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github | philippboehmsturm/antx-master | spm_get_bf.m | .m | antx-master/xspm8/spm_get_bf.m | 5,655 | utf_8 | 4a302f12929f57bbbe0fc6127fdd7bba | function [xBF] = spm_get_bf(xBF)
% fills in basis function structure
% FORMAT [xBF] = spm_get_bf(xBF);
%
% xBF.dt - time bin length {seconds}
% xBF.name - description of basis functions specified
% xBF.length - window length (seconds)
% xBF.order - order
% xBF.bf - Matrix of basis functions
%
% xBF.name... |
github | philippboehmsturm/antx-master | spm_eeval.m | .m | antx-master/xspm8/spm_eeval.m | 8,442 | utf_8 | e737ca615edb620ef652dad343579121 | function [p,msg] = spm_eeval(str,Type,n,m)
% Expression evaluation
% FORMAT [p,msg] = spm_eeval(str,Type,n,m)
% Str - Expression to work with
%
% Type - type of evaluation
% - 's'tring
% - 'e'valuated string
% - 'n'atural numbers
% - 'w'hole numbers
% - 'i'ntegers
% - 'r'e... |
github | philippboehmsturm/antx-master | spm_check_installation.m | .m | antx-master/xspm8/spm_check_installation.m | 19,118 | utf_8 | 18ee5f8c826ccf3542347a9828085c3c | function spm_check_installation(action)
% Check SPM installation
% FORMAT spm_check_installation('basic')
% Perform a superficial check of SPM installation [default].
%
% FORMAT spm_check_installation('full')
% Perform an in-depth diagnostic of SPM installation.
%
% FORMAT spm_check_installation('build')
% Build signat... |
github | philippboehmsturm/antx-master | spm_eeg_history.m | .m | antx-master/xspm8/spm_eeg_history.m | 7,083 | utf_8 | 0d69e18b7d2f308ba43f7932b0f18cb7 | function H = spm_eeg_history(S)
% Generate a MATLAB script from the history of an M/EEG SPM data file
% FORMAT H = spm_eeg_history(S)
%
% S - filename or input struct (optional)
% (optional) fields of S:
% history - history of M/EEG object (D.history)
% sname - filename of the to be generated MATLAB ... |
github | philippboehmsturm/antx-master | spm_bias_estimate.m | .m | antx-master/xspm8/spm_bias_estimate.m | 6,564 | utf_8 | d82c2ea740642ae1ced08ecfe885e4f2 | function T = spm_bias_estimate(V,flags)
% Estimate image nonuniformity.
%
% FORMAT T = spm_bias_estimate(V,flags)
% V - filename or vol struct of image
% flags - a structure containing the following fields
% nbins - number of bins in histogram (1024)
% reg - amount of regularisation (1)
% cutoff... |
github | philippboehmsturm/antx-master | spm_results_ui.m | .m | antx-master/xspm8/spm_results_ui.m | 55,704 | utf_8 | be173ae190bcefd1a76682fea162cabb | function varargout = spm_results_ui(varargin)
% User interface for SPM/PPM results: Display and analysis of regional effects
% FORMAT [hReg,xSPM,SPM] = spm_results_ui('Setup',[xSPM])
%
% hReg - handle of MIP XYZ registry object
% (see spm_XYZreg.m for details)
% xSPM - structure containing specific SPM, di... |
github | philippboehmsturm/antx-master | spm_eeg_downsample.m | .m | antx-master/xspm8/spm_eeg_downsample.m | 6,776 | utf_8 | 2acedd25acf7d367a7d5e7d1d011cba8 | function D = spm_eeg_downsample(S)
% Downsample M/EEG data
% FORMAT D = spm_eeg_downsample(S)
%
% S - optional input struct
% (optional) fields of S:
% S.D - MEEG object or filename of M/EEG mat-file
% S.fsample_new - new sampling rate, must be lower than the original one
% S.prefix -... |
github | philippboehmsturm/antx-master | spm_eeg_review.m | .m | antx-master/xspm8/spm_eeg_review.m | 9,515 | utf_8 | 66c2b381d0f44f9286400e307a2eddae | function spm_eeg_review(D,flag,inv)
% General review (display) of SPM meeg object
% FORMAT spm_eeg_review(D,flags,inv)
%
% INPUT:
% D - meeg object
% flag - switch to any of the displays (optional)
% inv - which source reconstruction to display (when called from
% spm_eeg_inv_imag_api.m)
%____________________... |
github | philippboehmsturm/antx-master | spm_coreg.m | .m | antx-master/xspm8/spm_coreg.m | 15,129 | utf_8 | 1a1cb266498e19f17d20aef76c6358f0 | function x = spm_coreg(varargin)
% Between modality coregistration using information theory
% FORMAT x = spm_coreg(VG,VF,flags)
% VG - handle for reference image (see spm_vol).
% VF - handle for source (moved) image.
% flags - a structure containing the following elements:
% sep - optimisation sampl... |
github | philippboehmsturm/antx-master | spm_axis.m | .m | antx-master/xspm8/spm_axis.m | 650 | utf_8 | 06a3507b1acc2575b34977be7961e117 | function varargout = spm_axis(varargin)
% AXIS Control axis scaling and appearance.
if nargout
[varargout{1:nargout}] = axis(varargin{:});
else
axis(varargin{:});
end
if nargin ==1 && strcmpi(varargin{1},'tight')
spm_axis(gca,'tight');
elseif nargin == 2 && allAxes(varargin{1}) && strcmpi(varargin{2},'ti... |
github | philippboehmsturm/antx-master | spm_uw_estimate.m | .m | antx-master/xspm8/spm_uw_estimate.m | 33,350 | utf_8 | 640443456204e7ee34b1998cd2a57832 | function ds = spm_uw_estimate(P,par)
% Estimation of partial derivatives of EPI deformation fields.
%
% FORMAT [ds] = spm_uw_estimate((P),(par))
%
% P - List of file names or headers.
% par - Structure containing parameters governing the specifics
% of how to estimate the fields.
% .M... |
github | philippboehmsturm/antx-master | spm_eeg_inv_vbecd_gui.m | .m | antx-master/xspm8/spm_eeg_inv_vbecd_gui.m | 28,153 | utf_8 | 598aea45945f5e4331f926426be3135d | function D = spm_eeg_inv_vbecd_gui(D,val)
% GUI function for Bayesian ECD inversion
% - load the necessary data, if not provided
% - fill in all the necessary bits for the VB-ECD inversion routine,
% - launch the B_ECD routine, aka. spm_eeg_inv_vbecd
% - displays the results.
%__________________________________________... |
github | philippboehmsturm/antx-master | spm_changepath.m | .m | antx-master/xspm8/spm_changepath.m | 3,334 | utf_8 | 131dfc27d3dc8f5c489b56126b71ee9b | function varargout = spm_changepath(Sf, oldp, newp)
% Recursively replace all occurences of a text pattern in a MATLAB variable.
% FORMAT S = spm_changepath(Sf, oldp, newp)
%
% Sf - MATLAB variable to fix, or char array of MAT filenames,
% or directory name (all found MAT files will be analysed)
% oldp... |
github | philippboehmsturm/antx-master | spm_prep2sn.m | .m | antx-master/xspm8/spm_prep2sn.m | 7,382 | utf_8 | 296f1080e48fcd6511bd7e6ac39b97e7 | function [po,pin] = spm_prep2sn(p)
% Convert the output from spm_preproc into an sn.mat file
% FORMAT [po,pin] = spm_prep2sn(p)
% p - the results of spm_preproc
%
% po - the output in a form that can be used by spm_write_sn
% pin - the inverse transform in a form that can be used by spm_write_sn
%
% The outputs are ... |
github | philippboehmsturm/antx-master | cfg_util.m | .m | antx-master/xspm8/matlabbatch/cfg_util.m | 69,449 | utf_8 | 77b870ddcf124262ae1a6edd3161bad5 | function varargout = cfg_util(cmd, varargin)
% This is the command line interface to the batch system. It manages the
% following structures:
% * Generic configuration structure c0. This structure will be initialised
% to an cfg_repeat with empty .values list. Each application should
% provide an application-speci... |
github | philippboehmsturm/antx-master | cfg_load_jobs.m | .m | antx-master/xspm8/matlabbatch/cfg_load_jobs.m | 1,970 | utf_8 | 9737297b9817628afdf1fe120831a43c | function [newjobs uind] = cfg_load_jobs(job)
% function newjobs = cfg_load_jobs(job)
%
% Load a list of possible job files, return a cell list of jobs.
%
% This code is part of a batch job configuration system for MATLAB. See
% help matlabbatch
% for a general overview.
%_________________________________________... |
github | philippboehmsturm/antx-master | cfg_ui.m | .m | antx-master/xspm8/matlabbatch/cfg_ui.m | 67,352 | utf_8 | ea452d4894336f912277165f1aa4e3a3 | function varargout = cfg_ui(varargin)
% CFG_UI M-File for cfg_ui.fig
% CFG_UI, by itself, creates a new CFG_UI or raises the existing
% singleton*.
%
% H = CFG_UI returns the handle to a new CFG_UI or the handle to
% the existing singleton*.
%
% CFG_UI('CALLBACK',hObject,eventData,handles,...) ... |
github | philippboehmsturm/antx-master | gencode_rvalue.m | .m | antx-master/xspm8/matlabbatch/gencode_rvalue.m | 4,767 | utf_8 | 324bb965793e9d6d29c11737869ea998 | function [str, sts] = gencode_rvalue(item)
% GENCODE_RVALUE Code for right hand side of MATLAB assignment
% Generate the right hand side for a valid MATLAB variable
% assignment. This function is a helper to GENCODE, but can be used on
% its own to generate code for the following types of variables:
% * scalar, 1D or... |
github | philippboehmsturm/antx-master | cfg_getfile.m | .m | antx-master/xspm8/matlabbatch/cfg_getfile.m | 46,070 | utf_8 | 3e6a6877315f1b08af13c88de5044295 | function [t,sts] = cfg_getfile(varargin)
% File selector
% FORMAT [t,sts] = cfg_getfile(n,typ,mesg,sel,wd,filt,frames)
% n - Number of files
% A single value or a range. e.g.
% 1 - Select one file
% Inf - Select any number of files
% [1 Inf] - Select 1 to In... |
github | philippboehmsturm/antx-master | cfg_struct2cfg.m | .m | antx-master/xspm8/matlabbatch/cfg_struct2cfg.m | 4,221 | utf_8 | 528320103babd350c9b0d18dcd1ac728 | function cc = cfg_struct2cfg(co, indent)
% Import a config structure into a matlabbatch class tree. Input structures
% are those generated from the configuration editor, cfg2struct methods or
% spm_jobman config structures.
%
% The layout of the configuration tree and the types of configuration items
% have been kept ... |
github | philippboehmsturm/antx-master | cfg_serial.m | .m | antx-master/xspm8/matlabbatch/cfg_serial.m | 10,089 | utf_8 | bcf267514c3f2975d12bf5ba10940323 | function cfg_serial(guifcn, job, varargin)
% This function is deprecated.
% The functionality should replaced by the following sequence of calls:
%
% Instead of
% cfg_serial(guifcn, job, varargin)
% use
% cjob = cfg_util('initjob', job);
% sts = cfg_util('filljobui', cjob, guifcn, varargin);
% if sts
% cfg_util(... |
github | philippboehmsturm/antx-master | gencode.m | .m | antx-master/xspm8/matlabbatch/gencode.m | 8,370 | utf_8 | 622b87c73ebd907748793445b6274507 | function [str, tag, cind] = gencode(item, tag, tagctx)
% GENCODE Generate code to recreate any MATLAB struct/cell variable.
% For any MATLAB variable, this function generates a .m file that
% can be run to recreate it. Classes can implement their class specific
% equivalent of gencode with the same calling syntax. By... |
github | philippboehmsturm/antx-master | cfg_message.m | .m | antx-master/xspm8/matlabbatch/cfg_message.m | 9,875 | utf_8 | 8d66022211a225ece4067413b1b99ed7 | function varargout = cfg_message(varargin)
% function cfg_message(msgid, msgfmt, varargin)
% Display a message. The message identifier msgid will be looked up in a
% message database to decide how to treat this message. This database is
% a struct array with fields:
% .identifier - message id
% .level - message... |
github | philippboehmsturm/antx-master | initialise.m | .m | antx-master/xspm8/matlabbatch/@cfg_branch/initialise.m | 1,882 | utf_8 | e6462e87b54b082c3e9a47f4ab86806b | function item = initialise(item, val, dflag)
% function item = initialise(item, val, dflag)
% Initialise a configuration tree with values. If val is a job
% struct/cell, only the parts of the configuration that are present in
% this job will be initialised.
% If val has the special value '<DEFAULTS>', the entire confi... |
github | philippboehmsturm/antx-master | cfg_run_subsrefvar.m | .m | antx-master/xspm8/matlabbatch/cfg_basicio/cfg_run_subsrefvar.m | 6,686 | utf_8 | daad846e0faec15f03788c48065c474d | function varargout = cfg_run_subsrefvar(cmd, varargin)
% Template function to implement callbacks for an cfg_exbranch. The calling
% syntax is
% varargout = cfg_run_subsrefvar(cmd, varargin)
% where cmd is one of
% 'run' - out = cfg_run_subsrefvar('run', job)
% Run a job, and return its output argumen... |
github | philippboehmsturm/antx-master | cfg_run_call_matlab.m | .m | antx-master/xspm8/matlabbatch/cfg_basicio/cfg_run_call_matlab.m | 5,995 | utf_8 | afc10d877d7bb3f52c6f308ede6c4707 | function varargout = cfg_run_call_matlab(cmd, varargin)
% A generic interface to call any MATLAB function through the batch system
% and make its output arguments available as dependencies.
% varargout = cfg_run_call_matlab(cmd, varargin)
% where cmd is one of
% 'run' - out = cfg_run_call_matlab('run', job)
% ... |
github | philippboehmsturm/antx-master | cfg_load_vars.m | .m | antx-master/xspm8/matlabbatch/cfg_basicio/cfg_load_vars.m | 5,292 | utf_8 | f097076d4059331911b30b3a67a48c3d | function varargout = cfg_load_vars(cmd, varargin)
% Load a .mat file, and return its contents via output dependencies.
% varargout = cfg_load_vars(cmd, varargin)
% where cmd is one of
% 'run' - out = cfg_load_vars('run', job)
% Run a job, and return its output argument
% 'vout' - dep = cfg_load_va... |
github | philippboehmsturm/antx-master | initialise.m | .m | antx-master/xspm8/matlabbatch/@cfg_choice/initialise.m | 2,953 | utf_8 | cb956cc1e0b8157ff8899fc1720189cb | function item = initialise(item, val, dflag)
% function item = initialise(item, val, dflag)
% Initialise a configuration tree with values. If val is a job
% struct/cell, only the parts of the configuration that are present in
% this job will be initialised. If dflag is true, then matching items
% from item.values will... |
github | philippboehmsturm/antx-master | subsasgn.m | .m | antx-master/xspm8/matlabbatch/@cfg_dep/subsasgn.m | 4,222 | utf_8 | a6857a9c1bd09dc62c519bbf634712b6 | function dep = subsasgn(dep, subs, varargin)
% function dep = subsasgn(dep, subs, varargin)
% subscript references we have to deal with are:
% one level
% dep.(field) - i.e. struct('type',{'.'} ,'subs',{field})
% dep(idx) - i.e. struct('type',{'()'},'subs',{idx})
% two levels
% dep(idx).(field)
%
% to be dealt ... |
github | philippboehmsturm/antx-master | cfg_example_cumsum1.m | .m | antx-master/xspm8/matlabbatch/examples/cfg_example_cumsum1.m | 2,891 | utf_8 | 23f6fba4270a8acd77c9324318e47a05 | function cumsum = cfg_example_cumsum1
% Example script that creates an cfg_exbranch to sum two numbers. The
% inputs are entered as vector, the output is a vector containing the
% cumulative sums. This function differs from cfg_example_sum (except from
% names) only in the specification of the output subscript.
%
% Thi... |
github | philippboehmsturm/antx-master | cfg_example_div.m | .m | antx-master/xspm8/matlabbatch/examples/cfg_example_div.m | 3,312 | utf_8 | 0b78f049e9e37d5746c7afc33384510b | function div = cfg_example_div
% Example script that creates an cfg_exbranch to compute mod and rem of two
% natural numbers. The inputs are entered as two single numbers, the output
% is a struct with two fields 'mod' and 'rem'.
%
% This code is part of a batch job configuration system for MATLAB. See
% help mat... |
github | philippboehmsturm/antx-master | cfg_example_add2.m | .m | antx-master/xspm8/matlabbatch/examples/cfg_example_add2.m | 2,622 | utf_8 | 1f1af41a7da0e1e6bd9839d66705b0ed | function add2 = cfg_example_add2
% Example script that creates an cfg_exbranch to sum two numbers. The
% inputs are entered as 2-vector, the output is just a single
% number.
%
% This code is part of a batch job configuration system for MATLAB. See
% help matlabbatch
% for a general overview.
%___________________... |
github | philippboehmsturm/antx-master | cfg_example_add1.m | .m | antx-master/xspm8/matlabbatch/examples/cfg_example_add1.m | 3,291 | utf_8 | ea93e248b0ce90d87b6616e927d55829 | function add1 = cfg_example_add1
% Example script that creates an cfg_exbranch to sum two numbers. The
% inputs are entered as two single numbers, the output is just a single
% number.
%
% This code is part of a batch job configuration system for MATLAB. See
% help matlabbatch
% for a general overview.
%_________... |
github | philippboehmsturm/antx-master | cfg_example_cumsum2.m | .m | antx-master/xspm8/matlabbatch/examples/cfg_example_cumsum2.m | 3,392 | utf_8 | db5b5ac94fe794d4450fecbf07fe0c63 | function cumsum = cfg_example_cumsum2
% Example script that creates an cfg_exbranch to sum two numbers. The
% inputs are entered as vector, the output is a vector containing the
% cumulative sums. This function differs from cfg_example_sum (except from
% names) only in the specification of the output subscript.
%
% Thi... |
github | philippboehmsturm/antx-master | cfg_example_sum.m | .m | antx-master/xspm8/matlabbatch/examples/cfg_example_sum.m | 2,706 | utf_8 | 2dcd9f8e452fa818b4d3aaee964921d5 | function sum = cfg_example_sum
% Example script that creates an cfg_exbranch to sum two numbers. The
% inputs are entered as vector, the output is just a single
% number. This function differs from cfg_example_add2 (except from names)
% only in the specification of input1.num.
%
% This code is part of a batch job confi... |
github | philippboehmsturm/antx-master | cfg_load_jobs.m | .m | antx-master/xspm8/matlabbatch/private/cfg_load_jobs.m | 1,970 | utf_8 | 058edb216e5c1523eb5fcd533ce9cfa6 | function [newjobs uind] = cfg_load_jobs(job)
% function newjobs = cfg_load_jobs(job)
%
% Load a list of possible job files, return a cell list of jobs.
%
% This code is part of a batch job configuration system for MATLAB. See
% help matlabbatch
% for a general overview.
%_________________________________________... |
github | philippboehmsturm/antx-master | num2str.m | .m | antx-master/xspm8/matlabbatch/private/num2str.m | 6,229 | utf_8 | 35ba81d9ba6b78d182aa2136612ac3b2 | function s = num2str(x, f)
%NUM2STR Convert numbers to a string.
% T = NUM2STR(X) converts the matrix X into a string representation T
% with about 4 digits and an exponent if required. This is useful for
% labeling plots with the TITLE, XLABEL, YLABEL, and TEXT commands.
%
% T = NUM2STR(X,N) converts the matr... |
github | philippboehmsturm/antx-master | inputdlg.m | .m | antx-master/xspm8/matlabbatch/private/inputdlg.m | 12,681 | utf_8 | b307689fbe51aff80422b745d656b0b5 | function Answer=inputdlg(Prompt, Title, NumLines, DefAns, Resize)
%INPUTDLG Input dialog box.
% ANSWER = INPUTDLG(PROMPT) creates a modal dialog box that returns user
% input for multiple prompts in the cell array ANSWER. PROMPT is a cell
% array containing the PROMPT strings.
%
% INPUTDLG uses UIWAIT to suspend ex... |
github | philippboehmsturm/antx-master | cfg_justify.m | .m | antx-master/xspm8/matlabbatch/private/cfg_justify.m | 4,781 | utf_8 | f35de815dab47aff40ab2987909d5f26 | function out = cfg_justify(varargin)
% CFG_JUSTIFY Justifies a text string
% OUT = CFG_JUSTIFY(N,TXT) justifies text string TXT to
% the length specified by N.
%
% OUT = CFG_JUSTIFY(OBJ,TXT), where OBJ is a handle to a 'listbox' style
% uicontrol, justifies text string TXT to the width of the OBJ in
% ch... |
github | philippboehmsturm/antx-master | listdlg.m | .m | antx-master/xspm8/matlabbatch/private/listdlg.m | 8,511 | utf_8 | 87109bfdddbe0b70e9a3aa7346fbd072 | function [selection,value] = listdlg(varargin)
%LISTDLG List selection dialog box.
% [SELECTION,OK] = LISTDLG('ListString',S) creates a modal dialog box
% which allows you to select a string or multiple strings from a list.
% SELECTION is a vector of indices of the selected strings (length 1 in
% the single se... |
github | philippboehmsturm/antx-master | cfg_confgui.m | .m | antx-master/xspm8/matlabbatch/cfg_confgui/cfg_confgui.m | 31,065 | utf_8 | 7e950964f42b1fa1eb1485784aab5d6c | function menu_cfg = cfg_confgui
% This function describes the user defined fields for each kind of
% cfg_item and their layout in terms of cfg_items. Thus, the
% configuration system can be used to generate code for new configuration
% files itself.
%
% This code is part of a batch job configuration system for MATLAB.... |
github | philippboehmsturm/antx-master | cfg_run_template.m | .m | antx-master/xspm8/matlabbatch/cfg_confgui/cfg_run_template.m | 4,822 | utf_8 | 183bd6f71f7414a9f76b339601c1087d | function varargout = cfg_run_template(cmd, varargin)
% Template function to implement callbacks for an cfg_exbranch. The calling
% syntax is
% varargout = cfg_run_template(cmd, varargin)
% where cmd is one of
% 'run' - out = cfg_run_template('run', job)
% Run a job, and return its output argument
% 'v... |
github | philippboehmsturm/antx-master | subsasgn_check.m | .m | antx-master/xspm8/matlabbatch/@cfg_entry/subsasgn_check.m | 8,354 | utf_8 | 258ddede644584f90f8655abda9a8f1f | function [sts, val] = subsasgn_check(item,subs,val)
% function [sts, val] = subsasgn_check(item,subs,val)
% Perform validity checks for cfg_entry inputs. Does not yet support
% evaluation of inputs.
%
% This code is part of a batch job configuration system for MATLAB. See
% help matlabbatch
% for a general overv... |
github | philippboehmsturm/antx-master | showdoc.m | .m | antx-master/xspm8/matlabbatch/@cfg_entry/showdoc.m | 1,963 | utf_8 | 9667d455526f2337667bf1ad4424dbfc | function str = showdoc(item, indent)
% function str = showdoc(item, indent)
% Display help text for a cfg_entry item.
%
% This code is part of a batch job configuration system for MATLAB. See
% help matlabbatch
% for a general overview.
%_______________________________________________________________________
% C... |
github | philippboehmsturm/antx-master | resolve_deps.m | .m | antx-master/xspm8/matlabbatch/@cfg_item/resolve_deps.m | 3,622 | utf_8 | fdaa013305212ae2a83040c5ee7f41ad | function [val, sts] = resolve_deps(item, cj)
% function [val, sts] = resolve_deps(item, cj)
% Resolve dependencies for an cfg item. This is a generic function that
% returns the contents of item.val{1} if it is an array of cfg_deps. If
% there is more than one dependency, they will be resolved in order of
% appearance... |
github | philippboehmsturm/antx-master | initialise.m | .m | antx-master/xspm8/matlabbatch/@cfg_repeat/initialise.m | 4,835 | utf_8 | 777a87451848155c3879b72196664aa9 | function item = initialise(item, val, dflag)
% function item = initialise(item, val, dflag)
% Initialise a configuration tree with values. If val is a job
% struct/cell, only the parts of the configuration that are present in
% this job will be initialised. If dflag is true, then matching items
% from item.values will... |
github | philippboehmsturm/antx-master | spm_ovhelper_3Dreg.m | .m | antx-master/xspm8/spm_orthviews/spm_ovhelper_3Dreg.m | 3,534 | utf_8 | 1820adca26f6de47595faa8162381cda | function spm_ovhelper_3Dreg(cmd, varargin)
% Helper function to register spm_orthviews plugins via spm_XYZreg
% FORMAT spm_ovhelper_3Dreg('register', h, V)
% Register a (3D) graphics with the main spm_orthviews display. This will
% draw 3D crosshairs at the current spm_orthviews position and update
% them whenever the ... |
github | philippboehmsturm/antx-master | spm_ov_roi.m | .m | antx-master/xspm8/spm_orthviews/spm_ov_roi.m | 36,776 | utf_8 | aeb54afe2f51c5c9e637c2e3b31f8e18 | function ret = spm_ov_roi(varargin)
% ROI tool - plugin for spm_orthviews
%
% With ROI tool it is possible to create new or modify existing mask images
% interactively. ROI tool can be launched via the spm_orthviews image
% context menu.
% While ROI tool is active, mouse buttons have the following functions:
% left ... |
github | philippboehmsturm/antx-master | spm_cfg_sendmail.m | .m | antx-master/xspm8/toolbox/spm_cfg_sendmail.m | 5,377 | utf_8 | 202a73a362717243076b2289fd67484c | function sendmail = spm_cfg_sendmail
% SPM Configuration file for sendmail
%_______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% $Id: spm_cfg_sendmail.m 2923 2009-03-23 18:34:51Z guillaume $
% --------------------------------------------... |
github | philippboehmsturm/antx-master | coor2D.m | .m | antx-master/xspm8/@meeg/coor2D.m | 4,007 | utf_8 | f94070275bb14e35788e110abf929115 | function [res, plotind] = coor2D(this, ind, val, mindist)
% returns x and y coordinates of channels in 2D plane
% FORMAT coor2D(this)
% _______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% Vladimir Litvak, Laurence Hunt
% $Id: coor2D.m 43... |
github | philippboehmsturm/antx-master | cache.m | .m | antx-master/xspm8/@meeg/cache.m | 754 | utf_8 | 327310c88f9e84a225af302977c46fe6 | function res = cache(this, stuff)
% Method for retrieving/putting stuff from/into the temporary cache
% FORMAT res = cache(obj, name)
% _______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% Stefan Kiebel
% $Id: cache.m 1373 2008-04-11 14:2... |
github | philippboehmsturm/antx-master | path.m | .m | antx-master/xspm8/@meeg/path.m | 558 | utf_8 | 7149045fd0a2ac178f0e2dcaf166b5e0 | function res = path(this, name)
% Method for getting/setting path
% FORMAT res = path(this, name)
% _______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% Stefan Kiebel
% $Id: path.m 1373 2008-04-11 14:24:03Z spm $
switch nargin
case 1... |
github | philippboehmsturm/antx-master | fname.m | .m | antx-master/xspm8/@meeg/fname.m | 538 | utf_8 | 00404808a43026efada0ed0cb853d259 | function res = fname(this, name)
% Method for getting/setting file name
% FORMAT res = fname(this, name)
% _______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% Stefan Kiebel
% $Id: fname.m 1373 2008-04-11 14:24:03Z spm $
switch nargin
... |
github | philippboehmsturm/antx-master | fnamedat.m | .m | antx-master/xspm8/@meeg/fnamedat.m | 589 | utf_8 | 39857f5d9ecf819f3bc1581bde7009cf | function res = fnamedat(this, name)
% Method for getting/setting file name of data file
% FORMAT res = fnamedat(this, name)
% _______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% Stefan Kiebel
% $Id: fnamedat.m 1373 2008-04-11 14:24:03Z s... |
github | philippboehmsturm/antx-master | subsasgn.m | .m | antx-master/xspm8/@file_array/subsasgn.m | 4,602 | utf_8 | 0b4cd116c71239ee913cdf7c826c838a | function obj = subsasgn(obj,subs,dat)
% Overloaded subsasgn function for file_array objects.
% _______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
%
% $Id: subsasgn.m 4136 2010-12-09 22:22:28Z guillaume $
if isempty(subs)
return;
end... |
github | philippboehmsturm/antx-master | subsref.m | .m | antx-master/xspm8/@file_array/subsref.m | 5,317 | utf_8 | 64728e33af32c06b26b99b74b700f1f5 | function varargout=subsref(obj,subs)
% SUBSREF Subscripted reference
% An overloaded function...
%__________________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
%
% $Id: subsref.m 4136 2010-12-09 22:22:28Z guillaume $
if isempty(subs), return; e... |
github | philippboehmsturm/antx-master | disp.m | .m | antx-master/xspm8/@file_array/disp.m | 929 | utf_8 | d0546a638c254605a9122a095e4a06ff | function disp(obj)
% Display a file_array object
% _______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
%
% $Id: disp.m 4136 2010-12-09 22:22:28Z guillaume $
if numel(struct(obj))>1,
fprintf(' %s object: ', class(obj));
sz =... |
github | philippboehmsturm/antx-master | offset.m | .m | antx-master/xspm8/@file_array/private/offset.m | 738 | utf_8 | 366c2df9f0b718e446521ec24447d7a8 | function varargout = offset(varargin)
% Format
% For getting the value
% dat = offset(obj)
%
% For setting the value
% obj = offset(obj,dat)
% _______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
%
% $Id: offset.m 1143 2008-02-07 19:33:33Z ... |
github | philippboehmsturm/antx-master | scl_slope.m | .m | antx-master/xspm8/@file_array/private/scl_slope.m | 724 | utf_8 | 3da54efdb2422c907f41b13b577c1e11 | function varargout = scl_slope(varargin)
% Format
% For getting the value
% dat = scl_slope(obj)
%
% For setting the value
% obj = scl_slope(obj,dat)
% _______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
%
% $Id: scl_slope.m 1143 2008-02-0... |
github | philippboehmsturm/antx-master | scl_inter.m | .m | antx-master/xspm8/@file_array/private/scl_inter.m | 725 | utf_8 | 8beb5c3767db12faab13c212db9a22ee | function varargout = scl_inter(varargin)
% Format
% For getting the value
% dat = scl_inter(obj)
%
% For setting the value
% obj = scl_inter(obj,dat)
% _______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
%
% $Id: scl_inter.m 1143 2008-02-0... |
github | philippboehmsturm/antx-master | fname.m | .m | antx-master/xspm8/@file_array/private/fname.m | 688 | utf_8 | a873d5e909b320be0af566b05e301636 | function varargout = fname(varargin)
% Format
% For getting the value
% dat = fname(obj)
%
% For setting the value
% obj = fname(obj,dat)
% _______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
%
% $Id: fname.m 1143 2008-02-07 19:33:33Z spm ... |
github | philippboehmsturm/antx-master | dim.m | .m | antx-master/xspm8/@file_array/private/dim.m | 800 | utf_8 | ee81353b13c1dd2f6e5a186f9db0f205 | function varargout = dim(varargin)
% Format
% For getting the value
% dat = dim(obj)
%
% For setting the value
% obj = dim(obj,dat)
% _______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
%
% $Id: dim.m 1143 2008-02-07 19:33:33Z spm $
if n... |
github | philippboehmsturm/antx-master | permission.m | .m | antx-master/xspm8/@file_array/private/permission.m | 873 | utf_8 | c058329145646bbcd34aaeffb7184ea9 | function varargout = permission(varargin)
% Format
% For getting the value
% dat = permission(obj)
%
% For setting the value
% obj = permission(obj,dat)
% _______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
%
% $Id: permission.m 1340 2008-... |
github | philippboehmsturm/antx-master | dtype.m | .m | antx-master/xspm8/@file_array/private/dtype.m | 2,265 | utf_8 | 0298fb2f4de45f2f789a8a855bf62a2c | function varargout = dtype(varargin)
% Format
% For getting the value
% dat = dtype(obj)
%
% For setting the value
% obj = dtype(obj,dat)
% _______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
%
% $Id: dtype.m 1143 2008-02-07 19:33:33Z spm ... |
github | philippboehmsturm/antx-master | spm_cfg_ppi.m | .m | antx-master/xspm8/config/spm_cfg_ppi.m | 5,867 | utf_8 | 895e4dae672dbaf9f85422e01a2647f2 | function ppis = spm_cfg_ppi
% SPM Configuration file for PPIs
%__________________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% Guillaume Flandin
% $Id: spm_cfg_ppi.m 4136 2010-12-09 22:22:28Z guillaume $
% ---------------------------------------... |
github | philippboehmsturm/antx-master | spm_cfg_preproc.m | .m | antx-master/xspm8/config/spm_cfg_preproc.m | 30,016 | utf_8 | b471e8090bf6ae6a44134c195fcdaefb | function preproc = spm_cfg_preproc
% SPM Configuration file
% automatically generated by the MATLABBATCH utility function GENCODE
%_______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% $Id: spm_cfg_preproc.m 3124 2009-05-18 08:13:52Z volkm... |
github | philippboehmsturm/antx-master | spm_run_fmri_design.m | .m | antx-master/xspm8/config/spm_run_fmri_design.m | 11,410 | utf_8 | 966cf5ef726bcdbf52473fdcdd3d3525 | function out = spm_run_fmri_design(job)
% Set up the design matrix and run a design.
% SPM job execution function
% takes a harvested job data structure and call SPM functions to perform
% computations on the data.
% Input:
% job - harvested job data structure (see matlabbatch help)
% Output:
% out - computation ... |
github | philippboehmsturm/antx-master | spm_cfg_eeg_grandmean.m | .m | antx-master/xspm8/config/spm_cfg_eeg_grandmean.m | 2,570 | utf_8 | 41cefba7c2387be2142bfcd23931e054 | function S = spm_cfg_eeg_grandmean
% configuration file for averaging evoked responses
%__________________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% Stefan Kiebel
% $Id: spm_cfg_eeg_grandmean.m 3881 2010-05-07 21:02:57Z vladimir $
% ---------... |
github | philippboehmsturm/antx-master | spm_cfg_dicom.m | .m | antx-master/xspm8/config/spm_cfg_dicom.m | 5,587 | utf_8 | bf4d49bb102e084fbe7722b3589b8ea9 | function dicom = spm_cfg_dicom
% SPM Configuration file for DICOM Import
%_______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% $Id: spm_cfg_dicom.m 4012 2010-07-22 12:45:53Z volkmar $
% ---------------------------------------------------... |
github | philippboehmsturm/antx-master | spm_cfg_mfx.m | .m | antx-master/xspm8/config/spm_cfg_mfx.m | 7,440 | utf_8 | a686fb62a68adf0ecfec1bc72c9e10de | function mfx = spm_cfg_mfx
% SPM Configuration file for MFX
%______________________________________________________________________
% Copyright (C) 2010 Wellcome Trust Centre for Neuroimaging
% Guillaume Flandin
% $Id: spm_cfg_mfx.m 4023 2010-07-28 18:41:36Z guillaume $
% ---------------------------------------------... |
github | philippboehmsturm/antx-master | spm_cfg_factorial_design.m | .m | antx-master/xspm8/config/spm_cfg_factorial_design.m | 50,375 | utf_8 | ecbb87ccd5528ba75b6b9a85758a9c3b | function factorial_design = spm_cfg_factorial_design
% SPM Configuration file for 2nd-level models
%_______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% Will Penny
% $Id: spm_cfg_factorial_design.m 3900 2010-05-25 16:17:13Z guillaume $
%... |
github | philippboehmsturm/antx-master | spm_cfg_con.m | .m | antx-master/xspm8/config/spm_cfg_con.m | 33,800 | utf_8 | 79fe74a6a2a79a4f4215918ab982042d | function con = spm_cfg_con
% SPM Configuration file for contrast specification
%_______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% $Id: spm_cfg_con.m 3993 2010-07-13 11:59:32Z volkmar $
rev = '$Rev: 3993 $';
% -------------------------... |
github | philippboehmsturm/antx-master | spm_cfg_eeg_inv_headmodel.m | .m | antx-master/xspm8/config/spm_cfg_eeg_inv_headmodel.m | 8,296 | utf_8 | 375927f6701902a6fefe76d39a8bcab7 | function headmodel = spm_cfg_eeg_inv_headmodel
% configuration file for specifying the head model for source
% reconstruction
%_______________________________________________________________________
% Copyright (C) 2010 Wellcome Trust Centre for Neuroimaging
% Vladimir Litvak
% $Id: spm_cfg_eeg_inv_headmodel.m 5988 20... |
github | philippboehmsturm/antx-master | spm_cfg_eeg_average.m | .m | antx-master/xspm8/config/spm_cfg_eeg_average.m | 3,037 | utf_8 | dd74140584689604aeafa61c63166da8 | function S = spm_cfg_eeg_average
% configuration file for M/EEG epoching
%_______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% Stefan Kiebel
% $Id: spm_cfg_eeg_average.m 3881 2010-05-07 21:02:57Z vladimir $
rev = '$Rev: 3881 $';
D = cfg_... |
github | philippboehmsturm/antx-master | spm_cfg_eeg_fuse.m | .m | antx-master/xspm8/config/spm_cfg_eeg_fuse.m | 1,316 | utf_8 | f68fede02ad0b7e98d3e5bcffb4067f1 | function S = spm_cfg_eeg_fuse
% configuration file for fusing M/EEG files
%_______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% Vladimir Litvak
% $Id: spm_cfg_eeg_fuse.m 3881 2010-05-07 21:02:57Z vladimir $
rev = '$Rev: 3881 $';
D = cfg_... |
github | philippboehmsturm/antx-master | spm_cfg_reorient.m | .m | antx-master/xspm8/config/spm_cfg_reorient.m | 5,240 | utf_8 | 2ea92b7d5abbfb7cc208d7967030afa3 | function reorient = spm_cfg_reorient
% SPM Configuration file
% automatically generated by the MATLABBATCH utility function GENCODE
%_______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% $Id: spm_cfg_reorient.m 4380 2011-07-05 11:27:12Z vo... |
github | philippboehmsturm/antx-master | spm_cfg_fmri_design.m | .m | antx-master/xspm8/config/spm_cfg_fmri_design.m | 41,034 | utf_8 | 7c2e3c73979ddfcadfb52dc27f1888c9 | function fmri_design = spm_cfg_fmri_design
% SPM Configuration file for fMRI model specification (design only)
%_______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% $Id: spm_cfg_fmri_design.m 3691 2010-01-20 17:08:30Z guillaume $
rev = '... |
github | philippboehmsturm/antx-master | spm_cfg_voi.m | .m | antx-master/xspm8/config/spm_cfg_voi.m | 14,416 | utf_8 | a2ccb5fea6f79b4ec5ddf31f014ce87a | function voi = spm_cfg_voi
% SPM Configuration file for VOIs
%__________________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% Guillaume Flandin
% $Id: spm_cfg_voi.m 4513 2011-10-07 17:26:41Z guillaume $
% ----------------------------------------... |
github | philippboehmsturm/antx-master | spm_cfg_defs.m | .m | antx-master/xspm8/config/spm_cfg_defs.m | 12,082 | utf_8 | d7106895556ec79d85dcffa5211d3048 | function conf = spm_cfg_defs
% Configuration file for deformation jobs.
%_______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% John Ashburner
% $Id: spm_cfg_defs.m 4136 2010-12-09 22:22:28Z guillaume $
hsummary = {[...
'This is a utility ... |
github | philippboehmsturm/antx-master | spm_cfg_coreg.m | .m | antx-master/xspm8/config/spm_cfg_coreg.m | 15,295 | utf_8 | d33c81d106b8fca36404ed99f363be34 | function coreg = spm_cfg_coreg
% SPM Configuration file for Coregister
%_______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% $Id: spm_cfg_coreg.m 4380 2011-07-05 11:27:12Z volkmar $
% -----------------------------------------------------... |
github | philippboehmsturm/antx-master | spm_cfg_spm_surf.m | .m | antx-master/xspm8/config/spm_cfg_spm_surf.m | 3,180 | utf_8 | bfb0cbe3b4a7af4aec50af905110631c | function spm_surf_node = spm_cfg_spm_surf
% SPM Configuration file
%_______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% $Id: spm_cfg_spm_surf.m 3081 2009-04-22 20:15:38Z guillaume $
rev = '$Rev: 3081 $';
% ------------------------------... |
github | philippboehmsturm/antx-master | spm_run_voi.m | .m | antx-master/xspm8/config/spm_run_voi.m | 7,634 | utf_8 | 028d2bd9767100793c0c5af2426d1a0b | function out = spm_run_voi(job)
% SPM job execution function
% takes a harvested job data structure and call SPM functions to perform
% computations on the data.
% Input:
% job - harvested job data structure (see matlabbatch help)
% Output:
% out - computation results, usually a struct variable.
%________________... |
github | philippboehmsturm/antx-master | spm_cfg_eeg_merge.m | .m | antx-master/xspm8/config/spm_cfg_eeg_merge.m | 2,920 | utf_8 | 5724987e1f048f63b75ae6f68520be28 | function S = spm_cfg_eeg_merge
% configuration file for merging of M/EEG files
%_______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% Stefan Kiebel, Volkmar Glauche
% $Id: spm_cfg_eeg_merge.m 3881 2010-05-07 21:02:57Z vladimir $
rev = '$R... |
github | philippboehmsturm/antx-master | spm_cfg_eeg_artefact.m | .m | antx-master/xspm8/config/spm_cfg_eeg_artefact.m | 2,704 | utf_8 | 9be0b57d491daf05b39ef0bb0e836673 | function S = spm_cfg_eeg_artefact
% configuration file for M/EEG artefact detection
%_______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% Vladimir Litvak
% $Id: spm_cfg_eeg_artefact.m 3881 2010-05-07 21:02:57Z vladimir $
rev = '$Rev: 388... |
github | philippboehmsturm/antx-master | spm_run_fmri_spec.m | .m | antx-master/xspm8/config/spm_run_fmri_spec.m | 11,586 | utf_8 | 323408725405fe269ac8eb5e2e667b6c | function out = spm_run_fmri_spec(job)
% Set up the design matrix and run a design.
% SPM job execution function
% takes a harvested job data structure and call SPM functions to perform
% computations on the data.
% Input:
% job - harvested job data structure (see matlabbatch help)
% Output:
% out - computation re... |
github | philippboehmsturm/antx-master | spm_cfg_realign.m | .m | antx-master/xspm8/config/spm_cfg_realign.m | 22,762 | utf_8 | 91e216ef099732fd3b42a4b8561c487c | function realign = spm_cfg_realign
% SPM Configuration file
% automatically generated by the MATLABBATCH utility function GENCODE
%_______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% $Id: spm_cfg_realign.m 4152 2011-01-11 14:13:35Z volkm... |
github | philippboehmsturm/antx-master | spm_cfg_smooth.m | .m | antx-master/xspm8/config/spm_cfg_smooth.m | 4,201 | utf_8 | 09740f4ae4c4a5c7260951bcb875e841 | function smooth = spm_cfg_smooth
% SPM Configuration file for Smooth
%_______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% $Id: spm_cfg_smooth.m 3691 2010-01-20 17:08:30Z guillaume $
rev = '$Rev: 3691 $';
% ------------------------------... |
github | philippboehmsturm/antx-master | spm_cfg_eeg_epochs.m | .m | antx-master/xspm8/config/spm_cfg_eeg_epochs.m | 3,555 | utf_8 | b602c570d73c2f10fa1a3f0efe68015e | function S = spm_cfg_eeg_epochs
% configuration file for M/EEG epoching
%_______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% Stefan Kiebel
% $Id: spm_cfg_eeg_epochs.m 3881 2010-05-07 21:02:57Z vladimir $
rev = '$Rev: 3881 $';
D = cfg_fi... |
github | philippboehmsturm/antx-master | spm_cfg_imcalc.m | .m | antx-master/xspm8/config/spm_cfg_imcalc.m | 8,938 | utf_8 | 27ef890fb5b522b50c01dd5e37434086 | function imcalc = spm_cfg_imcalc
% SPM Configuration file for ImCalc
%_______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% $Id: spm_cfg_imcalc.m 4385 2011-07-08 16:53:38Z guillaume $
% ----------------------------------------------------... |
github | philippboehmsturm/antx-master | spm_cfg_eeg_montage.m | .m | antx-master/xspm8/config/spm_cfg_eeg_montage.m | 1,898 | utf_8 | 634d67c28180cedd128491a4bb51ecc8 | function S = spm_cfg_eeg_montage
% configuration file for reading montage files
%_______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% Stefan Kiebel
% $Id: spm_cfg_eeg_montage.m 4212 2011-02-23 17:50:55Z vladimir $
D = cfg_files;
D.tag = ... |
github | philippboehmsturm/antx-master | spm_run_fmri_data.m | .m | antx-master/xspm8/config/spm_run_fmri_data.m | 2,029 | utf_8 | 1c5c4ccd6eaa0935710083844d6d4453 | function out = spm_run_fmri_data(job)
% Set up the design matrix and run a design.
% SPM job execution function
% takes a harvested job data structure and call SPM functions to perform
% computations on the data.
% Input:
% job - harvested job data structure (see matlabbatch help)
% Output:
% out - computation re... |
github | philippboehmsturm/antx-master | spm_cfg_cdir.m | .m | antx-master/xspm8/config/spm_cfg_cdir.m | 1,978 | utf_8 | c3726e2ba4926748da2ed831cb5bd1ce | function cdir = spm_cfg_cdir
% SPM Configuration file for 'cd'
%_______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% $Id: spm_cfg_cdir.m 4907 2012-09-06 19:33:21Z guillaume $
rev = '$Rev: 4907 $';
% --------------------------------------... |
github | philippboehmsturm/antx-master | spm_run_preproc.m | .m | antx-master/xspm8/config/spm_run_preproc.m | 2,209 | utf_8 | 6527bf563f7e57ac5f3cc404fa7e12ce | function out = spm_run_preproc(job)
% SPM job execution function
% takes a harvested job data structure and call SPM functions to perform
% computations on the data.
% Input:
% job - harvested job data structure (see matlabbatch help)
% Output:
% out - computation results, usually a struct variable.
%____________... |
github | philippboehmsturm/antx-master | spm_cfg_eeg_filter.m | .m | antx-master/xspm8/config/spm_cfg_eeg_filter.m | 2,437 | utf_8 | a82fcc280506266a693b6e8d2b0ff67f | function S = spm_cfg_eeg_filter
% configuration file for EEG Filtering
%_______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% Stefan Kiebel
% $Id: spm_cfg_eeg_filter.m 4212 2011-02-23 17:50:55Z vladimir $
rev = '$Rev: 4212 $';
D = cfg_fil... |
github | philippboehmsturm/antx-master | spm_cfg_eeg_bc.m | .m | antx-master/xspm8/config/spm_cfg_eeg_bc.m | 2,077 | utf_8 | cd9810ba021ab48f80a52d739c741c00 | function S = spm_cfg_eeg_bc
% configuration file for baseline correction
%__________________________________________________________________________
% Copyright (C) 2009 Wellcome Trust Centre for Neuroimaging
% Vladimir Litvak
% $Id: spm_cfg_eeg_bc.m 3818 2010-04-13 14:36:31Z vladimir $
%-----------------------------... |
github | philippboehmsturm/antx-master | spm_cfg_eeg_review.m | .m | antx-master/xspm8/config/spm_cfg_eeg_review.m | 780 | utf_8 | 53451e3a49cf80ec8eabbec3f903689a | function S = spm_cfg_eeg_review
% configuration file for M/EEG reviewing tool
%__________________________________________________________________________
% Copyright (C) 2010 Wellcome Trust Centre for Neuroimaging
% Vladimir Litvak
% $Id: spm_cfg_eeg_review.m 3881 2010-05-07 21:02:57Z vladimir $
rev = '$Rev: 3881 $';... |
github | philippboehmsturm/antx-master | spm_cfg_eeg_tf.m | .m | antx-master/xspm8/config/spm_cfg_eeg_tf.m | 3,334 | utf_8 | d3bf9980666e47b4f76cce8420c31fb6 | function S = spm_cfg_eeg_tf
% configuration file for M/EEG time-frequency analysis
%__________________________________________________________________________
% Copyright (C) 2010 Wellcome Trust Centre for Neuroimaging
% Vladimir Litvak
% $Id: spm_cfg_eeg_tf.m 4257 2011-03-18 15:28:29Z vladimir $
rev = '$Rev: 4257 $'... |
github | philippboehmsturm/antx-master | spm_cfg_ecat.m | .m | antx-master/xspm8/config/spm_cfg_ecat.m | 2,223 | utf_8 | bf0ab8263e35bd042da8e4331a6ef6ba | function ecat = spm_cfg_ecat
% SPM Configuration file for ECAT Import
%_______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% $Id: spm_cfg_ecat.m 3691 2010-01-20 17:08:30Z guillaume $
rev = '$Rev: 3691 $';
% -------------------------------... |
github | philippboehmsturm/antx-master | spm_cfg_realignunwarp.m | .m | antx-master/xspm8/config/spm_cfg_realignunwarp.m | 35,630 | utf_8 | 1d4f758948fa9a2af3f66637e97f5b84 | function realignunwarp = spm_cfg_realignunwarp
% SPM Configuration file
% automatically generated by the MATLABBATCH utility function GENCODE
%_______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% $Id: spm_cfg_realignunwarp.m 4152 2011-01-... |
github | philippboehmsturm/antx-master | spm_cfg_eeg_downsample.m | .m | antx-master/xspm8/config/spm_cfg_eeg_downsample.m | 1,627 | utf_8 | b15f0a9d9a0b53425bd6ba4bc8d7a13e | function S = spm_cfg_eeg_downsample
% configuration file for M/EEG downsampling
%_______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% Stefan Kiebel
% $Id: spm_cfg_eeg_downsample.m 3881 2010-05-07 21:02:57Z vladimir $
rev = '$Rev: 3881 $'... |
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