Split (3)

train · 3.75M rows

chrom stringclasses 414 values	start int64 1 249M	end int64 45 249M	N1 int64 0 240	N2 int64 0 240	group int64 0 3	ID stringlengths 16 39	loci stringlengths 2 23 ⌀	TE_chrom stringclasses 24 values	TE_start float64 10k 249M ⌀	TE_end float64 10.4k 249M ⌀	strand stringclasses 2 values	family stringlengths 2 15	subfamily stringclasses 111 values	class stringclasses 13 values	__index_level_0__ int64 2 4.69M	sequence stringlengths 11 500k
chr1	165,007	165,310	2	238	3	chr1:165007-165310	AluSx1_dup27	chr1	165,007	165,310	+	AluSx1	Alu	SINE	68,461	CCAAGTGCAGTGACACACCCATAATCCCAAGCACTTTGGGAGGCTGAGGCGGGTGAATCTCCTGAAGTCAGGAGTTCAAGGCCAGCCTGGCCAACATGGTGAAACCCCAACTCTACTACAAATACAAAAATTAGGCAGGCGTGGTGGCAGAGGCCTGTAATCCCAGCTACTTAGGAGGCTGAGGCAGGGAGAATTGCTTGAACACAGGAGGTGAGCTTGCCATGAGCTGAGATCATACCACTGCACTCCAGCGTGCGTGACAGAACAAAACTTCAACCTCCAAAAAAAAAAAAAAAAAAAAAAA
chr1	166,056	166,334	4	210	3	chr1:166056-166334	AluSx1_dup28	chr1	166,056	166,334	+	AluSx1	Alu	SINE	68,754	GGCTGGGCACAGTGGCTCACACCTGTAATCCCAGCAGTTTGGGAGGCCGAGGCAGGCAGATCATGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTAAAACCCCGTCTGTACTAAAAGTACAATAATTAGCTGGGCATGGTGGCAGGCACCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCCTGAACCCAGGAGGTGGAGGTTGCAGAAACCATTATCACGCCACTGCATTCCAGCCTGGGCAAGAGAGCAAGATTCTGTCTC
chr1	166,368	166,501	75	92	0	chr1:166368-166501	MIRb_dup34	chr1	166,368	166,501	null	MIRb	MIR	SINE	68,845	TGGCCACGTCTCTTCTCCTGTCTGAGCTTTAGTATCCTCTTTTGTGGTCATGAGAACTGAAGATCTGTCCCGAAGATTTGATAAGATAGTAAAGTGCTTCACATAATACCAGACATATAAATACACAGTAAATG
chr1	167,134	167,433	18	221	3	chr1:167134-167433	AluSp_dup13	chr1	167,134	167,433	null	AluSp	Alu	SINE	69,059	CTGGGCGTGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGCAGATATCTAGGTCGGGAGTTCGAGACCAGCCTGACCAACATGGAGAAACCCCGTCTCTACTAAAAATACAAAATTAGACGGGTGTGGTGGCGCATGTCTGTAATCCCAGCTATTCGGGAGGCCAAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAGTGAGGCGAGGTTGGCACCATTGCACTGTAGCCTGGGCAAAAAGAGCAAAACTCCATCTCAAAATAAATAAATAAATAAAA
chr1	167,495	167,792	29	211	3	chr1:167495-167792	AluSg7_dup5	chr1	167,495	167,792	+	AluSg7	Alu	SINE	69,175	GGCCAGGCATGGTGGCTCACACCTATAATCCCAGCACTTTGGGAGGCTGAGGTGAGTGGATCAGGAGGTCAGCAGTTCAAGACCAGCCTAGCCAAGATCATGAAACCCCGTCTCTACTAAAAATACAAAAATCAGCCAGGCGTGGTGGCTGGTGCCTGTAATCCTAGCTGCTCGGGAGGCTGAGGCAGAGAACTGCTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCCGAGATCGTGCCACTGCACTCCAGCCTGGGCGACAGAGTGAGGCTCCGTCTCAAAAAAAATAAATAAATAA
chr1	168,485	168,786	31	209	3	chr1:168485-168786	AluYh3	chr1	168,485	168,786	+	AluYh3	Alu	SINE	69,470	GCCGGGTGCAGTGGTGCAGGCCTGTAATCCCAGCACTTTGGCAGCAGAGGCAGGCGGATCACTTTGAGCTCAGGGCAACATAGCCAAAACCCCCCTCCCTAGCCCCACCCCCACCCCGTCCCTACCAAAAATACAAAACAGCAGGGCATGGTGGCGGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACCTGAACCCAGGAGGCAGACATTGCAGTGAGCCAAGATCACGCCACTGCCAGCCTGGATGACAGAGCAAGACTCCACCTCAAAAAAAACAAAAACAAAAA
chr1	168,915	169,342	131	3	1	chr1:168915-169342	MLT1D_dup7	chr1	168,915	169,342	+	MLT1D	ERVL-MaLR	LTR	69,613	TGTAGCAGGCTGATGCCCCCAAGATGCCCATATCCTAATCCCGGGAACTAGTGAACATGACCTTATATGGCAAAAGGAACTTTGCAGATATAATGAAGTTAAGGGTCTTTGGCTTTTGGGGTTGATGTACTCACTCGGATCCTTGTAAGAGCAGAGCAGGTGATGGAGAGGGTGGGAGGTGTAGTGACAGAAGCAGGAAACTCCAGTCATTCGAGACGGGCAGCACAAGCTGCGGAGTGCAGGCCACCTCTACGGCCAGGAAACGGATTCTCCCGCAGAGCCTCGGAAGCTACCGACCCTGCTCCCACCTTGACTCAGTA...
chr1	169,374	169,679	28	211	3	chr1:169374-169679	AluSz_dup28	chr1	169,374	169,679	+	AluSz	Alu	SINE	69,729	GGCTGGGCTCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGATGGGTGGATCACTTGAGGTCAGGAGTTCGAGACCAGCCCAGCCAACATGGTGAAATGCCATCTATACAAAAAATACAAAAACTAGCCGGGCATGGTGGCACATGCCTGTAATCTCAGCTACTCAGGAGGCTGAGACAGGAGAATTGTTTGAACCCAGGGGGGCAGAGGTTGCAGTGAACTGAGATTCCACCACTGCACTCCAGCCTGGGTGACAGAGCGACGCTCCATCTCGAAAACAAAACAAAACAAAAAAA
chr1	169,857	170,149	29	211	3	chr1:169857-170149	AluSz6_dup10	chr1	169,857	170,149	null	AluSz6	Alu	SINE	69,859	GCTGGGTGCAGTGGCTCACTCCTATAATAGCAGCACTTTGCGGGGCTGAGACAGGTGGACTACTTGAGGCAAGGAGTTCGAGTCCAGCCTGGGCAACATGGCAAAACCGCATCTCTACTAGAAATACAAAAATTAGCTAGGCATGCTACACTCCTGTCATCCCAGCTACTCAGGAGACTGAGGCAGGAGAATCACTTGAACTGGGGAGGCAGAGGTCGAAGTGAGCCGAGATTGTGCCCCTGCACTCCAGTCTGGGAGACAGAGTGAAACTGGCCTCAAAAAAAAAAAAAGAA
chr1	170,894	170,935	19	63	0	chr1:170894-170935	Charlie4z	chr1	170,894	170,935	+	Charlie4z	hAT-Charlie	DNA	70,155	TGGGCCCTTAGGGAGGTGTGAGCCCCCTGAAAGGATGCAAGG
chr1	170,936	171,236	15	203	3	chr1:170936-171236	AluSq2_dup23	chr1	170,936	171,236	null	AluSq2	Alu	SINE	70,174	GGCCAAGCACAGTGGCTGATGTGATCCCAGAACTTTGGGAGGCGGAGCCAGTCGGATCACCTGAGGTCAGGAGTTCAAGACCAGCCTGCCCAACATGGCGAAACCCTGTCTCTACTAAAAATACAAAAAATTAGCCAGGCGTGGTGGCAGCCACCTGTAATCCCAGCTACTCCAGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCGCAGGTTGTAGTGTGGTGAGATCACGCCACTGCACTCCAGCCTGGGCGACAGGAGCGAAACTCTGTCTCAAAAAACAAAACAAAACAAAA
chr1	171,237	171,337	98	50	0	chr1:171237-171337	Charlie4z_dup1	chr1	171,237	171,337	+	Charlie4z	hAT-Charlie	DNA	70,249	ACGATGAAAGGTTTTGTGTGGAGAGCATGTACATGCCTTTCTGGGAAAACAGTCCACAGCTCTTATTCTCAGCAGGCTTCACGGTGAAAAAAGGTTAGAAC
chr1	172,096	172,146	18	132	0	chr1:172096-172146	AluSq2_dup24	chr1	172,096	172,146	null	AluSq2	Alu	SINE	70,514	CCAGCCTGTGTGACAAGAGCGAAACTCCGTCTCCAAAACAAAAACAAAAAA
chr1	172,408	172,489	39	26	2	chr1:172408-172489	MIR1_Amn_dup2	chr1	172,408	172,489	null	MIR1_Amn	MIR	SINE	70,578	CTGGTCTGGGGCATTGGGCAAGGCTGTTGCACTTCTCTGATCCCATTTCCCCATCTGGAAAGTGCGCTGATTGTATCTCCCT
chr1	172,833	172,913	162	8	1	chr1:172833-172913	MIRb_dup35	chr1	172,833	172,913	null	MIRb	MIR	SINE	70,700	AGGGTGGTCCAGGGGCTAGGGCAGGGACTTTGGAGTCACGCCGTTGGCTTTGAATCCAGACTCCTACACTTGGTAGCTGTG
chr1	174,382	174,517	19	218	3	chr1:174382-174517	AluSz_dup29	chr1	174,382	174,517	+	AluSz	Alu	SINE	71,131	GGCCAGGCATGGTGGTTCATGCCTGTAATTCCAACAGTTTGGGAGGCCAAGGCAGGCAGATAACTTGAGGTCAGGAATTCGAGACCAGCCTGGCCAACAGAGTGAAACCCTCTCTCTACTAAAAATACAAAAATTA
chr1	174,518	174,820	28	210	3	chr1:174518-174820	AluSp_dup14	chr1	174,518	174,820	+	AluSp	Alu	SINE	71,165	GGCCAGGAGTGATGGCTCACGCCTGTGATCCCAGCACTTTGAGAGGCCGAGGCGGGTAGATCACCTGAGGTCAGGAGTTTGAGACCAGCCTAACCAACATAGGGAAACCCCGTCTCTACTAAAACTACAACATTAGCCGGGTGTGGTGGCACATGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCCCTTGAACCCAAAAGGCAAAGATTGTGGTGAGCCGAGATTGTGCCATTGCACTCCAGCCTGGGCAAAAACAGCGAAACTCCGTCTCAAAAAAAAAAAAAAGAAAAAA
chr1	174,821	174,957	27	211	3	chr1:174821-174957	AluSz_dup30	chr1	174,821	174,957	+	AluSz	Alu	SINE	71,243	TTAGCCAGGCATGGTGAAGTTGCAGTGAGCTGAGACTGCACCATTGCACTCCAGCCTGGGTAGCAGAGCAAGACCCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAAAGAAAGAAAGA
chr1	175,597	175,891	29	211	3	chr1:175597-175891	AluSp_dup15	chr1	175,597	175,891	null	AluSp	Alu	SINE	71,450	GGCTAGGCATGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCAAGGTCAGTGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGACCAATATGGAGAAACCCTGTCTCAACTGAAAATACAAAATTAGCCAGGCGTGGTGGTGCATGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGAAGGAGAATTGCTTGAACCCAGGGGGCAGAGATTGCAGTGAGCTGAGATCGCACCATTGCACTCCAGCCTGGGCAACGAGCAAAACTCTGTCTCAAAATAAAAAAAAGA
chr1	175,915	176,202	25	200	3	chr1:175915-176202	AluSx1_dup29	chr1	175,915	176,202	+	AluSx1	Alu	SINE	71,525	GCCAGGCGCGGTGGCTCATGCCTATAATCCCAGCACTTTGGGAAGCCAAGGCAGGTGGATCACTTGACGTCAGTAGTTTGAGACCAGCCCGGGCAACATGTTGTAACCCCATCTCTACTAAAAATATATTTTAAAAATTAGCTGGGCATGGTGGTGGGCACCTGTAATCCCAGCTTCTCAGGAGGCTGAGGCAGGAGAACCACTTGAACCTGGGAGGTGGAGGTTGCAGTGAGCGGAGATCACGCCACTGCACTCTAGCCTGGGTGACAATAGAAAGACTCCATCTCA
chr1	176,232	176,248	2	56	0	chr1:176232-176248	AluSx1_dup30	chr1	176,232	176,248	+	AluSx1	Alu	SINE	71,595	AACCACTAAAAAAAAGA
chr1	176,379	176,445	116	59	0	chr1:176379-176445	MIRb_dup36	chr1	176,379	176,445	null	MIRb	MIR	SINE	71,631	GGTCCAATCAAATAACATTCTCTGAGCCTGTTTCTTTAGCTGTGAAAGAAGAATAACATACCCATCT
chr1	178,685	178,904	34	164	0	chr1:178685-178904	MER58A_dup3	chr1	178,685	178,904	+	MER58A	hAT-Charlie	DNA	72,207	CAGGGTGTGGCAAACTACCATGCATGGACCATGTCTGACACAGTCTGCATTTGTAAGTAAAGTTGTAATGGGACACAGCCAATACATGTGTTACATAATGTCTCTGGCTACTTTCATGGTATAATGGAAGAGCTGAGTCATTGAGAGAGAGACCATATGGCTTGGAAAACTTAAAATATTTAACATTTAGCCCCCTGCAGAAAATACTTGCTGACTCTTG
chr1	178,987	179,306	27	119	2	chr1:178987-179306	L2c_dup28	chr1	178,987	179,306	+	L2c	L2	LINE	72,287	GCCCTGCTTCTATATCCAGCCTCATCTATTTCTGCTCCTCCTCCTTATTTTCCTTCTGGCCATGCTGATGGATTGTCAGCTTCCCAGATGTGCAAGAATCTCTCCTCCCTTCCCAACATTCTCATGCTCTCCCTCTGCCTCTGAAGAACTTCCTGCCCCATCTCTCATGACAAATCCTTTCTACATTCTTTAAGATGCAGCCCCTTTGCTCCTTCCTTAAGGATGTCTGTCTGGCTCTATTTTGGGTGACGTGCTCCTTCTGCATCTCCCAGAGCCAGCCTGTGTGTGTCAGCTACAACATTTCTTTGCATCTCTGTGTC
chr1	182,024	182,194	139	39	0	chr1:182024-182194	L1MC5a_dup10	chr1	182,024	182,194	null	L1MC5a	L1	LINE	73,027	TCACCTGTTAGACTGGCAAAAATCCAAAAGTAAACACTTTGTGGAGAAACAGGCATTCCTAGACATTGCTGGTGGGATACAGAACAGTACAATTCTGATAGTAATCAGTTAACAAATTAAACATATTTATTTTATACTTTTAAACCCAGGAATCCCATATTTAGGAGCCTA
chr1	182,197	182,299	152	28	0	chr1:182197-182299	MER5B_dup3	chr1	182,197	182,299	null	MER5B	hAT-Charlie	DNA	73,067	CAGTCATTCTCAACACCGGCCATGCAGCAAAATCATCAGTGGAAATTTAAAAAAATACACATGGCCAGGCCCCAGCCCAAATCACTAATAAGAATCTCCAGGG
chr1	185,786	185,876	60	9	0	chr1:185786-185876	MIR3_dup14	chr1	185,786	185,876	null	MIR3	MIR	SINE	73,835	TGAGCTTGTACCCAGCGCTGCTTTTGCCTTGCTCTGTGACCCCAGGCAAGCTGCCTCACCTCTCTGGGCCAGTTTCCCCATCGTACAGTGG
chr1	189,430	189,571	157	14	1	chr1:189430-189571	L2a_dup44	chr1	189,430	189,571	+	L2a	L2	LINE	74,695	CCTCACCTGCTTCCATCCTCCCTGGTGTGGGGTGGGCCCAGTGATATCAGCTGCCTGCTGTTCCCCAGATGTGCCAAGTGCATTCTTGTGTGCTTGCGTCTCATGGAACGCCATTTCCCCAGACATCCCTGTGGCTGGCTCC
chr1	190,495	190,928	192	14	1	chr1:190495-190928	L3_dup8	chr1	190,495	190,928	+	L3	CR1	LINE	74,932	AGACTGGGGAGGGACAAAGGCTGCTCTGTCCTGGTGCTCCCACAAAGGAGAAGGGCTGATCACTCAAAGTTGCGAACACCAAGCTCAACAATGAGCCCTGGAAAATTTCTGGAATGGATTATTAAACAGAGAGTCTGTAAGCACTTAGAAAAGGCCGCGGTGAGTCCCAGGGGCCAGCACTGCTCGAAATGTACAGCATTTCTCTTTGTAACAGGATTATTAGCCTGCTGTGCCCGGGGAAAACATGCAGCACAGTGCATCTCGAGTCAGCAGGATTTTGACGGCTTCTAACAAAATCTTGTAGACAAGATGGAGCTATG...
chr1	191,054	191,252	89	17	0	chr1:191054-191252	Plat_L3_dup1	chr1	191,054	191,252	+	Plat_L3	CR1	LINE	75,039	CAAGATGAAATTTACAAGGAACAAATGTGAAGCCCAACATTTAGGTTTTAAAAATCAAGCGTATAAATACAGAAGGTGGAGGGAACTTGCTTTAGACACAGTTCAGGTGAAGAAAGACCTGGAAACTTCTGTTAACTATAAGCTCAGTAGGGGCTAAAAGCATGTTAATCGGCATAAAAAGGCAATGAGATCTTAGGGT
chr1	193,650	193,865	187	17	1	chr1:193650-193865	MIR_dup29	chr1	193,650	193,865	null	MIR	MIR	SINE	75,512	ACCTTGGAGTTGATGCCTTGGCTCAGATCCAGCTCCCCTGTTTTCTTCCTCTGTAACCTTGGGCAACCCAACCCCTCTAAGCCTCGGTGTTCTCATTTGTGAAGTTGTGGTAATAATGGTAGCTTCCTGGTAGAATTATTGTAAATATTAAATTAATCAAAACATGCAAAGGAATGGAACAGTGCCTGGCACCTAGGAAGCCTTCAGGAAATGCTG
chr1	194,331	194,563	41	37	2	chr1:194331-194563	L2a_dup45	chr1	194,331	194,563	+	L2a	L2	LINE	75,650	CTGCACCCCTCCAGCTCGCCTCCCTCAATGGCCACTCCGTGCTCCAGCCATGCTGGCTTCCTTTTAGGTCCTCCACCTCCAGGCTGTAGTTCATGTGCTTCTTTCTGGAATGTTCTTCCCAACCCACCCACTCAACCCTCAGACTTTACCATAAATGTCATTTCCTCACATCTGCCTTCCCTGACCTGAGACCAAGCCAGGCTTCCCATGACGAGCCTCACAGTACCCCATCT
chr1	194,590	194,726	180	35	0	chr1:194590-194726	MIR_dup30	chr1	194,590	194,726	+	MIR	MIR	SINE	75,699	ACGTAACCCGGGGCCATGATCTATGGCTTTGAATCCTGGCTCTGTCACTAGGCCAGGTCTCTCAGCCTTTCTGTGCCTCAGTTTCCTCATCTATAAAATGAGATGACGGCAGTGCCTGCTCATGAAGTGTGAGTTAA
chr1	194,783	194,973	194	13	1	chr1:194783-194973	L2a_dup46	chr1	194,783	194,973	+	L2a	L2	LINE	75,742	TTATCAATAGACCTTGTCACAACTGTTATTGAAGAACTAATCATCTATTGCTTATTTAGGTCTTTCTCTCCTGCCAGAATGTGCGCTCCAGGTGGAGAGGTATGTTGCCTTATCCATGGCTGGATATATAGAGATTCCCACACTGCCTTGCACACGAGCACTGCTGGGTAAATATTTGTTGGCTGCAGGAA
chr1	196,883	196,934	200	19	1	chr1:196883-196934	MIR1_Amn_dup3	chr1	196,883	196,934	+	MIR1_Amn	MIR	SINE	76,118	TTTCTGTGCCTCAGTTCTCCCATATGTAAGATCACAAAGGGGGTAAAGATGC
chr1	197,096	197,166	174	12	1	chr1:197096-197166	L2c_dup29	chr1	197,096	197,166	null	L2c	L2	LINE	76,156	GTGTCTTATTCGTCTTTGTTGTGATCATGGTCTGCACCTAACAGATGATCAGTAGATGTTTGCAGACAGAA
chr1	197,313	197,576	30	210	3	chr1:197313-197576	AluSp_dup16	chr1	197,313	197,576	+	AluSp	Alu	SINE	76,200	GGCCGGGCGCAGCGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCGAAGGCAGGCAGATCACCTGAGGTCGGGAGTTCGAGACCAGTCTGACCAACATGGTGAAACTCCATCTCTACTAAAAATACAAAATTAGCCAGGCGTGGTGGTGCATGCCTGTAATCCCCGCTACTCGGGAGGCTGAGGAAGGAGAATCACTTGAACCAGGGAGGTGGAGGTTGCAGTGTGCCAAGATCGCGCCATGGCACTCCAGCCTAGGCAACA
chr1	197,578	197,644	30	13	2	chr1:197578-197644	L2c_dup30	chr1	197,578	197,644	null	L2c	L2	LINE	76,249	TTTGTTCAAGCTGTTTCTTTTACCTGGAATGCTGTCTTTGCACCTTCTTCCTGGACCTGGTTCACCC
chr1	197,791	198,040	98	11	0	chr1:197791-198040	MER33_dup1	chr1	197,791	198,040	+	MER33	hAT-Charlie	DNA	76,283	GAAATCCTTAGACCTGTGCTGTCCAATATGGTAGCCACCAGGCACATGCAGCCACTGAGCACTTGAAATGTGGATAGTCTGAATTGAGATGTGCCATAAGTGTAAAATATGCACCAAATTTCAAAGACTAGAAAAAAAGAATGTAAAATATCTTATTATTTTATATTGATTACATGCTAAAATAACCATATTTGGGATATACTGGATTTTAAAAATATATCACTAATTTCATCTGTTTCTTTTTACTTTT
chr1	198,355	198,532	63	28	0	chr1:198355-198532	MIRc_dup13	chr1	198,355	198,532	null	MIRc	MIR	SINE	76,372	ACAACAAAACATATCAATAACAAAAAGCTTGGAATTCAGACGACAGATCCAAGTCTGGGCTTGATCTCAAGCTAGTGTTTTGATGTTGAAAAAATGTTATTTGGTCTTTCTAACCCCATTTCCTTATGTAAAATAGGGGATGATGATAAATTCACTGATAATAAGAGTTAAATGAGAT
chr1	200,409	200,714	36	200	3	chr1:200409-200714	L1MB3_dup9	chr1	200,409	200,714	+	L1MB3	L1	LINE	76,723	TAAATAGAGAAGCCAGACGCAAAACTACAGATATCGTATGAGTCCAGTTTTGTGAAGTGCCTAGAATAGTCAAAATTCACAGAGACAGAAGCAGTGGTCGCCAGGAATGGGGAAGCAAGGCGGAGTTGGGCAGCTCGTGTTCAATGGGTAGAGTTTCAGGCTGGGGTGATGGAAGGGTGCTGGAAATGAGTGGTAGTGATGGCGGCACAACGGTGTGAATCTACTTAATCCCACTGAACTGTATGCTGAAAAATGGTTTAGACGGTGAATTTTAGGTTATGTATGTTTTACCACAGTTTTTAAAAA
chr1	200,857	201,046	143	46	0	chr1:200857-201046	MER53_dup1	chr1	200,857	201,046	null	MER53	hAT	DNA	76,806	TAGGGTGGCCAGAGGCAGCAAATAAAATATAAAATGCTTAATTCTGAATCTCAGATAAACAACCAATAATGTTTTTTAGCATAAGTATGTCCCAAACTAAGCTTGGGACATATTTACGCTACGAAATTATTCGTTGTTTATCTAAAATTCAAACTAGCTGGGCATCCTGTCTTTTAATCTGGCAACCCTA
chr1	201,480	201,651	39	70	2	chr1:201480-201651	MLT1A_dup3	chr1	201,480	201,651	+	MLT1A	ERVL-MaLR	LTR	76,916	GTCTTTTCCCACCAAGTGAGGATGCGAAGAGAAGGTGGCTGTCTGCAAACCAGGAAGAGAGCCCTCACCGGGAACCCGTCCAGCTGCCACCTTGAACTTGGACTTCCAAGCCTCCAGAACTGTGAGGGATAAATGTATGATTTTAAAGTCGCCCAGTGTGTGGTATTTTGTT
chr1	201,813	201,955	37	59	2	chr1:201813-201955	MIRc_dup14	chr1	201,813	201,955	+	MIRc	MIR	SINE	76,973	GGCTCTGCTATTCATTCTTTGTGTGACCCTGGGCAAGCCATGAATGGAGCTTCAGTCACCCCATTTGTAATGGGATTTAATTGTGCTTGCCCTGCCTCCTTTTGAGGGCTGTAGAGAAAAGATGTCAAAGTATTTTGTAATCT
chr1	201,956	202,252	37	203	3	chr1:201956-202252	AluJo_dup21	chr1	201,956	202,252	+	AluJo	Alu	SINE	77,003	GGCTGGGCGTGGTGGCTCATGCCTGTAATCCCAGCACTTTGGTAGGCTGACGCGAGAGGACTGCTTGAGCCCAAGAGTTTGAGATCAGCCTGGGCAATATTGTGAGATTCCATCTCTACAAAAATAAAATAAAATAGCCAGTCATGGTGTCACACACCTGTAGTCCCAGCTACATGGGAGGCTGAGGTGGGAGGATCACTTGAGCTTGGGAGATCGAGGCTGCAGTGAGCTATGATTGTACCACTGCACTCCAGGCTGGGCGACAGAGAGAGACCCTGTCTCAGAAAAAAAAAAAAA
chr1	202,253	202,273	28	212	3	chr1:202253-202273	MIRc_dup15	chr1	202,253	202,273	+	MIRc	MIR	SINE	77,065	GTACTTGGTAATCTGTAAGGT
chr1	203,361	203,557	62	173	0	chr1:203361-203557	MIR_dup32	chr1	203,361	203,557	+	MIR	MIR	SINE	77,260	CAGGAGAGCATAGTGGTTACTAGGAAGGGAAGGACTTTGGGACTAGACTGCCTCGGCTGGAGTCCTCTTTCTGCTTCATAGCCACGTGATCCTAGGCATGTTACCTGTGCCTCAGTTTTCACTCTATCAATATGTAATAACTGCATCTGTCTTTGTGGTGAGGATTCAGTGAGTTAACATATTTGAAGTGCTTAAAA
chr1	203,984	204,027	20	220	3	chr1:203984-204027	Alu_dup1	chr1	203,984	204,027	+	Alu	Alu	SINE	77,355	GACCAGACGTGGTTGCTCACACCCATAATCCCAACACTTTGGAA
chr1	204,045	204,557	17	220	3	chr1:204045-204557	L1PA6_dup4	chr1	204,045	204,557	null	L1PA6	L1	LINE	77,361	GGGTATATACCCAAAGGATTATAAATCGTGCTACTATAAAGACACATGCACATGTATGTTTATTGTGGCAGTATTCACAATAGCAAAGACTTTGAACCAACCCAAATGTCCATCAATGACAGACTGGATTAAGAGAATGTGGCACATATATACCATGGGATACCATGCAGCCATTAAAAAGGATGAGTTCATGTCCTTTGCAGGGACATGGATGAAGCTGGAAACCATCATTCTGAGCAAACTATCACAAAGACAGAAAACCAAACACTGCATGTTCTCACTCACAGGTGGGAATTGAACAATGAGAACGCTTGGACATG...
chr1	204,967	205,076	142	82	0	chr1:204967-205076	L2c_dup31	chr1	204,967	205,076	null	L2c	L2	LINE	77,492	TGCTGCTTCAAGTTGCTGGAATGCTTGTAACCCTGCCCTGCTTCACCAGGGTAACTCCTACTTGGCCTTTAAGTTTATCTCTGCTGTCACACCGTCCAGAAAGCCTTCTC
chr1	205,733	205,881	169	31	0	chr1:205733-205881	MIRb_dup38	chr1	205,733	205,881	null	MIRb	MIR	SINE	77,618	ACCTTGGGCAAGTTCTTAAACCCTTCAAAGCCTCATTTTTCTCCAATCATAAAAGGGAAAGATGGTAATATTTTCCCCGCCAAATTCTTGTAAGTATTAAACATTGTATATGTATTTTGAACACGATTAAGCTCTAAACACTTGTTAGG
chr1	205,883	206,015	29	211	3	chr1:205883-206015	AluJr_dup27	chr1	205,883	206,015	+	AluJr	Alu	SINE	77,643	GGCCAGGTGCAGTGGCTCATGTCTATAATCCCAACACTTTGGGAGGCTAAGGTGGGAGGATCGCTTGAGGCCAGGAGTTCAAGACCAGCCTGAGCAACATAGTGAGACTTTGTCTCTATAAAAAATAAATAAA
chr1	207,563	207,666	182	29	0	chr1:207563-207666	Charlie5_dup1	chr1	207,563	207,666	+	Charlie5	hAT-Charlie	DNA	77,914	TGATACTCCATCCAGTTACCAGAAAACATTTAGGTATGTGTGAGACAACTTGGGTATGTGAACCTACCTTTTCAATGTAAATTCAGTGAAATCTAAGTACAGAT
chr1	257,678	257,745	1	239	3	chr1:257678-257745	MLT2B3_dup1	chr1	257,678	257,745	null	MLT2B3	ERVL	LTR	85,023	TGACGGTTAATTTTAGACATCTACTTGATCGGATTGAGAGACACACATAGCTGGTCAAACACGATTTC
chr1	257,771	257,838	1	239	3	chr1:257771-257838	MLT2B3_dup2	chr1	257,771	257,838	null	MLT2B3	ERVL	LTR	85,037	TGATGGTTAATTTTAGACATCTACTTGAGTGGATTAAGAGACACACATAGCTGGTCAAACACAATTTC
chr1	257,864	257,931	1	239	3	chr1:257864-257931	MLT2B3_dup3	chr1	257,864	257,931	null	MLT2B3	ERVL	LTR	85,054	TGATGGTTAATTTTAGACATCTACTTGACTGGATTAAGAGACACACATAGCTGGTCAAACGTGATTTC
chr1	257,957	258,024	1	239	3	chr1:257957-258024	MLT2B3_dup4	chr1	257,957	258,024	null	MLT2B3	ERVL	LTR	85,071	TGATGGTTAATTTCAGACATCTACTTGATCGGATTGAGAGACACACATAGCTGGTCAAACACGATTTC
chr1	258,028	258,474	1	239	3	chr1:258028-258474	MER31-int	chr1	258,028	258,474	+	MER31-int	ERV1	LTR	85,080	TATTTATGCCTGATTCATGGCTGAAATTTCAGGATGAAAGCTATGAAATCTCTATTTGTGTTTGTGTATCTATTAATGTATGTTATGTATATGTGATATTTTCTTAACTCCAGAGAGCATTGCAAAATTCATTTATGAAAACCTCTAAAAGTGCTCTATTCTAACTTGGCTTGGAAAAAAATAAGCATTTATAAATAAATATTCACCAAACTCCTAGAAATATAGGAACTGATCAAATGTTTCTTAAGTTAACATGATTTGGATAAAACTTAGTTAAATAAGATTAATATAGTATTTTTGGTGTAATAAAACAACTATAT...
chr1	259,038	259,589	4	236	3	chr1:259038-259589	MER92-int	chr1	259,038	259,589	+	MER92-int	ERV1	LTR	85,213	GAAAAACATTATTTCAAAAATAATTTGTTTACAGTAAATCTGCCTAAGAATAGTTTCCAAAGTACTTTTGGTAATTTTTAACCTTAAAGTTAAGCTAAGTAAAAGATTTGCATTAAATATCTAGACCATTTATAAATAAGATACAATACTAAAACATTAATTACTGAACATAAATAATTCAAGTTTATATACTTTTGGCTTCCTGTTTTTACAGAGAGACTAAAGATATTTTGGCCCGTTAATAAACATGTTTTTTTCTGCCACACTGAGGAATTGTATTATGAGAAAACACATCCCTCTAGATGTTGGGAGATGGTATA...
chr1	259,774	260,073	4	236	3	chr1:259774-260073	AluY_dup27	chr1	259,774	260,073	+	AluY	Alu	SINE	85,322	GCCAGGCACAGTGGCTCATGCCTATAATCCCAGCACTTTAGGAGGCTGAGGCGGGTGGATCACAAGGTCAGGAGATCCAGACCATCCTGGTTAACTCGGTGAATCTCCATCTCTATTAAAAATATAAAAAATTAGCCGGGCGTGATGGAAGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAGACAGAGCTTGCAGTGAGCCGAGATCGCACTGCTGCACTCCAGCCTGGGCGACAGAGCAAGACTCTGTCTCTAAATAAATAAATAAATAAA
chr1	260,105	260,296	5	209	3	chr1:260105-260296	AluJb_dup39	chr1	260,105	260,296	+	AluJb	Alu	SINE	85,369	TGGTAGAAACCCCGTCTCTACCAAAAATACAAAAATTAGATGGGCAGGACGGCATGTGCCTGTAGTCCCAGGTAATCAGGAGGCTGAGGAGGGAGGATCGTTTGCACCCAGGAGGTAGAGGTTGCAGTGAGCTGACATTGCACCTTTGCACTCCAGCCTGGGCGATAGAGCCAGACCCTGTCTCAAAAAAAA
chr1	260,308	260,409	40	200	3	chr1:260308-260409	MER92-int_dup3	chr1	260,308	260,409	+	MER92-int	ERV1	LTR	85,398	GAAAACTATAGCCATTGTGAGTTATCAGATTCTAGTCTTGTTTCTTGTTTCTGGGCTATTTTTACCTCTTTGTAAACTGGATCCTGCCATCTGATGAATTTT
chr1	260,450	260,534	40	199	3	chr1:260450-260534	MER34A	chr1	260,450	260,534	+	MER34A	ERV1	LTR	85,422	TCTCTCCTACTAATGTATCTATTGTCAGTTAATTTGAAGGTCTCCAACCCTGGAACAAAGTTAGAAGAGGAAGGTTCTACTCCCC
chr1	261,386	262,346	3	236	3	chr1:261386-262346	L1MC3	chr1	261,386	262,346	+	L1MC3	L1	LINE	85,551	CAAATCTAGGTAAAAACTTTGAAAATGAATAGAATCTGTAGGCTGAAGGCACATGAACTATACTTCATTATTGGATTCCATTTTATAAAGTTCTTTCCAACAGAAGCAATTGTGAACAATTGTAAAACCACAGTGTCTGTATCTGGAGTAAAACAATGACTTACATAAGTCGCAGATGGTGGGAACCAGCTTTCTCACTGTTGAAGTGGGAGGTTACAAATTAGCAAGACGAGAAGGCTAGAATGATTCCTGTGATAGTAGATCAGAGGTGGAGACATCAACGTAAACTTATGCTTAGTTTAATATAGATACACACAGTT...
chr1	262,356	262,746	3	237	3	chr1:262356-262746	L1MC3_dup4	chr1	262,356	262,746	+	L1MC3	L1	LINE	85,678	TGGGGGGCATTCTACAAAATTCCTGACCAATCCTCCTCAGTGCTATGAAGGTCATCATGAGATGGAAAGCCTGACACACTGTCACAGCCAGGAAGAGCCTATGTGATGACTACATGCCGTGCGGGATCCTGGATGGGATCCTGGGTCAGAGTAAGATAGAACTAAGGGAATCCAAATGAAATATGAACTTCAGTTAATAACAGTCTATCAGTATTGGTTCATTAACTGCGGCAAATTATGTAAGATATTAATAAGCCATGTGAGACACACTGATAGAAGATGTTAATAAGAGAGGAAACTAGGTTGCGGCTACATGGGAA...
chr1	263,620	264,060	29	209	3	chr1:263620-264060	MER4A1	chr1	263,620	264,060	+	MER4A1	ERV1	LTR	85,851	GAAGGGAAAATAAATCTTGGGGACTCAAAATCACTAAGCTAAAGGGAAAAGTCAAGCTGGGAACTGCTTAGGGCAAACCCGCCTCCCATTCTATCCAAAACACCCGTCTGATCACCTAGATAAATGCATACCTGATTGCCTCACATGGAGAGGGTAATCAGCAATGCAAAAGAATGAAACCATTTGTCTCTTACCTACCTGTGACCTGGAAGCCCCCTGTCTGGCCTTCTCACCTTTCTGGACTGAACCAATGTACATCTTACACGTATTGATTGATCTCTCGTGTCTCCCTAAAGTGTATAAAACCAAGCTGTGCCCCG...
chr1	265,187	265,582	30	206	3	chr1:265187-265582	MLT1I_dup2	chr1	265,187	265,582	+	MLT1I	ERVL-MaLR	LTR	86,050	GTGGTAGTCATAGGTGCTGTTCTCCAGATATTTTCAGTTCATATTTTATGAATGCATTCTGACTGTTCCATCCCGCCTACTTACATTTTCACATGGCCACATGACTTTTTTTTTGCCAATGGAGGTGAGAAGAAATAACATGTGACTTTTTCAGGAGAAATCTCCAAGAAACAGAGTGCTATTCCGCATACTTTTTTCTCTTTTCTATAGCAATGGGGATCTTATTGATTGTCCCTCCTTCCGTCTGGATTCCTGTGTTAGGATGACACAGCACAGAGCTACCTCTCACCTGACCCATGATGAAATGTAAATAAATGAGG...
chr1	267,498	267,793	41	199	3	chr1:267498-267793	AluY_dup28	chr1	267,498	267,793	+	AluY	Alu	SINE	86,329	GACCAGGCGTGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACAAGGTCAGGAGATCAAGACGATTCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGTGTGGTGGCAGGTGCCTGTAGCCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCTTGAACCTGGGAGGTGGAGCTTGCAGTGAGCCAAGATCACGCCACTGCACTCCAGAATGGGAGAGAGAGCGAGACTTTCTCAAAAAAAAAAAAAAAA
chr1	268,184	268,253	29	155	0	chr1:268184-268253	MER4D1_dup2	chr1	268,184	268,253	null	MER4D1	ERV1	LTR	86,411	CAGGTTGTAGTCCTCACATTTGGCTCAAAATATTCAAAATTTTTTCCAGAGTTTGGCCTTTTCTTCAGCA
chr1	268,254	268,672	29	211	3	chr1:268254-268672	MER4CL34_dup1	chr1	268,254	268,672	+	MER4CL34	ERV1	LTR	86,425	TGAGAACGGAAAATAAATCCTGGGACCCCAGACTCACTAAGCCAAAGGGAAAAGCCAAGCTGGGAACTGGCTTATGCAAACCTGCTTCCCATCTGGTTCCTAAATAAGATAGCTATTACACAAAGATAAAAAAGCTACATCCCTGCCTCTACCTCCATCGCATGTAAAATGTGTATTCAGTGAACGCTGACCAAAGACAGAAGAATGCAACAATTTGCCTCTGATTTACCCACACCCATTTTTTCCACTTCTTCCCCTTTCCCCAATACCCACACTTTTCCCCTTTACTTACTGAGGTCCCCAGAAAATCTTTGGGAAAA...
chr1	268,690	268,968	29	209	3	chr1:268690-268968	MER4D1_dup3	chr1	268,690	268,968	null	MER4D1	ERV1	LTR	86,478	GGTCTCCACAGTCTCTTATCTTAACCCAGACTCTCCTTTCTATTGATAGCAGGTCTGTAGATAATAATTCTTTCAACCAATTGACAATCAGAAAATCTTTGAATCTATCTATGACCTGTAAGCCCCATTACTTTGAATTTTCCTCCTTCCAGACCAAACCAATGCAGACCAAACCAATGCAGAACTCCTATGTGCTGATGGTGGTCTTACATTTCCCTAAGTTTCTGCCGACTAAACTGTGCACACGTTCTCAGGACCTCCTGAAGCTGCGTCACAGGC
chr1	269,129	269,360	149	52	0	chr1:269129-269360	MIR_dup33	chr1	269,129	269,360	+	MIR	MIR	SINE	86,529	GGTCTCAGAGCCAGGTTACCTTGTCTTAGGTCCAGTGGCACCCTGACTGGCTTGGTGTCCTTGAACAAGTTACCTAACCTCTCCATACCTCAGTCCCTCAGCTGTAAAATTAAAAAAAAAAAAAAAGAAGAAGAAGAGTACCTACTGTATAGCATTGATTTGAAGATTGAATGAGCTGGTATTATACAACGTTTAGAAGCAGTGCCTGACACGCAAAAGGCTCTCAACAAAT
chr1	269,736	269,998	217	21	1	chr1:269736-269998	L5_dup1	chr1	269,736	269,998	+	L5	RTE-X	LINE	86,611	TCTCTTTATTTGCTTCTGCTAATTAAAAAATCAGAGCTAAAGATACTTAAACACTACAGTTAAAATGCCATGGTTGTCTATTGGCTTAACGAATTCTCTTATGAAATCAACTCTAAAATGTTATCCATCATAAATCATGAAACGCAATTTTTCTTATTCTCTTTAGAGCTTTACAATTCATCTTAAAGACCAGTGTTTACACTCTCTTCTGTAGGTTGTACAATAACTTTTGGTGAGAAAAAATAAAAGTCTGGCTTTCTGAC
chr1	270,306	270,608	19	221	3	chr1:270306-270608	AluSc_dup13	chr1	270,306	270,608	null	AluSc	Alu	SINE	86,699	GGCCAGGGATGGCGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGCAGATCATGAGGTCAAGAGATTGAGATCATCTGGGCCAATATGGTGAAATCCCCTCTCTACTAAAAATACAAAAATTATCTGGATGTAGTGGCACACACCTATAATCCCAGCTACTTGGGAAGCTGAGGCAGGAGAATCGCTTGAACACAGGCAGCGGAGGTTGCAGTGAGCTGAGATTGCACCACCGCACACCAGCCTGGTGACAGAGCAAGACTCCGTCTAAAAACAAAAACAAAAACAAAAAAA
chr1	271,097	271,380	163	48	0	chr1:271097-271380	MLT1H_dup1	chr1	271,097	271,380	null	MLT1H	ERVL-MaLR	LTR	86,833	TCTTTGCCTCTTTACCCTAATCTGGGCAAGCCTTGCAACCTGATTTGCCAAAAAAATATGAAGGAAGCAATGTGATGTAATTTTCCAGGCTAGAATGTAAGAAGCCTTGGAGCTTCTGCTTTTACTGTCTTCAGATGCTGCCTGAAACCACTGTAAGAAGCTCTAACCTACTGGAGGATAAGGGGTGAGCCCAAGAGCATCAAGGCTCCCATCAACAGCCAGTCCTGTGAGTGAGGCCATCTTGGACCTGCCAGCTCAGTAAACCCTTTTGCTGAACACAGCCC
chr1	274,386	274,515	104	68	0	chr1:274386-274515	MLT1I_dup3	chr1	274,386	274,515	+	MLT1I	ERVL-MaLR	LTR	87,288	CTGGTTCTCCTTCTAGAGATATGGTAGGATTGCAATTTCATACCATCCTTGAAGTTAGAGAGAGCCATGTGACTCATTTAGCCAATGAACTGTGAGCAGAATGACATGTCACTTCCAGCTGAAGCTTTAA
chr1	274,608	274,669	123	114	0	chr1:274608-274669	MLT1I_dup4	chr1	274,608	274,669	+	MLT1I	ERVL-MaLR	LTR	87,311	TGAGCCACAGAGATTTAGAGAATGGCTGTTAACACAGCATAATCCAGCCCATCCTGACTAAT
chr1	275,650	275,960	20	28	2	chr1:275650-275960	AluSg4_dup2	chr1	275,650	275,960	null	AluSg4	Alu	SINE	87,433	GGCCAGGGGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAACGTGGGTGGATCATGAGGTCAGGAGTTTGAGACCAGCCTGGCCAACATAGTGAAACCTCATCTCTACTAAAAATACAAAAAAATTAGCTAGGCACGGTGGCAGACACCTGTAATCCCAGCTACTTGGGCGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCAGAAGTTGCAGTGAGTCGAGATTGCACCAATGCACTCCAGCCGAGGTGACAGTGTGAGACTCTGTCCAAAAAAAAAAAAAAAGAAAGAAAAGAAAAA
chr1	276,287	276,359	207	21	1	chr1:276287-276359	L3_dup9	chr1	276,287	276,359	+	L3	CR1	LINE	87,505	GTGTTGGTTAATAAGTCAATGCGAACTGGGAGGGGAGATTTTTCAGGAGTGCCACAGGGCTCTCCCTTTAATC
chr1	277,436	277,621	48	25	2	chr1:277436-277621	L1M5_dup10	chr1	277,436	277,621	+	L1M5	L1	LINE	87,661	TGTCCATAAAATGTTTACAAAATTCAGTACATATTACACACCCCACCCTAAAAACATCTAAGCAAAGTAGAGAATGTAGAAATGCTACAGATTATATTCTCTGATTATGACACAACAAAACTAGAAATTACAGCATGGAAATTTAAAAGCTTTCTCTTAAATAATTCTGTGTCAAAAAGAAATCCA
chr1	277,622	277,918	30	209	3	chr1:277622-277918	AluSz_dup31	chr1	277,622	277,918	+	AluSz	Alu	SINE	87,701	GGCCGGGTACAGTGGCTCATGCCTGTAATTCCAGTACTTTGGGAGGCCAAGGTGGGCAGGTCACTTGAGGTCAGCAGTTCAAGACCAGCCTCGTCAACATGGCGACACCCTGTCTCTACTAAAAATACAAAAATTAGCTGGGCCTGGTGGCTCATGCCTGTAATCCCAGCTACTTAGGAGGCTGAGGCAGGAGAATTCCTTGAACCCAGAAGGTGGAGGTTGCAGTGAGCTGAGATTGCACCACTGCACTCCAGCCTAGGTGACACAGCAAGACTCTGTCAAAAAAAAAAAAAGAAA
chr1	277,919	277,969	169	59	0	chr1:277919-277969	L1M5_dup11	chr1	277,919	277,969	+	L1M5	L1	LINE	87,747	TCCAAATAAAATTTCCAGAATATGTGGAAAATAGTGACAATAAAAATATTA
chr1	277,970	278,255	28	77	2	chr1:277970-278255	AluJr_dup28	chr1	277,970	278,255	+	AluJr	Alu	SINE	87,757	CACATGTGTAATCCCAGCATTTTGAGATGCCAAGGTGGCAGGATCACTTGAGACCAGGAGTTCGCAACCAGCCTGGACAACATAGGGAGACTCCATCTCCACACATGCCAAAAAAATTTTTAAATAGCCAGGTATAGTGGTACTTCTTGTAATCCCATCTACTTGGGAGGCTAAGGTGGGAGAATCACCCAACCTCAGGAGTTCAGGGCTTCAGCAAGCCATGATCATATCACTGCACTCCAGCCTCAGCAACAGAGCAAGATCCTATCTCAAAAAAAAAAAAAAA
chr1	278,256	278,386	63	60	0	chr1:278256-278386	L1M5_dup12	chr1	278,256	278,386	+	L1M5	L1	LINE	87,802	TCACATGTGGGAAATAGCTATAGCACAATAAAAATAAATGTATTAAGTATGAACAACAAAAAAGCTAGTAAAGGTTGAACAACAACTATCCTTAGGAAAGTGGAAATAATGTATTAATAAATATGAAAGCA
chr1	278,387	278,687	28	64	2	chr1:278387-278687	AluSx_dup26	chr1	278,387	278,687	+	AluSx	Alu	SINE	87,822	GGCTAGGCATGGTGACTCACATCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGCAGATCACCTGAGGTCAGGAGTTCCAGACCAGCCTGGCCAACATGGTGAAATCTTGTCTCTCCTACAAATACAAAAACTAGCCAGGCTTGGTTGTGCACTCCTGTAATTCGAGCTACTTGGGAGGCTGAGGCAGGAGAATCTCTTGAACCTGAGAGGCAGAGGTTGCAGTGAGCCAAGATCATGCCACTGCACTCCAGCTGGGGCAACAGAGTGACACTCCATCTCAAAATAAATAAATAAGAAA
chr1	278,688	278,759	160	58	0	chr1:278688-278759	L1M5_dup13	chr1	278,688	278,759	+	L1M5	L1	LINE	87,874	GCAGAAACTAATAAATTAGAAAACAGAAACATAGAACTAATTTATAAATCAAAGCACTATGCCTTGAAAAGA
chr1	279,113	279,345	157	11	1	chr1:279113-279345	MIRb_dup39	chr1	279,113	279,345	null	MIRb	MIR	SINE	87,936	GAGAGGCAGTATAGTATCATAAGGAAAAATAGACTTTGGAGTAGGCAGAAATTAGGTTTGAATTACTAGCCATGAGGCTTTGGGAACATTACTTAAACTCTATAAGCTTCAATTTCTTTATCTATAAGGTAGGTATAAAACCTGAAAGTTTTGGCATGAGTTTAGTAAAACTGTCTGTGAAGCCTTTGTGGACTGCTTGGTCCATGTAGGCATTTGATAAACGGTGGCTTTAT
chr1	279,348	279,541	190	15	1	chr1:279348-279541	L3_dup10	chr1	279,348	279,541	+	L3	CR1	LINE	87,971	TGGATAAAGACAGAGATCACATATTAATAAAATTTGCACAAAGTCGGCAAATTGTTGAAAGGGAAGGCTAAGATGATTAATAAAATCAAGAGCCAGATGATCTCAACAACCTGAAATAACTGGCTGACAACCAATTTGAATAACTCCCTGCGGGTGAAGTTCAAAGTACTATTCGGGTTTTTTTTTTAAAGTTT
chr1	279,542	279,848	19	221	3	chr1:279542-279848	AluSx3_dup4	chr1	279,542	279,848	+	AluSx3	Alu	SINE	87,998	GGCTGGGTGCAGCGGCTCACGCCTGTAATCCAAGCACTTAGGGAAGCCAAGGTGGGCAGATCATGAAGTCAGGAGTTGAAGACCAGCCCGGTCAACATGGTGAAACCCCATTTCTACTAAAAATAAAAAATTAGCCGGGCCTGCTGGTGGATGCCTGTAGTCCCAGCTACTCGGGAGGCTAAGGCAGGAGAATCGCTTGAACCCAGGAGGTGGAGGTTGCAGGGAGCCGAGATCGCACCACTGCACTCCAGCCTGGGCGACAGAGCGAGATTCCGTCTCAAAAAGTAAAATAAAATAAAATAAAAAA
chr1	279,849	279,923	188	18	1	chr1:279849-279923	L3_dup11	chr1	279,849	279,923	+	L3	CR1	LINE	88,039	TAAAAGTTTGATATATTCAGAATCAGGGAGGTCTGCTGGGTGCAGTTCATTTGAAAAATTCCTCAGCATTTTAGT
chr1	279,941	280,033	199	26	0	chr1:279941-280033	LTR33_dup4	chr1	279,941	280,033	null	LTR33	ERVL	LTR	88,052	GTTCCCTTAACCCTGGAAAGAGATCCTTCATTAAACTCTTTCTGCTTAATCCTTTGAGAGTGCAACAATTTCCTGCTAGGACCCTGACAGATA
chr1	280,034	280,182	13	69	0	chr1:280034-280182	MSTB1_dup6	chr1	280,034	280,182	+	MSTB1	ERVL-MaLR	LTR	88,068	TGCTAGGGTTTGGATATTTGACCACTCCAAACTCATGTTGAAATGTGATCCCCATTGTTGGAGGTGGGGCCTAATGGGAGGTGTTTTGGTCCTGAGTGTGGACCTCTCACGAATGTCTTGGTGCCATCCAAGTGAGTTCTTGCTCGCTC
chr1	280,476	280,726	19	221	3	chr1:280476-280726	MSTB1_dup7	chr1	280,476	280,726	+	MSTB1	ERVL-MaLR	LTR	88,120	TACCTAGTTCTAGCTCTCTTAATTCCCACAAGAGCTGGTTGTTAACAAGAGCCTGGCACAAACCCCTCTCTCTCGCCACGTGATCTCTGCACATGCCAGCTTCCCTTCCCCTTCTGTCATGAGTGGAAACAGCCTAACGCCCTCACCAGAAGCAAATGGTGGCACCATGCTTCTTGCACACCTTCAGAACTGTGAGCCAAATAAACCTCTCTTCTTTAAAATTATTCAGCCTCTGGTATTCCTTTATAACA
chr1	280,761	280,779	181	59	0	chr1:280761-280779	MSTB1_dup8	chr1	280,761	280,779	+	MSTB1	ERVL-MaLR	LTR	88,168	GCAAAAGCAGACTAAAACA
chr1	280,780	280,818	203	23	1	chr1:280780-280818	LTR33_dup5	chr1	280,780	280,818	null	LTR33	ERVL	LTR	88,172	TGCCAATCCCTCGGTGCATCACCATTTCTAATTAGTTCC
chr1	280,902	281,070	161	15	1	chr1:280902-281070	LTR33_dup6	chr1	280,902	281,070	null	LTR33	ERVL	LTR	88,188	TGTGATGGGCATTTGCTTGCTTCCCCACCAGATTCTCTACCTTCACCCTTCCTGCAAGATTCCCTAGGAAGCTGACTTCTGCTGAATGCAACACTCAGGTTCTCTGCTTCCTAGATTCTAGTTGAGTTTGGTCCATGGGAGGCCTTGGCAGAAATTTTGAGAGTAAGAG
chr1	282,994	283,095	137	47	0	chr1:282994-283095	MER5B_dup4	chr1	282,994	283,095	null	MER5B	hAT-Charlie	DNA	88,475	CAATGATTCTCACCCCAGTTATATATTAAAATTACCTGGAGATATATAAAAACTATCAATGTTCTACTCTTCTACAGATTAAATCATCATCACTGAGGGTGG
chr1	284,045	284,337	71	54	0	chr1:284045-284337	MLT1C_dup3	chr1	284,045	284,337	+	MLT1C	ERVL-MaLR	LTR	88,628	CTAATCCACTGTGACTCTGTCCTTAAATAAAAGGGAGATTTGGACATAGAGAGAGGCACACGGGGAGGATGCCATATGAGAATTGACACTGTGCTGTCACAAGCCAAGGAACTACTGGAAGGAGAGAAAGAGGACTGGAACAGTTCCTTCCTTAGCACCTTTTCAGGCAGCCTAGCCCTGCCAGCTTCTTGATCTGGACTTCTCACCTCTAGAATTGTGAGGCAATAAATCTCTGTTGCTTAAGTTACCCAGTTTGTGGTACCTTATTACAGGAGCCCTAGGAAAATAATTCA
chr1	284,894	285,131	29	211	3	chr1:284894-285131	AluJb_dup40	chr1	284,894	285,131	+	AluJb	Alu	SINE	88,739	GGCCAGGTGCAGTGGCTCACACCTGTAATCCCACCACTTCAGGAGGCTGAGGCAACATGGCAAAACCTTCTCTTCAAAAAATTTTTTAAAAGTTAGCTGGATGTTGTGGAGGCAAGAGGATCACTTGAGGATCACTTGAGTCCATGAGGTCAAGGCTGCAGTGAGTCATGTTTGCACCACTGCACTCTAGCCTAGGTGACAGAGCTAGTCCCTATCAAAAAAAAAAAAAAAAAAAAAA
chr1	285,132	285,250	114	108	0	chr1:285132-285250	L2a_dup48	chr1	285,132	285,250	+	L2a	L2	LINE	88,762	GAATGGAGAGAATGCTACATGAGAGAAAGGATCTTATCTATCACGTTCACCTCCCAAGAGGTGAACATATCCCCCAAAGCCTGATAGAGAGAAGATGCTCATTAATATTTAATGCATGA

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