repo_name string | path string | copies string | size string | content string | license string |
|---|---|---|---|---|---|
magne-max/zipline-ja | tests/test_perf_tracking.py | 1 | 75650 | #
# Copyright 2016 Quantopian, Inc.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in wr... | apache-2.0 |
fedspendingtransparency/data-act-broker-backend | tests/integration/error_warning_file_tests.py | 1 | 62673 | import os
import csv
import logging
import itertools
import pandas as pd
import psutil as ps
from _pytest.monkeypatch import MonkeyPatch
from dataactcore.interfaces.db import GlobalDB
from dataactcore.config import CONFIG_SERVICES
from dataactcore.models.domainModels import concat_tas_dict
from dataactcore.models.look... | cc0-1.0 |
dssg/wikienergy | disaggregator/build/pandas/pandas/tests/test_series.py | 1 | 225511 | # coding=utf-8
# pylint: disable-msg=E1101,W0612
import sys
from datetime import datetime, timedelta
import operator
import string
from inspect import getargspec
from itertools import product, starmap
from distutils.version import LooseVersion
import nose
from numpy import nan
import numpy as np
import numpy.ma as m... | mit |
merenlab/anvio | anvio/summarizer.py | 1 | 90186 | # coding: utf-8
# pylint: disable=line-too-long
"""Summarizes information for a collection.
It also gives access to bin data that may be useful. For instance, did you know
could totally do this to access to gene coverage and detection dicts for a given
bin in a given collection:
import anvio.summarizer as summarizer
... | gpl-3.0 |
jhaux/tensorflow | tensorflow/python/estimator/canned/linear_testing_utils.py | 1 | 52908 | # Copyright 2017 The TensorFlow Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applica... | apache-2.0 |
buguen/pylayers | pylayers/antprop/channel.py | 1 | 153051 | # -*t coding:Utf-8 -*-
r"""
.. currentmodule:: pylayers.antprop.channel
.. autosummary::
:toctree: generated/
TBchannel class
===============
.. autosummary::
:toctree: generated/
TBchannel.tau_Emax
TBchannel.tau_moy
TBchannel.tau_rms
TBchannel.delays
TBchannel.toFD
TBchannel.SalehVa... | lgpl-3.0 |
xuewei4d/scikit-learn | sklearn/neighbors/tests/test_neighbors.py | 4 | 68105 | from itertools import product
import pytest
import numpy as np
from scipy.sparse import (bsr_matrix, coo_matrix, csc_matrix, csr_matrix,
dok_matrix, lil_matrix, issparse)
from sklearn import metrics
from sklearn import neighbors, datasets
from sklearn.base import clone
from sklearn.exception... | bsd-3-clause |
jboes/CatKit | catkit/gen/adsorption.py | 1 | 31960 | from . import defaults
from . import utils
from . import symmetry
import catkit
import matplotlib.pyplot as plt
import itertools
import networkx as nx
import numpy as np
import scipy
radii = defaults.get('radii')
class AdsorptionSites():
"""Adsorption site object."""
def __init__(self, slab, surface_atoms=No... | gpl-3.0 |
ritviksahajpal/LUH2 | LUH2/GLM/plot.py | 1 | 33112 | import os
import click
import logging
import palettable
import subprocess
import pdb
import math
from jenks import jenks # pip install -e "git+https://github.com/perrygeo/jenks.git#egg=jenks"
import sys
from jenks import jenks
import numpy as np
import matplotlib as mpl
from matplotlib import pyplot as plt
import mat... | mit |
mcocdawc/chemcoord | src/chemcoord/cartesian_coordinates/_cartesian_class_get_zmat.py | 1 | 31781 | # -*- coding: utf-8 -*-
from __future__ import (absolute_import, division, print_function,
unicode_literals, with_statement)
import warnings
from collections import OrderedDict
from functools import partial
from itertools import permutations
import numpy as np
import pandas as pd
import chemc... | lgpl-3.0 |
vortex-ape/scikit-learn | sklearn/metrics/tests/test_ranking.py | 4 | 46480 | from __future__ import division, print_function
import pytest
import numpy as np
import warnings
from scipy.sparse import csr_matrix
from sklearn import datasets
from sklearn import svm
from sklearn.datasets import make_multilabel_classification
from sklearn.random_projection import sparse_random_matrix
from sklearn... | bsd-3-clause |
Warvito/pydeeplearn | code/lib/deepbelief.py | 1 | 38804 | import numpy as np
import restrictedBoltzmannMachine as rbm
from batchtrainer import *
from activationfunctions import *
from common import *
from debug import *
from trainingoptions import *
import theano
from theano import tensor as T
from theano.tensor.shared_randomstreams import RandomStreams
theanoFloat = thea... | bsd-3-clause |
JDReutt/BayesDB | bayesdb/tests/experiments/experiment_utils.py | 2 | 31783 | #
# Copyright (c) 2010-2014, MIT Probabilistic Computing Project
#
# Lead Developers: Jay Baxter and Dan Lovell
# Authors: Jay Baxter, Dan Lovell, Baxter Eaves, Vikash Mansinghka
# Research Leads: Vikash Mansinghka, Patrick Shafto
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may... | apache-2.0 |
OLAPLINE/TM1py | TM1py/Services/CellService.py | 1 | 46900 | # -*- coding: utf-8 -*-
import functools
import json
import warnings
from collections import OrderedDict
from io import StringIO
import pandas as pd
from TM1py.Services import ObjectService
from TM1py.Utils import Utils, CaseAndSpaceInsensitiveSet
from TM1py.Utils.Utils import build_pandas_dataframe_from_cellset, di... | mit |
geopandas/geopandas | geopandas/array.py | 1 | 43188 | from collections.abc import Iterable
import numbers
import operator
import warnings
import inspect
import numpy as np
import pandas as pd
from pandas.api.extensions import (
ExtensionArray,
ExtensionDtype,
register_extension_dtype,
)
import shapely
import shapely.affinity
import shapely.geometry
from shap... | bsd-3-clause |
ContinuumIO/dask | dask/dataframe/utils.py | 1 | 31515 | import math
import numbers
import re
import textwrap
from collections.abc import Iterator, Mapping
import sys
import traceback
from contextlib import contextmanager
import numpy as np
import pandas as pd
from pandas.api.types import (
is_categorical_dtype,
is_scalar,
is_sparse,
is_period_dtype,
is... | bsd-3-clause |
choderalab/assaytools | AssayTools/analysis.py | 1 | 47987 | """
Classes for the analysis of fluorescence assay data.
"""
#=============================================================================================
# IMPORTS
#=============================================================================================
import numpy as np
import pymc
from scipy.misc import lo... | lgpl-2.1 |
remenska/iSDM | iSDM/environment.py | 1 | 50751 |
"""
A module for all environmental layers functionality.
.. moduleauthor:: Daniela Remenska <remenska@gmail.com>
"""
import logging
from enum import Enum
import pprint
from rasterio.warp import calculate_default_transform, RESAMPLING
# from iSDM.species import IUCNSpecies
import numpy as np
from geopandas imp... | apache-2.0 |
jjx02230808/project0223 | sklearn/preprocessing/tests/test_data.py | 1 | 58089 |
# Authors:
#
# Giorgio Patrini
#
# License: BSD 3 clause
import warnings
import numpy as np
import numpy.linalg as la
from scipy import sparse
from distutils.version import LooseVersion
from sklearn.utils import gen_batches
from sklearn.utils.testing import assert_almost_equal
from sklearn.utils.testing im... | bsd-3-clause |
whiskie14142/SolarSystemVoyager | source/SSVG.py | 1 | 60331 | # -*- coding: utf-8 -*-
"""SSVG (Solar System Voyager) (c) 2016-2019 Shushi Uetsuki (whiskie14142)
This program is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option)... | gpl-3.0 |
legacysurvey/pipeline | validationtests/quicksipManera.py | 2 | 50830 | from math import *
import numpy as np
import healpy as hp
import astropy.io.fits as pyfits
import time
import matplotlib.pyplot as plt
from multiprocessing import Pool
from multiprocessing.dummy import Pool as ThreadPool
import numpy.random
import os, errno
import subprocess
twopi = 2.*pi
piover2 = .5*pi
verbose = Fals... | gpl-2.0 |
okiyama/EEA-Opponent-Modeling | Konane/FigMaker.py | 1 | 31462 | ## Figure generator for the data produced by EEA.py.
## Not generic.
##
## Author: Julian Jocque
## Date: 10/13/14
try:
from pylab import *
import matplotlib.lines as mlines
import seaborn as sns
import numpy as np
except:
print "Unable to import things in FigMaker! Probably a pypy issue."
import d... | gpl-2.0 |
bendalab/thunderfish | thunderfish/tabledata.py | 2 | 109053 | """
Provides `class TableData` for tables with a rich hierarchical header
including units and column-specific formats. Kind of similar to a
pandas data frame, but with intuitive numpy-style indexing and nicely
formatted output to csv, html, and latex.
## Helper functions
- `write()`: shortcut for constructing and wr... | gpl-3.0 |
jamestwebber/scipy | scipy/spatial/kdtree.py | 1 | 38455 | # Copyright Anne M. Archibald 2008
# Released under the scipy license
from __future__ import division, print_function, absolute_import
import sys
import numpy as np
from heapq import heappush, heappop
import scipy.sparse
__all__ = ['minkowski_distance_p', 'minkowski_distance',
'distance_matrix',
... | bsd-3-clause |
jmmease/pandas | pandas/tests/frame/test_constructors.py | 1 | 74703 | # -*- coding: utf-8 -*-
from __future__ import print_function
from datetime import datetime, timedelta
import functools
import itertools
import pytest
from numpy.random import randn
import numpy as np
import numpy.ma as ma
import numpy.ma.mrecords as mrecords
from pandas.core.dtypes.common import is_integer_dtype
... | bsd-3-clause |
lioritan/Thesis | problems/alg10_globalfeatures.py | 1 | 41192 | # -*- coding: utf-8 -*-
"""
Created on Thu Feb 05 13:17:18 2015
@author: liorf
"""
from numpy import *
from matplotlib.mlab import find
from scipy.stats import mode, chisquare
import time
from matplotlib.cbook import flatten
def clean_tree_for_pickle(tree_node):
# tree_node.relations=None
if tree_node.chose... | gpl-2.0 |
geoscixyz/em_examples | em_examples/sphereElectrostatic_example.py | 1 | 30873 | from __future__ import print_function
from __future__ import absolute_import
from __future__ import unicode_literals
from scipy.constants import epsilon_0
import matplotlib.pyplot as plt
import matplotlib.colors as colors
import numpy as np
from SimPEG.Utils import ndgrid, mkvc
"""
Authors: Thibaut Astic, Lindsey Hea... | mit |
CooperLuan/airflow | airflow/www/app.py | 1 | 66977 | from __future__ import print_function
from __future__ import division
from builtins import str
from past.utils import old_div
import copy
from datetime import datetime, timedelta
import dateutil.parser
from functools import wraps
import inspect
import json
import logging
import os
import socket
import sys
from flask._... | apache-2.0 |
zutshi/S3CAMR | src/scamr.py | 1 | 33922 | #!/usr/bin/env python
# -*- coding: utf-8 -*-
from __future__ import absolute_import
from __future__ import division
from __future__ import unicode_literals
#import matplotlib
# Force GTK3 backend. By default GTK2 gets loaded and conflicts with
# graph-tool
#matplotlib.use('GTK3Agg')
#global plt
#import matplotlib.py... | bsd-2-clause |
chatcannon/scipy | scipy/stats/_multivariate.py | 3 | 92794 | #
# Author: Joris Vankerschaver 2013
#
from __future__ import division, print_function, absolute_import
import numpy as np
import scipy.linalg
from scipy.misc import doccer
from scipy.special import gammaln, psi, multigammaln
from scipy._lib._util import check_random_state
__all__ = ['multivariate_normal',
... | bsd-3-clause |
CompPhysics/MachineLearning | doc/src/LectureNotes/_build/jupyter_execute/chapter8.py | 1 | 48694 | # Dimensionality Reduction
## Reducing the number of degrees of freedom, overarching view
Many Machine Learning problems involve thousands or even millions of
features for each training instance. Not only does this make training
extremely slow, it can also make it much harder to find a good
solution, as we will see.... | cc0-1.0 |
BiaDarkia/scikit-learn | sklearn/ensemble/tests/test_gradient_boosting.py | 13 | 49898 | """
Testing for the gradient boosting module (sklearn.ensemble.gradient_boosting).
"""
import warnings
import numpy as np
from itertools import product
from scipy.sparse import csr_matrix
from scipy.sparse import csc_matrix
from scipy.sparse import coo_matrix
from sklearn import datasets
from sklearn.base import clo... | bsd-3-clause |
rtrwalker/geotecha | geotecha/inputoutput/inputoutput.py | 1 | 83711 | # geotecha - A software suite for geotechncial engineering
# Copyright (C) 2018 Rohan T. Walker (rtrwalker@gmail.com)
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the L... | gpl-3.0 |
thomasyu888/SynapseChallengeTemplates | python/scoring_harness/challenge.py | 1 | 31982 | #
# Command line tool for scoring and managing Synapse challenges
#
# To use this script, first install the Synapse Python Client
# http://python-docs.synapse.org/
#
# Log in once using your user name and password
# import synapseclient
# syn = synapseclient.Synapse()
# syn.login(<username>, <password>, rememberM... | apache-2.0 |
JasonKessler/scattertext | scattertext/__init__.py | 1 | 98375 | from __future__ import print_function
version = [0, 1, 4]
__version__ = '.'.join([str(e) for e in version])
import re
import numpy as np
import pandas as pd
import warnings
from scattertext.features.UseFullDocAsFeature import UseFullDocAsFeature
from scattertext.features.UseFullDocAsMetadata import UseFullDocAsMetada... | apache-2.0 |
amolkahat/pandas | pandas/tests/indexing/test_loc.py | 1 | 31338 | """ test label based indexing with loc """
import itertools
import pytest
from warnings import catch_warnings, filterwarnings
import numpy as np
import pandas as pd
from pandas.compat import lrange, StringIO
from pandas import Series, DataFrame, Timestamp, date_range, MultiIndex, Index
from pandas.util import testin... | bsd-3-clause |
fishstamp82/moltools | moltools/molecules.py | 1 | 141796 | #!/usr/bin/env python
#-*- coding: utf-8 -*-
"""
The molecules modules serves as an interface to write water molecule input files using predefined geometries, to be used with the DALTON qm package.
"""
__all__ = [ 'Atom', 'Bond', 'Molecule', 'Water', 'Cluster', ]
import re, os, itertools, functools, warnings, subproc... | mit |
who-emro/meerkat_api | api_background/api_background/export_data.py | 1 | 40323 | """
Functions to export data
"""
import gettext
import shelve
import csv
import json
import logging
import xlsxwriter
import os
import yaml
from sqlalchemy.orm import aliased
from sqlalchemy import text, or_, func, Float
from dateutil.parser import parse
from datetime import datetime
from celery import task
import requ... | mit |
anntzer/seaborn | seaborn/tests/test_axisgrid.py | 1 | 51203 | import warnings
import numpy as np
import pandas as pd
from scipy import stats
import matplotlib as mpl
import matplotlib.pyplot as plt
import pytest
import nose.tools as nt
import numpy.testing as npt
from numpy.testing import assert_array_equal
try:
import pandas.testing as tm
except ImportError:
import pan... | bsd-3-clause |
google-research/google-research | tft/libs/tft_model.py | 1 | 44521 | # coding=utf-8
# Copyright 2021 The Google Research Authors.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicab... | apache-2.0 |
CDNoyes/EDL-Py | EntryGuidance/DDP.py | 1 | 30598 | """ Python implementation of differential dynamic programming """
import numpy as np
# from numpy import sin, cos
from pyaudi import sin, cos
from scipy.integrate import odeint
from scipy.interpolate import interp1d
import matplotlib.pyplot as plt
import sys
sys.path.append('./Utils/')
from RK4 import RK4
from trap... | gpl-3.0 |
jradinger/v.fidimo | v.fidimo.py | 1 | 92189 | #!/usr/bin/env python
# -*- coding: utf-8 -*-
############################################################################
#
# MODULE: FIDIMO Fish Dispersal Model for Vector River Networks for GRASS 7
#
# AUTHOR(S): Johannes Radinger
#
# VERSION: V0.0 Beta
#
# DATE: 2016-08-30
#
##################... | gpl-2.0 |
jeffknupp/arrow | python/pyarrow/tests/test_parquet.py | 1 | 33220 | # Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under the Apache License, Version 2.0 (the
# "License"); you may not u... | apache-2.0 |
timothylwarren/py_utilities | fp_library2.py | 1 | 41608 | #!/usr/bin/python
# written by Floris van Breugel, with some help from Andrew Straw and Will Dickson
# dependencies for LaTex rendering: texlive, ghostscript, dvipng, texlive-latex-extra
# general imports
import matplotlib
print(matplotlib.__version__)
#print 'recommended version: 1.1.1 or greater'
import pdb
#######... | gpl-3.0 |
jsilter/scipy | scipy/signal/windows.py | 1 | 48671 | """The suite of window functions."""
from __future__ import division, print_function, absolute_import
import warnings
import numpy as np
from scipy import special, linalg
from scipy.fftpack import fft
from scipy.lib.six import string_types
__all__ = ['boxcar', 'triang', 'parzen', 'bohman', 'blackman', 'nuttall',
... | bsd-3-clause |
maxplanck-ie/HiCExplorer | hicexplorer/hicCorrectMatrix.py | 1 | 31877 | import warnings
import sys
warnings.simplefilter(action="ignore", category=RuntimeWarning)
warnings.simplefilter(action="ignore", category=PendingDeprecationWarning)
import argparse
from past.builtins import zip
from scipy.sparse import lil_matrix
from hicexplorer.iterativeCorrection import iterativeCorrection
from hi... | gpl-2.0 |
DailyActie/Surrogate-Model | 01-codes/scikit-learn-master/sklearn/manifold/t_sne.py | 1 | 34867 | # Author: Alexander Fabisch -- <afabisch@informatik.uni-bremen.de>
# Author: Christopher Moody <chrisemoody@gmail.com>
# Author: Nick Travers <nickt@squareup.com>
# License: BSD 3 clause (C) 2014
# This is the exact and Barnes-Hut t-SNE implementation. There are other
# modifications of the algorithm:
# * Fast Optimi... | mit |
mistercrunch/panoramix | superset/views/core.py | 1 | 113084 | # Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under the Apache License, Version 2.0 (the
# "License"); you may not u... | apache-2.0 |
TomAugspurger/pandas | pandas/core/reshape/merge.py | 1 | 73028 | """
SQL-style merge routines
"""
import copy
import datetime
from functools import partial
import string
from typing import TYPE_CHECKING, Optional, Tuple, Union
import warnings
import numpy as np
from pandas._libs import Timedelta, hashtable as libhashtable, lib
import pandas._libs.join as libjoin
from pandas._typi... | bsd-3-clause |
mikeireland/pynrm | pynrm/pypoise.py | 1 | 68751 | """The main module to implement the Phase Observationally Independent of
Systematic Errors (POISE) algorithm.
"""
from __future__ import division, print_function
import astropy.io.fits as pyfits
import numpy as np
import matplotlib.pyplot as plt
import scipy.optimize as op
import scipy.ndimage as nd
import pdb
import... | mit |
silasb/flatcam | camlib.py | 1 | 82964 | ############################################################
# FlatCAM: 2D Post-processing for Manufacturing #
# http://caram.cl/software/flatcam #
# Author: Juan Pablo Caram (c) #
# Date: 2/5/2014 #
# MIT Licence ... | mit |
ningchi/scikit-learn | sklearn/tests/test_cross_validation.py | 2 | 40182 | """Test the cross_validation module"""
from __future__ import division
import warnings
import numpy as np
from scipy.sparse import coo_matrix
from scipy import stats
from sklearn.utils.testing import assert_true
from sklearn.utils.testing import assert_false
from sklearn.utils.testing import assert_equal
from sklearn... | bsd-3-clause |
DEVELByte/incubator-airflow | airflow/contrib/hooks/bigquery_hook.py | 2 | 35738 | # -*- coding: utf-8 -*-
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
... | apache-2.0 |
KatonaLab/vividstorm | controllers/analyses.py | 1 | 141723 | # -*- coding: utf-8 -*-
"""
Created on: 2015.01.11.
Author: turbo
"""
import os
from util import RunnableComponent
import numpy
import string
import scipy
from scipy import stats
from scipy import spatial
from scipy.spatial import ConvexHull
import matplotlib.pyplot as plt
from mpl_toolkits.mplot3d import Axes3D
imp... | lgpl-3.0 |
yuginboy/from_GULP_to_FEFF | feff/libs/GaMnAs_concentration.py | 1 | 39959 | import sys
import os
from io import StringIO
import inspect
import numpy as np
import matplotlib.gridspec as gridspec
from matplotlib import pylab
import matplotlib.pyplot as plt
import scipy as sp
from scipy.interpolate import interp1d
from scipy.interpolate import Rbf, InterpolatedUnivariateSpline, splrep, splev, spl... | gpl-3.0 |
INM-6/hybridLFPy | examples/Hagen_et_al_2016_cercor/figure_13.py | 2 | 51146 | #!/usr/bin/env python
# -*- coding: utf-8 -*-
from plot_methods import plotting_correlation, network_sketch, plot_population, plot_signal_sum, calc_signal_power, plot_population
from cellsim16popsParams_modified_spontan import multicompartment_params
import analysis_params
import plotting_helpers as phlp
from hybridLFP... | gpl-3.0 |
MJuddBooth/pandas | pandas/core/arrays/timedeltas.py | 1 | 37212 | # -*- coding: utf-8 -*-
from __future__ import division
from datetime import timedelta
import textwrap
import warnings
import numpy as np
from pandas._libs import lib, tslibs
from pandas._libs.tslibs import NaT, Timedelta, Timestamp, iNaT
from pandas._libs.tslibs.fields import get_timedelta_field
from pandas._libs.t... | bsd-3-clause |
CompPhysics/ThesisProjects | doc/MSc/msc_students/former/AudunHansen/Audun/Pythonscripts/CCAlgebra_mk3.py | 1 | 56358 | from numpy import *
from itertools import *
from matplotlib.pyplot import *
from copy import copy
class Combiner():
#Normal ordered operator for cluster algebra (diagrammatic)
def __init__(self, H, T):
self.q_a = H
self.I = []
HN = len(self.q_a)
self.combine(H,... | cc0-1.0 |
geopandas/geopandas | geopandas/geoseries.py | 1 | 40127 | import json
import warnings
import numpy as np
import pandas as pd
from pandas import Series, MultiIndex
from pandas.core.internals import SingleBlockManager
from pyproj import CRS
from shapely.geometry.base import BaseGeometry
from geopandas.base import GeoPandasBase, _delegate_property
from geopandas.plotting impo... | bsd-3-clause |
joannedafna/validation | codes/vsuite/valid_suite.py | 2 | 59806 | __author__ = "joanne cohn"
__email__ = "jcohn@berkeley.edu"
__version__= "1.1" #updated BWC M*(Mh) from newer version of paper
import numpy as N
import matplotlib.pyplot as plt
import matplotlib
import matplotlib.cm as cm
import matplotlib.mlab as mlab
def comments():
"""
Please do email me if you... | mit |
plotly/python-api | packages/python/plotly/plotly/graph_objs/_splom.py | 1 | 60340 | from plotly.basedatatypes import BaseTraceType as _BaseTraceType
import copy as _copy
class Splom(_BaseTraceType):
# class properties
# --------------------
_parent_path_str = ""
_path_str = "splom"
_valid_props = {
"customdata",
"customdatasrc",
"diagonal",
"dimen... | mit |
teonlamont/mne-python | mne/source_estimate.py | 2 | 133598 | # Authors: Alexandre Gramfort <alexandre.gramfort@telecom-paristech.fr>
# Matti Hamalainen <msh@nmr.mgh.harvard.edu>
# Martin Luessi <mluessi@nmr.mgh.harvard.edu>
# Mads Jensen <mje.mads@gmail.com>
#
# License: BSD (3-clause)
import copy
import os.path as op
from math import ceil
import warn... | bsd-3-clause |
bmazin/SDR | DataReadout/ChannelizerControls/templarCustom.py | 1 | 56281 | import sys, os, random, math, array, fractions
from PyQt4.QtCore import *
from PyQt4.QtGui import *
from PyQt4 import QtGui
import socket
import matplotlib, corr, time, struct, numpy
from matplotlib.backends.backend_qt4agg import FigureCanvasQTAgg as FigureCanvas
from matplotlib.backends.backend_qt4agg import Navigatio... | gpl-2.0 |
Caoimhinmg/PmagPy | dialogs/thellier_gui_dialogs.py | 1 | 93630 | #!/usr/bin/env python
#============================================================================================
# LOG HEADER:
#
# Dialogs boxes for thellier_gui.py
#
#============================================================================================
#
# 11/16/2014 add some units to criteria dialogs
#
# ... | bsd-3-clause |
larsmans/numpy | numpy/core/tests/test_multiarray.py | 1 | 182060 | from __future__ import division, absolute_import, print_function
import tempfile
import sys
import os
import shutil
import warnings
import operator
import io
if sys.version_info[0] >= 3:
import builtins
else:
import __builtin__ as builtins
from decimal import Decimal
import numpy as np
from nose import SkipT... | bsd-3-clause |
magic2du/contact_matrix | Contact_maps/DeepLearning/DeepLearningTool/DL_contact_matrix_load2-new10fold_01_26_2015_parallel.py | 1 | 43371 |
# coding: utf-8
# In[3]:
import sys, os
sys.path.append('../../../libs/')
import os.path
import IO_class
from IO_class import FileOperator
from sklearn import cross_validation
import sklearn
import numpy as np
import csv
from dateutil import parser
from datetime import timedelta
from sklearn import svm
import numpy ... | gpl-2.0 |
desihub/desisurvey | py/desisurvey/plots.py | 1 | 37829 | """Utility functions for plotting DESI survey progress and planning.
"""
from __future__ import print_function, division
import datetime
import calendar
import numpy as np
import astropy.table
import astropy.units as u
import desiutil.plots
import desisurvey.ephem
import desisurvey.config
import desisurvey.utils
... | bsd-3-clause |
tensorflow/lattice | tensorflow_lattice/python/estimators_test.py | 1 | 32020 | # Copyright 2019 Google LLC
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, ... | apache-2.0 |
wuxue/altanalyze | AltAnalyze_BACKUP_6888.py | 1 | 569185 | ###AltAnalyze
#Copyright 2005-2008 J. David Gladstone Institutes, San Francisco California
#Author Nathan Salomonis - nsalomonis@gmail.com
#Permission is hereby granted, free of charge, to any person obtaining a copy
#of this software and associated documentation files (the "Software"), to deal
#in the Software with... | apache-2.0 |
sthyme/ZFSchizophrenia | BehaviorAnalysis/setupfishgraphing.py | 1 | 53272 | #!/usr/bin/python
import os,sys,glob,re
import numpy as np
import scipy
import datetime
import time
from datetime import timedelta
from AnalyzedFish import AnalyzedFish # fish object
from scipy import stats
from scipy.stats import norm
from scipy.stats import mstats
import fileloading # prepares all the files
import ... | mit |
pyrocko/pyrocko | src/util.py | 1 | 71610 | # http://pyrocko.org - GPLv3
#
# The Pyrocko Developers, 21st Century
# ---|P------/S----------~Lg----------
'''
Utility functions for Pyrocko.
.. _time-handling-mode:
High precision time handling mode
.................................
Pyrocko can treat timestamps either as standard double precision (64 bit)
floatin... | gpl-3.0 |
iled/gsimcli | GSIMCLI/interface/benchmark.py | 1 | 30930 | # -*- coding: utf-8 -*-
"""
Created on 13/01/2015
@author: julio
"""
from PySide import QtGui, QtCore
import glob2
import os
import sys
from external_libs.pyside_dynamic import loadUi
from external_libs.ui import CheckBoxDelegate
import interface.checktable as ct
import interface.ui_utils as ui
import pandas as pd
im... | gpl-3.0 |
bdh1011/wau | venv/lib/python2.7/site-packages/pandas/io/tests/test_json/test_pandas.py | 1 | 30334 | # pylint: disable-msg=W0612,E1101
from pandas.compat import range, lrange, StringIO, OrderedDict
from pandas import compat
import os
import numpy as np
from pandas import Series, DataFrame, DatetimeIndex, Timestamp, CategoricalIndex
from datetime import timedelta
import pandas as pd
read_json = pd.read_json
from pand... | mit |
datapythonista/pandas | pandas/core/arrays/sparse/array.py | 2 | 54943 | """
SparseArray data structure
"""
from __future__ import annotations
from collections import abc
import numbers
import operator
from typing import (
Any,
Callable,
Sequence,
TypeVar,
)
import warnings
import numpy as np
from pandas._libs import lib
import pandas._libs.sparse as splib
from pandas._li... | bsd-3-clause |
efiring/scipy | scipy/signal/filter_design.py | 2 | 124671 | """Filter design.
"""
from __future__ import division, print_function, absolute_import
import warnings
import numpy
from numpy import (atleast_1d, poly, polyval, roots, real, asarray, allclose,
resize, pi, absolute, logspace, r_, sqrt, tan, log10,
arctan, arcsinh, sin, exp, cosh,... | bsd-3-clause |
nolanliou/tensorflow | tensorflow/contrib/metrics/python/ops/metric_ops.py | 1 | 154395 | # Copyright 2016 The TensorFlow Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applica... | apache-2.0 |
harisbal/pandas | pandas/tests/indexing/test_coercion.py | 1 | 35775 | # -*- coding: utf-8 -*-
import itertools
import numpy as np
import pytest
import pandas.compat as compat
import pandas as pd
import pandas.util.testing as tm
###############################################################
# Index / Series common tests which may trigger dtype coercions
#############################... | bsd-3-clause |
altair-viz/altair | altair/vegalite/v4/tests/test_api.py | 1 | 30782 | """Unit tests for altair API"""
import io
import json
import operator
import os
import pathlib
import tempfile
import jsonschema
import pytest
import pandas as pd
import altair.vegalite.v4 as alt
try:
import altair_saver # noqa: F401
except ImportError:
altair_saver = None
def getargs(*args, **kwargs):
... | bsd-3-clause |
pizzathief/scipy | scipy/interpolate/fitpack2.py | 2 | 66778 | """
fitpack --- curve and surface fitting with splines
fitpack is based on a collection of Fortran routines DIERCKX
by P. Dierckx (see http://www.netlib.org/dierckx/) transformed
to double routines by Pearu Peterson.
"""
# Created by Pearu Peterson, June,August 2003
__all__ = [
'UnivariateSpline',
'Interpolate... | bsd-3-clause |
pacoqueen/ginn | extra/install/ipython2/ipython-5.10.0/IPython/sphinxext/ipython_directive.py | 1 | 42314 | # -*- coding: utf-8 -*-
"""
Sphinx directive to support embedded IPython code.
This directive allows pasting of entire interactive IPython sessions, prompts
and all, and their code will actually get re-executed at doc build time, with
all prompts renumbered sequentially. It also allows you to input code as a pure
pyth... | gpl-2.0 |
tseaver/google-cloud-python | bigquery/tests/unit/test__pandas_helpers.py | 1 | 48653 | # Copyright 2019 Google LLC
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, s... | apache-2.0 |
CSchoel/nolds | nolds/measures.py | 1 | 85723 | # -*- coding: utf-8 -*-
from __future__ import (absolute_import, division,
print_function, unicode_literals)
from builtins import (
bytes, dict, int, list, object, range, str, ascii, chr, hex, input, next,
oct, open, pow, round, super, filter, map, zip
)
import numpy as np
import warnings
im... | mit |
pavel-demin/red-pitaya-notes | projects/vna/client/vna.py | 1 | 34599 | #!/usr/bin/env python3
# Control program for the Red Pitaya vector network analyzer
# Copyright (C) 2021 Pavel Demin
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the L... | mit |
r9y9/librosa | librosa/util/utils.py | 1 | 54495 | #!/usr/bin/env python
# -*- coding: utf-8 -*-
"""Utility functions"""
import scipy.ndimage
import scipy.sparse
import six
import numpy as np
from numpy.lib.stride_tricks import as_strided
from .. import cache
from .exceptions import ParameterError
from numba import jit
# Constrain STFT block sizes to 256 KB
MAX_ME... | isc |
rgommers/statsmodels | statsmodels/genmod/generalized_estimating_equations.py | 1 | 84147 | """
Procedures for fitting marginal regression models to dependent data
using Generalized Estimating Equations.
References
----------
KY Liang and S Zeger. "Longitudinal data analysis using
generalized linear models". Biometrika (1986) 73 (1): 13-22.
S Zeger and KY Liang. "Longitudinal Data Analysis for Discrete and
... | bsd-3-clause |
President3D/Quality-SPC | src/InModel.py | 1 | 54444 | # Copyright 2017 Patrick Kuttruff
#
# -------------------- English --------------------
# This file is part of Quality SPC.
#
# Quality SPC is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of t... | gpl-3.0 |
mbalasso/mynumpy | numpy/lib/npyio.py | 1 | 65499 | __all__ = ['savetxt', 'loadtxt', 'genfromtxt', 'ndfromtxt', 'mafromtxt',
'recfromtxt', 'recfromcsv', 'load', 'loads', 'save', 'savez',
'savez_compressed', 'packbits', 'unpackbits', 'fromregex', 'DataSource']
import numpy as np
import format
import sys
import os
import re
import sys
import itertoo... | bsd-3-clause |
rs2/pandas | pandas/core/strings.py | 1 | 109440 | import codecs
from functools import wraps
import re
import textwrap
from typing import TYPE_CHECKING, Any, Callable, Dict, List, Pattern, Type, Union
import warnings
import numpy as np
import pandas._libs.lib as lib
import pandas._libs.missing as libmissing
import pandas._libs.ops as libops
from pandas._typing import... | bsd-3-clause |
ctoher/pymatgen | pymatgen/io/abinitio/flows.py | 2 | 57614 | # coding: utf-8
"""
A Flow is a container for Works, and works consist of tasks.
Flows are the final objects that can be dumped directly to a pickle file on disk
Flows are executed using abirun (abipy).
"""
from __future__ import unicode_literals, division, print_function
import os
import sys
import time
import collect... | mit |
toobaz/pandas | pandas/tests/reshape/merge/test_merge.py | 1 | 72529 | from collections import OrderedDict
from datetime import date, datetime
import random
import re
import numpy as np
from numpy import nan
import pytest
from pandas.core.dtypes.common import is_categorical_dtype, is_object_dtype
from pandas.core.dtypes.dtypes import CategoricalDtype
import pandas as pd
from pandas imp... | bsd-3-clause |
taxipp/ipp-macro-series-parser | ipp_macro_series_parser/denombrements_fiscaux/agregats_ipp.py | 1 | 36752 |
import collections
import numpy
import pandas
from py_expression_eval import Parser
from ipp_macro_series_parser.config import Config
from ipp_macro_series_parser.denombrements_fiscaux.denombrements_parsers import (
get_denombrements_fiscaux_data_frame)
from ipp_macro_series_parser.data_extraction import get_... | gpl-3.0 |
kevin-intel/scikit-learn | sklearn/cluster/tests/test_hierarchical.py | 3 | 32690 | """
Several basic tests for hierarchical clustering procedures
"""
# Authors: Vincent Michel, 2010, Gael Varoquaux 2012,
# Matteo Visconti di Oleggio Castello 2014
# License: BSD 3 clause
import itertools
from tempfile import mkdtemp
import shutil
import pytest
from functools import partial
import numpy as n... | bsd-3-clause |
Chandra-MARX/marx-test | tests/PSF.py | 1 | 56023 | '''
The `point-spread function (PSF) for Chandra <http://cxc.harvard.edu/ciao/PSFs/psf_central.html>`_ describes how the light from a point source is spread over a larger area on the detector. Several effects contribute to this, e.g. the uncertainty in the pointing, the fact that the detectors are flat, while the focal... | gpl-2.0 |
harisbal/pandas | pandas/util/testing.py | 1 | 101346 | from __future__ import division
from contextlib import contextmanager
from datetime import datetime
from functools import wraps
import locale
import os
import re
import string
import subprocess
import sys
import tempfile
import traceback
import warnings
import numpy as np
from numpy.random import rand, randn
from pa... | bsd-3-clause |
irmen/synthesizer | synthplayer/oscillators.py | 1 | 38071 | """
Oscillators for the Sample waveform synthesizer.
Inspired by FM synthesizers such as the Yamaha DX-7 and TX81Z.
Creates various waveforms with adjustable parameters.
Written by Irmen de Jong (irmen@razorvine.net) - License: GNU LGPL 3.
"""
import itertools
from math import pi, sin, cos, log, fabs, floor, sqrt
imp... | lgpl-3.0 |
toomoresuch/pysonengine | eggs/ipython-0.10.1-py2.6.egg/IPython/Shell.py | 1 | 46259 | # -*- coding: utf-8 -*-
"""IPython Shell classes.
All the matplotlib support code was co-developed with John Hunter,
matplotlib's author.
"""
#*****************************************************************************
# Copyright (C) 2001-2006 Fernando Perez <fperez@colorado.edu>
#
# Distributed under the t... | mit |
DanielWinklehner/dans_pymodules | dans_pymodules/mpl_canvas_wrapper.py | 1 | 39459 | import gi
gi.require_version('Gtk', '3.0') # nopep8
from gi.repository import Gtk, GObject
import matplotlib
from matplotlib.patches import Rectangle
from matplotlib.figure import Figure
from matplotlib.font_manager import FontProperties
from matplotlib.artist import ArtistInspector
from matplotlib.lines import Line2D... | mit |
justinbois/fish-activity | fishact/parse.py | 1 | 39601 | import csv
import datetime
import os
import warnings
try:
import tqdm
except:
pass
import numpy as np
import pandas as pd
import numba
def _sniff_file_info(fname, comment='#', check_header=True, quiet=False):
"""
Infer number of header rows and delimiter of a file.
Parameters
----------
... | mit |
cheehieu/qm-fir-digital-filter-core | ISAAC/qmfir_documentation/jasons_v/iPanel.py | 1 | 40913 | import os
import pprint
import random
import sys
import wx
from wx import py
from demo_ser2 import *
from threading import *
import time
import sys
import serial,time,array, math, datetime
from Numeric import *
ser = serial.Serial('/dev/ttyS0', 57600)
#ser = serial.Serial(port='/dev/ttyUSB0', baudrate=57600)
import ... | gpl-2.0 |
yavalvas/yav_com | build/matplotlib/lib/matplotlib/patches.py | 1 | 142731 | # -*- coding: utf-8 -*-
from __future__ import (absolute_import, division, print_function,
unicode_literals)
import six
from six.moves import map, zip
import math
import matplotlib as mpl
import numpy as np
import matplotlib.cbook as cbook
import matplotlib.artist as artist
from matplotlib.a... | mit |
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