repo_name string | path string | copies string | size string | content string | license string |
|---|---|---|---|---|---|
cosurgi/trunk | doc/sphinx/conf.py | 1 | 31649 | # -*- coding: utf-8 -*-
#
# Yade documentation build configuration file, created by
# sphinx-quickstart on Mon Nov 16 21:49:34 2009.
#
# This file is execfile()d with the current directory set to its containing dir.
#
# Note that not all possible configuration values are present in this
# autogenerated file.
#
# All co... | gpl-2.0 |
bdh1011/wau | venv/lib/python2.7/site-packages/pandas/tests/test_groupby.py | 1 | 204432 | # -*- coding: utf-8 -*-
from __future__ import print_function
import nose
from numpy.testing.decorators import slow
from datetime import datetime
from numpy import nan
from pandas import date_range,bdate_range, Timestamp
from pandas.core.index import Index, MultiIndex, Int64Index, CategoricalIndex
from pandas.core.a... | mit |
cbertinato/pandas | pandas/core/resample.py | 1 | 58052 | import copy
from datetime import timedelta
from textwrap import dedent
from typing import Dict, no_type_check
import warnings
import numpy as np
from pandas._libs import lib
from pandas._libs.tslibs import NaT, Timestamp
from pandas._libs.tslibs.frequencies import is_subperiod, is_superperiod
from pandas._libs.tslibs... | bsd-3-clause |
fidelram/deepTools | deeptools/plotHeatmap.py | 1 | 35330 | #!/usr/bin/env python
# -*- coding: utf-8 -*-
from __future__ import division
import argparse
from collections import OrderedDict
import numpy as np
import matplotlib
matplotlib.use('Agg')
matplotlib.rcParams['pdf.fonttype'] = 42
matplotlib.rcParams['svg.fonttype'] = 'none'
import matplotlib.pyplot as plt
from matplot... | gpl-3.0 |
amillner/pyiat | pyiat/pyiat.py | 1 | 32040 | import pandas as pd
import numpy as np
def iat_get_dscore_each_stim(df,subject,rt,block,condition,stimulus,cond1,cond2,blocks,weighted):
'''
Take all relevant columns and produce a D score for each stimulus (i.e. word).
08-2017
Alexander Millner <alexmillner@gmail.com
'''
idx=pd.IndexSli... | gpl-3.0 |
jld23/saspy | saspy/sasioiom.py | 1 | 59602 | #
# Copyright SAS Institute
#
# Licensed under the Apache License, Version 2.0 (the License);
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing... | apache-2.0 |
runt18/nupic | external/linux32/lib/python2.6/site-packages/matplotlib/_mathtext_data.py | 1 | 57898 | """
font data tables for truetype and afm computer modern fonts
"""
# this dict maps symbol names to fontnames, glyphindex. To get the
# glyph index from the character code, you have to use get_charmap
"""
from matplotlib.ft2font import FT2Font
font = FT2Font('/usr/local/share/matplotlib/cmr10.ttf')
items = font.get_... | agpl-3.0 |
chrsrds/scikit-learn | sklearn/covariance/robust_covariance.py | 2 | 31957 | """
Robust location and covariance estimators.
Here are implemented estimators that are resistant to outliers.
"""
# Author: Virgile Fritsch <virgile.fritsch@inria.fr>
#
# License: BSD 3 clause
import warnings
import numbers
import numpy as np
from scipy import linalg
from scipy.stats import chi2
from . import empi... | bsd-3-clause |
cg31/tensorflow | tensorflow/contrib/learn/python/learn/estimators/dnn_linear_combined_test.py | 2 | 43185 | # Copyright 2016 The TensorFlow Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applica... | apache-2.0 |
kennethcc2005/yahoo_finance_stocks | candlestick_pattern.py | 1 | 65350 | '''
Candlestick pattern functions not in class type.
'''
import numpy as np
import pandas as pd
import json
import pandas.io.data as web
from datetime import date, datetime, timedelta
from collections import defaultdict
start = datetime(2010, 1, 1)
end = date.today()
df1 = pd.read_csv('data/companylist.csv')
df2 = pd... | mit |
ryfeus/lambda-packs | Opencv_pil/source36/numpy/core/tests/test_multiarray.py | 1 | 302350 | from __future__ import division, absolute_import, print_function
try:
# Accessing collections abstract classes from collections
# has been deprecated since Python 3.3
import collections.abc as collections_abc
except ImportError:
import collections as collections_abc
import tempfile
import sys
import sh... | mit |
GenericMappingTools/gmt-python | pygmt/clib/session.py | 1 | 56855 | """
Defines the Session class to create and destroy a GMT API session and provides
access to the API functions.
Uses ctypes to wrap most of the core functions from the C API.
"""
import ctypes as ctp
import sys
from contextlib import contextmanager
import numpy as np
import pandas as pd
from packaging.version import ... | bsd-3-clause |
buguen/pylayers | pylayers/location/geometric/Scenario_base.py | 1 | 39460 | # -*- coding:Utf-8 -*-
import numpy as np
import scipy as sp
import time
import pdb
import os
import sys
import pickle as pk
import matplotlib.pyplot as plt
from matplotlib.collections import PolyCollection # scenario CDF mode 3D
from matplotlib.colors import colorConverter # scenario CDF mode 3D
from pylayers.l... | lgpl-3.0 |
Sklearn-HMM/scikit-learn-HMM | sklean-hmm/linear_model/omp.py | 3 | 31737 | """Orthogonal matching pursuit algorithms
"""
# Author: Vlad Niculae
#
# License: BSD 3 clause
import warnings
import numpy as np
from scipy import linalg
from scipy.linalg.lapack import get_lapack_funcs
from .base import LinearModel, _pre_fit
from ..base import RegressorMixin
from ..utils import array2d, as_float_... | bsd-3-clause |
cabrer7/PyWignerCUDA | GPU_Wigner2D_GPitaevskii.py | 1 | 75551 | #!/usr/local/epd/bin/python
#-----------------------------------------------------------------------------
# Time independent Quantum propagator by FFT Split operator
#
#-----------------------------------------------------------------------------
import numpy as np
import matplotlib.pyplot
import s... | mit |
nbigaouette/nonlinearmapping | nonlinear_mapping.py | 1 | 39354 | #!/usr/bin/env python2
# -*- coding: utf-8 -*-
#
# Copyright 2011 Nicolas Bigaouette <nbigaouette@gmail.com>
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
... | gpl-3.0 |
boada/planckClusters | MOSAICpipe/bpz-1.99.3/MLab_coe.py | 1 | 56219 | ## Automatically adapted for numpy Jun 08, 2006 by convertcode.py
## ALSO CHECKED MANUALLY: from numpy import *
## CHANGED MANUALLY: inf -> Inf; nan -> NaN
"""Matlab(tm) compatibility functions.
This will hopefully become a complete set of the basic functions available in
matlab. The syntax is kept as close to the ma... | mit |
oguayasa/tobii_pro_wrapper | tobii_pro_wrapper/tobii_pro_wrapper.py | 1 | 60713 | # -*- coding: utf-8 -*-
# Psychopy supported Tobii controller for the new Pro SDK
# Authors: Olivia Guayasamin
# Date: 8/3/2017
# Requirements: Python 2.7 32 Bit (SDK required)
# Tobii Pro SDK 1.0 for Python, and all dependencies
# Psychopy, Psychopy.iohub, and all dependencies
# numpy, scipy, and ... | apache-2.0 |
magne-max/zipline-ja | zipline/assets/assets.py | 1 | 39113 | # Copyright 2016 Quantopian, Inc.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writ... | apache-2.0 |
SU-ECE-17-7/ibeis | ibeis/other/detectfuncs.py | 1 | 63525 | # -*- coding: utf-8 -*-
"""
developer convenience functions for ibs
TODO: need to split up into sub modules:
consistency_checks
feasibility_fixes
move the export stuff to dbio
then there are also convineience functions that need to be ordered at least
within this file
"""
from __future__ import ab... | apache-2.0 |
cbertinato/pandas | pandas/core/dtypes/cast.py | 1 | 43838 | """ routings for casting """
from datetime import datetime, timedelta
import numpy as np
from pandas._libs import lib, tslib, tslibs
from pandas._libs.tslibs import NaT, OutOfBoundsDatetime, Period, iNaT
from .common import (
_INT64_DTYPE, _NS_DTYPE, _POSSIBLY_CAST_DTYPES, _TD_DTYPE, ensure_int8,
ensure_int... | bsd-3-clause |
louispotok/pandas | pandas/tests/indexing/test_coercion.py | 1 | 35156 | # -*- coding: utf-8 -*-
import itertools
import pytest
import numpy as np
import pandas as pd
import pandas.util.testing as tm
import pandas.compat as compat
###############################################################
# Index / Series common tests which may trigger dtype coercions
##############################... | bsd-3-clause |
albertoferna/compmech | compmech/aero/pistonplate/pistonplate.py | 1 | 38908 | from __future__ import division
import gc
import os
import sys
import traceback
from collections import Iterable
import time
import cPickle
from multiprocessing import cpu_count
import __main__
import numpy as np
from scipy.sparse import csr_matrix
from scipy.sparse.linalg import eigs
from scipy.linalg import eig, eig... | bsd-3-clause |
pprett/statsmodels | statsmodels/stats/tests/test_diagnostic.py | 1 | 31607 | # -*- coding: utf-8 -*-
"""Tests for Regression Diagnostics and Specification Tests
Created on Thu Feb 09 13:19:47 2012
Author: Josef Perktold
License: BSD-3
currently all tests are against R
"""
import os
import numpy as np
from numpy.testing import (assert_, assert_almost_equal, assert_equal,
... | bsd-3-clause |
timoMa/vigra | vigranumpy/lib/__init__.py | 1 | 98721 | #######################################################################
#
# Copyright 2009-2010 by Ullrich Koethe
#
# This file is part of the VIGRA computer vision library.
# The VIGRA Website is
# http://hci.iwr.uni-heidelberg.de/vigra/
# Please direct questions, bug reports, and contributions... | mit |
biorack/metatlas | metatlas/plots/dill2plots.py | 1 | 149530 | from __future__ import absolute_import
from __future__ import print_function
import logging
import sys
import os
import os.path
import multiprocessing as mp
import warnings
# os.environ['R_LIBS_USER'] = '/project/projectdirs/metatlas/r_pkgs/'
# curr_ld_lib_path = ''
from metatlas.datastructures import metatlas_object... | bsd-3-clause |
ohinai/mesher | mesher/mesher.py | 1 | 57382 | #! /usr/bin/env python
import cmd
import matplotlib.pyplot as plt
from matplotlib.patches import Polygon
from matplotlib.collections import PatchCollection
from matplotlib.font_manager import FontProperties
import matplotlib
import pylab
import matplotlib.patches as patches
import numpy as np
import copy
import pi... | bsd-3-clause |
dgorissen/pycel | src/pycel/excelcompiler.py | 1 | 44782 | # -*- coding: UTF-8 -*-
#
# Copyright 2011-2019 by Dirk Gorissen, Stephen Rauch and Contributors
# All rights reserved.
# This file is part of the Pycel Library, Licensed under GPLv3 (the 'License')
# You may not use this work except in compliance with the License.
# You may obtain a copy of the Licence at:
# https:/... | gpl-3.0 |
jaeilepp/eggie | mne/epochs.py | 1 | 82772 | """Tools for working with epoched data"""
# Authors: Alexandre Gramfort <alexandre.gramfort@telecom-paristech.fr>
# Matti Hamalainen <msh@nmr.mgh.harvard.edu>
# Daniel Strohmeier <daniel.strohmeier@tu-ilmenau.de>
# Denis Engemann <denis.engemann@gmail.com>
# Mainak Jas <mainak@neuro... | bsd-2-clause |
PanDAWMS/panda-jedi | pandajedi/jedirefine/TaskRefinerBase.py | 1 | 46712 | import re
import sys
import uuid
import copy
import datetime
from six import iteritems
from . import RefinerUtils
from pandajedi.jedicore import Interaction
from pandajedi.jedicore import JediException
from pandajedi.jedicore.JediTaskSpec import JediTaskSpec
from pandajedi.jedicore.JediDatasetSpec import JediDatasetS... | apache-2.0 |
PHOTOX/fuase | ase/ase/atoms.py | 1 | 58186 | # Copyright 2008, 2009 CAMd
# (see accompanying license files for details).
"""Definition of the Atoms class.
This module defines the central object in the ASE package: the Atoms
object.
"""
import warnings
from math import cos, sin
import numpy as np
from ase.atom import Atom
from ase.data import atomic_numbers, ... | gpl-2.0 |
zoidy/wiggly | CrispObjects.py | 1 | 32315 | """
This module contains all classes related to crisp objects.
"""
import FObjects
import numpy as np
import matplotlib.pyplot as plt
import utilities
import _distributions as distributions
class CrispObject(FObjects.FObject):
"""
Base class for all crisp objects. Not instantiable
- *x,y*: Numpy arrays of... | lgpl-3.0 |
vivek425ster/pgmpy | pgmpy/inference/ExactInference.py | 1 | 30994 | #!/usr/bin/env python3
import itertools
import copy
import numpy as np
import networkx as nx
from pgmpy.inference import Inference
from pgmpy.factors.Factor import factor_product
from pgmpy.models import JunctionTree
class VariableElimination(Inference):
def _variable_elimination(self, variables, operation, ev... | mit |
kprestel/PyInvestment | pytech/fin/asset.py | 2 | 58906 | import logging
import os
from abc import ABCMeta
from collections import namedtuple
from datetime import date, datetime, timedelta
from multiprocessing import Process
import numpy as np
import pandas as pd
from pandas_datareader import data as web
from pytech.crawler.spiders.edgar import EdgarSpider
from scrapy.crawle... | mit |
btabibian/scikit-learn | sklearn/model_selection/_split.py | 1 | 73049 | """
The :mod:`sklearn.model_selection._split` module includes classes and
functions to split the data based on a preset strategy.
"""
# Author: Alexandre Gramfort <alexandre.gramfort@inria.fr>,
# Gael Varoquaux <gael.varoquaux@normalesup.org>,
# Olivier Grisel <olivier.grisel@ensta.org>
# Ragha... | bsd-3-clause |
MTgeophysics/mtpy | legacy/modem.py | 1 | 358776 | #!/usr/bin/env python
"""
==================
ModEM
==================
# Generate files for ModEM
# Generate data file for ModEM
# by Paul Soeffky 2013
# revised by LK 2014
# revised by JP 2014
# edited by AK 2016
# revised by JP 2017
# revised by AK 2017 to bring across functionality from ak branch
"""
#============... | gpl-3.0 |
jungmannlab/picasso | picasso/gui/design.py | 1 | 53373 | """
picasso.design-gui
~~~~~~~~~~~~~~~~
GUI for design :
Design rectangular rothemund origami
:author: Maximilian Thomas Strauss, 2016
:copyright: Copyright (c) 2016 Jungmann Lab, MPI of Biochemistry
"""
import glob
import os
import os.path as _ospath
import sys
import traceback
from math i... | mit |
priorknowledge/loom | loom/preql.py | 1 | 31223 | # Copyright (c) 2014, Salesforce.com, Inc. All rights reserved.
#
# Redistribution and use in source and binary forms, with or without
# modification, are permitted provided that the following conditions
# are met:
#
# - Redistributions of source code must retain the above copyright
# notice, this list of conditions... | bsd-3-clause |
jreback/pandas | pandas/tests/frame/methods/test_reindex.py | 1 | 32934 | from datetime import datetime, timedelta
import inspect
from itertools import permutations
import numpy as np
import pytest
import pandas as pd
from pandas import (
Categorical,
CategoricalIndex,
DataFrame,
Index,
MultiIndex,
Series,
date_range,
isna,
)
import pandas._testing as tm
fro... | bsd-3-clause |
vsamtuc/ddssim | cpp/dsrctool.py | 1 | 31870 |
#
# Toolset for data source preparation
#
import h5py
import numpy as np
from bisect import bisect_left, bisect_right
from collections import namedtuple
dds_record_type = np.dtype([
('sid','i2'),
('hid','i2'),
('key','i4'),
('upd','i4'),
('ts', 'i4')
],
align=True)
class metadata:
... | gpl-3.0 |
rdemolgen/snippets | PM1_plots/temp/PM1_plotter.py | 1 | 32136 | from api import *
import re, sys, subprocess, json, os, getpass
import numpy as np
import pandas as pd
from collections import defaultdict
#the purpose of this class is to model and collect the data required of a plot and then write to a file for retention and subsequent plotting
hgmd_username = input("\nEnter HGMD P... | gpl-3.0 |
GaloMALDONADO/motorg | motorog/dynTasks.py | 1 | 50700 | import pinocchio as se3
import numpy as np
import paths as lp
import robot_config as rconf
import mocap_config as mconf
from hqp.wrapper import Wrapper
from trajectory_extractor import References
import ucm
import plot_tools
import csv
import indexes
import plotTasks
from hqp.viewer_utils import Viewer
import matplo... | gpl-3.0 |
pydata/xarray | xarray/core/dataset.py | 1 | 288325 | import copy
import datetime
import inspect
import sys
import warnings
from collections import defaultdict
from html import escape
from numbers import Number
from operator import methodcaller
from pathlib import Path
from typing import (
TYPE_CHECKING,
Any,
Callable,
Collection,
DefaultDict,
Dict... | apache-2.0 |
taxpon/pyzxcvbn | pyzxcvbn/frequency_lists.py | 1 | 679035 | frequency_lists = {"male_names": "james,john,robert,michael,william,david,richard,charles,joseph,thomas,christopher,daniel,paul,mark,donald,george,kenneth,steven,edward,brian,ronald,anthony,kevin,jason,matthew,gary,timothy,jose,larry,jeffrey,frank,scott,eric,stephen,andrew,raymond,gregory,joshua,jerry,dennis,walter,pat... | mit |
TomTranter/OpenPNM | openpnm/materials/VoronoiFibers.py | 1 | 51413 | import math
import scipy as sp
import numpy as np
from scipy import ndimage
import scipy.spatial as sptl
from openpnm import topotools
from scipy.spatial import ConvexHull
import openpnm.models.geometry as gm
from openpnm.utils import logging, Project
from openpnm.network import DelaunayVoronoiDual
from transforms3d im... | mit |
phobson/statsmodels | statsmodels/tsa/statespace/structural.py | 1 | 69046 | """
Univariate structural time series models
Author: Chad Fulton
License: Simplified-BSD
"""
from __future__ import division, absolute_import, print_function
from warnings import warn
from statsmodels.compat.collections import OrderedDict
import numpy as np
import pandas as pd
from statsmodels.tsa.filters.hp_filter ... | bsd-3-clause |
siddharthteotia/arrow | python/pyarrow/tests/test_plasma.py | 1 | 32836 | # Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under the Apache License, Version 2.0 (the
# "License"); you may not u... | apache-2.0 |
wagavulin/arrow | python/pyarrow/parquet.py | 1 | 41154 | # Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under the Apache License, Version 2.0 (the
# "License"); you may not u... | apache-2.0 |
ahnqirage/spark | python/pyspark/sql/functions.py | 1 | 133626 | #
# Licensed to the Apache Software Foundation (ASF) under one or more
# contributor license agreements. See the NOTICE file distributed with
# this work for additional information regarding copyright ownership.
# The ASF licenses this file to You under the Apache License, Version 2.0
# (the "License"); you may not us... | apache-2.0 |
winklerand/pandas | pandas/tests/tseries/test_frequencies.py | 1 | 35393 | from datetime import datetime, timedelta
from pandas.compat import range
import pytest
import numpy as np
from pandas import (Index, DatetimeIndex, Timestamp, Series,
date_range, period_range)
from pandas._libs.tslibs import resolution
import pandas.tseries.frequencies as frequencies
from pandas.... | bsd-3-clause |
jreback/pandas | pandas/plotting/_core.py | 1 | 61556 | import importlib
from typing import TYPE_CHECKING, Optional, Sequence, Tuple, Union
from pandas._config import get_option
from pandas._typing import Label
from pandas.util._decorators import Appender, Substitution
from pandas.core.dtypes.common import is_integer, is_list_like
from pandas.core.dtypes.generic import A... | bsd-3-clause |
jrbourbeau/cr-composition | unfolding/datachallenge.py | 1 | 38671 | #!/usr/bin/env python
from __future__ import division
import os
import argparse
import itertools
from functools import partial
import numpy as np
import pandas as pd
from sklearn.model_selection import train_test_split
import matplotlib.pyplot as plt
import matplotlib.gridspec as gridspec
import seaborn as sns
from da... | mit |
dialounke/pylayers | pylayers/util/geomutil.py | 1 | 167030 | # -*- coding:Utf-8 -*-
"""
.. currentmodule:: pylayers.util.geomutil
"""
from __future__ import print_function
import shapely.geometry as sh
import scipy.linalg as la
import pdb
import logging
import networkx as nx
import doctest
import os
#import mayavi.mlab as mlab
import matplotlib.pyplot as plt
import numpy as np... | mit |
pjryan126/solid-start-careers | store/api/zillow/venv/lib/python2.7/site-packages/pandas/core/indexing.py | 1 | 66750 | # pylint: disable=W0223
from pandas.core.index import Index, MultiIndex
from pandas.compat import range, zip
import pandas.compat as compat
import pandas.core.common as com
import pandas.lib as lib
from pandas.core.common import (is_bool_indexer, is_integer_dtype,
_asarray_tuplesafe, is... | gpl-2.0 |
afraser/CellProfiler-Analyst | cpa/tifffile.py | 1 | 52989 | #!/usr/bin/env python
# -*- coding: utf-8 -*-
# tifffile.py
# Copyright (c) 2008-2009, The Regents of the University of California
# Produced by the Laboratory for Fluorescence Dynamics
# All rights reserved.
#
# Redistribution and use in source and binary forms, with or without
# modification, are permitted provided ... | gpl-2.0 |
rwgdrummer/maskgen | hp_tool/hp/HPSpreadsheet.py | 1 | 81447 | import json
import subprocess
import tarfile
import ttk
from Tkinter import *
import tkFileDialog
import os
import sys
from operator import add
import boto3
from boto3.s3.transfer import S3Transfer
import collections
import pandas as pd
import tkMessageBox
import tkSimpleDialog
import pandastable
import csv
import web... | bsd-3-clause |
ichuang/sympy | sympy/utilities/runtests.py | 1 | 56976 | """
This is our testing framework.
Goals:
* it should be compatible with py.test and operate very similarly
(or identically)
* doesn't require any external dependencies
* preferably all the functionality should be in this file only
* no magic, just import the test file and execute the test functions, that's it
* po... | bsd-3-clause |
gwbpt/VolDeGradient2D | flight_sim/flight_sim_2D.py | 1 | 41712 | #!/usr/bin/env python
# Polaire type 2 Re(Cl) = Re0 * sqrt(Cl)
# remplaces les angles par un repere de rotation
# v 63 : introduction girouette
from __future__ import print_function, division
from pprint import pprint
if 0:
import inspect
for e in dir(inspect):
if "is" in e : print(e)
quit()
fro... | mit |
plotly/python-api | packages/python/plotly/plotly/graph_objs/_streamtube.py | 1 | 80865 | from plotly.basedatatypes import BaseTraceType as _BaseTraceType
import copy as _copy
class Streamtube(_BaseTraceType):
# class properties
# --------------------
_parent_path_str = ""
_path_str = "streamtube"
_valid_props = {
"autocolorscale",
"cauto",
"cmax",
"cmi... | mit |
zfrenchee/pandas | pandas/core/reshape/reshape.py | 1 | 33262 | # pylint: disable=E1101,E1103
# pylint: disable=W0703,W0622,W0613,W0201
from pandas.compat import range, text_type, zip
from pandas import compat
from functools import partial
import itertools
import numpy as np
from pandas.core.dtypes.common import (
_ensure_platform_int,
is_list_like, is_bool_dtype,
nee... | bsd-3-clause |
abhisg/scikit-learn | sklearn/ensemble/gradient_boosting.py | 2 | 69894 | """Gradient Boosted Regression Trees
This module contains methods for fitting gradient boosted regression trees for
both classification and regression.
The module structure is the following:
- The ``BaseGradientBoosting`` base class implements a common ``fit`` method
for all the estimators in the module. Regressio... | bsd-3-clause |
hendrikwout/pynacolada | pynacolada/apply_func_experimental.py | 1 | 43083 | import numpy as np
import math
import xarray as xr
import os
import netCDF4 as nc4
import pandas as pd
from tqdm import tqdm
import tempfile
import logging
logging.basicConfig(level=logging.DEBUG)
def apply_func(func,xarrays,dims_apply, method_dims_no_apply='outer',filenames_out = None, attributes = None,maximum_input... | gpl-3.0 |
yavalvas/yav_com | build/matplotlib/lib/matplotlib/colors.py | 1 | 57547 | """
A module for converting numbers or color arguments to *RGB* or *RGBA*
*RGB* and *RGBA* are sequences of, respectively, 3 or 4 floats in the
range 0-1.
This module includes functions and classes for color specification
conversions, and for mapping numbers to colors in a 1-D array of colors called
a colormap. Color... | mit |
anielsen001/scipy | scipy/signal/filter_design.py | 2 | 129572 | """Filter design.
"""
from __future__ import division, print_function, absolute_import
import warnings
import numpy
from numpy import (atleast_1d, poly, polyval, roots, real, asarray, allclose,
resize, pi, absolute, logspace, r_, sqrt, tan, log10,
arctan, arcsinh, sin, exp, cosh,... | bsd-3-clause |
amitjamadagni/sympy | sympy/utilities/runtests.py | 1 | 64406 | """
This is our testing framework.
Goals:
* it should be compatible with py.test and operate very similarly
(or identically)
* doesn't require any external dependencies
* preferably all the functionality should be in this file only
* no magic, just import the test file and execute the test functions, that's it
* po... | bsd-3-clause |
Chilipp/nc2map | readers.py | 1 | 129034 | # -*- coding: utf-8 -*-
"""readers module of the nc2map python module
This script contains the basic data danagement utilities in the nc2map
module.
It contains the following reader classes
- The ReaderBase class defines the main methods for all readers,
such as data extraction, the merging method and the a... | gpl-2.0 |
DiCarloLab-Delft/PycQED_py3 | pycqed/measurement/openql_experiments/openql_helpers.py | 1 | 30723 | import re
import logging
import numpy as np
from os import remove
from os.path import join, dirname, isfile
import json
from typing import List, Tuple
import matplotlib.pyplot as plt
import matplotlib.patches as mpatches
from matplotlib.ticker import MaxNLocator
import openql.openql as ql
from openql.openql import Pr... | mit |
blaze/dask | dask/dataframe/core.py | 1 | 226830 | import operator
import warnings
from collections.abc import Iterator, Sequence
from functools import wraps, partial
from numbers import Number, Integral
from operator import getitem
from pprint import pformat
import numpy as np
import pandas as pd
from pandas.util import cache_readonly
from pandas.api.types import (
... | bsd-3-clause |
DGrady/pandas | pandas/tests/test_categorical.py | 1 | 176544 | # -*- coding: utf-8 -*-
# pylint: disable=E1101,E1103,W0232
from warnings import catch_warnings
import pytest
import sys
from datetime import datetime
from distutils.version import LooseVersion
import numpy as np
from pandas.core.dtypes.dtypes import CategoricalDtype
from pandas.core.dtypes.common import (
is_ca... | bsd-3-clause |
zhouyao1994/incubator-superset | superset/connectors/sqla/models.py | 1 | 42294 | # Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under the Apache License, Version 2.0 (the
# "License"); you may not u... | apache-2.0 |
bartosh/zipline | zipline/testing/core.py | 1 | 47174 | from abc import ABCMeta, abstractmethod, abstractproperty
from contextlib import contextmanager
from functools import wraps
import gzip
from inspect import getargspec
from itertools import (
combinations,
count,
product,
)
import operator
import os
from os.path import abspath, dirname, join, realpath
import... | apache-2.0 |
agartland/pysieve | meta.py | 1 | 34342 | from __future__ import division
"""
meta.py
contains classes for meta-analysis of multiple simulation datasets
inputs: multiple sieve results objects
methods:
(1) plotting of sensitivity, specificity, performance etc. by parameter values
(2) can be distance specific (e.g. make plots about epitopes identified ... | mit |
tskisner/healpix-autotools | src/healpy/healpy/projaxes.py | 1 | 41590 | #
# This file is part of Healpy.
#
# Healpy is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation; either version 2 of the License, or
# (at your option) any later version.
#
# Healpy is distributed in the hope... | gpl-2.0 |
ondrolexa/pypsbuilder | pypsbuilder/psclasses.py | 1 | 68974 | """pypsbuilder classes used by builders.
This module contains classes and tools providing API to THERMOCALC, parsing of
outputs and storage of calculated invariant points and univariant lines.
Todo:
* Implement own class for divariant fields
"""
# author: Ondrej Lexa
# website: petrol.natur.cuni.cz/~ondro
impor... | gpl-3.0 |
dingmingliu/quanttrade | bt/algos.py | 1 | 33706 | """
A collection of Algos used to create Strategy logic.
"""
import bt
from bt.core import Algo, AlgoStack
import pandas as pd
import numpy as np
import random
def run_always(f):
"""
Run always decorator to be used with Algo
to ensure stack runs the decorated Algo
on each pass, regardless of failures ... | apache-2.0 |
boomsbloom/dtm-fmri | DTM/for_gensim/lib/python2.7/site-packages/matplotlib/animation.py | 1 | 47549 | # TODO:
# * Loop Delay is broken on GTKAgg. This is because source_remove() is not
# working as we want. PyGTK bug?
# * Documentation -- this will need a new section of the User's Guide.
# Both for Animations and just timers.
# - Also need to update http://www.scipy.org/Cookbook/Matplotlib/Animations
# * Blit
... | mit |
SKIRT/PTS | magic/photometry/aperturenoise.py | 1 | 69536 | #!/usr/bin/env python
# -*- coding: utf8 -*-
# *****************************************************************
# ** PTS -- Python Toolkit for working with SKIRT **
# ** © Astronomical Observatory, Ghent University **
# *****************************************************************
##... | agpl-3.0 |
giacomov/3ML | threeML/plugins/SpectrumLike.py | 1 | 98149 | from __future__ import print_function
from __future__ import division
from builtins import zip
from builtins import str
from builtins import range
from past.utils import old_div
import collections
import copy
from contextlib import contextmanager
import matplotlib.pyplot as plt
import numpy as np
import pandas as pd
f... | bsd-3-clause |
dsm054/pandas | pandas/tests/frame/test_dtypes.py | 1 | 41160 | # -*- coding: utf-8 -*-
from __future__ import print_function
import pytest
from datetime import timedelta
import numpy as np
from pandas import (DataFrame, Series, date_range, Timedelta, Timestamp,
Categorical, compat, concat, option_context)
from pandas.compat import u
from pandas import _np_v... | bsd-3-clause |
ndingwall/scikit-learn | sklearn/model_selection/tests/test_validation.py | 1 | 82353 | """Test the validation module"""
import os
import re
import sys
import tempfile
import warnings
from functools import partial
from time import sleep
import pytest
import numpy as np
from scipy.sparse import coo_matrix, csr_matrix
from sklearn.exceptions import FitFailedWarning
from sklearn.model_selection.tests.test_... | bsd-3-clause |
MTgeophysics/mtpy | mtpy/modeling/occam2d.py | 1 | 308066 | # -*- coding: utf-8 -*-
"""
Spin-off from 'occamtools'
(Created August 2011, re-written August 2013)
Tools for Occam2D
authors: JP/LK
Classes:
- Data
- Model
- Setup
- Run
- Plot
- Mask
Functions:
- getdatetime
- makestartfiles
- writemeshfile
- writemodelfile
- writest... | gpl-3.0 |
georgebv/coastlib | coastlib/waves/fenton.py | 1 | 33977 | # coastlib, a coastal engineering Python library
# Copyright (C), 2019 Georgii Bocharov
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) a... | gpl-3.0 |
nkhuyu/blaze | blaze/compute/tests/test_sql_compute.py | 2 | 53619 | from __future__ import absolute_import, division, print_function
import pytest
sa = pytest.importorskip('sqlalchemy')
import itertools
import re
from distutils.version import LooseVersion
import datashape
from odo import into, resource, discover
from pandas import DataFrame
from toolz import unique
from blaze.com... | bsd-3-clause |
winklerand/pandas | pandas/core/dtypes/cast.py | 1 | 38252 | """ routings for casting """
from datetime import datetime, timedelta
import numpy as np
import warnings
from pandas._libs import tslib, lib
from pandas._libs.tslib import iNaT
from pandas.compat import string_types, text_type, PY3
from .common import (_ensure_object, is_bool, is_integer, is_float,
... | bsd-3-clause |
wbsljh/caravel | caravel/viz.py | 1 | 67464 | #coding=utf-8
"""This module contains the "Viz" objects
These objects represent the backend of all the visualizations that
Caravel can render.
"""
from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
from __future__ import unicode_literals
import copy
import has... | apache-2.0 |
annahs/atmos_research | WHI_long_term_v2_FTonly_GEOSChem_and_meas_timeseries.py | 1 | 37148 | import matplotlib.pyplot as plt
from matplotlib import dates
import numpy as np
import os
import sys
from pprint import pprint
from datetime import datetime
from datetime import timedelta
import pickle
import copy
timezone = -8
calib_stability_uncertainty = 0.1
#fire times
fire_time1 = [datetime.strptime('2009/07/27 ... | mit |
genenetwork/pylmm_gn2 | pylmm_gn2/lmm.py | 1 | 34503 | # pylmm is a python-based linear mixed-model solver with applications to GWAS
# Copyright (C) 2013 Nicholas A. Furlotte (nick.furlotte@gmail.com)
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU Affero General Public License as
# published by the Free Software F... | agpl-3.0 |
mistercrunch/panoramix | tests/utils_tests.py | 1 | 44696 | # Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under the Apache License, Version 2.0 (the
# "License"); you may not u... | apache-2.0 |
EducationalTestingService/rsmtool | rsmtool/preprocessor.py | 1 | 120671 | """
Classes for preprocessing input data in various contexts.
:author: Jeremy Biggs (jbiggs@ets.org)
:author: Anastassia Loukina (aloukina@ets.org)
:author: Nitin Madnani (nmadnani@ets.org)
:organization: ETS
"""
import logging
import re
import numpy as np
import pandas as pd
from numpy.random import RandomState
f... | apache-2.0 |
beiko-lab/gengis | bin/Lib/site-packages/scipy/signal/ltisys.py | 1 | 31168 | """
ltisys -- a collection of classes and functions for modeling linear
time invariant systems.
"""
from __future__ import division, print_function, absolute_import
#
# Author: Travis Oliphant 2001
#
# Feb 2010: Warren Weckesser
# Rewrote lsim2 and added impulse2.
#
from .filter_design import tf2zpk, z... | gpl-3.0 |
ironmussa/Optimus | optimus/dataframe/columns.py | 1 | 80093 | import builtins
import re
import string
import sys
import os
import unicodedata
from functools import reduce
from heapq import nlargest
import fastnumbers
import pyspark
import simplejson as json
from glom import glom, assign
from multipledispatch import dispatch
from pypika import MySQLQuery
from pyspark.ml.feature i... | apache-2.0 |
zhonghualiu/FaST-LMM | fastlmm/util/stats/plotp.py | 1 | 30087 | import numpy as np
import scipy as sp
import scipy.stats as st
import scipy.interpolate
import scipy.linalg as la
import pylab as pl
from fastlmm.association.tests import Cv
import fastlmm.util.util as ut
def pnames():
'''
The order here is important. The nearer the start of the list takes precedenc... | apache-2.0 |
ray-project/ray | python/ray/tune/analysis/experiment_analysis.py | 1 | 31427 | import json
import logging
import os
from numbers import Number
from typing import Any, Dict, List, Optional, Tuple
from ray.tune.utils import flatten_dict
from ray.tune.utils.serialization import TuneFunctionDecoder
from ray.tune.utils.util import is_nan_or_inf
try:
import pandas as pd
from pandas import Dat... | apache-2.0 |
anhaidgroup/py_entitymatching | py_entitymatching/blocker/rule_based_blocker.py | 1 | 39921 | import logging
from collections import OrderedDict
import pandas as pd
import numpy as np
import pyprind
import six
from joblib import Parallel, delayed
from py_stringmatching.tokenizer.qgram_tokenizer import QgramTokenizer
from py_stringmatching.tokenizer.whitespace_tokenizer import WhitespaceTokenizer
import cloudpi... | bsd-3-clause |
SasView/sasmodels | sasmodels/resolution.py | 1 | 42963 | """
Define the resolution functions for the data.
This defines classes for 1D and 2D resolution calculations.
"""
from __future__ import division
import unittest
from scipy.special import erf # type: ignore
from numpy import sqrt, log, log10, exp, pi # type: ignore
import numpy as np # type: ignore
__all__ = ["R... | bsd-3-clause |
wangqingbaidu/aliMusic | models/new_songs_incr_with_params.py | 1 | 36031 | # -*- coding: UTF-8 -*-
'''
Authorized by vlon Jang
Created on Jul 3, 2016
Email:zhangzhiwei@ict.ac.cn
From Institute of Computing Technology
All Rights Reserved.
'''
import pandas as pd
import numpy as np
import pymysql
import matplotlib ... | gpl-3.0 |
paalge/scikit-image | skimage/filters/thresholding.py | 1 | 30069 | import itertools
import math
import numpy as np
from scipy import ndimage as ndi
from scipy.ndimage import filters as ndif
from collections import OrderedDict
from ..exposure import histogram
from .._shared.utils import assert_nD, warn
from ..transform import integral_image
from .. import util
from skimage import dtype... | bsd-3-clause |
immerrr/numpy | numpy/lib/function_base.py | 1 | 123782 | from __future__ import division, absolute_import, print_function
__docformat__ = "restructuredtext en"
__all__ = [
'select', 'piecewise', 'trim_zeros', 'copy', 'iterable', 'percentile',
'diff', 'gradient', 'angle', 'unwrap', 'sort_complex', 'disp',
'extract', 'place', 'vectorize', 'asarray_chkfinite', 'ave... | bsd-3-clause |
rs2/pandas | pandas/core/indexes/datetimelike.py | 1 | 31693 | """
Base and utility classes for tseries type pandas objects.
"""
from datetime import datetime, tzinfo
from typing import Any, List, Optional, TypeVar, Union, cast
import numpy as np
from pandas._libs import NaT, Timedelta, iNaT, join as libjoin, lib
from pandas._libs.tslibs import BaseOffset, Resolution, Tick, time... | bsd-3-clause |
MatthewDaggitt/AshCalc | desktop/frames/results_frame.py | 1 | 30433 | import math
import tkinter
from copy import deepcopy
from tkinter import messagebox
from tkinter.ttk import Frame, LabelFrame, Label, Button, Combobox, Separator
import numpy as np
from matplotlib import pyplot
from matplotlib.backends.backend_tkagg import FigureCanvasTkAgg as FigureCanvas
from mpl_toolkits.mplot3d im... | mit |
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