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tcga-prad-bcr

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#6
by waticlems - opened
base: refs/heads/main
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Files changed (2) hide show
  1. bcr.csv +299 -0
  2. metadata.csv +404 -0
bcr.csv ADDED
@@ -0,0 +1,299 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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+ 275,TCGA-KK-A7AQ,1,3.3319644079397674
278
+ 276,TCGA-KK-A7B0,1,1.659137577002053
279
+ 277,TCGA-VP-A878,1,0.2683093771389459
280
+ 278,TCGA-YL-A8HO,1,2.924024640657084
281
+ 279,TCGA-KK-A8I9,1,2.573579739904176
282
+ 280,TCGA-KK-A7B3,1,0.8049281314168378
283
+ 281,TCGA-KK-A8I7,1,2.9787816563997263
284
+ 282,TCGA-G9-6339,1,4.473648186173854
285
+ 283,TCGA-HC-A9TH,1,0.9609856262833676
286
+ 284,TCGA-KK-A7AU,1,0.5667351129363449
287
+ 285,TCGA-YL-A8HM,1,4.032854209445585
288
+ 286,TCGA-J4-AATZ,1,0.216290212183436
289
+ 287,TCGA-G9-6498,1,3.67419575633128
290
+ 288,TCGA-KK-A7B2,1,1.894592744695414
291
+ 289,TCGA-J4-A83M,1,1.426420260095825
292
+ 290,TCGA-J4-A6G3,1,1.6919917864476386
293
+ 291,TCGA-V1-A9OL,1,0.2874743326488706
294
+ 292,TCGA-KK-A6E7,1,2.532511978097194
295
+ 293,TCGA-YL-A8SI,1,3.89596167008898
296
+ 294,TCGA-HC-7232,1,2.0971937029431897
297
+ 295,TCGA-G9-6332,1,3.23066392881588
298
+ 296,TCGA-HC-7738,1,1.1498973305954825
299
+ 297,TCGA-HC-7079,1,1.0403832991101984
metadata.csv ADDED
@@ -0,0 +1,404 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ case_id,tissue_source_site,last_contact_days_to,psa_most_recent_results,days_to_psa_most_recent,biochemical_recurrence_indicator,days_to_biochemical_recurrence_first,new_tumor_event_type,new_tumor_event_dx_days_to,days_to_biochemical_recurrence_first_follow_up_v1,gleason_score,gleason_pattern_primary,gleason_pattern_secondary,gleason_pattern_tertiary,isup
2
+ TCGA-V1-A9OT,University of California San Francisco,476,0.01,349,YES,missing,Biochemical evidence of disease,292,292,6,3,3,missing,1
3
+ TCGA-KK-A7AP,MD Anderson Cancer Center,196,missing,missing,missing,missing,missing,missing,missing,9,4,5,missing,5
4
+ TCGA-FC-A4JI,Asterand,29,missing,missing,missing,missing,missing,missing,missing,8,5,3,missing,4
5
+ TCGA-KK-A8IJ,MD Anderson Cancer Center,1559,0.1,167,NO,missing,New Primary Tumor,307,missing,7,4,3,5,3
6
+ TCGA-V1-A9Z9,University of California San Francisco,295,0.015,291,NO,missing,missing,missing,missing,9,4,5,missing,5
7
+ TCGA-EJ-7793,University of Pittsburgh,114,0.1,114,NO,missing,missing,missing,missing,7,3,4,4,2
8
+ TCGA-XK-AAJ3,Mayo Clinic Arizona,868,0.09,863,NO,missing,missing,missing,missing,8,4,4,missing,4
9
+ TCGA-YL-A8SQ,PROCURE Biobank,1943,1.1,1943,YES,329,Biochemical evidence of disease,329,329,9,4,5,3,5
10
+ TCGA-XQ-A8TB,University of Sao Paulo,770,0.0,674,NO,missing,missing,missing,missing,9,4,5,missing,5
11
+ TCGA-KK-A8IM,MD Anderson Cancer Center,1438,0.1,1438,NO,missing,missing,missing,missing,7,4,3,missing,3
12
+ TCGA-HC-7232,International Genomics Consortium,89,missing,missing,missing,missing,Biochemical evidence of disease,766,766,9,4,5,missing,5
13
+ TCGA-EJ-7794,University of Pittsburgh,285,0.1,285,NO,missing,missing,missing,missing,7,3,4,3,2
14
+ TCGA-HC-8264,International Genomics Consortium,48,missing,missing,missing,missing,missing,missing,missing,9,4,5,missing,5
15
+ TCGA-KK-A7AW,MD Anderson Cancer Center,1054,0.8,204,YES,204,missing,missing,missing,7,4,3,missing,3
16
+ TCGA-HC-8216,International Genomics Consortium,42,.19,137,missing,missing,missing,missing,missing,7,4,3,5,3
17
+ TCGA-EJ-5527,University of Pittsburgh,397,0.1,217,NO,missing,missing,missing,missing,7,4,3,3,3
18
+ TCGA-J4-A83N,ABS - Lahey Clinic,617,0.1,530,NO,missing,New Primary Tumor,433,missing,7,3,4,missing,2
19
+ TCGA-HC-A6AL,International Genomics Consortium,67,missing,missing,missing,missing,missing,missing,missing,7,3,4,missing,2
20
+ TCGA-KK-A8IC,MD Anderson Cancer Center,2051,0.9,2047,YES,1060,Biochemical evidence of disease,1060,1060,9,4,5,missing,5
21
+ TCGA-J4-A67O,ABS - Lahey Clinic,491,0.1,490,NO,missing,missing,missing,missing,7,3,4,missing,2
22
+ TCGA-KK-A7AY,MD Anderson Cancer Center,1572,0.2,1572,NO,1124,Biochemical evidence of disease,1124,missing,7,4,3,missing,3
23
+ TCGA-SU-A7E7,Global Bioclinical-Moldova,112,0.01,426,NO,missing,missing,missing,missing,8,5,3,missing,4
24
+ TCGA-G9-6363,Roswell Park,993,0.03,993,NO,missing,missing,missing,missing,7,4,3,missing,3
25
+ TCGA-G9-7523,Roswell Park,324,0.03,324,NO,missing,missing,missing,missing,10,5,5,missing,5
26
+ TCGA-V1-A8X3,University of California San Francisco,202,0.03,202,NO,missing,missing,missing,missing,7,3,4,missing,2
27
+ TCGA-G9-6364,Roswell Park,841,0.03,841,NO,missing,missing,missing,missing,7,3,4,missing,2
28
+ TCGA-FC-7961,Asterand,70,missing,missing,missing,missing,missing,missing,missing,9,4,5,missing,5
29
+ TCGA-CH-5740,Indivumed,31,1.6,missing,NO,missing,missing,missing,missing,7,3,4,missing,2
30
+ TCGA-HC-A6HX,International Genomics Consortium,38,missing,missing,missing,missing,missing,missing,missing,7,4,3,5,3
31
+ TCGA-J4-A83I,ABS - Lahey Clinic,279,0.1,257,NO,missing,missing,missing,missing,7,4,3,missing,3
32
+ TCGA-KK-A8ID,MD Anderson Cancer Center,1973,0.1,1924,NO,missing,missing,missing,missing,9,5,4,missing,5
33
+ TCGA-V1-A9Z7,University of California San Francisco,123,28.1,-75,YES,missing,Biochemical evidence of disease,missing,missing,9,5,4,missing,5
34
+ TCGA-KK-A59X,MD Anderson Cancer Center,1712,missing,missing,missing,missing,Locoregional Recurrence,2233,missing,9,5,4,missing,5
35
+ TCGA-H9-7775,ABS - IUPUI,44,0.04,73,NO,missing,missing,missing,missing,7,3,4,0,2
36
+ TCGA-HC-8258,International Genomics Consortium,66,.01,162,NO,missing,missing,missing,missing,6,3,3,missing,1
37
+ TCGA-YL-A8SC,PROCURE Biobank,1261,0.65,1261,NO,missing,missing,missing,152,9,4,5,missing,5
38
+ TCGA-HC-A6AP,International Genomics Consortium,71,missing,missing,missing,missing,missing,missing,missing,7,3,4,missing,2
39
+ TCGA-G9-6351,Roswell Park,1215,0.03,1215,NO,missing,missing,missing,missing,7,3,4,missing,2
40
+ TCGA-FC-A8O0,Asterand,54,7.82,18,NO,missing,missing,missing,missing,6,3,3,4,1
41
+ TCGA-V1-A9OA,University of California San Francisco,636,0.01,510,NO,missing,missing,missing,missing,9,4,5,missing,5
42
+ TCGA-EJ-5515,University of Pittsburgh,1061,0.1,1061,NO,missing,missing,missing,missing,7,3,4,4,2
43
+ TCGA-J4-A67S,ABS - Lahey Clinic,523,0.1,522,NO,missing,Biochemical evidence of disease,708,708,7,3,4,missing,2
44
+ TCGA-HC-7737,International Genomics Consortium,64,0.1,147,missing,missing,missing,missing,missing,7,3,4,missing,2
45
+ TCGA-J4-A67T,ABS - Lahey Clinic,183,0.1,154,NO,missing,missing,missing,missing,7,3,4,missing,2
46
+ TCGA-EJ-5512,University of Pittsburgh,782,0,782,NO,missing,missing,missing,missing,7,3,4,3,2
47
+ TCGA-V1-A9OF,University of California San Francisco,1184,0.01,1184,NO,missing,missing,missing,missing,6,3,3,missing,1
48
+ TCGA-HC-7209,International Genomics Consortium,41,0.05,108,missing,missing,missing,missing,missing,6,3,3,missing,1
49
+ TCGA-G9-6356,Roswell Park,1000,0.13,986,NO,missing,missing,missing,missing,9,4,5,3,5
50
+ TCGA-H9-A6BY,ABS - IUPUI,112,missing,missing,missing,missing,missing,missing,missing,7,3,4,missing,2
51
+ TCGA-V1-A9OH,University of California San Francisco,1253,0.01,1253,NO,missing,missing,missing,missing,8,4,4,missing,4
52
+ TCGA-KK-A6E4,MD Anderson Cancer Center,2753,0.1,890,NO,missing,missing,missing,missing,7,3,4,missing,2
53
+ TCGA-G9-A9S4,Roswell Park,757,0.03,753,NO,missing,missing,missing,missing,8,4,4,5,4
54
+ TCGA-EJ-5495,University of Pittsburgh,606,0.13,606,NO,missing,missing,missing,missing,8,5,3,4,4
55
+ TCGA-V1-A8WN,University of California San Francisco,476,0.02,463,NO,missing,missing,missing,missing,6,3,3,missing,1
56
+ TCGA-M7-A725,University of North Carolina,96,missing,96,NO,missing,missing,missing,missing,7,4,3,5,3
57
+ TCGA-VP-A87H,Washington University,663,0.01,663,NO,missing,missing,missing,missing,9,4,5,missing,5
58
+ TCGA-YL-A8SJ,PROCURE Biobank,1395,0.24,1426,YES,752,Biochemical evidence of disease,752,752,9,4,5,missing,5
59
+ TCGA-HC-7742,International Genomics Consortium,113,0.1,113,NO,missing,Biochemical evidence of disease,missing,210,7,3,4,missing,2
60
+ TCGA-V1-A8ML,University of California San Francisco,448,0.01,448,NO,missing,missing,missing,missing,7,3,4,missing,2
61
+ TCGA-KK-A59V,MD Anderson Cancer Center,2859,0.1,2500,NO,missing,missing,missing,missing,9,4,5,missing,5
62
+ TCGA-M7-A722,University of North Carolina,717,missing,559,YES,559,Biochemical evidence of disease,559,missing,8,4,4,3,4
63
+ TCGA-HC-7820,International Genomics Consortium,102,missing,missing,missing,missing,missing,missing,missing,7,3,4,missing,2
64
+ TCGA-HC-8256,International Genomics Consortium,95,missing,missing,missing,missing,missing,missing,missing,7,3,4,missing,2
65
+ TCGA-HC-7745,International Genomics Consortium,63,missing,missing,missing,missing,missing,missing,missing,7,4,3,missing,3
66
+ TCGA-V1-A8MK,University of California San Francisco,508,0.83,-1,YES,missing,missing,missing,missing,6,3,3,missing,1
67
+ TCGA-HI-7171,Fox Chase,missing,0.7,631,YES,218,Biochemical evidence of disease,missing,218,9,5,4,missing,5
68
+ TCGA-KK-A6E3,MD Anderson Cancer Center,2056,0.1,1065,NO,missing,missing,missing,missing,7,3,4,missing,2
69
+ TCGA-G9-6332,Roswell Park,2328,0.73,2090,missing,missing,Biochemical evidence of disease,1180,1180,7,4,3,missing,3
70
+ TCGA-HC-7211,International Genomics Consortium,24,10.9,-17,missing,missing,missing,missing,missing,7,3,4,missing,2
71
+ TCGA-M7-A71Z,University of North Carolina,209,missing,209,NO,missing,missing,missing,missing,7,4,3,missing,3
72
+ TCGA-V1-A9O9,University of California San Francisco,204,5.04,-53,YES,missing,missing,missing,missing,8,3,5,missing,4
73
+ TCGA-EJ-A46F,University of Pittsburgh,299,19.8,215,YES,215,Biochemical evidence of disease,215,missing,8,4,4,3,4
74
+ TCGA-G9-7509,Roswell Park,1164,0.03,352,NO,missing,missing,missing,missing,6,3,3,4,1
75
+ TCGA-VP-A879,Washington University,missing,0.01,688,NO,missing,missing,missing,missing,9,4,5,missing,5
76
+ TCGA-J4-8200,ABS - Lahey Clinic,196,0.1,196,NO,missing,missing,missing,missing,7,3,4,missing,2
77
+ TCGA-CH-5763,Indivumed,365,0.1,360,NO,missing,missing,missing,missing,7,3,4,missing,2
78
+ TCGA-V1-A9O7,University of California San Francisco,2425,9.69,2425,YES,921,Biochemical evidence of disease,819,819,9,5,4,missing,5
79
+ TCGA-EJ-5503,University of Pittsburgh,530,0.1,530,NO,missing,missing,missing,missing,8,5,3,4,4
80
+ TCGA-HI-7169,Fox Chase,1949,0.1,1941,NO,missing,missing,missing,missing,7,3,4,missing,2
81
+ TCGA-EJ-A46H,University of Pittsburgh,229,0.1,131,NO,missing,missing,missing,missing,7,3,4,missing,2
82
+ TCGA-G9-6347,Roswell Park,1718,00.03,1718,NO,missing,missing,missing,missing,6,3,3,missing,1
83
+ TCGA-YL-A9WJ,PROCURE Biobank,missing,3.1,838,YES,76,Distant Metastasis,1476,76,8,4,4,3,4
84
+ TCGA-XK-AAJP,Mayo Clinic Arizona,889,0.09,889,NO,missing,missing,missing,missing,7,4,3,missing,3
85
+ TCGA-HC-7081,International Genomics Consortium,72,missing,missing,missing,missing,missing,missing,missing,9,4,5,missing,5
86
+ TCGA-CH-5764,Indivumed,31,13.95,29,NO,missing,missing,missing,missing,7,4,3,missing,3
87
+ TCGA-EJ-5504,University of Pittsburgh,229,1.0,77,YES,77,Biochemical evidence of disease,missing,77,7,4,3,5,3
88
+ TCGA-QU-A6IO,Harvard Beth Israel,1436,0.1,1436,NO,missing,missing,missing,missing,6,3,3,missing,1
89
+ TCGA-KK-A8I5,MD Anderson Cancer Center,2553,0.1,1979,NO,missing,missing,missing,missing,7,3,4,missing,2
90
+ TCGA-KK-A7B1,MD Anderson Cancer Center,1063,0.1,179,NO,missing,missing,missing,missing,7,4,3,missing,3
91
+ TCGA-CH-5751,Indivumed,1065,0.01,1004,NO,missing,Distant Metastasis,365,missing,10,5,5,missing,5
92
+ TCGA-EJ-5531,University of Pittsburgh,724,0.1,724,NO,missing,missing,missing,missing,7,4,3,3,3
93
+ TCGA-XK-AAIR,Mayo Clinic Arizona,972,0.09,953,NO,missing,missing,missing,missing,8,4,4,missing,4
94
+ TCGA-EJ-7785,University of Pittsburgh,259,0.1,259,NO,missing,missing,missing,missing,7,3,4,3,2
95
+ TCGA-YL-A9WX,PROCURE Biobank,1518,0.76,1610,YES,1506,Biochemical evidence of disease,1506,1506,9,4,5,3,5
96
+ TCGA-J4-AAU2,ABS - Lahey Clinic,304,0,224,NO,missing,missing,missing,missing,6,3,3,missing,1
97
+ TCGA-EJ-7782,University of Pittsburgh,350,0.1,350,NO,missing,missing,missing,missing,8,4,4,4,4
98
+ TCGA-HC-7821,International Genomics Consortium,56,0.01,236,NO,missing,Biochemical evidence of disease,missing,950,8,4,4,missing,4
99
+ TCGA-M7-A723,University of North Carolina,62,0.1,62,NO,missing,missing,missing,missing,7,4,3,5,3
100
+ TCGA-HC-8257,International Genomics Consortium,29,0.1,726,NO,missing,missing,missing,missing,7,3,4,missing,2
101
+ TCGA-YL-A8SL,PROCURE Biobank,798,0,623,NO,missing,missing,missing,missing,8,4,4,3,4
102
+ TCGA-HC-7744,International Genomics Consortium,51,0.04,282,NO,missing,missing,missing,missing,7,4,3,missing,3
103
+ TCGA-V1-A8MJ,University of California San Francisco,1230,0.015,1230,NO,missing,Biochemical evidence of disease,missing,428,7,3,4,missing,2
104
+ TCGA-HI-7170,Fox Chase,1780,0.1,1746,NO,missing,missing,missing,missing,6,3,3,missing,1
105
+ TCGA-WW-A8ZI,Wake Forest University,176,0,176,NO,missing,missing,missing,missing,8,4,4,missing,4
106
+ TCGA-KK-A6E2,MD Anderson Cancer Center,4604,0.1,438,NO,missing,missing,missing,missing,7,3,4,missing,2
107
+ TCGA-HC-7738,International Genomics Consortium,81,missing,missing,missing,missing,Biochemical evidence of disease,420,420,7,3,4,missing,2
108
+ TCGA-EJ-7317,University of Pittsburgh,285,0.1,285,NO,missing,missing,missing,missing,7,3,4,3,2
109
+ TCGA-4L-AA1F,"Proteogenex, Inc.",350,3.5,350,NO,missing,missing,missing,missing,8,4,4,missing,4
110
+ TCGA-2A-A8VT,Memorial Sloan Kettering Cancer Center,995,0.05,995,NO,missing,missing,missing,missing,9,4,5,missing,5
111
+ TCGA-KK-A6E5,MD Anderson Cancer Center,1498,0.1,1496,NO,missing,missing,missing,missing,7,4,3,missing,3
112
+ TCGA-EJ-5494,University of Pittsburgh,378,missing,184,NO,missing,missing,missing,missing,7,4,3,4,3
113
+ TCGA-M7-A724,University of North Carolina,483,missing,483,NO,missing,missing,missing,missing,8,4,4,missing,4
114
+ TCGA-EJ-7123,University of Pittsburgh,1491,0.1,1491,NO,missing,missing,missing,missing,7,3,4,3,2
115
+ TCGA-YL-A8SK,PROCURE Biobank,1155,0.03,924,NO,missing,missing,missing,missing,9,4,5,missing,5
116
+ TCGA-G9-7519,Roswell Park,457,0.03,457,NO,missing,missing,missing,missing,7,3,4,missing,2
117
+ TCGA-V1-A8MM,University of California San Francisco,1019,0.37,990,YES,990,Biochemical evidence of disease,990,990,7,4,3,missing,3
118
+ TCGA-XJ-A9DI,University of Kansas,1461,0.10,1461,NO,missing,missing,missing,missing,9,5,4,missing,5
119
+ TCGA-H9-A6BX,ABS - IUPUI,570,0.04,570,NO,missing,missing,missing,missing,6,3,3,missing,1
120
+ TCGA-HC-A9TE,International Genomics Consortium,134,0.064,134,NO,missing,Biochemical evidence of disease,216,216,9,5,4,3,5
121
+ TCGA-KK-A59Y,MD Anderson Cancer Center,1359,0.1,1359,NO,missing,missing,missing,missing,9,4,5,missing,5
122
+ TCGA-YL-A8SB,PROCURE Biobank,1384,0.23,1384,NO,missing,missing,missing,1384,9,4,5,missing,5
123
+ TCGA-HC-8259,International Genomics Consortium,123,0.01,123,NO,missing,missing,missing,missing,6,3,3,missing,1
124
+ TCGA-J4-A6G1,ABS - Lahey Clinic,405,0.1,178,NO,missing,missing,missing,missing,8,4,4,3,4
125
+ TCGA-G9-7510,Roswell Park,674,0.03,674,NO,missing,missing,missing,missing,8,4,4,5,4
126
+ TCGA-HC-A6AQ,International Genomics Consortium,106,missing,missing,missing,missing,missing,missing,missing,7,3,4,missing,2
127
+ TCGA-J4-A67R,ABS - Lahey Clinic,454,0.1,454,NO,missing,missing,missing,missing,7,4,3,missing,3
128
+ TCGA-EJ-5514,University of Pittsburgh,724,0.1,724,NO,missing,missing,missing,missing,9,4,5,4,5
129
+ TCGA-HC-7736,International Genomics Consortium,22,.02,102,missing,missing,missing,missing,missing,7,3,4,missing,2
130
+ TCGA-J4-8198,ABS - Lahey Clinic,98,0.1,76,NO,missing,missing,missing,missing,7,4,3,5,3
131
+ TCGA-G9-7525,Roswell Park,512,0.03,512,NO,missing,missing,missing,missing,7,4,3,missing,3
132
+ TCGA-G9-6365,Roswell Park,804,0.01,804,NO,missing,missing,missing,missing,7,3,4,missing,2
133
+ TCGA-HC-7075,International Genomics Consortium,63,.01,96,missing,missing,missing,missing,missing,6,3,3,missing,1
134
+ TCGA-CH-5741,Indivumed,395,0.02,339,NO,missing,missing,missing,missing,9,4,5,missing,5
135
+ TCGA-EJ-5521,University of Pittsburgh,842,0.1,240,NO,missing,missing,missing,missing,7,3,4,3,2
136
+ TCGA-HC-A6HY,International Genomics Consortium,134,missing,missing,missing,missing,missing,missing,missing,7,3,4,missing,2
137
+ TCGA-CH-5746,Indivumed,731,0.1,693,NO,missing,missing,missing,missing,7,3,4,missing,2
138
+ TCGA-EJ-5526,University of Pittsburgh,567,0.1,175,NO,missing,Locoregional Recurrence,537,537,8,4,4,3,4
139
+ TCGA-XA-A8JR,University of Minnesota,119,0,69,NO,missing,missing,missing,missing,7,4,3,5,3
140
+ TCGA-KK-A8IB,MD Anderson Cancer Center,83,missing,missing,missing,missing,missing,missing,missing,9,4,5,missing,5
141
+ TCGA-J4-A67N,ABS - Lahey Clinic,503,0.7,503,YES,442,Biochemical evidence of disease,442,442,7,3,4,missing,2
142
+ TCGA-2A-A8W1,Memorial Sloan Kettering Cancer Center,112,0.05,-122,NO,missing,missing,missing,missing,7,4,3,missing,3
143
+ TCGA-G9-6362,Roswell Park,822,0.07,815,NO,missing,missing,missing,missing,7,4,3,5,3
144
+ TCGA-G9-7522,Roswell Park,452,0.1,452,NO,missing,missing,missing,missing,7,3,4,missing,2
145
+ TCGA-YL-A8SP,PROCURE Biobank,2170,0.38,2155,NO,missing,missing,missing,2036,9,4,5,3,5
146
+ TCGA-Y6-A8TL,University of Arizona,775,0,775,NO,missing,missing,missing,missing,6,3,3,missing,1
147
+ TCGA-CH-5748,Indivumed,31,missing,missing,missing,missing,missing,missing,missing,7,4,3,missing,3
148
+ TCGA-KK-A8IL,MD Anderson Cancer Center,missing,0.1,144,NO,missing,missing,missing,missing,9,4,5,missing,5
149
+ TCGA-HC-7233,International Genomics Consortium,52,missing,missing,missing,missing,missing,missing,missing,7,4,3,missing,3
150
+ TCGA-HC-8265,International Genomics Consortium,70,0.1,119,NO,missing,missing,missing,missing,8,3,5,missing,4
151
+ TCGA-2A-A8VO,Memorial Sloan Kettering Cancer Center,1332,0.05,1332,NO,missing,missing,missing,missing,6,3,3,4,1
152
+ TCGA-KK-A7AV,MD Anderson Cancer Center,822,0.1,822,NO,missing,missing,missing,missing,7,3,4,missing,2
153
+ TCGA-HC-8262,International Genomics Consortium,76,0.1,112,NO,missing,missing,missing,missing,8,4,4,missing,4
154
+ TCGA-KK-A6DY,MD Anderson Cancer Center,3524,0.1,903,NO,missing,missing,missing,missing,7,3,4,missing,2
155
+ TCGA-KK-A7AQ,MD Anderson Cancer Center,1386,0.1,1385,NO,1217,Biochemical evidence of disease,1217,missing,7,4,3,5,3
156
+ TCGA-V1-A8WS,University of California San Francisco,474,0.09,474,NO,missing,Biochemical evidence of disease,missing,missing,6,3,3,missing,1
157
+ TCGA-KK-A8IK,MD Anderson Cancer Center,1563,0.0,missing,NO,missing,missing,missing,missing,9,4,5,missing,5
158
+ TCGA-EJ-7792,University of Pittsburgh,526,0.13,526,NO,missing,missing,missing,missing,7,3,4,4,2
159
+ TCGA-V1-A9Z8,University of California San Francisco,187,0.01,181,NO,missing,missing,missing,missing,9,5,4,missing,5
160
+ TCGA-EJ-5542,University of Pittsburgh,519,0.1,519,NO,missing,missing,missing,missing,7,3,4,3,2
161
+ TCGA-EJ-7783,University of Pittsburgh,172,0.7,172,YES,81,missing,missing,missing,7,4,3,4,3
162
+ TCGA-V1-A9ZI,University of California San Francisco,86,3.11,86,YES,86,Biochemical evidence of disease,missing,86,9,4,5,missing,5
163
+ TCGA-TK-A8OK,Global BioClinical - Georgia,27,missing,missing,missing,missing,missing,missing,missing,7,3,4,missing,2
164
+ TCGA-EJ-7784,University of Pittsburgh,167,0.1,167,NO,missing,missing,missing,missing,7,4,3,4,3
165
+ TCGA-YL-A9WY,PROCURE Biobank,846,1.8,765,YES,765,Biochemical evidence of disease,765,765,9,5,4,missing,5
166
+ TCGA-HC-A631,International Genomics Consortium,54,missing,missing,missing,missing,missing,missing,missing,9,4,5,3,5
167
+ TCGA-G9-6373,Roswell Park,505,missing,missing,missing,missing,missing,missing,missing,7,4,3,missing,3
168
+ TCGA-QU-A6IN,Harvard Beth Israel,3487,0.1,3428,NO,missing,missing,missing,missing,7,3,4,5,2
169
+ TCGA-KK-A8I4,MD Anderson Cancer Center,2068,0.2,1964,NO,1155,Distant Metastasis,1162,2162,7,4,3,5,3
170
+ TCGA-V1-A9ZG,University of California San Francisco,1117,0.015,893,NO,missing,missing,missing,missing,9,4,5,missing,5
171
+ TCGA-KK-A7B0,MD Anderson Cancer Center,999,0.1,999,NO,606,Biochemical evidence of disease,606,missing,9,4,5,missing,5
172
+ TCGA-EJ-5530,University of Pittsburgh,1272,0.1,586,NO,missing,missing,missing,missing,7,3,4,3,2
173
+ TCGA-CH-5750,Indivumed,396,0.02,337,NO,missing,missing,missing,missing,7,3,4,missing,2
174
+ TCGA-FC-A6HD,Asterand,54,missing,missing,missing,missing,missing,missing,missing,7,4,3,missing,3
175
+ TCGA-YL-A9WK,PROCURE Biobank,1897,15.6,1871,YES,1009,Biochemical evidence of disease,1009,1009,9,4,5,missing,5
176
+ TCGA-J4-AATV,ABS - Lahey Clinic,358,0,358,NO,missing,missing,missing,missing,6,3,3,missing,1
177
+ TCGA-HC-7080,International Genomics Consortium,104,0.1,104,NO,missing,New Primary Tumor,894,missing,7,3,4,missing,2
178
+ TCGA-TP-A8TV,Maine Medical Center,249,0.019,249,NO,missing,missing,missing,missing,7,4,3,5,3
179
+ TCGA-EJ-5505,University of Pittsburgh,448,0.1,448,NO,missing,missing,missing,missing,7,4,3,3,3
180
+ TCGA-CH-5765,Indivumed,700,0.02,694,NO,missing,missing,missing,missing,7,3,4,missing,2
181
+ TCGA-EJ-5502,University of Pittsburgh,245,0.1,603,NO,missing,missing,missing,missing,7,4,3,3,3
182
+ TCGA-CH-5762,Indivumed,1339,.01,1313,NO,missing,missing,missing,missing,7,4,3,missing,3
183
+ TCGA-EJ-A46I,University of Pittsburgh,668,0.1,484,NO,missing,missing,missing,missing,7,3,4,missing,2
184
+ TCGA-HI-7168,Fox Chase,2315,0.3,2289,YES,308,Biochemical evidence of disease,missing,308,9,4,5,missing,5
185
+ TCGA-YL-A9WL,PROCURE Biobank,740,6.4,740,YES,740,Biochemical evidence of disease,740,740,9,4,5,3,5
186
+ TCGA-VP-A876,Washington University,2576,0.1,2576,NO,missing,missing,missing,missing,8,3,5,missing,4
187
+ TCGA-EJ-A46G,University of Pittsburgh,93,0.1,93,NO,missing,missing,missing,missing,8,4,4,5,4
188
+ TCGA-G9-6348,Roswell Park,1144,0.02,1136,NO,missing,missing,missing,missing,7,3,4,missing,2
189
+ TCGA-VP-A878,Washington University,2704,0.1,2704,NO,98,Biochemical evidence of disease,98,1843,9,4,5,missing,5
190
+ TCGA-HC-7752,International Genomics Consortium,98,0.1,138,missing,missing,missing,missing,missing,7,3,4,missing,2
191
+ TCGA-V1-A9ZR,University of California San Francisco,177,1.44,54,YES,missing,Biochemical evidence of disease,missing,missing,8,4,4,missing,4
192
+ TCGA-YL-A8HO,PROCURE Biobank,2183,0.01,2168,NO,1068,Biochemical evidence of disease,1068,1068,7,4,3,5,3
193
+ TCGA-X4-A8KQ,Institute for Medical Research,1131,.25,963,NO,missing,Biochemical evidence of disease,missing,883,9,4,5,missing,5
194
+ TCGA-HC-7210,International Genomics Consortium,149,.1,149,missing,missing,missing,missing,missing,7,3,4,missing,2
195
+ TCGA-G9-6333,Roswell Park,1925,0.03,1920,NO,missing,missing,missing,missing,7,4,3,missing,3
196
+ TCGA-G9-6494,Roswell Park,1442,1.13,1423,missing,missing,missing,missing,missing,7,4,3,missing,3
197
+ TCGA-2A-AAYF,Memorial Sloan Kettering Cancer Center,972,.05,972,NO,missing,missing,missing,missing,7,3,4,missing,2
198
+ TCGA-G9-6379,Roswell Park,1393,00.03,1393,NO,missing,missing,missing,missing,7,4,3,5,3
199
+ TCGA-KK-A8I9,MD Anderson Cancer Center,721,0.1,721,NO,missing,Biochemical evidence of disease,940,940,8,4,4,missing,4
200
+ TCGA-EJ-7330,University of Pittsburgh,191,0.1,191,NO,missing,missing,missing,missing,7,4,3,5,3
201
+ TCGA-G9-6377,Roswell Park,518,0.03,518,NO,missing,missing,missing,missing,7,3,4,missing,2
202
+ TCGA-QU-A6IM,Harvard Beth Israel,1247,0.1,896,NO,missing,missing,missing,missing,7,3,4,missing,2
203
+ TCGA-XK-AAIW,Mayo Clinic Arizona,972,0.09,769,NO,missing,New Primary Tumor,427,missing,9,5,4,missing,5
204
+ TCGA-KK-A7B3,MD Anderson Cancer Center,637,0.1,637,NO,missing,Biochemical evidence of disease,294,294,9,4,5,missing,5
205
+ TCGA-KK-A8I7,MD Anderson Cancer Center,1891,0.1,1877,NO,1088,Biochemical evidence of disease,1088,1088,9,4,5,missing,5
206
+ TCGA-CH-5753,Indivumed,31,4.53,31,NO,missing,missing,missing,missing,9,4,5,missing,5
207
+ TCGA-2A-AAYO,Memorial Sloan Kettering Cancer Center,922,.05,922,NO,missing,missing,missing,missing,6,3,3,missing,1
208
+ TCGA-KK-A7B4,MD Anderson Cancer Center,637,0.6,637,YES,637,Biochemical evidence of disease,637,637,9,4,5,missing,5
209
+ TCGA-EJ-7789,University of Pittsburgh,70,missing,missing,missing,missing,missing,missing,missing,7,4,3,5,3
210
+ TCGA-HC-A632,International Genomics Consortium,61,missing,missing,NO,missing,missing,missing,missing,9,4,5,missing,5
211
+ TCGA-CH-5754,Indivumed,62,37.36,62,NO,missing,missing,missing,missing,9,4,5,3,5
212
+ TCGA-G9-6370,Roswell Park,806,0.03,806,NO,missing,missing,missing,missing,7,3,4,missing,2
213
+ TCGA-G9-6339,Roswell Park,2110,0.03,2110,NO,1634,Biochemical evidence of disease,1634,missing,7,3,4,missing,2
214
+ TCGA-V1-A9O5,University of California San Francisco,1776,3.26,1776,YES,124,Biochemical evidence of disease,124,124,9,5,4,missing,5
215
+ TCGA-CH-5761,Indivumed,28,8.49,39,NO,missing,missing,missing,missing,9,5,4,3,5
216
+ TCGA-EJ-5501,University of Pittsburgh,729,0.1,729,NO,missing,missing,missing,missing,7,4,3,5,3
217
+ TCGA-XK-AAJU,Mayo Clinic Arizona,1206,0.09,1206,NO,missing,missing,missing,missing,7,4,3,missing,3
218
+ TCGA-VP-A875,Washington University,805,0.01,867,NO,missing,missing,missing,missing,7,3,4,missing,2
219
+ TCGA-MG-AAMC,BLN - Baylor,173,.01,54,NO,missing,missing,missing,missing,9,4,5,3,5
220
+ TCGA-HC-A8CY,International Genomics Consortium,290,0.9,290,missing,missing,missing,missing,missing,9,5,4,missing,5
221
+ TCGA-G9-6342,Roswell Park,1338,0.05,1338,NO,missing,missing,missing,missing,6,3,3,4,1
222
+ TCGA-YL-A9WH,PROCURE Biobank,427,0.03,349,NO,missing,missing,missing,missing,9,4,5,missing,5
223
+ TCGA-XK-AAJR,Mayo Clinic Arizona,824,0.09,753,YES,131,Biochemical evidence of disease,131,131,7,4,3,5,3
224
+ TCGA-VP-A872,Washington University,3253,0.01,3253,NO,missing,missing,missing,missing,8,5,3,4,4
225
+ TCGA-G9-6499,Roswell Park,1109,0.11,1109,NO,missing,missing,missing,missing,9,4,5,missing,5
226
+ TCGA-CH-5766,Indivumed,31,13.9,39,NO,missing,missing,missing,missing,7,4,3,missing,3
227
+ TCGA-EJ-5506,University of Pittsburgh,356,0.1,356,NO,missing,missing,missing,missing,8,5,3,4,4
228
+ TCGA-YL-A8HL,PROCURE Biobank,1173,0.03,1173,NO,missing,missing,missing,missing,9,4,5,missing,5
229
+ TCGA-FC-7708,Asterand,32,missing,missing,NO,missing,missing,missing,missing,7,4,3,missing,3
230
+ TCGA-HC-7213,International Genomics Consortium,60,4.09,170,YES,170,Biochemical evidence of disease,170,170,9,4,5,missing,5
231
+ TCGA-EJ-5508,University of Pittsburgh,907,0.1,907,NO,missing,missing,missing,missing,7,3,4,4,2
232
+ TCGA-CH-5768,Indivumed,731,0.1,634,NO,missing,missing,missing,missing,6,2,4,3,1
233
+ TCGA-EJ-A46D,University of Pittsburgh,129,.03,122,NO,missing,missing,missing,missing,8,3,5,4,4
234
+ TCGA-YL-A8HK,PROCURE Biobank,1491,1.0,1491,YES,1376,Biochemical evidence of disease,1376,1376,9,4,5,missing,5
235
+ TCGA-YL-A8S9,PROCURE Biobank,1842,0.03,1839,NO,missing,Locoregional Recurrence,1006,missing,9,4,5,3,5
236
+ TCGA-KK-A6E6,MD Anderson Cancer Center,3447,0.1,3447,NO,missing,missing,missing,missing,9,4,5,missing,5
237
+ TCGA-EJ-5497,University of Pittsburgh,405,0.1,204,NO,missing,missing,missing,missing,7,3,4,3,2
238
+ TCGA-V1-A8WL,University of California San Francisco,1375,0.015,1175,NO,missing,missing,missing,missing,7,3,4,missing,2
239
+ TCGA-HC-7740,International Genomics Consortium,53,0,154,missing,missing,missing,missing,missing,7,3,4,missing,2
240
+ TCGA-YL-A8SH,PROCURE Biobank,missing,0.06,617,NO,missing,missing,missing,missing,7,4,3,missing,3
241
+ TCGA-VP-A87J,Washington University,1296,0.13,1296,NO,missing,missing,missing,missing,7,3,4,missing,2
242
+ TCGA-M7-A720,University of North Carolina,302,missing,302,NO,missing,missing,missing,missing,6,3,3,missing,1
243
+ TCGA-HC-A9TH,International Genomics Consortium,295,0.38,295,NO,missing,Biochemical evidence of disease,351,351,9,5,4,5,5
244
+ TCGA-HC-7747,International Genomics Consortium,57,0.19,392,NO,missing,missing,missing,missing,7,3,4,missing,2
245
+ TCGA-YL-A8SO,PROCURE Biobank,3247,0,3247,NO,missing,missing,missing,missing,9,4,5,missing,5
246
+ TCGA-XJ-A83F,University of Kansas,762,0.01,762,NO,missing,missing,missing,missing,7,3,4,missing,2
247
+ TCGA-EJ-5519,University of Pittsburgh,1153,0.2,1153,YES,84,missing,missing,missing,8,4,4,3,4
248
+ TCGA-KK-A6E1,MD Anderson Cancer Center,1659,0.1,356,NO,missing,missing,missing,missing,9,4,5,missing,5
249
+ TCGA-EJ-7314,University of Pittsburgh,295,0.1,295,NO,missing,missing,missing,missing,7,4,3,5,3
250
+ TCGA-KK-A59Z,MD Anderson Cancer Center,1879,0.1,849,NO,missing,missing,missing,missing,7,4,3,missing,3
251
+ TCGA-HC-A76W,International Genomics Consortium,213,0.01,213,NO,missing,missing,missing,missing,7,3,4,missing,2
252
+ TCGA-HC-7749,International Genomics Consortium,60,0.1,102,missing,missing,missing,missing,missing,7,4,3,5,3
253
+ TCGA-YL-A8SA,PROCURE Biobank,512,0.06,467,NO,missing,missing,missing,missing,8,4,4,5,4
254
+ TCGA-VP-A87C,Washington University,1690,0.5,1690,NO,missing,missing,missing,missing,7,4,3,missing,3
255
+ TCGA-G9-6353,Roswell Park,848,0.1,590,NO,missing,missing,missing,missing,7,3,4,missing,2
256
+ TCGA-XJ-A83H,University of Kansas,1280,0.03,1280,NO,missing,missing,missing,missing,7,3,4,missing,2
257
+ TCGA-V1-A8MG,University of California San Francisco,857,0.03,583,NO,missing,missing,missing,missing,7,3,4,missing,2
258
+ TCGA-J4-A67Q,ABS - Lahey Clinic,624,0.1,616,NO,missing,missing,missing,missing,6,3,3,missing,1
259
+ TCGA-EJ-5517,University of Pittsburgh,850,0.1,187,NO,missing,missing,missing,missing,6,3,3,2,1
260
+ TCGA-EJ-5510,University of Pittsburgh,738,0.1,738,NO,missing,missing,missing,missing,7,4,3,3,3
261
+ TCGA-KK-A6E8,MD Anderson Cancer Center,1770,0.1,1769,NO,missing,missing,missing,missing,9,4,5,missing,5
262
+ TCGA-EJ-5499,University of Pittsburgh,533,0.1,533,NO,missing,missing,missing,missing,7,4,3,3,3
263
+ TCGA-FC-A66V,Asterand,122,10.8,-164,NO,missing,missing,missing,missing,7,4,3,missing,3
264
+ TCGA-VP-A87D,Washington University,1853,0.2,1853,YES,1194,Biochemical evidence of disease,1194,missing,9,4,5,missing,5
265
+ TCGA-YL-A8SF,PROCURE Biobank,1373,0.01,1247,NO,missing,missing,missing,missing,8,4,4,5,4
266
+ TCGA-G9-6354,Roswell Park,1501,00.03,525,NO,missing,missing,missing,missing,7,3,4,missing,2
267
+ TCGA-G9-6385,Roswell Park,356,0.064,336,NO,missing,missing,missing,missing,7,3,4,missing,2
268
+ TCGA-XJ-A9DQ,University of Kansas,91,missing,missing,NO,missing,missing,missing,missing,6,3,3,missing,1
269
+ TCGA-EJ-5525,University of Pittsburgh,790,3.0,521,YES,338,Distant Metastasis,546,missing,9,4,5,3,5
270
+ TCGA-CH-5745,Indivumed,91,4.3,84,NO,missing,missing,missing,missing,7,3,4,missing,2
271
+ TCGA-J4-A83L,ABS - Lahey Clinic,316,0.1,316,NO,missing,missing,missing,missing,7,3,4,missing,2
272
+ TCGA-EJ-7328,University of Pittsburgh,170,missing,missing,missing,missing,missing,missing,missing,7,4,3,5,3
273
+ TCGA-HC-A6AN,International Genomics Consortium,49,missing,missing,missing,missing,missing,missing,missing,7,4,3,missing,3
274
+ TCGA-KK-A8IA,MD Anderson Cancer Center,1439,0.1,1383,NO,missing,missing,missing,missing,9,4,5,missing,5
275
+ TCGA-J4-A67M,ABS - Lahey Clinic,488,0.1,482,NO,missing,missing,missing,missing,7,4,3,missing,3
276
+ TCGA-CH-5739,Indivumed,671,0.02,586,NO,missing,missing,missing,missing,7,3,4,missing,2
277
+ TCGA-G9-7521,Roswell Park,487,0.06,487,NO,missing,missing,missing,missing,8,4,4,5,4
278
+ TCGA-G9-6361,Roswell Park,1008,0.1,1002,NO,missing,missing,missing,missing,7,3,4,missing,2
279
+ TCGA-V1-A9OX,University of California San Francisco,256,0.04,256,NO,missing,missing,missing,missing,8,3,5,missing,4
280
+ TCGA-HC-7819,International Genomics Consortium,1,.01,172,missing,missing,missing,missing,missing,8,4,4,4,4
281
+ TCGA-G9-6366,Roswell Park,101,0.1,101,NO,missing,missing,missing,missing,7,4,3,missing,3
282
+ TCGA-HC-8213,International Genomics Consortium,1,missing,missing,missing,missing,missing,missing,missing,6,3,3,missing,1
283
+ TCGA-EJ-5522,University of Pittsburgh,1403,0.1,1403,NO,missing,missing,missing,missing,7,3,4,3,2
284
+ TCGA-J4-A83K,ABS - Lahey Clinic,206,0.1,205,NO,missing,missing,missing,missing,6,3,3,missing,1
285
+ TCGA-KK-A8IF,MD Anderson Cancer Center,804,0.7,788,YES,648,Biochemical evidence of disease,648,missing,7,4,3,missing,3
286
+ TCGA-HC-8261,International Genomics Consortium,62,missing,missing,missing,missing,missing,missing,missing,7,3,4,missing,2
287
+ TCGA-HC-7817,International Genomics Consortium,32,0.1,171,NO,missing,missing,missing,missing,7,4,3,missing,3
288
+ TCGA-XJ-A9DX,University of Kansas,790,0.05,790,NO,missing,Biochemical evidence of disease,missing,151,9,5,4,missing,5
289
+ TCGA-HC-7078,International Genomics Consortium,162,.01,1409,missing,missing,missing,missing,missing,7,3,4,missing,2
290
+ TCGA-EJ-7321,University of Pittsburgh,233,0.1,128,NO,missing,missing,missing,missing,6,3,3,4,1
291
+ TCGA-EJ-7791,University of Pittsburgh,217,0.1,217,NO,missing,missing,missing,missing,7,3,4,4,2
292
+ TCGA-KK-A8IH,MD Anderson Cancer Center,1635,0.1,1634,NO,missing,missing,missing,missing,7,4,3,5,3
293
+ TCGA-V1-A8WW,University of California San Francisco,709,0.015,695,NO,105,Biochemical evidence of disease,missing,58,9,4,5,missing,5
294
+ TCGA-V1-A8MU,University of California San Francisco,1399,0.015,1384,NO,missing,missing,missing,192,7,3,4,missing,2
295
+ TCGA-HC-7230,International Genomics Consortium,51,3,missing,missing,missing,missing,missing,missing,7,3,4,missing,2
296
+ TCGA-HC-A8D1,International Genomics Consortium,168,0.01,168,NO,missing,missing,missing,missing,7,3,4,missing,2
297
+ TCGA-EJ-7115,University of Pittsburgh,822,0.1,204,NO,missing,missing,missing,missing,7,4,3,2,3
298
+ TCGA-V1-A9OQ,University of California San Francisco,371,0.01,371,NO,missing,missing,missing,missing,6,3,3,missing,1
299
+ TCGA-HC-8266,International Genomics Consortium,35,missing,missing,missing,missing,missing,missing,missing,8,4,4,missing,4
300
+ TCGA-2A-A8VL,Memorial Sloan Kettering Cancer Center,621,0.05,585,NO,missing,missing,missing,missing,6,3,3,4,1
301
+ TCGA-CH-5737,Indivumed,91,14.69,missing,NO,missing,missing,missing,missing,7,4,3,missing,3
302
+ TCGA-KK-A7AU,MD Anderson Cancer Center,1621,0.0,1621,NO,207,Biochemical evidence of disease,207,missing,9,4,5,missing,5
303
+ TCGA-G9-6336,Roswell Park,1669,0.1,1669,NO,missing,missing,missing,missing,7,3,4,missing,2
304
+ TCGA-M7-A71Y,University of North Carolina,158,missing,158,NO,missing,missing,missing,missing,7,3,4,missing,2
305
+ TCGA-HC-A48F,International Genomics Consortium,46,missing,missing,missing,missing,missing,missing,missing,8,4,4,missing,4
306
+ TCGA-EJ-A46E,University of Pittsburgh,524,0.1,503,NO,missing,missing,missing,missing,8,4,4,missing,4
307
+ TCGA-YL-A8HJ,PROCURE Biobank,1611,0.03,1589,NO,missing,missing,missing,missing,9,4,5,3,5
308
+ TCGA-HC-7750,International Genomics Consortium,34,0.1,83,missing,missing,missing,missing,missing,7,3,4,missing,2
309
+ TCGA-YL-A8S8,PROCURE Biobank,1890,1.36,1890,YES,679,Biochemical evidence of disease,679,679,9,4,5,missing,5
310
+ TCGA-EJ-A46B,University of Pittsburgh,162,0.1,157,NO,missing,missing,missing,missing,8,4,4,3,4
311
+ TCGA-YL-A8HM,PROCURE Biobank,1124,0.03,1124,NO,missing,Biochemical evidence of disease,1473,1473,9,4,5,missing,5
312
+ TCGA-X4-A8KS,Institute for Medical Research,846,.01,797,NO,missing,missing,missing,missing,7,3,4,missing,2
313
+ TCGA-HC-7212,International Genomics Consortium,41,.28,424,missing,missing,Biochemical evidence of disease,missing,396,7,3,4,missing,2
314
+ TCGA-G9-6496,Roswell Park,1014,0.03,703,NO,missing,missing,missing,missing,7,4,3,missing,3
315
+ TCGA-J4-AATZ,ABS - Lahey Clinic,412,0,386,NO,79,Biochemical evidence of disease,79,missing,9,4,5,missing,5
316
+ TCGA-CH-5769,Indivumed,62,11.16,60,NO,missing,missing,missing,missing,9,5,4,missing,5
317
+ TCGA-EJ-5509,University of Pittsburgh,1102,0.1,1102,NO,missing,missing,missing,missing,7,3,4,3,2
318
+ TCGA-YL-A9WI,PROCURE Biobank,1259,0.03,1259,NO,missing,missing,missing,missing,9,4,5,missing,5
319
+ TCGA-G9-6343,Roswell Park,554,0.03,554,NO,missing,missing,missing,missing,7,4,3,missing,3
320
+ TCGA-2A-AAYU,Memorial Sloan Kettering Cancer Center,615,.05,269,NO,missing,missing,missing,missing,6,3,3,4,1
321
+ TCGA-G9-6498,Roswell Park,1608,00.03,1608,NO,1342,Biochemical evidence of disease,1342,missing,7,3,4,missing,2
322
+ TCGA-TP-A8TT,Maine Medical Center,362,0.024,237,NO,missing,missing,missing,missing,7,4,3,missing,3
323
+ TCGA-EJ-5507,University of Pittsburgh,182,0.1,182,NO,missing,missing,missing,missing,9,4,5,4,5
324
+ TCGA-CH-5767,Indivumed,458,0.04,377,NO,missing,missing,missing,missing,7,4,3,missing,3
325
+ TCGA-G9-6338,Roswell Park,1649,0.05,1634,missing,missing,missing,missing,missing,7,4,3,missing,3
326
+ TCGA-QU-A6IP,Harvard Beth Israel,2620,0,2620,NO,missing,missing,missing,missing,6,3,3,missing,1
327
+ TCGA-XK-AAJT,Mayo Clinic Arizona,1126,0.09,566,NO,missing,missing,missing,missing,7,4,3,5,3
328
+ TCGA-EJ-7788,University of Pittsburgh,52,0.2,52,NO,missing,missing,missing,missing,7,3,4,5,2
329
+ TCGA-G9-6371,Roswell Park,846,0.03,846,NO,missing,missing,missing,missing,6,3,3,missing,1
330
+ TCGA-QU-A6IL,Harvard Beth Israel,97,0.2,91,NO,missing,missing,missing,missing,7,3,4,missing,2
331
+ TCGA-KK-A5A1,MD Anderson Cancer Center,2364,0.1,420,NO,missing,Locoregional Recurrence,203,missing,9,4,5,missing,5
332
+ TCGA-XK-AAIV,Mayo Clinic Arizona,958,0.32,85,NO,missing,missing,missing,missing,10,5,5,missing,5
333
+ TCGA-KK-A7B2,MD Anderson Cancer Center,692,0.3,845,NO,missing,Biochemical evidence of disease,692,692,9,4,5,missing,5
334
+ TCGA-KK-A8I6,MD Anderson Cancer Center,668,0.2,668,NO,missing,missing,missing,missing,7,4,3,missing,3
335
+ TCGA-HC-A4ZV,International Genomics Consortium,23,missing,missing,missing,missing,missing,missing,missing,9,5,4,missing,5
336
+ TCGA-EJ-5532,University of Pittsburgh,926,0.1,926,NO,missing,missing,missing,missing,7,3,4,3,2
337
+ TCGA-CH-5752,Indivumed,943,0.02,868,NO,missing,missing,missing,missing,8,4,4,missing,4
338
+ TCGA-G9-6378,Roswell Park,664,0.03,223,NO,missing,missing,missing,missing,7,3,4,missing,2
339
+ TCGA-VP-AA1N,Washington University,542,0.01,542,NO,missing,missing,missing,missing,9,5,4,missing,5
340
+ TCGA-V1-A9ZK,University of California San Francisco,1049,0.01,1049,NO,missing,missing,missing,missing,8,4,4,missing,4
341
+ TCGA-KK-A8I8,MD Anderson Cancer Center,774,0.1,757,NO,missing,missing,missing,missing,9,4,5,missing,5
342
+ TCGA-EJ-7331,University of Pittsburgh,9,0.8,189,YES,189,missing,missing,missing,7,3,4,3,2
343
+ TCGA-EJ-7786,University of Pittsburgh,79,0.1,79,NO,missing,missing,missing,missing,7,3,4,3,2
344
+ TCGA-XK-AAK1,Mayo Clinic Arizona,614,0.09,614,NO,missing,missing,missing,missing,7,4,3,missing,3
345
+ TCGA-XK-AAJA,Mayo Clinic Arizona,930,0.09,712,NO,missing,missing,missing,missing,7,4,3,missing,3
346
+ TCGA-V1-A8WV,University of California San Francisco,686,0.01,686,NO,missing,missing,missing,missing,9,4,5,missing,5
347
+ TCGA-YL-A8SR,PROCURE Biobank,213,0.06,222,NO,missing,missing,missing,missing,9,4,5,3,5
348
+ TCGA-EJ-7327,University of Pittsburgh,175,0.1,175,NO,missing,missing,missing,missing,7,3,4,5,2
349
+ TCGA-XQ-A8TA,University of Sao Paulo,missing,323.0,62,YES,missing,missing,missing,missing,10,5,5,missing,5
350
+ TCGA-EJ-7797,University of Pittsburgh,187,0.1,187,NO,missing,missing,missing,missing,7,3,4,4,2
351
+ TCGA-HC-7231,International Genomics Consortium,72,missing,missing,missing,missing,missing,missing,missing,7,3,4,missing,2
352
+ TCGA-HC-A8D0,International Genomics Consortium,110,0.01,110,NO,missing,missing,missing,missing,7,3,4,missing,2
353
+ TCGA-HC-8260,International Genomics Consortium,106,0.01,106,NO,missing,missing,missing,missing,7,3,4,missing,2
354
+ TCGA-FC-A5OB,Asterand,273,5.22,110,NO,missing,missing,missing,missing,9,4,5,missing,5
355
+ TCGA-G9-6369,Roswell Park,851,0.03,851,NO,missing,missing,missing,missing,7,4,3,missing,3
356
+ TCGA-HC-7079,International Genomics Consortium,126,0.1,126,missing,missing,Biochemical evidence of disease,380,380,7,3,4,missing,2
357
+ TCGA-KK-A8II,MD Anderson Cancer Center,missing,39.8,2891,YES,626,Biochemical evidence of disease,626,626,9,4,5,missing,5
358
+ TCGA-V1-A9OY,University of California San Francisco,170,0.099,170,NO,missing,missing,missing,missing,7,4,3,missing,3
359
+ TCGA-J4-A67K,ABS - Lahey Clinic,662,0.1,557,NO,missing,missing,missing,missing,7,4,3,missing,3
360
+ TCGA-HC-7818,International Genomics Consortium,45,0.01,99,missing,missing,missing,missing,missing,7,3,4,missing,2
361
+ TCGA-G9-6367,Roswell Park,875,0.42,836,missing,missing,missing,missing,missing,9,4,5,3,5
362
+ TCGA-HC-8212,International Genomics Consortium,1017,3.27,640,missing,missing,Biochemical evidence of disease,missing,missing,7,3,4,missing,2
363
+ TCGA-CH-5743,Indivumed,425,0.1,394,NO,missing,New Primary Tumor,425,missing,7,3,4,missing,2
364
+ TCGA-HC-7077,International Genomics Consortium,77,.83,1749,missing,missing,missing,missing,missing,6,3,3,missing,1
365
+ TCGA-J4-A83J,ABS - Lahey Clinic,310,0.04,235,NO,missing,missing,missing,missing,7,3,4,missing,2
366
+ TCGA-KK-A8IG,MD Anderson Cancer Center,2211,0.1,2211,NO,missing,missing,missing,missing,7,4,3,missing,3
367
+ TCGA-CH-5744,Indivumed,60,9.63,48,NO,missing,missing,missing,missing,7,4,3,5,3
368
+ TCGA-EJ-5524,University of Pittsburgh,834,0.1,811,NO,missing,Locoregional Recurrence,265,1155,9,4,5,3,5
369
+ TCGA-HC-A6AO,International Genomics Consortium,167,missing,missing,missing,missing,missing,missing,missing,7,4,3,missing,3
370
+ TCGA-J4-A83M,ABS - Lahey Clinic,437,0.2,437,NO,missing,Biochemical evidence of disease,521,521,7,4,3,missing,3
371
+ TCGA-J4-A67L,ABS - Lahey Clinic,518,.01,518,NO,missing,missing,missing,missing,7,3,4,missing,2
372
+ TCGA-CH-5738,Indivumed,212,0.01,195,NO,missing,missing,missing,missing,6,3,3,4,1
373
+ TCGA-2A-A8W3,Memorial Sloan Kettering Cancer Center,771,.36,771,YES,198,Biochemical evidence of disease,missing,198,9,4,5,missing,5
374
+ TCGA-KK-A7AZ,MD Anderson Cancer Center,840,missing,missing,missing,missing,missing,missing,missing,7,4,3,missing,3
375
+ TCGA-EJ-5511,University of Pittsburgh,788,0.04,788,NO,missing,missing,missing,missing,7,3,4,4,2
376
+ TCGA-2A-A8VX,Memorial Sloan Kettering Cancer Center,1033,0.05,1033,NO,missing,missing,missing,missing,8,4,4,missing,4
377
+ TCGA-EJ-5498,University of Pittsburgh,537,0.1,537,NO,missing,missing,missing,missing,7,4,3,3,3
378
+ TCGA-G9-6329,Roswell Park,923,0.03,923,NO,missing,missing,missing,missing,7,3,4,missing,2
379
+ TCGA-XJ-A9DK,University of Kansas,275,0.10,275,NO,missing,missing,missing,missing,8,4,4,missing,4
380
+ TCGA-VP-A87E,Washington University,2037,0.11,2037,NO,missing,missing,missing,missing,6,3,3,missing,1
381
+ TCGA-G9-6384,Roswell Park,390,0.03,390,NO,missing,missing,missing,missing,7,3,4,missing,2
382
+ TCGA-HC-7748,International Genomics Consortium,62,0.1,99,missing,missing,missing,missing,missing,6,3,3,missing,1
383
+ TCGA-J4-A6G3,ABS - Lahey Clinic,528,0.4,528,NO,missing,Biochemical evidence of disease,618,618,8,4,4,missing,4
384
+ TCGA-VP-A87B,Washington University,2309,3.37,2309,NO,missing,New Primary Tumor,2473,2310,8,4,4,3,4
385
+ TCGA-HC-A6AS,International Genomics Consortium,44,missing,missing,missing,missing,missing,missing,missing,7,3,4,missing,2
386
+ TCGA-V1-A8MF,University of California San Francisco,1254,0.14,1218,NO,missing,missing,missing,missing,6,3,3,missing,1
387
+ TCGA-EJ-5516,University of Pittsburgh,783,0.12,730,NO,missing,missing,missing,missing,7,3,4,3,2
388
+ TCGA-M7-A721,University of North Carolina,204,missing,162,NO,missing,missing,missing,missing,7,3,4,missing,2
389
+ TCGA-HC-A76X,International Genomics Consortium,150,0.01,150,NO,missing,missing,missing,missing,7,3,4,missing,2
390
+ TCGA-Y6-A9XI,University of Arizona,526,0.06,519,NO,missing,missing,missing,missing,8,4,4,missing,4
391
+ TCGA-XJ-A83G,University of Kansas,1157,0.01,1126,NO,missing,missing,missing,missing,7,4,3,5,3
392
+ TCGA-V1-A9OL,University of California San Francisco,589,0.01,559,NO,131,Biochemical evidence of disease,105,105,9,5,4,missing,5
393
+ TCGA-EJ-5518,University of Pittsburgh,1195,0.1,1195,NO,missing,missing,missing,missing,9,4,5,4,5
394
+ TCGA-G9-A9S0,Roswell Park,missing,10.87,759,YES,429,Distant Metastasis,423,missing,8,4,4,5,4
395
+ TCGA-KK-A6E0,MD Anderson Cancer Center,913,0.3,941,YES,941,Biochemical evidence of disease,941,missing,9,4,5,missing,5
396
+ TCGA-EJ-7315,University of Pittsburgh,289,0.1,289,NO,missing,missing,missing,missing,7,4,3,5,3
397
+ TCGA-J4-A6M7,ABS - Lahey Clinic,279,0.1,279,NO,missing,missing,missing,missing,7,3,4,missing,2
398
+ TCGA-G9-A9S7,Roswell Park,643,0.13,643,NO,missing,missing,missing,missing,8,4,4,missing,4
399
+ TCGA-2A-A8VV,Memorial Sloan Kettering Cancer Center,671,0.05,560,NO,missing,missing,missing,missing,6,3,3,4,1
400
+ TCGA-KK-A6E7,MD Anderson Cancer Center,2040,0.1,1847,NO,missing,Biochemical evidence of disease,925,925,9,5,4,missing,5
401
+ TCGA-EJ-5496,University of Pittsburgh,595,0.1,595,NO,missing,missing,missing,missing,7,3,4,4,2
402
+ TCGA-HC-7741,International Genomics Consortium,1752,0.1,146,NO,missing,Biochemical evidence of disease,missing,1969,7,3,4,missing,2
403
+ TCGA-YL-A8SI,PROCURE Biobank,1441,0.48,1441,NO,1423,Biochemical evidence of disease,1423,1423,9,4,5,missing,5
404
+ TCGA-VP-A87K,Washington University,655,0.3,655,YES,473,Biochemical evidence of disease,533,467,8,4,4,missing,4