reference
stringlengths
7
774
aptamer_chemistry
stringclasses
21 values
aptamer_name
stringlengths
1
164
target_name
stringlengths
2
1.2k
aptamer_sequence
stringlengths
2
380
origin
stringclasses
6 values
target_chemistry
stringclasses
11 values
external_id
stringclasses
509 values
target_sequence
stringclasses
357 values
new_affinity
stringlengths
3
193
null
null
15716492-SchizosaccharomycesPombeAded6M26-18
null
ATTCGCAAACTCAAACACTAGCATCTGACGTCACCCAC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
15716492-SchizosaccharomycesPombeAded6M26-19
null
CAAACACATGGCCTATGACGTCATCGGTAACACCTACGTCTAGA
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
15716492-SchizosaccharomycesPombeAded6M26-20
null
CCGGTCAGAATATGACGTAAGTTGCCTCCC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
15716492-SchizosaccharomycesPombeAded6M26-17
null
CACAATAAATGACGTCATCCGGAACCCACC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
15716492-SchizosaccharomycesPombeAded6M26-16
null
TCNGTCAGTCACATGACGTCACACACTTCCA
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
15716492-SchizosaccharomycesPombeAded6M26-30
null
CCACATGCCTATGACGTCATTCCCCATAGT
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
15716492-SchizosaccharomycesPombeAded6M26-23
null
GGTCTATGACGTCAACCCGACCGCGTGCTA
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
15716492-SchizosaccharomycesPombeAded6M26-28
null
ACCTGCCAAAAGCACCGACTATGACGTCAGACAC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
15716492-SchizosaccharomycesPombeAded6M26-22
null
CGTGCACAGTACCTTCATCTGACGTCATAG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
15716492-SchizosaccharomycesPombeAded6M26-27
null
TGGACCTCACACACATGACGTCATC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
15716492-SchizosaccharomycesPombeAded6M26-25
null
CGCACAAATGACGTCATCGTAGCTGCATCG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
15716492-SchizosaccharomycesPombeAded6M26-24
null
GGAGCATGTAAGCTAAGAATATGACGTCACC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
15716492-SchizosaccharomycesPombeAded6M26-29
null
CAAATTACGACCAATCCGCCATGACGTCACCACCT
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
15716492-SchizosaccharomycesPombeAded6M26-21
null
CAAACGTAAGACTACCAAATGACGTCATAGCC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
15716492-SchizosaccharomycesPombeAded6M26-26
null
GCAGCTAACCACTACTCCCACAATGACGTCATC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
9222504.0
null
9222504-RNA stem loop-1
RNA stem loop
AGTAATACGACTCACTATAGGGAGAATTCCGACCAGAAGCCGAAGCATTCCGGCGTAGGGGTCTGTGCGCAAAACCATCGGCCCTGGTGTGAGGATCCATGTAGACGCACATA
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
9436913-streptomycin-3
Streptomycin
GGAGCUCAGCCUUCACUGCACAACGCUCACUGCUCUAGGGCGCGCGUGAUAGCAGGAGUAGUGGAUCGCAUUUGGACUUCUGCCGCACACAUAGGCACCACGGUCGGAUCCAC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
9436913-streptomycin-4
Streptomycin
GGAGCUCAGCCUUCACUGCCAGACAGUAGAGGGAAGUGUGAGCUAUCACCUCAAGGAAAACGCUUCAGAAAGGGACUUAGGUGAUGAUAGUGUGGCACCACGGUCGGAUCCAC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
9436913-streptomycin-5
Streptomycin
GGAGCUCAGCCUUCACUGCGUAUGCACGCAAGUUGGAGUAGGGUGCUAAUGUUGUGCAAGGAGAACGCUUAAGAAAGGGACUAGUACGAUUAAGGCACCACGGUCGGAUCCAC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
9436913-streptomycin-6
Streptomycin
GGAGCUCAGCCUUCACUGCAGCGCGCGAAAACACUUUAAGAAAGGGAGCCGCAGAUAGCAUUACCACCGUUAGUAGCUGCUUGUAUCAACAUAUAGGCACCACGGUCGGAUCCAC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
9383475.0
null
9383475-VPF/VEGF-1
Vascular endothelial growth factor
GCAACAGAGGCUGAUGGUAGACGCCGGCCA
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
9383475-VPF/VEGF-2
Vascular endothelial growth factor
AGAGUCGCUGAUGGUAGACGCCGGCGGAUC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
9383475-VPF/VEGF-3
Vascular endothelial growth factor
GAGGCUGAUGGCAGACGCCGGCCGAAGACA
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
9383475-VPF/VEGF-4
Vascular endothelial growth factor
CCCUGAUGGUAGACGCCGGGGUGCCGGAA
https://github.com/micheldumontier/aptamerbase
null
null
null
null
9383475.0
null
9383475-VPF-1
Vascular endothelial growth factor
CAUAGGCUUACAACAGAGCGGGGGUUCUGAUGGUAGACGCCGGGACGCCC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
9383475-VPF-2
Vascular endothelial growth factor
UAUGAUGGUAGACGCCGUACCGCAUCAGGCCAAGUCGUCACAGAUCGUG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
10485880-phosphatidylcholine-1
Phosphatidylcholine
UCUCGGAUGAUGGGGGGGCGGGUGUACCGCUAAUAUCUCUCGACACUUGU
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
10485880-phosphatidylcholine-2
Phosphatidylcholine
UCAAACAGGGGGGGGGUAACGACCAUUUUUGCGUGCUAUAAACAGUGGUG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
10485880-phosphatidylcholine-3
Phosphatidylcholine
CAUAGCCUAGUGGAACCGGUUAAGUCCCCAGGGUUGCGACGUAAAGUUGG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
10485880-phosphatidylcholine-4
Phosphatidylcholine
ACUGACUUACGAGACUGUCUCGCCAAUUCCAGUGGGCCUGCGGAUCCUAA
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
10485880-phosphatidylcholine-5
Phosphatidylcholine
CGCGCGAGCGGAUACGGGCGGGGGGGUUCACAGUGAUCCGUGAUUACCA
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
10485880-phosphatidylcholine-6
Phosphatidylcholine
AACCUGAGCGGACAGCGGGCCCCACGCUCGCCUAAACGCUUAGCGCUUC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
10485880-phosphatidylcholine-7
Phosphatidylcholine
GACUGGAGUGUUGCUAGUAGCUAAACCUUUCCCACUUAUAGUGGGUGCGGG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
10485880-phosphatidylcholine-8
Phosphatidylcholine
GUGGUGUGCUGGGCUAUGGCUAUGUAACGAGUGACGAUUGGGAAUUAUCG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
10485880-phosphatidylcholine-9
Phosphatidylcholine
CUGUCUGGACUAGUCAAGUGCGCUAUUUAUCGUGUCAACCUUGGGGUGUG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
10485880-phosphatidylcholine-10
Phosphatidylcholine
UUGCGCUGGGCCUCGUUUUACCCAGCGAAAGUAAUCCUGGGGGCUGAUGA
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
10485880-phosphatidylcholine-11
Phosphatidylcholine
GACGACCUGAGAACCCGUUUUGCGACAGGAUGGCGGCUUUAUCAGGUUUA
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
10485880-phosphatidylcholine-12
Phosphatidylcholine
UCCCGGGCAGGUGCAUCCUACUUCUCUCCACUUACUCCACGCGGCUAUAC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
10485880-phosphatidylcholine-13
Phosphatidylcholine
UACUGAAUCUUAAUUCUGUGCGUGGUGAGGUCCCUGCUGUUGCGUUAGU
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
10485880-phosphatidylcholine-14
Phosphatidylcholine
UUUAUCUCUCUCGAGGGGUCUGACACUACGUAGGGGUAAUCGGUUUGGU
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
8951376-TaqDNAPolymerase-4
Taq polymerase
GGCGGAGCAGTGTGCAGTAGTGTGATGTCAGAGTATCC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
8951376-TaqDNAPolymerase-5
null
GGCGGAGCAGTGTGCGGTAGTGTGATCTGAGAGTATCC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
8951376-TaqDNAPolymerase-3
Taq polymerase
GGCGGAGCGATGTACAGTATCGCTATCGAAAGAGGCTG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
8951376-TaqDNAPolymerase-7
null
GGCGGAGCAGTGTACAGTAGTGTTCCCGGTAGAGCTAT
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
8951376-TaqDNAPolymerase-13
null
CAAGCGGAAACAATGTACAGTATTGGGATC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
8951376-TaqDNAPolymerase-9
null
GGCGGAGCAAGTGTACAGTAGTTGCCTACGCTAGTG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
8951376-TaqDNAPolymerase-15
null
AATTGGGAAACAATGTGCAGTATGTGAAGG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
8951376-TaqDNAPolymerase-12
null
GGCGGAGCACAATGTGAAGTATTGGGGTACGTCAGTAG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
8951376-TaqDNAPolymerase-14
null
AAGGCCATTGATGTACAGTATCAATGCTGC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
8951376-TaqDNAPolymerase-16
null
AAATGGGAAACAATGTGCAGTATTGGAAGG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
8951376-TaqDNAPolymerase-6
null
GGCGGAGCAGTGTGTAGTAGTGTTACGATGGGGACGG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
8951376-TaqDNAPolymerase-10
null
GGCGGAGCAAGTGTGCAGTAGTTACTCATAAGAGACCA
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
8951376-TaqDNAPolymerase-8
null
GGCGGAGCAATGTGCAGTATTGATATCGCTGGTGGTCA
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
8951376-TaqDNAPolymerase-11
null
GGCGGAGCAAGTGTACAGTAGTTGCCTACGCTAGTG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
8951376-TaqDNAPolymerase-28
null
AGAAGCATACGAAGACATTCCAACGTTTGG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
8951376-TaqDNAPolymerase-22
null
AATTGAAGTGACTTTCTCTGCGTTTAGTCG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
8951376-TaqDNAPolymerase-29
null
AATCGATTGTTGAACATTCTGACGTTTTG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
8951376-TaqDNAPolymerase-17
null
ACGCTGACAGGCCACGTTTTGTCATGAT
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
8951376-TaqDNAPolymerase-23
null
AGGAATCTGGGGCATTCTTTGCGTTTTGCG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
8951376-TaqDNAPolymerase-18
null
GAGAACTCCGTTCTTAGCGTATTGGAGTCC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
8951376-TaqDNAPolymerase-24
null
CTCAGGATAAGGTCATTCTAACGTTATGA
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
8951376-TaqDNAPolymerase-27
null
GACCAAGCGTCAAGATATTCAAACGTTTTA
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
8951376-TaqDNAPolymerase-21
null
ATAGGCAGGGGACATTGCAACCTTTTGTCA
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
8951376-TaqDNAPolymerase-26
null
CAAAACGAGAGAGCTTTCTGTGCGTTTAGC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
8951376-TaqDNAPolymerase-25
null
GATCATCTAAGAGCATTCTTAGCGTTTTGG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
8951376-TaqDNAPolymerase-31
null
AGAAGCATACGAAGACATTCCAACGTTTTG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
8951376-TaqDNAPolymerase-19
null
AGGTGGGACATTCTTTGCGTTATGTCTCTGA
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
8951376-TaqDNAPolymerase-20
null
GGGCTCGGAACATTCTTAGCGTTTTGTTCC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
8951376-TaqDNAPolymerase-30
null
AGAAGCATACGAAGACATTCCAACGTTTTG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
12124337.0
null
12124337-PSMA-1
PSMA
ACCGAAAAAGACCUGACUUCUAUACUAAGUCUACGUUCC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
12124337-PSMA-2
PSMA
AUCAGCCAUGUUUACGUCACUCCUUGUCAAUCCUCAUCGG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
14744035.0
null
14744035-HIV-1NucleocapsidProtein-2
HIV-1nucleocapsidProtein
TAATGGAAGTAAGTATATTAATGTGCGTGCTTTGGGACATCGCGATGTT
https://github.com/micheldumontier/aptamerbase
null
null
null
null
9035109.0
null
9035109-keratinocyte growth factor-1
Keratinocyte growth factor
UGGUCUCCCAAUUCUAAACUUUCUCCAUCGUAUCUGGG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
9035109-keratinocyte growth factor-2
Keratinocyte growth factor
GAUCCUUUGUGGGCUCUUGUUGACCCCCUCGUUGUCCCCCC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
9035109-keratinocyte growth factor-3
Keratinocyte growth factor
UCAUGGUGUCUUUCCACAGCUCUUCCCAUGAUCGCCCGG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
9035109-keratinocyte growth factor-4
Keratinocyte growth factor
GGACAANNAGCGGUGUCUUUUCAUUUNNAUCCUCCGACNUCC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
9035109-keratinocyte growth factor-5
Keratinocyte growth factor
GCCCGAUCUACUGCAUUACCGAAACGAUUUCCCCACUGU
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
9035109-keratinocyte growth factor-6
Keratinocyte growth factor
CACCUUAGACCUGUCCUCCAAGCGUGAGUUGCUGUGGCC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
9035109-keratinocyte growth factor-7
Keratinocyte growth factor
UCAAUCGGCGCUUUACUCUUGCGCUCACCGUGCCC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
9035109-keratinocyte growth factor-8
Keratinocyte growth factor
NGACUGAUUUUUCCUUGNCAGUGUAAUUUCCUGGCUGCCC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
9035109-keratinocyte growth factor-9
Keratinocyte growth factor
UGUAGUUUCCCUGUAUGC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
9035109-keratinocyte growth factor-10
Keratinocyte growth factor
UCCAGGGAUUGAAGUGUCGGGGUAGGAACAUAAAGGCGGC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
9035109-keratinocyte growth factor-11
Keratinocyte growth factor
GUGGUGAAGAGGUACCGGAAUUGCUAAAGAUACCACGGCC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
9035109-keratinocyte growth factor-12
Keratinocyte growth factor
GAAGGGACGAUAAAGAGGAAUCGAACAACAAGUGGCUGGC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
9035109-keratinocyte growth factor-13
Keratinocyte growth factor
AGAAGAAUGCAGGAAACAGCGAAAUGCGUGUGGC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
9035109-keratinocyte growth factor-14
Keratinocyte growth factor
AGGGAGCAAUGAACUCAAGUCAAGCCGGGCACGUGGG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
9035109-keratinocyte growth factor-15
Keratinocyte growth factor
GCGGAAGGUCCGAAGACCGGCGAAAGGAACGAGAUUGCC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
9035109-keratinocyte growth factor-16
Keratinocyte growth factor
UGAGCCGGUCGGCAGUAAUGUGACACUGCGG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
11557339.0
null
11557339-lysozyme-1
Lysozyme
ATCAGGGCTAAAGAGTGCAGAGTTACTTAG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
11557339-lysozyme-2
Lysozyme
GGTGATCATGGCAGTGTACGCGGGCGGACA
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
11557339-lysozyme-3
Lysozyme
GGTTGTGAAGATTGGGAGCGTCGTGGCTAC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
11557339-lysozyme-4
Lysozyme
GTAAATCGTCGACAGGAATTGGCGGGCCGG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
11557339-lysozyme-6
Lysozyme
GGAATGAGTGCCCTGCAAGCGAGGGCTAGC
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
11557339-lysozyme-5
Lysozyme
GAATTGCGACAGTCGGGACATGTCGCGAGG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
8755498.0
null
8755498-HIV-1 Rev-1
HIV-1 Rev binding protein
GAAUCAAUACACAGUCCUGGGUGCUAACCAUGAACACCCAAGGCCUUAGUGGUAUGUGGUUCUUG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
8755498-HIV-1 Rev-2
HIV-1 Rev binding protein
GAAUCAAcACACAGUCCUGGGGGCGUAACCAUGAACACCCAAGGCCUUAGUGGUAUGUGGUUCUUG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
8755498-HIV-1 Rev-3
HIV-1 Rev binding protein
GAAUCAAUACACAGUCCUGGGUGCUAACCAUGAACACCCAAGGCCUUAGUGGUGUGUGGUCCCUG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
8755498-HIV-1 Rev-4
HIV-1 Rev binding protein
GAAUCAAUACACAGUCCUGGGUGCUAACCAUGAACACCCAAGGCCUUAGUGGUAUGUGGUUAUUG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
8755498-HIV-1 Rev-5
HIV-1 Rev binding protein
GAGCCAGUAAGUGACCCGUACUAAUACUGUUGAGUAGUAUGUAGAGGAGUGGUGAUCCUCCAAACUGCUG
https://github.com/micheldumontier/aptamerbase
null
null
null
null
null
null
8755498-HIV-1 Rev-6
HIV-1 Rev binding protein
GCUAGGCAAUGAAACGGUUGGAGUAAUCCGGUGGCUUGCCAUGAUUUACGUGAGUGCUGAUCCGUGAUG
https://github.com/micheldumontier/aptamerbase
null
null
null
null