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license: cc-by-4.0 |
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Two datasets, namely diet_conditions_20240411 and crispr_screen_20240615, are included. Image files for each |
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dataset are archived into several .tar files. Inside each .tar file, the name of each image file is |
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the ID of the cell. |
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The imaging channels of each file are Alb, polyT, rRNA, M6PR, CathB, Perilipin, |
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Sqstm1, LC3b, TOMM20, Calreticulin, pS6RP, Na+/K+ATPase, SNAP23, TOM70, Rab7, mtRNA, Vimentin, Gapdh. |
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The RNA expression levels, spatial coordinates, and conditions of individual cells of the diet_conditions_20240411 dataset are in |
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the RNA_scaled_diet_conditions_20240411.h5ad file. The protein intensity levels are in the |
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protein_intensities_diet_conditions_20240411.h5ad file. |
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The RNA expression levels, spatial coordinates, and perturbation information of individual cells of the crispr_screen_20240615 dataset |
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are in the RNA_scaled_crispr_screen_20240615.h5ad file. The protein intensity levels are in the |
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protein_intensities_crispr_screen_20240615.h5ad file (only for cells with targeting or control guide RNAs). |
