Unnamed: 0
int64
0
64.8k
seqname
stringlengths
4
10
source
stringclasses
2 values
feature
stringclasses
1 value
start
int64
1
249M
end
int64
107
249M
score
float64
8
205k
strand
stringclasses
2 values
frame
int64
0
0
gene_id
stringlengths
17
24
gene_type
stringlengths
3
34
gene_name
stringlengths
2
25
level
int64
1
3
havana_gene
stringlengths
20
22
tag
stringclasses
25 values
0
GL000009.2
ENSEMBL
gene
56,140
58,376
2,237
-
0
ENSG00000278704.1
protein_coding
BX004987.1
3
null
null
1
GL000194.1
ENSEMBL
gene
53,590
115,018
2,179
-
0
ENSG00000277400.1
protein_coding
AC145212.1
3
null
null
2
GL000194.1
ENSEMBL
gene
53,594
115,055
1,599
-
0
ENSG00000274847.1
protein_coding
MAFIP
3
null
null
3
GL000195.1
ENSEMBL
gene
37,434
37,534
101
-
0
ENSG00000277428.1
misc_RNA
RF00019
3
null
null
4
GL000195.1
ENSEMBL
gene
42,939
49,164
2,195
-
0
ENSG00000276256.1
protein_coding
AC011043.1
3
null
null
5
GL000195.1
ENSEMBL
gene
173,872
179,372
1,468
+
0
ENSG00000278198.1
protein_coding
AC011043.2
3
null
null
6
GL000205.2
ENSEMBL
gene
93,050
93,150
101
-
0
ENSG00000276932.1
misc_RNA
RF00019
3
null
null
7
GL000205.2
ENSEMBL
gene
99,351
104,855
1,468
-
0
ENSG00000273496.1
protein_coding
AC011841.1
3
null
null
8
GL000209.2
HAVANA
gene
2,844
11,554
1,035
-
0
ENSG00000273735.4
protein_coding
KIR3DL2
2
OTTHUMG00000189013.2
null
9
GL000209.2
HAVANA
gene
13,877
27,891
1,101
-
0
ENSG00000273517.1
protein_coding
KIR2DS1
2
OTTHUMG00000188995.1
null
10
GL000209.2
HAVANA
gene
29,981
44,855
1,455
-
0
ENSG00000277650.1
protein_coding
AL133414.2
2
OTTHUMG00000188996.1
null
11
GL000209.2
HAVANA
gene
46,835
56,299
1,596
-
0
ENSG00000274676.1
protein_coding
KIR2DL5A
2
OTTHUMG00000188997.1
null
12
GL000209.2
HAVANA
gene
58,558
72,919
1,541
-
0
ENSG00000276534.5
protein_coding
KIR3DS1
2
OTTHUMG00000188998.1
null
13
GL000209.2
HAVANA
gene
74,867
85,943
1,742
-
0
ENSG00000274193.4
protein_coding
KIR2DL4
2
OTTHUMG00000188999.1
null
14
GL000209.2
HAVANA
gene
91,108
104,511
1,294
-
0
ENSG00000276518.1
protein_coding
KIR3DP1
2
OTTHUMG00000189000.1
null
15
GL000209.2
HAVANA
gene
106,757
121,079
1,371
-
0
ENSG00000273661.5
protein_coding
AL133414.1
2
OTTHUMG00000189001.1
null
16
GL000209.2
HAVANA
gene
106,543
137,319
2,030
-
0
ENSG00000278152.2
protein_coding
KIR2DS2
2
OTTHUMG00000189002.1
null
17
GL000209.2
HAVANA
gene
139,698
151,260
1,238
-
0
ENSG00000276433.1
protein_coding
KIR3DL3
2
OTTHUMG00000189003.2
null
18
GL000209.2
HAVANA
gene
162,305
167,842
2,127
-
0
ENSG00000277267.4
transcribed_processed_pseudogene
LILRP2
2
OTTHUMG00000189014.1
null
19
GL000209.2
HAVANA
gene
174,853
175,165
183
-
0
ENSG00000274271.1
unprocessed_pseudogene
LILRP1
2
OTTHUMG00000189015.1
null
20
GL000213.1
ENSEMBL
gene
127,840
127,946
107
-
0
ENSG00000278793.1
snRNA
RF00026
3
null
null
21
GL000213.1
ENSEMBL
gene
108,007
139,659
2,637
-
0
ENSG00000277630.4
protein_coding
BX072566.1
3
null
ncRNA_host
22
GL000216.2
ENSEMBL
gene
93,197
93,309
113
-
0
ENSG00000274202.1
snRNA
RF00004
3
null
null
23
GL000218.1
ENSEMBL
gene
51,867
54,893
3,027
-
0
ENSG00000278384.1
protein_coding
AL354822.1
3
null
null
24
GL000219.1
ENSEMBL
gene
54,224
83,311
372
-
0
ENSG00000273748.1
protein_coding
AL592183.1
3
null
null
25
GL000220.1
ENSEMBL
gene
105,287
105,376
90
+
0
ENSG00000276197.1
misc_RNA
RF01518
3
null
null
26
GL000220.1
ENSEMBL
gene
112,025
112,177
153
+
0
ENSG00000274917.1
rRNA
RNA5-8SN2
3
null
null
27
GL000220.1
ENSEMBL
gene
149,259
149,348
90
+
0
ENSG00000273937.1
misc_RNA
RF01518
3
null
null
28
GL000220.1
ENSEMBL
gene
155,997
156,149
153
+
0
ENSG00000273730.1
rRNA
RNA5-8SN4
3
null
null
29
GL000225.1
ENSEMBL
gene
183,252
183,364
113
+
0
ENSG00000276711.1
snRNA
RF00004
3
null
null
30
GL000250.2
HAVANA
gene
49,218
49,589
372
-
0
ENSG00000272603.1
processed_pseudogene
NOP56P1
2
OTTHUMG00000148686.1
null
31
GL000250.2
HAVANA
gene
103,454
104,591
709
-
0
ENSG00000272793.1
processed_transcript
CR759954.1
2
OTTHUMG00000148688.1
null
32
GL000250.2
HAVANA
gene
127,000
127,631
632
+
0
ENSG00000272613.1
processed_pseudogene
RPL13P
2
OTTHUMG00000148690.1
null
33
GL000250.2
HAVANA
gene
125,209
128,934
2,458
-
0
ENSG00000272857.1
processed_transcript
LINC01623
2
OTTHUMG00000148687.1
null
34
GL000250.2
HAVANA
gene
154,416
155,490
1,075
-
0
ENSG00000236614.1
processed_pseudogene
ZNF90P2
2
OTTHUMG00000148689.1
null
35
GL000250.2
HAVANA
gene
162,114
162,906
413
+
0
ENSG00000234411.1
processed_transcript
HCG14
2
OTTHUMG00000148692.1
null
36
GL000250.2
ENSEMBL
gene
181,230
181,329
100
+
0
ENSG00000264025.1
snRNA
RF00026
3
null
null
37
GL000250.2
HAVANA
gene
168,586
189,574
7,987
-
0
ENSG00000234495.7
protein_coding
TRIM27
2
OTTHUMG00000148849.1
null
38
GL000250.2
HAVANA
gene
251,788
253,069
1,032
+
0
ENSG00000224642.2
processed_transcript
HCG15
2
OTTHUMG00000148693.1
overlapping_locus
39
GL000250.2
HAVANA
gene
252,385
254,160
317
+
0
ENSG00000241408.1
processed_transcript
CR759957.1
2
OTTHUMG00000148691.1
overlapping_locus
40
GL000250.2
HAVANA
gene
260,409
270,941
3,176
-
0
ENSG00000225351.4
protein_coding
ZNF311
2
OTTHUMG00000148791.1
null
41
GL000250.2
HAVANA
gene
292,305
293,232
928
-
0
ENSG00000236070.1
unprocessed_pseudogene
OR2AD1P
2
OTTHUMG00000148793.1
null
42
GL000250.2
HAVANA
gene
309,838
310,865
1,028
-
0
ENSG00000226463.1
protein_coding
OR2W1
2
OTTHUMG00000148790.3
null
43
GL000250.2
HAVANA
gene
351,930
352,936
1,007
-
0
ENSG00000233054.3
protein_coding
OR2B3
2
OTTHUMG00000148792.3
null
44
GL000250.2
HAVANA
gene
366,573
367,511
939
+
0
ENSG00000234305.1
unprocessed_pseudogene
OR2J1
2
OTTHUMG00000148694.2
null
45
GL000250.2
HAVANA
gene
377,511
378,446
936
+
0
ENSG00000226271.1
protein_coding
OR2J3
2
OTTHUMG00000148696.2
null
46
GL000250.2
HAVANA
gene
389,829
394,527
389
+
0
ENSG00000224229.1
processed_transcript
CR942175.1
2
OTTHUMG00000148843.1
null
47
GL000250.2
HAVANA
gene
403,496
404,432
937
-
0
ENSG00000229040.2
unprocessed_pseudogene
CR774181.1
2
OTTHUMG00000148695.1
null
48
GL000250.2
HAVANA
gene
438,929
440,200
1,272
+
0
ENSG00000225550.4
protein_coding
OR2J2
2
OTTHUMG00000148699.3
null
49
GL000250.2
HAVANA
gene
532,565
532,719
155
+
0
ENSG00000226799.1
processed_transcript
CR936918.1
2
OTTHUMG00000148697.1
null
50
GL000250.2
HAVANA
gene
534,096
535,055
960
-
0
ENSG00000230754.1
unprocessed_pseudogene
OR2U2P
2
OTTHUMG00000148698.1
null
51
GL000250.2
HAVANA
gene
556,363
557,305
943
+
0
ENSG00000237690.1
unprocessed_pseudogene
CR936918.2
2
OTTHUMG00000148701.1
null
52
GL000250.2
HAVANA
gene
572,356
573,321
966
+
0
ENSG00000236927.4
protein_coding
OR14J1
2
OTTHUMG00000148700.2
null
53
GL000250.2
HAVANA
gene
688,274
697,631
218
-
0
ENSG00000242289.1
processed_transcript
OR5V1
2
OTTHUMG00000148703.1
overlapping_locus
54
GL000250.2
HAVANA
gene
704,970
706,641
1,672
+
0
ENSG00000230505.4
protein_coding
OR10C1
2
OTTHUMG00000148710.3
null
55
GL000250.2
HAVANA
gene
710,535
715,763
146
-
0
ENSG00000229181.1
processed_transcript
OR12D3
2
OTTHUMG00000148709.3
overlapping_locus
56
GL000250.2
HAVANA
gene
691,169
722,731
2,864
-
0
ENSG00000232289.8
protein_coding
OR11A1
2
OTTHUMG00000148704.1
overlapping_locus
57
GL000250.2
HAVANA
gene
722,841
729,989
3,708
+
0
ENSG00000229125.8
protein_coding
OR2H1
2
OTTHUMG00000148708.1
null
58
GL000250.2
HAVANA
gene
730,257
735,467
381
-
0
ENSG00000237421.1
unprocessed_pseudogene
UBDP1
2
OTTHUMG00000148706.1
null
59
GL000250.2
HAVANA
gene
740,686
741,732
1,047
-
0
ENSG00000229136.1
unprocessed_pseudogene
MAS1LP1
2
OTTHUMG00000148702.1
null
60
GL000250.2
HAVANA
gene
752,427
753,563
1,137
-
0
ENSG00000234954.3
protein_coding
MAS1L
2
OTTHUMG00000148707.2
null
61
GL000250.2
HAVANA
gene
754,933
755,338
406
-
0
ENSG00000232974.3
processed_pseudogene
RPS17P1
2
OTTHUMG00000148705.1
null
62
GL000250.2
HAVANA
gene
763,171
776,217
877
+
0
ENSG00000224753.1
processed_transcript
CR759956.1
2
OTTHUMG00000148711.1
null
63
GL000250.2
HAVANA
gene
795,087
799,235
2,777
+
0
ENSG00000235788.5
processed_transcript
LINC01015
2
OTTHUMG00000148712.1
null
64
GL000250.2
HAVANA
gene
803,371
804,454
1,084
-
0
ENSG00000227576.1
unprocessed_pseudogene
GPR53P
2
OTTHUMG00000148717.1
null
65
GL000250.2
HAVANA
gene
818,913
819,860
948
+
0
ENSG00000226896.2
unprocessed_pseudogene
OR2I1P
2
OTTHUMG00000148769.1
null
66
GL000250.2
HAVANA
gene
821,307
825,621
990
-
0
ENSG00000226898.2
protein_coding
UBD
2
OTTHUMG00000148765.1
overlapping_locus
67
GL000250.2
HAVANA
gene
839,603
840,530
928
+
0
ENSG00000229469.2
unprocessed_pseudogene
OR2H5P
2
OTTHUMG00000148767.1
null
68
GL000250.2
HAVANA
gene
843,154
843,443
290
+
0
ENSG00000225305.2
processed_pseudogene
TMEM183AP1
2
OTTHUMG00000148770.1
null
69
GL000250.2
ENSEMBL
gene
847,943
848,026
84
+
0
ENSG00000265634.1
snoRNA
SNORD32B
3
null
null
70
GL000250.2
HAVANA
gene
848,202
848,719
518
+
0
ENSG00000224053.1
processed_pseudogene
RPL13AP
2
OTTHUMG00000148764.1
null
71
GL000250.2
HAVANA
gene
853,148
854,731
1,584
+
0
ENSG00000224319.4
protein_coding
OR2H2
2
OTTHUMG00000148762.1
null
72
GL000250.2
HAVANA
gene
821,307
898,877
7,010
-
0
ENSG00000232569.8
protein_coding
GABBR1
2
OTTHUMG00000148761.2
overlapping_locus
73
GL000250.2
HAVANA
gene
901,773
902,056
284
-
0
ENSG00000236971.3
processed_pseudogene
SUMO2P1
2
OTTHUMG00000148763.1
null
74
GL000250.2
HAVANA
gene
922,690
938,080
3,058
+
0
ENSG00000234096.9
protein_coding
MOG
2
OTTHUMG00000148766.2
null
75
GL000250.2
HAVANA
gene
938,191
938,841
651
-
0
ENSG00000227858.1
protein_coding
ZFP57
2
OTTHUMG00000148768.2
null
76
GL000250.2
HAVANA
gene
1,057,586
1,058,560
975
-
0
ENSG00000236225.1
unprocessed_pseudogene
HCG4
2
OTTHUMG00000148732.1
null
77
GL000250.2
HAVANA
gene
1,056,693
1,063,412
5,253
+
0
ENSG00000206507.9
transcribed_unprocessed_pseudogene
HLA-V
2
OTTHUMG00000148714.3
null
78
GL000250.2
HAVANA
gene
1,066,038
1,068,045
734
+
0
ENSG00000260538.1
unprocessed_pseudogene
HLA-P
2
OTTHUMG00000172773.1
null
79
GL000250.2
HAVANA
gene
1,068,817
1,069,613
797
-
0
ENSG00000237554.4
processed_pseudogene
RPL7AP7
2
OTTHUMG00000148715.1
null
80
GL000250.2
HAVANA
gene
1,078,185
1,078,316
132
-
0
ENSG00000235714.1
unprocessed_pseudogene
MICG
2
OTTHUMG00000148716.1
null
81
GL000250.2
HAVANA
gene
1,092,997
1,093,977
981
-
0
ENSG00000277480.1
unprocessed_pseudogene
HCG4P8
2
OTTHUMG00000148724.1
null
82
GL000250.2
HAVANA
gene
1,092,579
1,096,751
1,836
+
0
ENSG00000276051.4
protein_coding
HLA-G
2
OTTHUMG00000148844.3
null
83
GL000250.2
HAVANA
gene
1,117,760
1,117,891
132
-
0
ENSG00000278443.1
unprocessed_pseudogene
CR925767.1
2
OTTHUMG00000148719.1
null
84
GL000250.2
HAVANA
gene
1,147,035
1,148,001
967
-
0
ENSG00000228490.1
unprocessed_pseudogene
CT009496.1
2
OTTHUMG00000148727.1
null
85
GL000250.2
HAVANA
gene
1,147,491
1,150,213
1,088
+
0
ENSG00000231904.3
unprocessed_pseudogene
HLA-H
2
OTTHUMG00000148718.1
null
86
GL000250.2
HAVANA
gene
1,156,287
1,157,418
450
+
0
ENSG00000232988.1
unprocessed_pseudogene
HLA-T
2
OTTHUMG00000148728.1
null
87
GL000250.2
HAVANA
gene
1,166,252
1,166,618
192
+
0
ENSG00000235697.1
unprocessed_pseudogene
DDX39BP1
2
OTTHUMG00000148723.1
null
88
GL000250.2
HAVANA
gene
1,167,491
1,168,353
328
-
0
ENSG00000224538.1
unprocessed_pseudogene
MCCD1P1
2
OTTHUMG00000148725.1
null
89
GL000250.2
HAVANA
gene
1,185,660
1,186,650
991
-
0
ENSG00000231287.2
unprocessed_pseudogene
HCG4B
2
OTTHUMG00000148734.1
null
90
GL000250.2
HAVANA
gene
1,186,136
1,188,913
1,037
+
0
ENSG00000233964.2
unprocessed_pseudogene
HLA-K
2
OTTHUMG00000148733.1
null
91
GL000250.2
HAVANA
gene
1,192,024
1,192,209
186
+
0
ENSG00000227366.1
unprocessed_pseudogene
HLA-U
2
OTTHUMG00000148731.1
null
92
GL000250.2
HAVANA
gene
1,199,822
1,200,814
993
-
0
ENSG00000234831.1
unprocessed_pseudogene
CR759913.1
2
OTTHUMG00000148729.1
null
93
GL000250.2
HAVANA
gene
1,214,309
1,216,283
771
+
0
ENSG00000235144.1
unprocessed_pseudogene
HLA-W
2
OTTHUMG00000148730.2
null
94
GL000250.2
HAVANA
gene
1,250,921
1,251,317
258
+
0
ENSG00000235809.1
unprocessed_pseudogene
DDX39BP2
2
OTTHUMG00000148726.1
null
95
GL000250.2
HAVANA
gene
1,252,149
1,253,026
335
-
0
ENSG00000236203.1
unprocessed_pseudogene
MCCD1P2
2
OTTHUMG00000148720.1
null
96
GL000250.2
HAVANA
gene
1,263,830
1,264,825
996
-
0
ENSG00000223798.1
unprocessed_pseudogene
CR759960.1
2
OTTHUMG00000148722.1
overlapping_locus
97
GL000250.2
HAVANA
gene
1,264,292
1,267,665
1,634
+
0
ENSG00000228524.7
transcribed_unprocessed_pseudogene
HLA-J
2
OTTHUMG00000148735.1
null
98
GL000250.2
HAVANA
gene
1,147,348
1,267,669
7,498
+
0
ENSG00000229215.9
protein_coding
HLA-A
2
OTTHUMG00000148721.2
null
99
GL000250.2
HAVANA
gene
1,289,773
1,291,063
984
+
0
ENSG00000235372.1
processed_pseudogene
ETF1P1
2
OTTHUMG00000148775.1
null