Split (1)

train · 64.8k rows

Unnamed: 0 int64 0 64.8k	seqname stringlengths 4 10	source stringclasses 2 values	feature stringclasses 1 value	start int64 1 249M	end int64 107 249M	score float64 8 205k	strand stringclasses 2 values	gene_id stringlengths 17 24	gene_type stringlengths 3 34	gene_name stringlengths 2 25	level int64 1 3	havana_gene stringlengths 20 22 ⌀	tag stringclasses 25 values
200	GL000250.2	HAVANA	gene	4,253,460	4,257,972	2,144	-	ENSG00000242361.7	protein_coding	HLA-DMA	2	OTTHUMG00000148835.4	overlapping_locus
201	GL000250.2	HAVANA	gene	4,239,474	4,257,972	4,829	-	ENSG00000242092.8	protein_coding	HLA-DMB	2	OTTHUMG00000148834.2	overlapping_locus
202	GL000250.2	HAVANA	gene	4,384,119	4,384,528	410	+	ENSG00000231580.1	processed_pseudogene	RPL32P1	2	OTTHUMG00000148837.1	overlapping_locus
203	GL000250.2	HAVANA	gene	4,369,249	4,385,443	5,748	-	ENSG00000235844.8	protein_coding	HLA-DPA1	2	OTTHUMG00000148836.3	null
204	GL000250.2	HAVANA	gene	4,380,588	4,391,853	2,791	+	ENSG00000236693.11	protein_coding	HLA-DPB1	2	OTTHUMG00000148842.1	overlapping_locus
205	GL000250.2	HAVANA	gene	4,396,405	4,401,947	733	-	ENSG00000234260.1	unprocessed_pseudogene	HLA-DPA2	2	OTTHUMG00000148840.1	null
206	GL000250.2	HAVANA	gene	4,408,419	4,411,955	676	-	ENSG00000227577.1	unprocessed_pseudogene	COL11A2P1	2	OTTHUMG00000148838.1	null
207	GL000250.2	HAVANA	gene	4,417,076	4,433,705	1,600	+	ENSG00000226071.9	transcribed_unprocessed_pseudogene	HLA-DPB2	2	OTTHUMG00000148839.3	null
208	GL000250.2	HAVANA	gene	4,435,837	4,435,963	127	-	ENSG00000231895.1	unprocessed_pseudogene	HLA-DPA3	2	OTTHUMG00000148841.1	null
209	GL000250.2	HAVANA	gene	4,670,202	4,670,897	696	-	ENSG00000217281.4	processed_pseudogene	LYPLA2P1	2	OTTHUMG00000148829.1	null
210	GL000251.2	ENSEMBL	gene	654	5,624	219	-	ENSG00000281185.1	protein_coding	GPX6	3	null	null
211	GL000251.2	ENSEMBL	gene	15,893	24,832	1,452	+	ENSG00000257770.5	protein_coding	GPX5	3	null	null
212	GL000251.2	HAVANA	gene	63,388	77,211	3,000	-	ENSG00000248496.3	protein_coding	ZBED9	2	OTTHUMG00000031422.3	null
213	GL000251.2	HAVANA	gene	77,254	81,620	2,873	+	ENSG00000275478.1	processed_transcript	AL671879.1	2	OTTHUMG00000085163.1	null
214	GL000251.2	HAVANA	gene	138,124	144,356	664	-	ENSG00000249032.1	processed_transcript	LINC00533	2	OTTHUMG00000031429.2	null
215	GL000251.2	HAVANA	gene	222,690	223,577	888	+	ENSG00000249814.1	processed_pseudogene	RPSAP2	2	OTTHUMG00000031514.1	null
216	GL000251.2	HAVANA	gene	274,331	274,702	372	-	ENSG00000230574.1	processed_pseudogene	NOP56P1	2	OTTHUMG00000031315.2	null
217	GL000251.2	HAVANA	gene	328,388	329,525	709	-	ENSG00000237006.1	processed_transcript	AL669978.1	2	OTTHUMG00000085278.1	null
218	GL000251.2	HAVANA	gene	351,928	352,559	632	+	ENSG00000226714.1	processed_pseudogene	RPL13P	2	OTTHUMG00000031543.2	null
219	GL000251.2	HAVANA	gene	350,142	353,890	2,453	-	ENSG00000227966.1	processed_transcript	LINC01623	2	OTTHUMG00000085279.1	null
220	GL000251.2	HAVANA	gene	379,538	380,612	1,075	-	ENSG00000235184.1	processed_pseudogene	ZNF90P2	2	OTTHUMG00000031540.2	null
221	GL000251.2	HAVANA	gene	387,229	388,019	411	+	ENSG00000230004.1	processed_transcript	HCG14	2	OTTHUMG00000031579.1	null
222	GL000251.2	ENSEMBL	gene	406,342	406,441	100	+	ENSG00000263937.1	snRNA	RF00026	3	null	null
223	GL000251.2	HAVANA	gene	393,697	414,688	7,983	-	ENSG00000237071.7	protein_coding	TRIM27	2	OTTHUMG00000031515.2	null
224	GL000251.2	HAVANA	gene	430,282	430,942	466	+	ENSG00000237634.1	protein_coding	LINC01556	2	OTTHUMG00000031430.1	null
225	GL000251.2	HAVANA	gene	455,539	456,869	1,331	-	ENSG00000233505.1	processed_pseudogene	KRT18P1	2	OTTHUMG00000031506.2	null
226	GL000251.2	ENSEMBL	gene	463,949	464,247	299	+	ENSG00000263419.2	misc_RNA	RF00017	3	null	null
227	GL000251.2	HAVANA	gene	472,676	473,957	1,032	+	ENSG00000227380.2	processed_transcript	HCG15	2	OTTHUMG00000031565.1	overlapping_locus
228	GL000251.2	HAVANA	gene	473,273	475,009	317	+	ENSG00000239940.1	processed_transcript	AL662865.1	2	OTTHUMG00000031568.1	overlapping_locus
229	GL000251.2	HAVANA	gene	481,256	491,796	3,175	-	ENSG00000223687.4	protein_coding	ZNF311	2	OTTHUMG00000031590.2	null
230	GL000251.2	HAVANA	gene	513,167	514,094	928	-	ENSG00000227626.1	unprocessed_pseudogene	OR2AD1P	2	OTTHUMG00000031560.1	null
231	GL000251.2	HAVANA	gene	530,701	531,728	1,028	-	ENSG00000234101.1	protein_coding	OR2W1	2	OTTHUMG00000031318.4	null
232	GL000251.2	HAVANA	gene	558,310	559,082	773	-	ENSG00000225838.1	unprocessed_pseudogene	OR2P1P	2	OTTHUMG00000031312.2	null
233	GL000251.2	ENSEMBL	gene	550,474	563,010	414	+	ENSG00000274063.1	protein_coding	AL662852.3	3	null	null
234	GL000251.2	HAVANA	gene	563,059	563,654	596	-	ENSG00000226657.1	processed_pseudogene	SAR1AP1	2	OTTHUMG00000031577.2	null
235	GL000251.2	HAVANA	gene	572,851	573,857	1,007	-	ENSG00000233180.3	protein_coding	OR2B3	2	OTTHUMG00000031526.4	null
236	GL000251.2	HAVANA	gene	587,489	588,427	939	+	ENSG00000234804.1	unprocessed_pseudogene	OR2J1	2	OTTHUMG00000031578.1	null
237	GL000251.2	HAVANA	gene	598,439	599,374	936	+	ENSG00000232178.1	protein_coding	OR2J3	2	OTTHUMG00000031362.2	null
238	GL000251.2	HAVANA	gene	610,759	615,455	389	+	ENSG00000232272.1	processed_transcript	AL662852.2	2	OTTHUMG00000085771.1	null
239	GL000251.2	HAVANA	gene	624,424	625,360	937	-	ENSG00000224925.2	unprocessed_pseudogene	AL662852.1	2	OTTHUMG00000031524.1	null
240	GL000251.2	HAVANA	gene	659,846	661,117	1,272	+	ENSG00000231676.4	protein_coding	OR2J2	2	OTTHUMG00000031361.4	null
241	GL000251.2	HAVANA	gene	668,072	669,007	936	+	ENSG00000226610.1	unprocessed_pseudogene	OR2J4P	2	OTTHUMG00000031332.1	null
242	GL000251.2	HAVANA	gene	701,808	702,745	938	+	ENSG00000234092.1	unprocessed_pseudogene	AL662857.3	2	OTTHUMG00000031533.2	null
243	GL000251.2	HAVANA	gene	715,793	716,723	931	-	ENSG00000225150.1	unprocessed_pseudogene	OR2G1P	2	OTTHUMG00000031395.2	null
244	GL000251.2	HAVANA	gene	749,271	750,647	879	-	ENSG00000237366.1	unprocessed_pseudogene	OR2U1P	2	OTTHUMG00000031310.3	null
245	GL000251.2	HAVANA	gene	710,539	753,653	464	+	ENSG00000233950.1	processed_transcript	AL662857.2	2	OTTHUMG00000085770.1	null
246	GL000251.2	HAVANA	gene	755,030	755,989	960	-	ENSG00000226844.1	unprocessed_pseudogene	OR2U2P	2	OTTHUMG00000031325.1	null
247	GL000251.2	HAVANA	gene	777,300	778,242	943	+	ENSG00000231279.2	unprocessed_pseudogene	AL662857.1	2	OTTHUMG00000031494.1	null
248	GL000251.2	HAVANA	gene	793,280	794,245	966	+	ENSG00000225291.4	protein_coding	OR14J1	2	OTTHUMG00000031484.2	null
249	GL000251.2	HAVANA	gene	816,218	817,652	1,435	-	ENSG00000229045.1	processed_pseudogene	DDX6P1	2	OTTHUMG00000031591.2	null
250	GL000251.2	HAVANA	gene	883,016	884,084	1,069	+	ENSG00000235966.4	protein_coding	OR12D2	2	OTTHUMG00000031319.3	null
251	GL000251.2	HAVANA	gene	903,731	904,677	852	+	ENSG00000249030.1	unprocessed_pseudogene	OR12D1	2	OTTHUMG00000031421.2	null
252	GL000251.2	HAVANA	gene	841,820	918,416	1,335	-	ENSG00000233046.8	protein_coding	OR5V1	2	OTTHUMG00000031500.3	overlapping_locus
253	GL000251.2	HAVANA	gene	925,755	927,426	1,672	+	ENSG00000224234.5	protein_coding	OR10C1	2	OTTHUMG00000031508.4	null
254	GL000251.2	HAVANA	gene	860,028	936,549	2,011	-	ENSG00000251394.6	protein_coding	OR12D3	2	OTTHUMG00000031321.2	overlapping_locus
255	GL000251.2	HAVANA	gene	911,953	943,524	2,864	-	ENSG00000230780.8	protein_coding	OR11A1	2	OTTHUMG00000031525.2	overlapping_locus
256	GL000251.2	HAVANA	gene	943,634	950,780	3,708	+	ENSG00000235132.8	protein_coding	OR2H1	2	OTTHUMG00000031320.3	null
257	GL000251.2	HAVANA	gene	951,048	956,260	382	-	ENSG00000227228.1	unprocessed_pseudogene	UBDP1	2	OTTHUMG00000031556.2	null
258	GL000251.2	HAVANA	gene	961,477	962,523	1,047	-	ENSG00000224444.1	unprocessed_pseudogene	MAS1LP1	2	OTTHUMG00000086848.1	null
259	GL000251.2	HAVANA	gene	973,218	974,354	1,137	-	ENSG00000233141.3	protein_coding	MAS1L	2	OTTHUMG00000031359.2	null
260	GL000251.2	HAVANA	gene	975,723	976,128	406	-	ENSG00000232302.3	processed_pseudogene	RPS17P1	2	OTTHUMG00000031356.2	null
261	GL000251.2	HAVANA	gene	983,961	997,008	877	+	ENSG00000232652.1	processed_transcript	AL662869.1	2	OTTHUMG00000086849.1	null
262	GL000251.2	HAVANA	gene	1,015,883	1,020,031	2,777	+	ENSG00000230674.5	processed_transcript	LINC01015	2	OTTHUMG00000066098.2	null
263	GL000251.2	HAVANA	gene	1,024,167	1,025,250	1,084	-	ENSG00000237698.1	processed_pseudogene	GPR53P	2	OTTHUMG00000031406.2	null
264	GL000251.2	HAVANA	gene	1,039,700	1,040,647	948	+	ENSG00000229467.2	unprocessed_pseudogene	OR2I1P	2	OTTHUMG00000031530.2	null
265	GL000251.2	HAVANA	gene	1,042,093	1,046,406	990	-	ENSG00000228913.2	protein_coding	UBD	2	OTTHUMG00000031587.2	overlapping_locus
266	GL000251.2	HAVANA	gene	1,060,389	1,061,316	928	+	ENSG00000226796.2	unprocessed_pseudogene	OR2H5P	2	OTTHUMG00000031559.1	null
267	GL000251.2	HAVANA	gene	1,063,939	1,064,228	290	+	ENSG00000225248.2	processed_pseudogene	TMEM183AP1	2	OTTHUMG00000125535.1	null
268	GL000251.2	ENSEMBL	gene	1,068,729	1,068,812	84	+	ENSG00000266672.1	snoRNA	SNORD32B	3	null	null
269	GL000251.2	HAVANA	gene	1,068,988	1,069,505	518	+	ENSG00000230181.1	processed_pseudogene	RPL13AP	2	OTTHUMG00000031309.1	null
270	GL000251.2	HAVANA	gene	1,073,935	1,075,518	1,584	+	ENSG00000229185.4	protein_coding	OR2H2	2	OTTHUMG00000031322.2	null
271	GL000251.2	HAVANA	gene	1,042,093	1,119,641	7,011	-	ENSG00000232632.8	protein_coding	GABBR1	2	OTTHUMG00000031365.3	overlapping_locus
272	GL000251.2	HAVANA	gene	1,122,536	1,122,819	284	-	ENSG00000223771.3	processed_pseudogene	SUMO2P1	2	OTTHUMG00000031420.1	null
273	GL000251.2	HAVANA	gene	1,143,453	1,158,845	3,062	+	ENSG00000237834.9	protein_coding	MOG	2	OTTHUMG00000031380.5	null
274	GL000251.2	HAVANA	gene	1,158,865	1,167,618	2,149	-	ENSG00000226858.7	protein_coding	ZFP57	2	OTTHUMG00000031440.4	null
275	GL000251.2	HAVANA	gene	1,194,638	1,195,060	423	-	ENSG00000235507.1	processed_pseudogene	ZDHHC20P1	2	OTTHUMG00000125553.1	null
276	GL000251.2	HAVANA	gene	1,206,841	1,207,831	991	-	ENSG00000233935.1	unprocessed_pseudogene	AL669813.2	2	OTTHUMG00000130223.1	null
277	GL000251.2	HAVANA	gene	1,210,525	1,210,995	471	-	ENSG00000241880.1	transcribed_processed_pseudogene	RPL23AP1	2	OTTHUMG00000031379.2	overlapping_locus
278	GL000251.2	HAVANA	gene	1,206,635	1,222,378	4,340	+	ENSG00000137403.19	protein_coding	HLA-F	2	OTTHUMG00000031438.4	null
279	GL000251.2	HAVANA	gene	1,232,135	1,232,359	225	+	ENSG00000224253.1	unprocessed_pseudogene	AL669813.1	2	OTTHUMG00000031441.2	null
280	GL000251.2	HAVANA	gene	1,225,576	1,232,815	1,159	-	ENSG00000251581.1	transcribed_unprocessed_pseudogene	MICE	2	OTTHUMG00000031354.2	overlapping_locus
281	GL000251.2	HAVANA	gene	1,210,457	1,232,895	4,190	-	ENSG00000206446.9	processed_transcript	HLA-F-AS1	2	OTTHUMG00000057543.3	overlapping_locus
282	GL000251.2	ENSEMBL	gene	1,234,216	1,234,317	102	+	ENSG00000263876.1	misc_RNA	RF00019	3	null	null
283	GL000251.2	HAVANA	gene	1,234,572	1,234,992	421	-	ENSG00000228912.2	processed_pseudogene	IFITM4P	2	OTTHUMG00000031378.1	null
284	GL000251.2	HAVANA	gene	1,275,536	1,276,510	975	-	ENSG00000225346.1	unprocessed_pseudogene	HCG4	2	OTTHUMG00000036089.4	null
285	GL000251.2	HAVANA	gene	1,275,135	1,281,358	5,381	+	ENSG00000230238.7	transcribed_unprocessed_pseudogene	HLA-V	2	OTTHUMG00000031575.6	null
286	GL000251.2	HAVANA	gene	1,283,988	1,285,997	747	+	ENSG00000260055.1	unprocessed_pseudogene	HLA-P	2	OTTHUMG00000172778.1	null
287	GL000251.2	HAVANA	gene	1,286,767	1,287,563	797	-	ENSG00000233462.4	processed_pseudogene	RPL7AP7	2	OTTHUMG00000031595.2	null
288	GL000251.2	HAVANA	gene	1,296,135	1,296,266	132	-	ENSG00000229995.1	processed_pseudogene	MICG	2	OTTHUMG00000031357.3	null
289	GL000251.2	HAVANA	gene	1,310,947	1,311,927	981	-	ENSG00000234681.1	unprocessed_pseudogene	HCG4P8	2	OTTHUMG00000130918.1	null
290	GL000251.2	HAVANA	gene	1,310,529	1,314,698	1,833	+	ENSG00000230413.9	protein_coding	HLA-G	2	OTTHUMG00000031439.6	null
291	GL000251.2	HAVANA	gene	1,339,420	1,339,569	150	-	ENSG00000224118.1	unprocessed_pseudogene	AL671561.1	2	OTTHUMG00000031355.2	null
292	GL000251.2	HAVANA	gene	1,368,709	1,369,675	967	-	ENSG00000226152.1	unprocessed_pseudogene	AL671561.2	2	OTTHUMG00000130919.1	null
293	GL000251.2	HAVANA	gene	1,369,165	1,371,887	1,088	+	ENSG00000226893.3	unprocessed_pseudogene	HLA-H	2	OTTHUMG00000031442.1	null
294	GL000251.2	HAVANA	gene	1,377,961	1,379,092	450	+	ENSG00000227027.1	unprocessed_pseudogene	HLA-T	2	OTTHUMG00000031532.2	null
295	GL000251.2	HAVANA	gene	1,387,926	1,388,292	192	+	ENSG00000233241.1	unprocessed_pseudogene	DDX39BP1	2	OTTHUMG00000131005.1	null
296	GL000251.2	HAVANA	gene	1,389,165	1,390,029	330	-	ENSG00000231998.1	unprocessed_pseudogene	MCCD1P1	2	OTTHUMG00000131000.1	null
297	GL000251.2	HAVANA	gene	1,407,336	1,408,326	991	-	ENSG00000227956.2	unprocessed_pseudogene	HCG4B	2	OTTHUMG00000031487.2	null
298	GL000251.2	HAVANA	gene	1,407,810	1,410,587	1,037	+	ENSG00000232331.2	unprocessed_pseudogene	HLA-K	2	OTTHUMG00000031444.2	null
299	GL000251.2	HAVANA	gene	1,413,698	1,413,883	186	+	ENSG00000223352.1	unprocessed_pseudogene	HLA-U	2	OTTHUMG00000031545.2	null

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