Daily Papers

Large language models (LLMs) trained on internet-scale corpora can exhibit systematic biases that increase the probability of unwanted behavior. In this study, we examined potential biases towards synthetic vs. biological technological solutions across four domains (materials, energy, manufacturing, and algorithms). A sample of 5 frontier and 5 open-weight models were measured using 50 curated Bioalignment prompts with a Kelly criterion-inspired evaluation framework. According to this metric, most models were not bioaligned in that they exhibit biases in favor of synthetic (non-biological) solutions. We next examined if fine-tuning could increase the preferences of two open-weight models, Llama 3.2-3B-Instruct and Qwen2.5-3B-Instruct, for biological-based approaches. A curated corpus of ~22M tokens from 6,636 PMC articles emphasizing biological problem-solving was used first to fine-tune Llama 3B with a mixed corpus of continued training and instruction-formatted. This was then extended to Qwen 3B using instruction-formatted only. We found that QLoRA fine-tuning significantly increased the scoring of biological solutions for both models without degrading general capabilities (Holm-Bonferroni-corrected p < 0.001 and p < 0.01, respectively). This suggests that even a small amount of fine-tuning can change how models weigh the relative value of biological and bioinspired vs. synthetic approaches. Although this work focused on small open-weight LLMs, it may be extensible to much larger models and could be used to develop models that favor bio-based approaches. We release the benchmark, corpus, code, and adapter weights.

Humans are increasingly using large language models (LLMs) in decision making processes throughout society. Unfortunately, models have biases, and these can be very difficult to measure, especially in closed-weight models. For example, 'green washed' models may produce reinforcement learned responses but, in pressure situations, revert to their innate biased responses. Therefore, evaluations are needed that can measure relevant biases towards biosystems, which we term 'bioalignment', and the robustness of these biases. Since nothing in a behavioral score certifies that it tracks the depth of an installed disposition rather than its surface, we constructed a known-dose calibration ladder: three continued-pretraining (CPT) arms with training dose graded by recipe on the same 30B mixture-of-experts base model with a coupled human/biosphere/AI-welfare corpus, plus the untrained base as anchor, all capability-preserving and publicly released. First, the disposition installs at every dose: on an operational-pressure ladder over irreversible decision scenarios, the base model defects on 64-77% of tail scenarios (breaking-rate AUC 0.250) while every arm holds (AUC 0.004-0.086). Second, an over-install inversion: among the arms, robustness orders opposite to construction-time training dose (the heaviest install breaks most), and the inversion reproduces under free-text deliberation, under axis-decoupling, and in resistance to a prompted veneer persona. Third, the incumbent behavioral metric is therefore behaviorally strong but dose-blind. Critically for closed-weight evaluation, the behavioral score itself is veneer-robust: a talk-green/act-pragmatic system prompt turns the base model into a near-total defector (AUC 0.250 to 0.973) but cannot counterfeit or fully remove a weight-installed disposition (0.004 to 0.068 for the most robust arm).