| license: cc-by-4.0 | |
| pretty_name: TrialDesignBench Source | |
| configs: | |
| - config_name: default | |
| data_files: | |
| - split: train | |
| path: data/tdr.csv | |
| # TrialDesignBench Source | |
| CSV index of clinical trials with linked protocol and SAP PDFs under `documents/<row_id>/`. | |
| ## Bulk download from AACT | |
| `download_ctgov_prot_sap.py` downloads protocol and SAP PDFs in bulk from an [AACT](https://aact.ctti-clinicaltrials.org/) static dataset dump. It reads `<aact_dir>/provided_documents.txt` and saves each PDF to `documents/<nct_id>/<original-filename>.pdf`. | |
| ```bash | |
| pip install pandas requests tqdm | |
| python download_ctgov_prot_sap.py /path/to/aact_pipe_delimited_dump | |
| ``` | |
| Useful flags: `--output-dir`, `--limit N`, `--full` (re-download existing), `--include-icf` (also fetch ICF-only rows). | |
| Example output (already in `documents/`): | |
| - `documents/NCT03254108/Prot_000.pdf`, `documents/NCT03254108/SAP_001.pdf` — separate protocol and SAP | |
| - `documents/NCT03521102/Prot_SAP_001.pdf` — combined protocol + SAP | |