | apache-2.0 |
jonycgn/scipy | scipy/stats/morestats.py | 1 | 82932 | # Author: Travis Oliphant, 2002
#
# Further updates and enhancements by many SciPy developers.
#
from __future__ import division, print_function, absolute_import
import math
import warnings
from collections import namedtuple
import numpy as np
from numpy import (isscalar, r_, log, sum, around, unique, asarray,
... | bsd-3-clause |
matmodlab/matmodlab2 | matmodlab2/core/matmodlab.py | 1 | 40637 | from __future__ import print_function
import os
import time
import numpy as np
from copy import deepcopy as copy
from collections import OrderedDict
from .tensor import VOIGT, I9, inv, dot
from .environ import environ
from .tensor import array_rep, unrotate, rotate
from .material import Material
from .misc import is_s... | bsd-3-clause |
evanbiederstedt/kplr | kplr/api.py | 1 | 30897 | #!/usr/bin/env python
# -*- coding: utf-8 -*-
from __future__ import (division, print_function, absolute_import,
unicode_literals)
__all__ = ["API", "KOI", "Planet", "Star", "LightCurve", "TargetPixelFile"]
import os
import re
import json
import shutil
import logging
from itertools import pro... | mit |
gfyoung/scipy | scipy/signal/fir_filter_design.py | 3 | 41877 | # -*- coding: utf-8 -*-
"""Functions for FIR filter design."""
from __future__ import division, print_function, absolute_import
from math import ceil, log
import warnings
import numpy as np
from numpy.fft import irfft, fft, ifft
from scipy.special import sinc
from scipy.linalg import toeplitz, hankel, pinv
from scipy... | bsd-3-clause |
dsm054/pandas | pandas/tests/io/json/test_pandas.py | 1 | 50373 | # -*- coding: utf-8 -*-
# pylint: disable-msg=W0612,E1101
import pytest
from pandas.compat import (range, lrange, StringIO,
OrderedDict, is_platform_32bit)
import os
import numpy as np
from pandas import (Series, DataFrame, DatetimeIndex, Timestamp,
read_json, compat)
from... | bsd-3-clause |
cchwala/pySNMPdaq | pySNMPdaq.py | 1 | 36578 | # -*- coding: utf-8 -*-
"""
Created on Thu Feb 20 13:16:15 2014
@author: chwala-c
"""
import netsnmp
import signal
import logging
import errno
import shutil
import os
import gzip
from os import getpid, makedirs, path
from multiprocessing import Event, Process, Queue, Pool
from datetime import datetime
from time impo... | bsd-3-clause |
seckcoder/lang-learn | python/sklearn/sklearn/linear_model/least_angle.py | 1 | 43333 | """
Least Angle Regression algorithm. See the documentation on the
Generalized Linear Model for a complete discussion.
"""
# Author: Fabian Pedregosa <fabian.pedregosa@inria.fr>
# Alexandre Gramfort <alexandre.gramfort@inria.fr>
# Gael Varoquaux
#
# License: BSD Style.
from math import log
import sys
... | unlicense |
webmasterraj/GaSiProMo | flask/lib/python2.7/site-packages/pandas/tseries/tests/test_resample.py | 2 | 62178 | # pylint: disable=E1101
from datetime import datetime, timedelta
from functools import partial
from pandas.compat import range, lrange, zip, product
import numpy as np
from pandas import (Series, TimeSeries, DataFrame, Panel, Index,
isnull, notnull, Timestamp)
from pandas.tseries.index import da... | gpl-2.0 |
NixaSoftware/CVis | venv/lib/python2.7/site-packages/pandas/io/formats/format.py | 1 | 90130 | # -*- coding: utf-8 -*-
"""
Internal module for formatting output data in csv, html,
and latex files. This module also applies to display formatting.
"""
from __future__ import print_function
from distutils.version import LooseVersion
# pylint: disable=W0141
from textwrap import dedent
from pandas.core.dtypes.missin... | apache-2.0 |
liyu1990/sklearn | sklearn/linear_model/tests/test_logistic.py | 3 | 39136 | import numpy as np
import scipy.sparse as sp
from scipy import linalg, optimize, sparse
import scipy
from sklearn.utils.testing import assert_almost_equal
from sklearn.utils.testing import assert_array_equal
from sklearn.utils.testing import assert_array_almost_equal
from sklearn.utils.testing import assert_equal
from... | bsd-3-clause |
magic2du/contact_matrix | Contact_maps/mnist_psuedo_ipython_dl_ppi/code/DL_Stacked_Model_Mnist_Psuedo_05_20_2015.py | 1 | 39571 |
# coding: utf-8
# In[1]:
# this part imports libs and load data from csv file
import sys
sys.path.append('../../../libs/')
import csv
from dateutil import parser
from datetime import timedelta
from sklearn import svm
import numpy as np
#import pandas as pd
import pickle
from sklearn.cross_validation import train_tes... | gpl-2.0 |
jiangxb1987/spark | python/pyspark/ml/clustering.py | 1 | 59016 | #
# Licensed to the Apache Software Foundation (ASF) under one or more
# contributor license agreements. See the NOTICE file distributed with
# this work for additional information regarding copyright ownership.
# The ASF licenses this file to You under the Apache License, Version 2.0
# (the "License"); you may not us... | apache-2.0 |
rustychris/stomel | src/paver.py | 1 | 246155 | import sys, os
sys.path.append( os.path.join(os.environ['HOME'],'python'))
from numpy import *
from safe_pylab import *
from matplotlib.collections import *
from matplotlib.patches import Circle
from collections import Iterable
from shapely import geometry as geo
from shapely import wkb
from plot_wkb import *
try:
... | gpl-2.0 |
zverevalexei/trex-http-proxy | trex_client/external_libs/scapy-2.3.1/python3/scapy/utils.py | 1 | 31245 | ## This file is part of Scapy
## See http://www.secdev.org/projects/scapy for more informations
## Copyright (C) Philippe Biondi <phil@secdev.org>
## This program is published under a GPLv2 license
"""
General utility functions.
"""
import os,sys,socket,types
import random,time
import gzip,zlib
import re,struct,array... | mit |
anugrah-saxena/pycroscopy | pycroscopy/processing/image_processing.py | 1 | 53543 | """
Created on Jun 16, 2016
@author: Chris Smith -- csmith55@utk.edu
"""
from __future__ import division, print_function, absolute_import
import os
from multiprocessing import cpu_count
from warnings import warn
import matplotlib.pyplot as plt
import numpy as np
from scipy.optimize import leastsq
from scipy.signal im... | mit |
kekraft/golden_eye | src/pong_system/scripts/pong_system.py | 1 | 32887 | #!/usr/bin/env python
import roslib; roslib.load_manifest('pong_system')
import rospy
from cv_bridge import CvBridge, CvBridgeError
import numpy as np
import cv2
import time
from matplotlib import pyplot as plt
import copy
import sys
import time
# from Tkinter import *
import Tkinter as tk
import Image as PilImage
i... | bsd-2-clause |
treycausey/scikit-learn | sklearn/linear_model/tests/test_sgd.py | 1 | 30633 | import pickle
import unittest
import numpy as np
import scipy.sparse as sp
from sklearn.utils.testing import assert_array_equal
from sklearn.utils.testing import assert_almost_equal
from sklearn.utils.testing import assert_array_almost_equal
from sklearn.utils.testing import assert_greater
from sklearn.utils.testing ... | bsd-3-clause |
cpcloud/seaborn | seaborn/linearmodels.py | 1 | 59198 | """Plotting functions for linear models (broadly construed)."""
from __future__ import division
import copy
import itertools
import warnings
import numpy as np
import pandas as pd
from scipy.spatial import distance
import matplotlib as mpl
import matplotlib.pyplot as plt
try:
import statsmodels.api as sm
impor... | bsd-3-clause |
schae234/cob | cob/server.py | 1 | 33713 | #!/usr/bin/python3
import re
import os
import copy
import time
import yaml
import logging
import numpy as np
import pandas as pd
import camoco as co
import networkx as nx
from math import isinf
from itertools import chain
from flask import Flask, url_for, jsonify, request, send_from_directory, abort
print('Loading Ca... | mit |
neherlab/treetime | treetime/wrappers.py | 1 | 45306 | from __future__ import print_function, division, absolute_import
import os, shutil, sys
import numpy as np
import pandas as pd
from textwrap import fill
from Bio.SeqRecord import SeqRecord
from Bio.Seq import Seq
from Bio.Align import MultipleSeqAlignment
from Bio import Phylo, AlignIO
from Bio import __version__ as bi... | mit |
yutiansut/QUANTAXIS | QUANTAXIS_Test/QAData_Test/data_fq_test.py | 2 | 45432 | import unittest
import sys
import os
import struct
import sqlite3
import pprint;
import QUANTAXIS as QA
import QUANTAXIS.QAUtil.QADate as QAUtilDate
from QUANTAXIS.QASU.save_tushare import (QA_SU_save_stock_info_tushare ,QA_SU_save_stock_terminated)
from QUANTAXIS.QAFetch.QAQuery import (QA_fetch_stock_basic_info_tu... | mit |
Nikea/nsls2_gui | nsls2_gui/dpc_gui.py | 1 | 38302 | from __future__ import print_function
import os
import sys
import multiprocessing as mp
import time
from PyQt4 import (QtCore, QtGui)
from PyQt4.QtCore import Qt
import matplotlib.cm as cm
import Image
import PIL
import scipy
from scipy.misc import imsave
import numpy as np
import matplotlib as mpl
from matplotlib.ba... | bsd-3-clause |
13anjou/Research-Internship | Analysis/dico.py | 1 | 31976 | #!/usr/bin/env python
#-*- coding: utf-8 -*-
import csv
from pylab import*
from scipy import stats
import numpy
import math
import matplotlib.pyplot as plt
import numbers
from regression import correl
from allTest import k, s
def main() :
dicoEchant = corres()
dicoTotal = dict()
#On va importer toutes les donn... | gpl-2.0 |
AutonomyLab/deep_intent | code/autoencoder_model/scripts/thesis_scripts/baseline_classifier.py | 1 | 46812 | from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
from matplotlib.pyplot import axes
import hickle as hkl
import numpy as np
np.random.seed(2 ** 10)
import tensorflow as tf
from keras import backend as K
K.set_image_dim_ordering('tf')
from keras import regul... | bsd-3-clause |
zasdfgbnm/tensorflow | tensorflow/contrib/losses/python/metric_learning/metric_loss_ops.py | 1 | 40521 | # Copyright 2017 The TensorFlow Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applica... | apache-2.0 |
yaukwankiu/armor | analysis.py | 1 | 34740 | # armor/analysis.py
#
# the basic entry point / user front module of the package armor
# 16-3-2013
"""
== USE ==
e.g. for installation on usb drive "KINGSTON":
cd /media/KINGSTON/ARMOR/2013/python
python
from armor import pattern
from armor import analysis
dbz = pattern.DBZ
a = dbz('20120612.0200')
b = dbz('2012061... | cc0-1.0 |
UDST/pandana | pandana/network.py | 1 | 31374 | from __future__ import division, print_function
import numpy as np
import pandas as pd
from sklearn.neighbors import KDTree
from .cyaccess import cyaccess
from .loaders import pandash5 as ph5
import warnings
def reserve_num_graphs(num):
"""
This function was previously used to reserve memory space for multi... | agpl-3.0 |
clslabMSU/clustGUI | gui.py | 1 | 39396 | import sys
from PyQt5 import QtWidgets, QtCore
from PyQt5.QtWidgets import QMainWindow , QTableWidgetItem, QAction, QApplication, QMdiArea,QListWidgetItem, QListWidget, QPushButton, QHBoxLayout, QVBoxLayout, QWidget, QTableWidget,QCheckBox,QLineEdit
from PyQt5.QtGui import QIcon
import numpy as np
import csv
f... | apache-2.0 |
crpurcell/friendlyVRI | Imports/util_tk.py | 1 | 39238 | #!/usr/bin/env python
#=============================================================================#
# #
# NAME: util_tk.py #
# ... | mit |
MJuddBooth/pandas | pandas/tests/sparse/frame/test_frame.py | 1 | 55837 | # pylint: disable-msg=E1101,W0612
import operator
import numpy as np
from numpy import nan
import pytest
from pandas._libs.sparse import BlockIndex, IntIndex
from pandas.compat import PY2, lrange
from pandas.errors import PerformanceWarning
import pandas as pd
from pandas import DataFrame, Panel, Series, bdate_rang... | bsd-3-clause |
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