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In a recent paper, we introduced the simultaneous representation problem (defined for any graph class C) and studied the problem for chordal, comparability and permutation graphs. For interval graphs, the problem is defined as follows. Two interval graphs G_1 and G_2, sharing some vertices I (and the corresponding indu...
Simultaneous Interval Graphs
4,500
Clustering under most popular objective functions is NP-hard, even to approximate well, and so unlikely to be efficiently solvable in the worst case. Recently, Bilu and Linial \cite{Bilu09} suggested an approach aimed at bypassing this computational barrier by using properties of instances one might hope to hold in pra...
Center-based Clustering under Perturbation Stability
4,501
In this research endeavor, some Sequence Alignment Algorithms are detailed that are useful for finding or comparing 1 dimensional (1-D), 2 dimensional (2-D), 3 dimensional (3-D) sequences in or against a parent or mother database which is 1 dimensional (1-D), 2 dimensional (2-D), 3 dimensional (3-D) sequence. Inner Pro...
One, Two, Three and N Dimensional String Search Algorithms
4,502
Algorithms to generate various combinatorial structures find tremendous importance in computer science. In this paper, we begin by reviewing an algorithm proposed by Rohl that generates all unique permutations of a list of elements which possibly contains repetitions, taking some or all of the elements at a time, in an...
A Versatile Algorithm to Generate Various Combinatorial Structures
4,503
We consider the offline sorting buffer problem. The input is a sequence of items of different types. All items must be processed one by one by a server. The server is equipped with a random-access buffer of limited capacity which can be used to rearrange items. The problem is to design a scheduling strategy that decide...
The Sorting Buffer Problem is NP-hard
4,504
Two planar graphs G1 and G2 sharing some vertices and edges are `simultaneously planar' if they have planar drawings such that a shared vertex [edge] is represented by the same point [curve] in both drawings. It is an open problem whether simultaneous planarity can be tested efficiently. We give a linear-time algorithm...
Testing Simultaneous Planarity when the Common Graph is 2-Connected
4,505
Scheduling with assignment restrictions is an important special case of scheduling unrelated machines which has attracted much attention in the recent past. While a lower bound on approximability of 3/2 is known for its most general setting, subclasses of the problem admit polynomial-time approximation schemes. This no...
A PTAS for Scheduling with Tree Assignment Restrictions
4,506
A critical variable of a satisfiable CNF formula is a variable that has the same value in all satisfying assignments. Using a simple case distinction on the fraction of critical variables of a CNF formula, we improve the running time for 3-SAT from O(1.32216^n) by Rolf [2006] to O(1.32153^n). Using a different approach...
Improving PPSZ for 3-SAT using Critical Variables
4,507
We propose and develop an efficient implementation of the robust tabu search heuristic for sparse quadratic assignment problems. The traditional implementation of the heuristic applicable to all quadratic assignment problems is of O(N^2) complexity per iteration for problems of size N. Using multiple priority queues to...
An Efficient Implementation of the Robust Tabu Search Heuristic for Sparse Quadratic Assignment Problems
4,508
Kernelization algorithms, usually a preprocessing step before other more traditional algorithms, are very special in the sense that they return (reduced) instances, instead of final results. This characteristic excludes the freedom of applying a kernelization algorithm for the weighted version of a problem to its unwei...
FAST: Kernelization based on Graph Modular Decomposition
4,509
Given a point set S and an unknown metric d on S, we study the problem of efficiently partitioning S into k clusters while querying few distances between the points. In our model we assume that we have access to one versus all queries that given a point s in S return the distances between s and all other points. We sho...
Efficient Clustering with Limited Distance Information
4,510
Recent cognitive experiments have shown that the negative impact of an edge crossing on the human understanding of a graph drawing, tends to be eliminated in the case where the crossing angles are greater than 70 degrees. This motivated the study of RAC drawings, in which every pair of crossing edges intersects at righ...
The Straight-Line RAC Drawing Problem is NP-Hard
4,511
A priority queue is presented that supports the operations insert and find-min in worst-case constant time, and delete and delete-min on element x in worst-case O(lg(min{w_x, q_x}+2)) time, where w_x (respectively q_x) is the number of elements inserted after x (respectively before x) and are still present at the time ...
Priority Queues with Multiple Time Fingers
4,512
Relative worst order analysis is a supplement or alternative to competitive analysis which has been shown to give results more in accordance with observed behavior of online algorithms for a range of different online problems. The contribution of this paper is twofold. First, it adds the static list accessing problem t...
List Factoring and Relative Worst Order Analysis
4,513
We propose a method to exponentially speed up computation of various fingerprints, such as the ones used to compute similarity and rarity in massive data sets. Rather then maintaining the full stream of $b$ items of a universe $[u]$, such methods only maintain a concise fingerprint of the stream, and perform computatio...
Fast Pseudo-Random Fingerprints
4,514
LRM-Trees are an elegant way to partition a sequence of values into sorted consecutive blocks, and to express the relative position of the first element of each block within a previous block. They were used to encode ordinal trees and to index integer arrays in order to support range minimum queries on them. We describ...
LRM-Trees: Compressed Indices, Adaptive Sorting, and Compressed Permutations
4,515
We study the L1 minimization problem with additional box constraints. We motivate the problem with two different views of optimality considerations. We look into imposing such constraints in projected gradient techniques and propose a worst case linear time algorithm to perform such projections. We demonstrate the meri...
L1 Projections with Box Constraints
4,516
For almost two decades the question of whether tabu search (TS) or simulated annealing (SA) performs better for the quadratic assignment problem has been unresolved. To answer this question satisfactorily, we compare performance at various values of targeted solution quality, running each heuristic at its optimal numbe...
Comparative Performance of Tabu Search and Simulated Annealing Heuristics for the Quadratic Assignment Problem
4,517
In the oblivious buy-at-bulk network design problem in a graph, the task is to compute a fixed set of paths for every pair of source-destinations in the graph, such that any set of demands can be routed along these paths. The demands could be aggregated at intermediate edges where the fusion-cost is specified by a cano...
Oblivious Buy-at-Bulk in Planar Graphs
4,518
This paper introduces a special family of randomized algorithms for Max DICUT that we call oblivious algorithms. Let the bias of a vertex be the ratio between the total weight of its outgoing edges and the total weight of all its edges. An oblivious algorithm selects at random in which side of the cut to place a vertex...
Oblivious Algorithms for the Maximum Directed Cut Problem
4,519
Very recently a new algorithm to the nonnegative single-source shortest path problem on road networks has been discovered. It is very cache-efficient, but only on static road networks. We show how to augment it to the time-dependent scenario. The advantage if the new approach is that it settles nodes, even for a profil...
Engineering Time-dependent One-To-All Computation
4,520
We give O(log^2 n)-approximation algorithm based on the cut-matching framework of [10, 13, 14] for computing the sparsest cut on directed graphs. Our algorithm uses only O(log^2 n) single commodity max-flow computations and thus breaks the multicommodity-flow barrier for computing the sparsest cut on directed graphs
Cut-Matching Games on Directed Graphs
4,521
In this paper, we use a new method to decrease the parameterized complexity bound for finding the minimum vertex cover of connected max-degree-3 undirected graphs. The key operation of this method is reduction of the size of a particular subset of edges which we introduce in this paper and is called as "real-cycle" sub...
Improved Complexity Bound of Vertex Cover for Low degree Graph
4,522
In two-stage robust optimization the solution to a problem is built in two stages: In the first stage a partial, not necessarily feasible, solution is exhibited. Then the adversary chooses the "worst" scenario from a predefined set of scenarios. In the second stage, the first-stage solution is extended to become feasib...
Improved approximations for robust mincut and shortest path
4,523
Given an undirected graph $G$, a collection $\{(s_1,t_1),..., (s_k,t_k)\}$ of pairs of vertices, and an integer $p$, the Edge Multicut problem ask if there is a set $S$ of at most $p$ edges such that the removal of $S$ disconnects every $s_i$ from the corresponding $t_i$. Vertex Multicut is the analogous problem where ...
Fixed-parameter tractability of multicut parameterized by the size of the cutset
4,524
We show that the set of realizations of a given dimension of a max-plus linear sequence is a finite union of polyhedral sets, which can be computed from any realization of the sequence. This yields an (expensive) algorithm to solve the max-plus minimal realization problem. These results are derived from general facts o...
The set of realizations of a max-plus linear sequence is semi-polyhedral
4,525
In this paper, we consider the following graph partitioning problem: The input is an undirected graph $G=(V,E),$ a balance parameter $b \in (0,1/2]$ and a target conductance value $\gamma \in (0,1).$ The output is a cut which, if non-empty, is of conductance at most $O(f),$ for some function $f(G, \gamma),$ and which i...
Towards an SDP-based Approach to Spectral Methods: A Nearly-Linear-Time Algorithm for Graph Partitioning and Decomposition
4,526
We consider energy-efficient scheduling on multiprocessors, where the speed of each processor can be individually scaled, and a processor consumes power $s^{\alpha}$ when running at speed $s$, for $\alpha>1$. A scheduling algorithm needs to decide at any time both processor allocations and processor speeds for a set of...
Energy-Efficient Multiprocessor Scheduling for Flow Time and Makespan
4,527
Given two testable properties $\mathcal{P}_{1}$ and $\mathcal{P}_{2}$, under what conditions are the union, intersection or set-difference of these two properties also testable? We initiate a systematic study of these basic set-theoretic operations in the context of property testing. As an application, we give a concep...
Property Testing via Set-Theoretic Operations
4,528
Let $G=(V,E)$ be a graph on $n$ vertices and $R$ be a set of pairs of vertices in $V$ called \emph{requests}. A \emph{multicut} is a subset $F$ of $E$ such that every request $xy$ of $R$ is cut by $F$, \i.e. every $xy$-path of $G$ intersects $F$. We show that there exists an $O(f(k)n^c)$ algorithm which decides if ther...
Multicut is FPT
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We analyze the so-called ppz algorithm for (d,k)-CSP problems for general values of d (number of values a variable can take) and k (number of literals per constraint). To analyze its success probability, we prove a correlation inequality for submodular functions.
PPZ For More Than Two Truth Values - An Algorithm for Constraint Satisfaction Problems
4,530
We study the problem of Upward Point-Set Embeddability, that is the problem of deciding whether a given upward planar digraph $D$ has an upward planar embedding into a point set $S$. We show that any switch tree admits an upward planar straight-line embedding into any convex point set. For the class of $k$-switch trees...
Upward Point-Set Embeddability
4,531
A mixed graph is a graph with both directed and undirected edges. We present an algorithm for deciding whether a given mixed graph on $n$ vertices contains a feedback vertex set (FVS) of size at most $k$, in time $2^{O(k)}k! O(n^4)$. This is the first fixed parameter tractable algorithm for FVS that applies to both dir...
Feedback Vertex Set in Mixed Graphs
4,532
We study the problem of learning to rank from pairwise preferences, and solve a long-standing open problem that has led to development of many heuristics but no provable results for our particular problem. Given a set $V$ of $n$ elements, we wish to linearly order them given pairwise preference labels. A pairwise prefe...
An Active Learning Algorithm for Ranking from Pairwise Preferences with an Almost Optimal Query Complexity
4,533
Alon and Krivelevich (SIAM J. Discrete Math. 15(2): 211-227 (2002)) show that if a graph is {\epsilon}-far from bipartite, then the subgraph induced by a random subset of O(1/{\epsilon}) vertices is bipartite with high probability. We conjecture that the induced subgraph is {\Omega}~({\epsilon})-far from bipartite with...
A better tester for bipartiteness?
4,534
One of the classic results in scheduling theory is the 2-approximation algorithm by Lenstra, Shmoys, and Tardos for the problem of scheduling jobs to minimize makespan on unrelated machines, i.e., job j requires time p_{ij} if processed on machine i. More than two decades after its introduction it is still the algorith...
Santa Claus Schedules Jobs on Unrelated Machines
4,535
We study a combinatorial problem arising from microarrays synthesis. The synthesis is done by a light-directed chemical process. The objective is to minimize unintended illumination that may contaminate the quality of experiments. Unintended illumination is measured by a notion called border length and the problem is c...
Hardness and Approximation of The Asynchronous Border Minimization Problem
4,536
Suppose we have n keys, n access probabilities for the keys, and n+1 access probabilities for the gaps between the keys. Let h_min(n) be the minimal height of a binary search tree for n keys. We consider the problem to construct an optimal binary search tree with near minimal height, i.e.\ with height h <= h_min(n) + D...
Optimal Binary Search Trees with Near Minimal Height
4,537
We present a new data structure called the \emph{Compressed Random Access Memory} (CRAM) that can store a dynamic string $T$ of characters, e.g., representing the memory of a computer, in compressed form while achieving asymptotically almost-optimal bounds (in terms of empirical entropy) on the compression ratio. It al...
CRAM: Compressed Random Access Memory
4,538
We show that for every fixed undirected graph $H$, there is a $O(|V(G)|^3)$ time algorithm that tests, given a graph $G$, if $G$ contains $H$ as a topological subgraph (that is, a subdivision of $H$ is subgraph of $G$). This shows that topological subgraph testing is fixed-parameter tractable, resolving a longstanding ...
Finding topological subgraphs is fixed-parameter tractable
4,539
Due to its optimality on a single machine for the problem of minimizing average flow time, Shortest-Remaining-Processing-Time (\srpt) appears to be the most natural algorithm to consider for the problem of minimizing average flow time on multiple identical machines. It is known that $\srpt$ achieves the best possible c...
Online Scheduling on Identical Machines using SRPT
4,540
Consider an optimization problem with $n$ binary variables and $d+1$ linear objective functions. Each valid solution $x \in \{0,1\}^n$ gives rise to an objective vector in $\R^{d+1}$, and one often wants to enumerate the Pareto optima among them. In the worst case there may be exponentially many Pareto optima; however,...
Pareto Optimal Solutions for Smoothed Analysts
4,541
We study sorting algorithms based on randomized round-robin comparisons. Specifically, we study Spin-the-bottle sort, where comparisons are unrestricted, and Annealing sort, where comparisons are restricted to a distance bounded by a \emph{temperature} parameter. Both algorithms are simple, randomized, data-oblivious s...
Spin-the-bottle Sort and Annealing Sort: Oblivious Sorting via Round-robin Random Comparisons
4,542
In a ground-breaking paper, Indyk and Woodruff (STOC 05) showed how to compute $F_k$ (for $k>2$) in space complexity $O(\mbox{\em poly-log}(n,m)\cdot n^{1-\frac2k})$, which is optimal up to (large) poly-logarithmic factors in $n$ and $m$, where $m$ is the length of the stream and $n$ is the upper bound on the number of...
Recursive Sketching For Frequency Moments
4,543
The celebrated dimension reduction lemma of Johnson and Lindenstrauss has numerous computational and other applications. Due to its application in practice, speeding up the computation of a Johnson-Lindenstrauss style dimension reduction is an important question. Recently, Dasgupta, Kumar, and Sarlos (STOC 2010) constr...
Rademacher Chaos, Random Eulerian Graphs and The Sparse Johnson-Lindenstrauss Transform
4,544
In this paper we study minimum cut and maximum flow problems on planar graphs, both in static and in dynamic settings. First, we present an algorithm that given an undirected planar graph computes the minimum cut between any two given vertices in O(n log log n) time. Second, we show how to achieve the same O(n log log ...
Improved Minimum Cuts and Maximum Flows in Undirected Planar Graphs
4,545
In this paper, we explore worst-case solutions for the problems of single and multiple matching on strings in the word RAM model with word length w. In the first problem, we have to build a data structure based on a pattern p of length m over an alphabet of size sigma such that we can answer to the following query: giv...
Worst case efficient single and multiple string matching in the Word-RAM model
4,546
Suppose we are asked to preprocess a string \(s [1..n]\) such that later, given a substring's endpoints, we can quickly count how many distinct characters it contains. In this paper we give a data structure for this problem that takes \(n H_0 (s) + \Oh{n} + \oh{n H_0 (s)}\) bits, where \(H_0 (s)\) is the 0th-order empi...
Counting Colours in Compressed Strings
4,547
Suppose we have just performed searches in a self-index for two patterns $A$ and $B$ and now we want to search for their concatenation \A B); how can we best make use of our previous computations? In this paper we consider this problem and, more generally, how we can store a dynamic library of patterns that we can easi...
Pattern Kits
4,548
We examine directed spanners through flow-based linear programming relaxations. We design an $\~O(n^{2/3})$-approximation algorithm for the directed $k$-spanner problem that works for all $k\geq 1$, which is the first sublinear approximation for arbitrary edge-lengths. Even in the more restricted setting of unit edge-l...
Directed Spanners via Flow-Based Linear Programs
4,549
Given a metric space on n points, an {\alpha}-approximate universal algorithm for the Steiner tree problem outputs a distribution over rooted spanning trees such that for any subset X of vertices containing the root, the expected cost of the induced subtree is within an {\alpha} factor of the optimal Steiner tree cost ...
Optimal Lower Bounds for Universal and Differentially Private Steiner Tree and TSP
4,550
This paper introduces a novel method for compact representation of sets of n-dimensional binary sequences in a form of compact triplets structures (CTS), supposing both logic and arithmetic interpretations of data. Suitable illustration of CTS application is the unique graph-combinatorial model for the classic intracta...
Non-Orthodox Combinatorial Models Based on Discordant Structures
4,551
We present two methods to compress the description of a route in a road network, i.e., of a path in a directed graph. The first method represents a path by a sequence of via edges. The subpaths between the via edges have to be unique shortest paths. Instead of via edges also via nodes can be used, though this requires ...
Compressed Transmission of Route Descriptions
4,552
Randomized algorithms are often enjoyed for their simplicity, but the hash functions used to yield the desired theoretical guarantees are often neither simple nor practical. Here we show that the simplest possible tabulation hashing provides unexpectedly strong guarantees. The scheme itself dates back to Carter and Weg...
The Power of Simple Tabulation Hashing
4,553
We present a new randomized algorithm for computing the diameter of a weighted directed graph. The algorithm runs in $\Ot(M^{\w/(\w+1)}n^{(\w^2+3)/(\w+1)})$ time, where $\w < 2.376$ is the exponent of fast matrix multiplication, $n$ is the number of vertices of the graph, and the edge weights are integers in $\{-M,...,...
Computing the diameter polynomially faster than APSP
4,554
Let $\xi$ be a random integer vector, having uniform distribution \[\mathbf{P} \{\xi = (i_1,i_2,...,i_n) = 1/n^n \} \ \hbox{for} \ 1 \leq i_1,i_2,...,i_n\leq n.\] A realization $(i_1,i_2,...,i_n)$ of $\xi$ is called \textit{good}, if its elements are different. We present algorithms \textsc{Linear}, \textsc{Backward}, ...
Testing of sequences by simulation
4,555
In this paper we introduce the concept of generalized d-graph (admitting cycles) as special dependency-graphs for modelling dynamic programming (DP) problems. We describe the d-graph versions of three famous single-source shortest algorithms (The algorithm based on the topological order of the vertices, Dijkstra algori...
Modelling dynamic programming problems by generalized d-graphs
4,556
In this work, we present a comprehensive treatment of weighted random sampling (WRS) over data streams. More precisely, we examine two natural interpretations of the item weights, describe an existing algorithm for each case ([2, 4]), discuss sampling with and without replacement and show adaptations of the algorithms ...
Weighted Random Sampling over Data Streams
4,557
Knuth [12, Page 417] states that "the (program of the) Fibonaccian search technique looks very mysterious at first glance" and that "it seems to work by magic". In this work, we show that there is even more magic in Fibonaccian (or else Fibonacci) search. We present a generalized Fibonacci procedure that follows perfec...
(α, β) Fibonacci Search
4,558
We present an efficient algorithm for finding all approximate occurrences of a given pattern $p$ of length $m$ in a text $t$ of length $n$ allowing for translocations of equal length adjacent factors and inversions of factors. The algorithm is based on an efficient filtering method and has an $\bigO(nm\max(\alpha, \bet...
String Matching with Inversions and Translocations in Linear Average Time (Most of the Time)
4,559
The present work analyzes the redundancy of sets of combinatorial objects produced by a weighted random generation algorithm proposed by Denise et al. This scheme associates weights to the terminals symbols of a weighted context-free grammar, extends this weight definition multiplicatively on words, and draws words of ...
Weighted random generation of context-free languages: Analysis of collisions in random urn occupancy models
4,560
In 2009, Roeglin and Teng showed that the smoothed number of Pareto optimal solutions of linear multi-criteria optimization problems is polynomially bounded in the number $n$ of variables and the maximum density $\phi$ of the semi-random input model for any fixed number of objective functions. Their bound is, however, ...
Lower Bounds for the Smoothed Number of Pareto optimal Solutions
4,561
In this note we present the worst-character rule, an efficient variation of the bad-character heuristic for the exact string matching problem, firstly introduced in the well-known Boyer-Moore algorithm. Our proposed rule selects a position relative to the current shift which yields the largest average advancement, acco...
On Tuning the Bad-Character Rule: the Worst-Character Rule
4,562
The capacitated vehicle routing problem (CVRP) involves distributing (identical) items from a depot to a set of demand locations, using a single capacitated vehicle. We study a generalization of this problem to the setting of multiple vehicles having non-uniform speeds (that we call Heterogenous CVRP), and present a co...
Capacitated Vehicle Routing with Non-Uniform Speeds
4,563
An approximate sparse recovery system in ell_1 norm formally consists of parameters N, k, epsilon an m-by-N measurement matrix, Phi, and a decoding algorithm, D. Given a vector, x, where x_k denotes the optimal k-term approximation to x, the system approximates x by hat_x = D(Phi.x), which must satisfy ||hat_x - x||_1 ...
Sublinear Time, Measurement-Optimal, Sparse Recovery For All
4,564
The visualization of any graph plays important role in various aspects, such as graph drawing software. Complex systems (like large databases or networks) that have a graph structure should be properly visualized in order to avoid obfuscation. One way to provide an aesthetic improvement to a graph visualization is to a...
Transforming a random graph drawing into a Lombardi drawing
4,565
This paper addresses the online exact string matching problem which consists in finding all occurrences of a given pattern p in a text t. It is an extensively studied problem in computer science, mainly due to its direct applications to such diverse areas as text, image and signal processing, speech analysis and recogn...
The Exact String Matching Problem: a Comprehensive Experimental Evaluation
4,566
We consider the minimum vertex cover problem in hypergraphs in which every hyperedge has size k (also known as minimum hitting set problem, or minimum set cover with element frequency k). Simple algorithms exist that provide k-approximations, and this is believed to be the best possible approximation achievable in poly...
Approximating Vertex Cover in Dense Hypergraphs
4,567
Bipartite Correlation clustering is the problem of generating a set of disjoint bi-cliques on a set of nodes while minimizing the symmetric difference to a bipartite input graph. The number or size of the output clusters is not constrained in any way. The best known approximation algorithm for this problem gives a fact...
An Improved Algorithm for Bipartite Correlation Clustering
4,568
Finding heavy-elements (heavy-hitters) in streaming data is one of the central, and well-understood tasks. Despite the importance of this problem, when considering the sliding windows model of streaming (where elements eventually expire) the problem of finding L_2-heavy elements has remained completely open despite mul...
How to Catch L_2-Heavy-Hitters on Sliding Windows
4,569
We consider the discrepancy problem of coloring $n$ intervals with $k$ colors such that at each point on the line, the maximal difference between the number of intervals of any two colors is minimal. Somewhat surprisingly, a coloring with maximal difference at most one always exists. Furthermore, we give an algorithm w...
Balanced Interval Coloring
4,570
The 2010 Workshop on Algorithms for Modern Massive Data Sets (MMDS 2010) was held at Stanford University, June 15--18. The goals of MMDS 2010 were (1) to explore novel techniques for modeling and analyzing massive, high-dimensional, and nonlinearly-structured scientific and Internet data sets; and (2) to bring together...
Computation in Large-Scale Scientific and Internet Data Applications is a Focus of MMDS 2010
4,571
The suffix tree is a very important data structure in string processing, but it suffers from a huge space consumption. In large-scale applications, compressed suffix trees (CSTs) are therefore used instead. A CST consists of three (compressed) components: the suffix array, the LCP-array, and data structures for simulat...
Lightweight LCP-Array Construction in Linear Time
4,572
We present new theoretical results on differentially private data release useful with respect to any target class of counting queries, coupled with experimental results on a variety of real world data sets. Specifically, we study a simple combination of the multiplicative weights approach of [Hardt and Rothblum, 2010] ...
A simple and practical algorithm for differentially private data release
4,573
For a given collection G of directed graphs we define the join-reachability graph of G, denoted by J(G), as the directed graph that, for any pair of vertices a and b, contains a path from a to b if and only if such a path exists in all graphs of G. Our goal is to compute an efficient representation of J(G). In particul...
Join-Reachability Problems in Directed Graphs
4,574
Consider the following problem: given a set system (U,I) and an edge-weighted graph G = (U, E) on the same universe U, find the set A in I such that the Steiner tree cost with terminals A is as large as possible: "which set in I is the most difficult to connect up?" This is an example of a max-min problem: find the set...
Robust and MaxMin Optimization under Matroid and Knapsack Uncertainty Sets
4,575
A problem studied in Systems Biology is how to find shortest paths in metabolic networks. Unfortunately, simple (i.e., graph theoretic) shortest paths do not properly reflect biochemical facts. An approach to overcome this issue is to use edge labels and search for paths with distinct labels. In this paper, we show tha...
Shortest Paths with Pairwise-Distinct Edge Labels: Finding Biochemical Pathways in Metabolic Networks
4,576
We propose a new method for defragmenting the module layout of a reconfigurable device, enabled by a novel approach for dealing with communication needs between relocated modules and with inhomogeneities found in commonly used FPGAs. Our method is based on dynamic relocation of module positions during runtime, with onl...
No-Break Dynamic Defragmentation of Reconfigurable Devices
4,577
Let G be an edge-weighted hypergraph on n vertices, m edges of size \le s, where the edges have real weights in an interval [1,W]. We show that if we can approximate a maximum weight matching in G within factor alpha in time T(n,m,W) then we can find a matching of weight at least (alpha-epsilon) times the maximum weigh...
Near approximation of maximum weight matching through efficient weight reduction
4,578
Suppose that each member of a set of agents has a preference list of a subset of houses, possibly involving ties and each agent and house has their capacity denoting the maximum number of correspondingly agents/houses that can be matched to him/her/it. We want to find a matching $M$, for which there is no other matchin...
Popular b-matchings
4,579
In this paper I have study to Reduce the time Complexity of Earliest Deadline First (EDF), a global scheduling scheme for Earliest Deadline First in Real Time System tasks on a Multiprocessors system. Several admission control algorithms for Earliest Deadline First (EDF) are presented, both for hard and soft real-time ...
An Algorithm to Reduce the Time Complexity of Earliest Deadline First Scheduling Algorithm in Real-Time System
4,580
Practical data structures for the edit-sensitive parsing (ESP) are proposed. Given a string S, its ESP tree is equivalent to a context-free grammar G generating just S, which is represented by a DAG. Using the succinct data structures for trees and permutations, G is decomposed to two LOUDS bit strings and single array...
A Searchable Compressed Edit-Sensitive Parsing
4,581
In a scheduling game, each player owns a job and chooses a machine to execute it. While the social cost is the maximal load over all machines (makespan), the cost (disutility) of each player is the completion time of its own job. In the game, players may follow selfish strategies to optimize their cost and therefore th...
Non-clairvoyant Scheduling Games
4,582
This paper studies the "explanation problem" for tree- and linearly-ordered array data, a problem motivated by database applications and recently solved for the one-dimensional tree-ordered case. In this paper, one is given a matrix A whose rows and columns have semantics: special subsets of the rows and special subset...
On Parsimonious Explanations for 2-D Tree- and Linearly-Ordered Data
4,583
We study the problem of maximizing constrained non-monotone submodular functions and provide approximation algorithms that improve existing algorithms in terms of either the approximation factor or simplicity. Our algorithms combine existing local search and greedy based algorithms. Different constraints that we study ...
Maximizing Non-monotone Submodular Set Functions Subject to Different Constraints: Combined Algorithms
4,584
A new approach to the static route planning problem, based on a multi-staging concept and a \emph{scope} notion, is presented. The main goal (besides implied efficiency of planning) of our approach is to address---with a solid theoretical foundation---the following two practically motivated aspects: a \emph{route comfo...
Multi-Stage Improved Route Planning Approach: theoretical foundations
4,585
The PDPTW is an optimization vehicles routing problem which must meet requests for transport between suppliers and customers satisfying precedence, capacity and time constraints. We present, in this paper, a genetic algorithm for multi-objective optimization of a dynamic multi pickup and delivery problem with time wind...
Multi-objective Optimization For The Dynamic Multi-Pickup and Delivery Problem with Time Windows
4,586
We show how to modify the linear-time construction algorithm for suffix arrays based on induced sorting (Nong et al., DCC'09) such that it computes the array of longest common prefixes (LCP-array) as well. Practical tests show that this outperforms recent LCP-array construction algorithms (Gog and Ohlebusch, ALENEX'11)...
Inducing the LCP-Array
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Two multivehicle routing problems are considered in the framework that a visit to a location must take place during a specific time window in order to be counted and all time windows are the same length. In the first problem, the goal is to visit as many locations as possible using a fixed number of vehicles. In the se...
Two Multivehicle Routing Problems with Unit-Time Windows
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A bicriteria approximation algorithm is presented for the unrooted traveling repairman problem, realizing increased profit in return for increased speedup of repairman motion. The algorithm generalizes previous results from the case in which all time windows are the same length to the case in which their lengths can ra...
Speedup in the Traveling Repairman Problem with Constrained Time Windows
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We introduce the first self-index based on the Lempel-Ziv 1977 compression format (LZ77). It is particularly competitive for highly repetitive text collections such as sequence databases of genomes of related species, software repositories, versioned document collections, and temporal text databases. Such collections a...
Self-Index Based on LZ77
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A mode of a multiset $S$ is an element $a \in S$ of maximum multiplicity; that is, $a$ occurs at least as frequently as any other element in $S$. Given a list $A[1:n]$ of $n$ items, we consider the problem of constructing a data structure that efficiently answers range mode queries on $A$. Each query consists of an inp...
Linear-Space Data Structures for Range Mode Query in Arrays
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We study the setting in which the bits of an unknown infinite binary sequence x are revealed sequentially to an observer. We show that very limited assumptions about x allow one to make successful predictions about unseen bits of x. First, we study the problem of successfully predicting a single 0 from among the bits o...
High-Confidence Predictions under Adversarial Uncertainty
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We develop a technique that we call Conflict Packing in the context of kernelization, obtaining (and improving) several polynomial kernels for editing problems on dense instances. We apply this technique on several well-studied problems: Feedback Arc Set in (Bipartite) Tournaments, Dense Rooted Triplet Inconsistency an...
Conflict Packing: an unifying technique to obtain polynomial kernels for editing problems on dense instances
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In this paper we consider methods for dynamically storing a set of different objects ("modules") in a physical array. Each module requires one free contiguous subinterval in order to be placed. Items are inserted or removed, resulting in a fragmented layout that makes it harder to insert further modules. It is possible...
Maintaining Arrays of Contiguous Objects
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The problem of storing a set of strings --- a string dictionary --- in compact form appears naturally in many cases. While classically it has represented a small part of the whole data to be processed (e.g., for Natural Language processing or for indexing text collections), more recent applications in Web engines, Web ...
Compressed String Dictionaries
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We consider the complexity of problems related to the combinatorial game Free-Flood-It, in which players aim to make a coloured graph monochromatic with the minimum possible number of flooding operations. Our main result is that computing the length of an optimal sequence is fixed parameter tractable (with the number o...
The complexity of Free-Flood-It on 2xn boards
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We consider the complexity of problems related to the combinatorial game Free-Flood-It, in which players aim to make a coloured graph monochromatic with the minimum possible number of flooding operations. Although computing the minimum number of moves required to flood an arbitrary graph is known to be NP-hard, we demo...
The complexity of flood-filling games on graphs
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Dynamic graphs have emerged as an appropriate model to capture the changing nature of many modern networks, such as peer-to-peer overlays and mobile ad hoc networks. Most of the recent research on dynamic networks has only addressed the undirected dynamic graph model. However, realistic networks such as the ones identi...
Random Walk on Directed Dynamic Graphs
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A binary matrix satisfies the consecutive ones property (COP) if its columns can be permuted such that the ones in each row of the resulting matrix are consecutive. Equivalently, a family of sets F = {Q_1,..,Q_m}, where Q_i is subset of R for some universe R, satisfies the COP if the symbols in R can be permuted such t...
Consecutive Ones Property and PQ-Trees for Multisets: Hardness of Counting Their Orderings
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