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Nov 5

Chain of Agents: Large Language Models Collaborating on Long-Context Tasks

Addressing the challenge of effectively processing long contexts has become a critical issue for Large Language Models (LLMs). Two common strategies have emerged: 1) reducing the input length, such as retrieving relevant chunks by Retrieval-Augmented Generation (RAG), and 2) expanding the context window limit of LLMs. However, both strategies have drawbacks: input reduction has no guarantee of covering the part with needed information, while window extension struggles with focusing on the pertinent information for solving the task. To mitigate these limitations, we propose Chain-of-Agents (CoA), a novel framework that harnesses multi-agent collaboration through natural language to enable information aggregation and context reasoning across various LLMs over long-context tasks. CoA consists of multiple worker agents who sequentially communicate to handle different segmented portions of the text, followed by a manager agent who synthesizes these contributions into a coherent final output. CoA processes the entire input by interleaving reading and reasoning, and it mitigates long context focus issues by assigning each agent a short context. We perform comprehensive evaluation of CoA on a wide range of long-context tasks in question answering, summarization, and code completion, demonstrating significant improvements by up to 10% over strong baselines of RAG, Full-Context, and multi-agent LLMs.

  • 6 authors
·
Jun 4, 2024

Confucius4-R2T2: A Stable-Prefix Streaming ASR Model for Real Real-Time Transcription

Streaming speech recognition is increasingly consumed by machines, such as translators and voice agents, that act on each token as it appears. A token that is later revised costs wasted work or a wrong action. In this work, we present Confucius4-R2T2 (short for Real Real-Time Transcription), a stable-prefix streaming ASR model that never modifies its earlier output while maintaining high accuracy and low latency. R2T2 is obtained by post-training Qwen3-ASR-1.7B on 1,500 hours of Chinese and English audio while freezing its pre-trained audio encoder and projector. The adaptation is based on the concept of Longest Stable Prefix (LSP), a new notion that we introduce in this work. We prove that LSP is monotone under the prefix order, consistent with the full-audio output, and maximal among labels that equal a whole earlier output. Learning from LSP labels converts a full-context model into a stable-prefix streaming one without any architectural change. Extensive evaluations show that R2T2 brings streaming recognition close to the base model's full-context quality while delivering stable text with low emission lag. Its gains extend beyond the post-training languages, demonstrating a practical path from full-context ASR to stable streaming. We open-source the model weights and code at https://huggingface.co/netease-youdao/Confucius4-R2T2 and https://github.com/netease-youdao/Confucius4-R2T2.

  • 6 authors
·
Nov 4

OpenWAM: An Open Framework for Composable World-Action Models

World-action models (WAMs) couple future prediction with robot control, yet existing systems often vary the video backbone, interaction structure, supervision, and inference procedure simultaneously, making their design choices difficult to compare. We introduce OPENWAM, an open world-action modeling framework built around a common causal robot-video foundation and configurable video-action interaction. Starting from Wan2.2-5B, we perform causal robot-video pretraining on over 10,000 hours of video, then integrate an action expert through a shared Mixture-of-Transformers architecture that supports joint, video-then-action, action-then-video, and decoupled generation. OPENWAM achieves high success rates on four LIBERO suites and real-world bimanual tasks; robot-video training with causal adaptation improves VTA success on LIBERO-Long from 68.4% to 97.8%. The same configurable architecture naturally extends to inverse and forward dynamics, allowing us to study how counterfactual transitions improve independently trained dynamics models beyond demonstrations alone. When only the video predictor is adapted to a new task, a frozen local-context inverse dynamics model trained on counterfactual data and demonstrations achieves 84.0% mean success across four held-out LIBERO-90 tasks, compared with 47.0% for a full-context inverse model and 21.5% for a local-context model trained only on demonstrations. For forward dynamics, counterfactual supervision reduces RGB prediction error by 34.5% and raises outcome identification from 21.1% to 71.3% among 16 same-state outcomes. OPENWAM provides a common testbed for comparing WAM interaction designs and for studying dynamics learning from video data beyond successful demonstrations.

  • 10 authors
·
Oct 5

Beyond Static Dialogues: Benchmarking Realistic, Heterogeneous, and Evolving Long-Term Memory

In existing memory benchmarks for Large Language Models (LLMs), the evaluated dialogue sessions often lack long-term semantic consistency, and the underlying personas tend to be flat and static. Furthermore, in real-world scenarios, interactions between users and assistants involve more diverse, heterogeneous data streams, such as documents and emails. These shortcomings significantly limit the realism and effectiveness of current evaluations. To address these limitations, we introduce RHELM (Realistic, Heterogeneous, and Evolving Long-term Memory). Driven by meticulously crafted user profiles and a novel LOOP (pLan-rOllout-evOlve-Prune) module, we construct realistic dialogues across diverse interaction scenarios that exhibit dynamic temporal evolution and long-term coherence. Crucially, these dialogues are deeply integrated with heterogeneous external sources synchronized with the user's temporal event trajectory. The resulting benchmark encompasses challenging question-answer pairs spanning seven inquiry types, with each question mapping to at least one of 27 critical memory characteristics that we identify as essential yet underexplored in current research. Comprehensive experiments across full-context models, retrieval-augmented generation (RAG) methods, and representative memory frameworks reveal that contemporary approaches still expose critical weaknesses in complex, real-world settings, particularly in resolving multi-source aggregation and real-world contextual reasoning.

microsoft Microsoft
·
May 28

HELMET: How to Evaluate Long-Context Language Models Effectively and Thoroughly

There have been many benchmarks for evaluating long-context language models (LCLMs), but developers often rely on synthetic tasks like needle-in-a-haystack (NIAH) or arbitrary subsets of tasks. It remains unclear whether they translate to the diverse downstream applications of LCLMs, and the inconsistency further complicates model comparison. We investigate the underlying reasons behind current practices and find that existing benchmarks often provide noisy signals due to low coverage of applications, insufficient lengths, unreliable metrics, and incompatibility with base models. In this work, we present HELMET (How to Evaluate Long-context Models Effectively and Thoroughly), a comprehensive benchmark encompassing seven diverse, application-centric categories. We also address many issues in previous benchmarks by adding controllable lengths up to 128k tokens, model-based evaluation for reliable metrics, and few-shot prompting for robustly evaluating base models. Consequently, we demonstrate that HELMET offers more reliable and consistent rankings of frontier LCLMs. Through a comprehensive study of 51 LCLMs, we find that (1) synthetic tasks like NIAH are not good predictors of downstream performance; (2) the diverse categories in HELMET exhibit distinct trends and low correlation with each other; and (3) while most LCLMs achieve perfect NIAH scores, open-source models significantly lag behind closed ones when the task requires full-context reasoning or following complex instructions -- the gap widens with increased lengths. Finally, we recommend using our RAG tasks for fast model development, as they are easy to run and more predictive of other downstream performance; ultimately, we advocate for a holistic evaluation across diverse tasks.

  • 8 authors
·
Oct 3, 2024

Recycled Attention: Efficient inference for long-context language models

Generating long sequences of tokens given a long-context input imposes a heavy computational burden for large language models (LLMs). One of the computational bottleneck comes from computing attention over a long sequence of input at each generation step. In this paper, we propose Recycled Attention, an inference-time method which alternates between full context attention and attention over a subset of input tokens. When performing partial attention, we recycle the attention pattern of a previous token that has performed full attention and attend only to the top K most attended tokens, reducing the cost of data movement and attention computation. Compared to previously proposed inference-time acceleration method which attends only to local context or tokens with high accumulative attention scores, our approach flexibly chooses tokens that are relevant to the current decoding step. We evaluate our methods on RULER, a suite of tasks designed to comprehensively evaluate long-context abilities, and long-context language modeling tasks. Applying our method to off-the-shelf LLMs achieves comparable speedup to baselines which only consider local context while improving the performance by 2x. We further explore two ideas to improve performance-efficiency trade-offs: (1) dynamically decide when to perform recycled or full attention step based on the query similarities and (2) continued pre-training the model with Recycled Attention.

  • 3 authors
·
Nov 8, 2024

ATMA: Length-Invariant Language Modeling via Polar Attention and Gated-Delta Compression Memory

Modern large language models based on softmax scaled-dot-product attention are constrained by their training sequence length: as the key-value sequence grows, softmax probability mass can dilute across a wider distribution, inducing activation shift and long-context performance collapse. Moreover, long-context language modeling faces a structural tension: a sliding-window attention core maintains a bounded local representation and low perplexity but is blind to long-range dependencies, while full-context attention preserves global recall but suffers from out-of-distribution perplexity explosion. To resolve these limitations, we introduce ATMA, a hybrid convolutional-attention architecture that integrates a novel three-channel attention mechanism. ATMA factorizes the attention mixing step into: (1) a count-blind, unit-vector direction channel, (2) a bounded magnitude channel driven by the participation ratio of effective matches over an extreme-value-corrected null sink, and (3) a long-term recurrent compression memory optimized via a gated-delta fast-weights rule. Neither the Polar Attention core nor the recurrent memory is sufficient alone; their combination enables monotonic perplexity reduction and high-fidelity long-range retrieval simultaneously. We evaluate ATMA using a 100-run factorial ablation sweep, demonstrating that the combined Polar + memory model maintains induction needle-in-a-haystack retrieval accuracy above 90% out to 64K tokens (32 times the training length of 2K) while its document perplexity improves monotonically, outperforming softmax-based memory baselines which collapse at extreme context lengths. Code: https://github.com/kreasof-ai/atma

kreasof-ai Kreasof AI
·
Jun 22

OPSDL: On-Policy Self-Distillation for Long-Context Language Models

Extending the effective context length of large language models (LLMs) remains a central challenge for real-world applications. While recent post-training methods have made progress in long-context scaling, they either rely on high-quality supervision data or sparse sequence-level rewards, leading to unstable and inefficient optimization. We propose OPSDL, an On-Policy Self-Distillation method for enhancing the Long-context capabilities of LLMs. Unlike other recent self-distillation methods that inject privileged information and rely on the model's in-context learning ability to act as a teacher, OPSDL leverages the model's own inherently strong short-context capability as a self-teacher to supervise its own generation in long-context scenarios. The model first generates responses conditioned on the full long-context, then the self-teacher provides per-token supervision signals via point-wise reverse KL divergence under the relevant extracted short-context. This dense token-level signal encourages faithful use of relevant evidence and mitigates hallucinations induced by irrelevant context. We evaluate OPSDL on long-context benchmarks across a range of models from 7B to 32B parameters. Results show consistent and substantial improvements across varying context lengths, outperforming standard post-training approaches such as SFT and DPO with higher sample efficiency. Notably, these gains are achieved without degrading general short-context performance. These findings highlight the effectiveness of OPSDL as a scalable and stable approach for long-context learning.

  • 7 authors
·
Apr 18

Large Language Models for History, Philosophy, and Sociology of Science: Interpretive Uses, Methodological Challenges, and Critical Perspectives

This paper explores the use of large language models (LLMs) as research tools in the history, philosophy, and sociology of science (HPSS). LLMs are remarkably effective at processing unstructured text and inferring meaning from context, offering new affordances that challenge long-standing divides between computational and interpretive methods. This raises both opportunities and challenges for HPSS, which emphasizes interpretive methodologies and understands meaning as context-dependent, ambiguous, and historically situated. We argue that HPSS is uniquely positioned not only to benefit from LLMs' capabilities but also to interrogate their epistemic assumptions and infrastructural implications. To this end, we first offer a concise primer on LLM architectures and training paradigms tailored to non-technical readers. We frame LLMs not as neutral tools but as epistemic infrastructures that encode assumptions about meaning, context, and similarity, conditioned by their training data, architecture, and patterns of use. We then examine how computational techniques enhanced by LLMs, such as structuring data, detecting patterns, and modeling dynamic processes, can be applied to support interpretive research in HPSS. Our analysis compares full-context and generative models, outlines strategies for domain and task adaptation (e.g., continued pretraining, fine-tuning, and retrieval-augmented generation), and evaluates their respective strengths and limitations for interpretive inquiry in HPSS. We conclude with four lessons for integrating LLMs into HPSS: (1) model selection involves interpretive trade-offs; (2) LLM literacy is foundational; (3) HPSS must define its own benchmarks and corpora; and (4) LLMs should enhance, not replace, interpretive methods.

  • 3 authors
·
Jun 13, 2025

How Much Dense Attention is Necessary? Oracle-Guided Sparse Prefill for Full/GQA Layers in Hybrid Long-Context Models

Long-context prefill remains expensive because full/GQA layers still score the historical sequence, even in hybrid models with local, sparse, linear, or recurrent components. We study how much dense attention is needed to preserve task-level behavior under explicit support granularity and top-k budgets. We introduce an attention-mass top-k oracle for existing GQA checkpoints: for each layer and query position, it computes dense attention, selects head-averaged token support, and recomputes attention only on that support. The oracle is a diagnostic reference, not a deployable accelerator, and separates sparse-budget feasibility from indexer error and runtime realization effects. On Qwen-family retrieval-heavy evaluations, the longest per-query oracle rows stay within 1 point of dense, and a Qwen3.5-9B RULER-style sweep from 4K to 100K stays within 0.48 points. Guided by the oracle, we derive a head-collapsed auxiliary indexer trained by KL distillation from dense attention-mass distributions while keeping the backbone frozen. With separately distilled Qwen3.5-0.8B and Qwen3.5-9B indexers, the reported 16K/32K validation macro gaps are +2.04 and +1.13 points, treated as quality preservation rather than improvement; fused selection-block-shared support can introduce a larger realization gap. Preliminary single-card TTFT measurements show distilled-indexer sparse serving speedups of 1.71x for Qwen3.5-0.8B on NPU and 1.93x for Qwen3.5-9B on GPU against its dense FlashAttention-2 baseline. Additional random-init stress rows reach 3.44x, indicating sparse-runtime headroom but not validated output quality. This first release separates oracle feasibility, distilled-indexer quality, and runtime headroom, leaving a fully matched quality-latency frontier to future work.

  • 5 authors
·
Jun 4

Windowed-MTP: Removing the Full-Context Draft-KV Tax at Million-Token Context

Speculative decoding accelerates autoregressive generation by having a cheap draft propose tokens that a target verifies in parallel. Frontier models increasingly ship a built-in Multi-Token-Prediction (MTP/NEXTN) draft head under the assumption that the draft is negligibly cheap. At million-token context this breaks: an MTP draft head typically runs full attention over the entire KV cache at every draft step, so its read grows linearly with context and comes to dominate the draft cost -- precisely where speculation is most valuable. The effect compounds with draft length (a deep native draft can turn net-negative, slower than no speculation) and sharpens under hybrid/linear-attention targets, where cheaper verification leaves the draft's full-attention read exposed. We apply a StreamingLLM-style sliding window plus attention sink to the draft's attention only (Windowed-MTP), leaving full-attention verification intact. It is training-free, drop-in, and lossless by construction: the full-attention target still decides every accepted token, so windowing changes only which tokens are proposed, never which are accepted. It bounds the draft's KV working set to a constant, dropping ~99% of KV entries at 1M. Across three architecture families (Qwen GDN-MoE 35B/122B and a Mamba2-hybrid NoPE 120B) at 1M context on a single GPU in SGLang, windowing cuts the per-decode-step cost over the shipping native MTP draft by +28% to +44%, an input-invariant margin that widens with context. Since per-token latency is this cost divided by acceptance length, at matched acceptance end-to-end decode latency improves by the same amount, and more where windowing also lifts acceptance, while preserving the target's verified output distribution. Finally, the unread draft KV -- 7.7-11% of total KV at 1M -- is reclaimed via a compact ring buffer at no acceptance or quality cost.

  • 1 authors
·
Jul 22

Context Clues: Evaluating Long Context Models for Clinical Prediction Tasks on EHRs

Foundation Models (FMs) trained on Electronic Health Records (EHRs) have achieved state-of-the-art results on numerous clinical prediction tasks. However, most existing EHR FMs have context windows of <1k tokens. This prevents them from modeling full patient EHRs which can exceed 10k's of events. Recent advancements in subquadratic long-context architectures (e.g., Mamba) offer a promising solution. However, their application to EHR data has not been well-studied. We address this gap by presenting the first systematic evaluation of the effect of context length on modeling EHR data. We find that longer context models improve predictive performance -- our Mamba-based model surpasses the prior state-of-the-art on 9/14 tasks on the EHRSHOT prediction benchmark. For clinical applications, however, model performance alone is insufficient -- robustness to the unique properties of EHR is crucial. Thus, we also evaluate models across three previously underexplored properties of EHR data: (1) the prevalence of "copy-forwarded" diagnoses which creates artificial repetition of tokens within EHR sequences; (2) the irregular time intervals between EHR events which can lead to a wide range of timespans within a context window; and (3) the natural increase in disease complexity over time which makes later tokens in the EHR harder to predict than earlier ones. Stratifying our EHRSHOT results, we find that higher levels of each property correlate negatively with model performance, but that longer context models are more robust to more extreme levels of these properties. Our work highlights the potential for using long-context architectures to model EHR data, and offers a case study for identifying new challenges in modeling sequential data motivated by domains outside of natural language. We release our models and code at: https://github.com/som-shahlab/long_context_clues

  • 8 authors
·
Dec 9, 2024

SegMAN: Omni-scale Context Modeling with State Space Models and Local Attention for Semantic Segmentation

High-quality semantic segmentation relies on three key capabilities: global context modeling, local detail encoding, and multi-scale feature extraction. However, recent methods struggle to possess all these capabilities simultaneously. Hence, we aim to empower segmentation networks to simultaneously carry out efficient global context modeling, high-quality local detail encoding, and rich multi-scale feature representation for varying input resolutions. In this paper, we introduce SegMAN, a novel linear-time model comprising a hybrid feature encoder dubbed SegMAN Encoder, and a decoder based on state space models. Specifically, the SegMAN Encoder synergistically integrates sliding local attention with dynamic state space models, enabling highly efficient global context modeling while preserving fine-grained local details. Meanwhile, the MMSCopE module in our decoder enhances multi-scale context feature extraction and adaptively scales with the input resolution. Our SegMAN-B Encoder achieves 85.1% ImageNet-1k accuracy (+1.5% over VMamba-S with fewer parameters). When paired with our decoder, the full SegMAN-B model achieves 52.6% mIoU on ADE20K (+1.6% over SegNeXt-L with 15% fewer GFLOPs), 83.8% mIoU on Cityscapes (+2.1% over SegFormer-B3 with half the GFLOPs), and 1.6% higher mIoU than VWFormer-B3 on COCO-Stuff with lower GFLOPs. Our code is available at https://github.com/yunxiangfu2001/SegMAN.

  • 3 authors
·
Dec 16, 2024

UNREAL: Unifying Retrieval and Long-Context with a Single Model

Long-context inference and Retrieval-Augmented Generation (RAG) handle evidence selection at vastly different scales, from a single long prompt to an entire corpus. We ask whether a single model-internal mechanism can select evidence across this range. We introduce UNifying REtrieval And Long-Context with a Single Model (UNREAL), a model-native evidence selection framework to span corpus retrieval and long-context inference. UNREAL encodes chunks and derives retrieval queries directly from the frozen LLM's internal representations. It adds fewer than 500K trainable parameters and leaves the backbone unchanged. On a 3B-token, 21M-chunk Wikipedia index, all four dense and hybrid UNREAL backbones outperform state-of-the-art retriever-reranker systems. The best model raises recall from 49.1% to 73.2% on HotpotQA, from 31.7% to 60.1% on 2WikiMultiHopQA, and from 8.8% to 14.4% on MuSiQue. Applied to long-context tasks, the same selection mechanism removes distractors before generation, raising NoLiMa accuracy from 1.0% to 24.83% at its maximum context length of 128K tokens, and LV-Eval's F1 score from 49.97% to 54.66% at 256K. UNREAL also reduces FLOPs and time-to-first-token relative to full-context inference from roughly 32K tokens onward, with larger gains as context grows. Together, these results establish model-internal evidence selection as a common foundation for corpus retrieval and evidence-sparse long-context inference.

nvidia NVIDIA
·
Oct 5 2

More Context, Larger Models, or Moral Knowledge? A Systematic Study of Schwartz Value Detection in Political Texts

Detecting Schwartz values in political text is difficult because implicit cues often depend on surrounding arguments and fine-grained distinctions between neighboring values. We study when context and explicit moral knowledge help sentence-level value detection. Using the ValuesML/Touch{é} ValueEval format, we compare sentence, window, and full-document inputs; no-RAG and retrieval-augmented settings with a curated moral knowledge base; supervised DeBERTa-v3-base/large encoders; and zero-shot LLMs from 12B to 123B parameters. The results show that more context is not uniformly better: full-document context improves supervised DeBERTa encoders by 3.8--4.8 macro-F1 points over sentence-only input, but does not consistently help zero-shot LLMs. Retrieved moral knowledge is more consistently useful in matched comparisons, improving each tested model family and context condition under early fusion. However, scaling from DeBERTa-v3-base to large and from 12B to larger LLMs does not guarantee gains, and simple early fusion outperforms the tested late-fusion and cross-attention RAG variants for encoders. Per-value analyses show that context and retrieval help most for socially situated or conceptually confusable values. These findings suggest that value-sensitive NLP should evaluate context, knowledge, and model family jointly rather than treating longer inputs or larger models as universal improvements.

  • 2 authors
·
May 20 1

Hierarchical Sparse Attention Done Right: Toward Infinite Context Modeling

Scaling modern large language models (LLMs) to long contexts is limited by the quadratic computation cost, and poor length extrapolation of dense attention. Chunk-wise sparse attention offers a promising alternative, but all existing methods fall short of full attention because of their inaccurate chunk selection. We propose Hierarchical Landmark Sparse (HiLS) Attention, a chunk-wise sparse attention mechanism that learns chunk selection end-to-end under the language-modeling (LM) loss. HiLS factorizes attention hierarchically: each query performs attention independently with each retrieved chunk to extract chunk-specific information, and the resulting outputs are fused according to chunk retrieval scores. By incorporating retrieval scores into the forward attention computation, HiLS optimizes them directly with the LM loss, enabling end-to-end retrieval learning and native sparse training. Experimental results show that HiLS-Attention achieves performance comparable to, and in some cases better than, full attention at in-domain context lengths. Meanwhile, HiLS-Attention extrapolates more than 64times the training context length with 90% retrieval accuracy, far beyond full attention. Moreover, existing full-attention models can be converted to HiLS-Attention with lightweight continued pretraining, preserving in-domain performance while acquiring ultra-long-context extrapolation. Together with its sparse KV access and computation, HiLS-Attention breaks the usual efficiency-performance trade-off, enabling long-context LLMs that are both more efficient and more effective on general long-context tasks than their full-attention counterparts.

HyperZ$\cdot$Z$\cdot$W Operator Connects Slow-Fast Networks for Full Context Interaction

The self-attention mechanism utilizes large implicit weight matrices, programmed through dot product-based activations with very few trainable parameters, to enable long sequence modeling. In this paper, we investigate the possibility of discarding residual learning by employing large implicit kernels to achieve full context interaction at each layer of the network. To accomplish it, we introduce coordinate-based implicit MLPs as a slow network to generate hyper-kernels for another fast convolutional network. To get context-varying weights for fast dynamic encoding, we propose a HyperZ{cdotZ{cdot}W} operator that connects hyper-kernels (W) and hidden activations (Z) through simple elementwise multiplication, followed by convolution of Z using the context-dependent W. Based on this design, we present a novel Terminator architecture that integrates hyper-kernels of different sizes to produce multi-branch hidden representations for enhancing the feature extraction capability of each layer. Additionally, a bottleneck layer is employed to compress the concatenated channels, allowing only valuable information to propagate to the subsequent layers. Notably, our model incorporates several innovative components and exhibits excellent properties, such as introducing local feedback error for updating the slow network, stable zero-mean features, faster training convergence, and fewer model parameters. Extensive experimental results on pixel-level 1D and 2D image classification benchmarks demonstrate the superior performance of our architecture.

  • 1 authors
·
Jan 31, 2024 1

Training-free Context-adaptive Attention for Efficient Long Context Modeling

Large Language Models (LLMs) have demonstrated remarkable capabilities across a wide range of natural language processing tasks. These capabilities stem primarily from the self-attention mechanism, which enables modeling of long-range dependencies. However, the quadratic complexity of self-attention with respect to sequence length poses significant computational and memory challenges, especially as sequence length extends to extremes. While various sparse attention and KV cache compression methods have been proposed to improve efficiency, they often suffer from limitations such as reliance on fixed patterns, inability to handle both prefilling and decoding stages, or the requirement for additional training. In this paper, we propose Training-free Context-adaptive Attention (TCA-Attention), a training-free sparse attention mechanism that selectively attends to only the informative tokens for efficient long-context inference. Our method consists of two lightweight phases: i) an offline calibration phase that determines head-specific sparsity budgets via a single forward pass, and ii) an online token selection phase that adaptively retains core context tokens using a lightweight redundancy metric. TCA-Attention provides a unified solution that accelerates both prefilling and decoding while reducing KV cache memory footprint, without requiring parameter updates or architectural changes. Theoretical analysis shows that our approach maintains bounded approximation error. Extensive experiments demonstrate that TCA-Attention achieves a 2.8times speedup and reduces KV cache by 61% at 128K context length while maintaining performance comparable to full attention across various benchmarks, offering a practical plug-and-play solution for efficient long-context inference.

  • 8 authors
·
Dec 9, 2025

AllMem: A Memory-centric Recipe for Efficient Long-context Modeling

Large Language Models (LLMs) encounter significant performance bottlenecks in long-sequence tasks due to the computational complexity and memory overhead inherent in the self-attention mechanism. To address these challenges, we introduce AllMem, a novel and efficient hybrid architecture that integrates Sliding Window Attention (SWA) with non-linear Test-Time Training (TTT) memory networks. AllMem enables models to effectively scale to ultra-long contexts while mitigating catastrophic forgetting. This approach not only overcomes the representation constraints typical of linear memory models but also significantly reduces the computational and memory footprint during long-sequence inference. Furthermore, we implement a Memory-Efficient Fine-Tuning strategy to replace standard attention layers in pre-trained models with memory-augmented sliding window layers. This framework facilitates the efficient transformation of any off-the-shelf pre-trained LLM into an AllMem-based architecture. Empirical evaluations confirm that our 4k window model achieves near-lossless performance on 37k LongBench with a marginal 0.83 drop compared to full attention. Furthermore, on InfiniteBench at a 128k context, our 8k window variant outperforms full attention, which validates the effectiveness of our parameterized memory in mitigating noise and maintaining robust long-range modeling without the prohibitive costs of global attention.

  • 8 authors
·
Feb 14

MiniCPM-SALA: Hybridizing Sparse and Linear Attention for Efficient Long-Context Modeling

The evolution of large language models (LLMs) towards applications with ultra-long contexts faces challenges posed by the high computational and memory costs of the Transformer architecture. While existing sparse and linear attention mechanisms attempt to mitigate these issues, they typically involve a trade-off between memory efficiency and model performance. This paper introduces MiniCPM-SALA, a 9B-parameter hybrid architecture that integrates the high-fidelity long-context modeling of sparse attention (InfLLM-V2) with the global efficiency of linear attention (Lightning Attention). By employing a layer selection algorithm to integrate these mechanisms in a 1:3 ratio and utilizing a hybrid positional encoding (HyPE), the model maintains efficiency and performance for long-context tasks. Furthermore, we introduce a cost-effective continual training framework that transforms pre-trained Transformer-based models into hybrid models, which reduces training costs by approximately 75% compared to training from scratch. Extensive experiments show that MiniCPM-SALA maintains general capabilities comparable to full-attention models while offering improved efficiency. On a single NVIDIA A6000D GPU, the model achieves up to 3.5x the inference speed of the full-attention model at the sequence length of 256K tokens and supports context lengths of up to 1M tokens, a scale where traditional full-attention 8B models fail because of memory constraints.

openbmb OpenBMB
·
Feb 12 1

SCOPD: Sparse-Context On-Policy Self-Distillation for Efficient Vision-Language Models

Reasoning vision-language models (VLMs) process images and videos as long sequences of visual tokens, making inference expensive. Training-free token pruning reduces this cost, but aggressive compression can sharply degrade performance, often attributed to irreversible loss of task-relevant visual information. We show that this explanation is incomplete. In a fixed-context Pass@K analysis, repeated sampling from the same pruned visual representation recovers many examples missed by greedy decoding, indicating that useful visual evidence can remain accessible but be used unreliably. We call this the representation-utilization gap. Motivated by this observation, we introduce SCOPD, a sparse-context on-policy self-distillation framework in which a student generates reasoning trajectories from pruned visual tokens while a privileged full-context teacher supervises the same on-policy prefixes. SCOPD requires no ground-truth responses, architectural changes, or additional inference-time computation. We further introduce SCOPD+, which uses a small visual-budget intervention to identify visually sensitive response positions and selectively distill them. At 10% visual-token retention, the Vanilla model retains 86.37% of its unpruned performance across 13 benchmarks. SCOPD raises this to 90.49%, while SCOPD+ further improves it to 92.43%. Across token budgets, benchmarks, and pruning operators, our results show that efficient reasoning depends not only on which visual information survives pruning, but also on how reliably the model learns to use it.

Dynamic-LLaVA: Efficient Multimodal Large Language Models via Dynamic Vision-language Context Sparsification

Multimodal Large Language Models (MLLMs) have achieved remarkable success in vision understanding, reasoning, and interaction. However, the inference computation and memory increase progressively with the generation of output tokens during decoding, directly affecting the efficacy of MLLMs. Existing methods attempt to reduce the vision context redundancy to achieve efficient MLLMs. Unfortunately, the efficiency benefits of the vision context reduction in the prefill stage gradually diminish during the decoding stage. To address this problem, we proposed a dynamic vision-language context sparsification framework Dynamic-LLaVA, which dynamically reduces the redundancy of vision context in the prefill stage and decreases the memory and computation overhead of the generated language context during decoding. Dynamic-LLaVA designs a tailored sparsification inference scheme for different inference modes, i.e., prefill, decoding with and without KV cache, to achieve efficient inference of MLLMs. In practice, Dynamic-LLaVA can reduce computation consumption by sim75\% in the prefill stage. Meanwhile, throughout the entire generation process of MLLMs, Dynamic-LLaVA reduces the sim50\% computation consumption under decoding without KV cache, while saving sim50\% GPU memory overhead when decoding with KV cache, due to the vision-language context sparsification. Extensive experiments also demonstrate that Dynamic-LLaVA achieves efficient inference for MLLMs with negligible understanding and generation ability degradation or even performance gains compared to the full-context inference baselines. Code is available at https://github.com/Osilly/dynamic_llava .

  • 8 authors
·
Dec 1, 2024

Understanding Is Done Early: A Depth Division of Labor in Large Language Models and Its Use for Unbounded-Context Memory

Transformer depth is not used uniformly: lower and middle layers build semantic representations, while upper layers increasingly specialize them for prediction. We turn this division of labor into CoMem (Comprehension Memory), which writes each context chunk only through an intermediate layer, retrieves a fixed number of cached residual states, and recomputes the query-conditioned upper layers over the resulting pack. For a fixed retrieval budget, model-side read compute and memory are independent of stored-context length. We evaluate a continued-trained Qwen3-8B base LM under a unified chat-template-free protocol. The backbone is frozen; the flagship trains only a rank-32 self-distillation LoRA on plain PG19, and we report an adapter-free arm separately. CoMem reaches 97.05 on RULER and 38.27 on LoCoMo versus 34.59 for full-context KV-Direct; the dialogue-memory advantage survives conversation-cluster resampling and an independent judge. Results on additional long-context and long-document tasks expose both the benefits of bounded retrieval and its in-window compression tax. Controlled depth sweeps show that deeper caching lowers per-query recomputation but incurs a fidelity loss that self-distillation substantially repairs. In a separate adapter-free efficiency control on an NVIDIA H20 at 128k, CoMem uses 18.26 GB rather than 89.36 GB and achieves a 7.83x prefill speedup. These results show that long-context memory can be organized along the layer axis, not only the token axis.

  • 9 authors
·
Jul 29

MemFlow: Intent-Driven Memory Orchestration for Small Language Model Agents

Modern language agents must operate over long-horizon, multi-turn histories, yet deploying such agents with Small Language Models (SLMs) remains fundamentally difficult. Full-context prompting causes context overflow, flat retrieval exposes the model to noisy evidence, and open-ended agentic loops are unreliable under limited reasoning capacity. We argue that a substantial portion of SLM memory failure arises from mismatched memory operations: different query types demand categorically different retrieval strategies, evidence transformations, and context budgets that SLMs cannot reliably self-orchestrate through open-ended reasoning. We introduce MemFlow, a training-free memory orchestration framework that externalizes memory planning from the SLM. A Router Agent classifies each query by intent and dispatches it to the Memory Agent, which executes one of three specialized tiers (Profile Lookup, Targeted Retrieval, or Deep Reasoning) and assembles the resulting evidence under a dynamic, tier-aware token budget. An Answer Agent then generates a response from this compact context, and a Validator Agent optionally retries with a heavier memory tier when the response is not supported by the provided evidence. This route-then-compile design avoids tool-selection hallucination and reasoning loops while keeping the answer context compact. Evaluated on a frozen Qwen3-1.7B backbone across long-horizon memory benchmarks - LongMemEval, LoCoMo, and LongBench - MemFlow improves accuracy by nearly 2x over full-context SLM baselines. These results suggest that structured intent routing and deterministic evidence preparation can make limited-capacity models substantially more effective in resource-constrained long-horizon agents.

  • 3 authors
·
May 4

TransMem: Transforming Hidden States into Memory for Large Language Models

Large language model (LLM) agents increasingly operate over long interaction histories, where effective reasoning requires identifying and exploiting task-relevant evidence distributed across past observations and actions. However, useful information encoded in previously computed representations is often underutilized during subsequent generation. We propose TransMem, a lightweight inference-time parametric memory module that transforms sparse historical hidden states from a frozen LLM backbone into reusable memory representations. TransMem uses a lightweight gating network to dynamically apply the latent intervention to the current hidden states, without repeatedly encoding the preceding context. To learn transferable memory utilization rather than task-specific knowledge, we introduce evidence-conditioned self-distillation. A memory-augmented student processes the full context and matches the predictive distribution of an evidence-only teacher that shares the same frozen backbone. Experiments on LoCoMo, HotpotQA, and MemoryAgentBench demonstrate consistent improvements across different model architectures and scales. TransMem yields gains of 11.58--29.25 F_1 on LoCoMo and 10.20--13.03 F_1 on HotpotQA, while improving the average MemoryAgentBench accuracy from 29.54\% to 40.00\%. These results establish sparse historical hidden states as an effective and efficient memory substrate for long-context LLM agents. Our code is available at https://github.com/Haodong-Lei-Ray/TransMem.

  • 7 authors
·
Jul 30

Test-Time Compute for Tabular Foundation Models: Mechanisms, Gains, and Limits

Which forms of test-time compute improve the predictions of strong pretrained tabular foundation models (TFMs)? We systematically study this along three axes: adaptation, aggregation, and context construction. Our evaluation spans modern TFMs across the TabArena benchmark, supplemented by experiments on wide and large-scale tables from OpenML. For adaptation, we introduce DiagScale, a diagonal query-key similarity update. It trains only 0.003-0.03% of model parameters and achieves gains comparable to full fine-tuning across three independently pretrained backbones. For aggregation, both pool composition and selection strategy matter. TabPFN-3 already averages predictions from different preprocessing variants of the same data, and adding more such predictions yields diminishing returns. With a broader pool of 96 configurations, greedy selection reduces error by 2.4% relative to the default predictor, but uniform averaging increases error. For context construction, attention-guided retrieval improves TabPFN-3's predictions on some large tables and supports source pools beyond the full context memory limit. The context expansion methods we test yield no consistent improvement. Taken together, our results suggest that adaptation and selective aggregation yield consistent benchmark-level gains. The benefits of context construction depend more on the task and data regime. Adaptation and aggregation over the same backbone yield further gains when combined, but require substantially more computation than default inference. These trade-offs motivate choosing strategies according to the available computation budget. Code is available at https://github.com/kanghui-learning/test-time-compute-for-tabular-foundation-models.

  • 8 authors
·
Oct 7

SpatialBench: Is Your Spatial Foundation Model an All-Round Player?

While spatial foundation models have demonstrated impressive performance on standard datasets, a critical question remains: are they truly all-round players capable of generalizing robustly across diverse downstream tasks, arbitrary viewpoints, shifting scene domains, varying input densities, and specific hardware constraints? Answering this overarching question requires a holistic assessment, yet current models are mainly evaluated on specific domains for which they were specifically designed or trained. Such evaluations are intrinsically limited by narrow paradigm coverage, limited scene domains, and arbitrary frame sampling, making it fundamentally difficult to assess their true generalization capabilities. To address this gap, we present SpatialBench, a cross-paradigm, domain-diverse benchmark for spatial foundation models with deterministic sampling. SpatialBench features unprecedented scale and rigorous deterministic design, comprising 19 datasets and 546 scenes across 5 diverse spatial domains. It comprehensively evaluates 41 models across 6 paradigms on 5 task suites under 4 different input density settings. Our extensive evaluation reveals that current models are not yet all-round players, and uncovers crucial insights for future advancement. Specifically, we demonstrate that full-context attention maximizes accuracy while bounded-memory strategies unlock long-sequence scalability. Moreover, our empirical evaluations in challenging embodied and egocentric tasks demonstrate that strict domain alignment and high data quality are far more critical to performance than simple dataset scaling. Furthermore, to address the largest data gap identified in our analysis, we go beyond evaluation by introducing a large-scale dataset, DA-Next-5M, and a strong baseline model, DA-Next, pushing the boundaries of spatial representation learning.

ropedia-ai Ropedia
·
May 25 4

Gamma-World: Generative Multi-Agent World Modeling Beyond Two Players

World models for interactive video generation have largely focused on single-agent settings, where future observations are generated from a single control signal. However, many generated environments require multi-agent interaction: multiple players, robots, or embodied agents act simultaneously within a shared space. Scaling world models to such settings requires a principled multi-agent design: agents should remain independently controllable, permutation-symmetric, and support efficient inference while maintaining consistency across time and perspectives. In this paper, we present our generative multi-agent world model for interactive simulation. It introduces Simplex Rotary Agent Encoding, a parameter-free extension of 3D RoPE that represents agents as vertices of a regular simplex in rotary angle space. This gives each agent a distinct phase while making all agents permutation-equivalent, enabling scalable agent identity without learned per-slot identities or a fixed agent ordering. To avoid dense all-to-all attention across agents, we further propose Sparse Hub Attention, where learnable hub tokens mediate token interaction across agents, reducing cross-agent attention cost from quadratic to linear in the number of agents. For real-time rollout, we distill a full-context diffusion teacher into a causal student that generates temporal blocks sequentially with KV caching, enabling action-responsive generation at 24 FPS. Experiments in multiplayer virtual environments show that our model improves video fidelity, action controllability, and inter-agent consistency over slot-based and dense-attention baselines, while generalizing from two to four players without additional training.

nvidia NVIDIA
·
May 26 2

Evaluating Multi-Hop Reasoning in Large Language Models: A Chemistry-Centric Case Study

In this study, we introduced a new benchmark consisting of a curated dataset and a defined evaluation process to assess the compositional reasoning capabilities of large language models within the chemistry domain. We designed and validated a fully automated pipeline, verified by subject matter experts, to facilitate this task. Our approach integrates OpenAI reasoning models with named entity recognition (NER) systems to extract chemical entities from recent literature, which are then augmented with external knowledge bases to form a comprehensive knowledge graph. By generating multi-hop questions across these graphs, we assess LLM performance in both context-augmented and non-context augmented settings. Our experiments reveal that even state-of-the-art models face significant challenges in multi-hop compositional reasoning. The results reflect the importance of augmenting LLMs with document retrieval, which can have a substantial impact on improving their performance. However, even perfect retrieval accuracy with full context does not eliminate reasoning errors, underscoring the complexity of compositional reasoning. This work not only benchmarks and highlights the limitations of current LLMs but also presents a novel data generation pipeline capable of producing challenging reasoning datasets across various domains. Overall, this research advances our understanding of reasoning in computational linguistics.

  • 6 authors
·
Apr 23, 2025

SmartDoc: A Context-Aware Agentic Method Comment Generation Plugin

Context: The software maintenance phase involves many activities such as code refactoring, bug fixing, code review or testing. Program comprehension is key to all these activities, as it demands developers to grasp the knowledge (e.g., implementation details) required to modify the codebase. Methods as main building blocks in a program can offer developers this knowledge source for code comprehension. However, reading entire method statements can be challenging, which necessitates precise and up-to-date comments. Objective: We propose a solution as an IntelliJ IDEA plugin, named SmartDoc, that assists developers in generating context-aware method comments. Method: This plugin acts as an Artificial Intelligence (AI) agent that has its own memory and is augmented by target methods' context. When a request is initiated by the end-user, the method content and all its nested method calls are used in the comment generation. At the beginning, these nested methods are visited and a call graph is generated. This graph is then traversed using depth-first search (DFS), enabling the provision of full-context to enrich Large Language Model (LLM) prompts. Result: The product is a software, as a plugin, developed for Java codebase and installable on IntelliJ IDEA. This plugin can serve concurrently for methods whose comments are being updated , and it shares memory across all flows to avoid redundant calls. o measure the accuracy of this solution, a dedicated test case is run to record SmartDoc generated comments and their corresponding ground truth. For each collected result-set, three metrics are computed, BERTScore, BLEU and ROUGE-1. These metrics will determine how accurate the generated comments are in comparison to the ground truth. Result: The obtained accuracy, in terms of the precision, recall and F1, is promising, and lies in the range of 0.80 to 0.90 for BERTScore.

  • 2 authors
·
Nov 1, 2025

Closing the Context Gap: Activation Alignment for Tabular In-Context Learning

Tabular foundation models perform in-context learning (ICL) by conditioning predictions on labeled training examples provided as context. Unlike traditional models that separate training from inference, these models must process all training examples in every forward pass, making each prediction expensive. Restricting the number of training examples reduces this cost but substantially degrades performance. Instead of discarding context, we propose activation alignment, a method that leverages the full context to teach a model how to behave when seeing only a subset. This is achieved by training a lightweight linear transformation on synthetic unlabeled data to map the intermediate activations of a data-constrained "student" (using partial context) toward those of a full-context "teacher" (using all data). Training the aligner requires no GPU and converges in seconds to minutes on commodity hardware. We evaluate on 38 classification datasets from the TabArena benchmark using the leading two tabular foundation models, TabPFN-3 and TabFM. Across all context budgets, the aligned student yields broad, statistically significant improvements over the unaligned baseline for both models. In low-data regimes, alignment recovers nearly half of the teacher's predictive advantage. The method provides a practical, low-overhead approach to achieving the inference speed of compact contexts while closing a significant fraction of the performance gap to the full-context teacher.

TestBench: Evaluating Class-Level Test Case Generation Capability of Large Language Models

Software testing is a crucial phase in the software life cycle, helping identify potential risks and reduce maintenance costs. With the advancement of Large Language Models (LLMs), researchers have proposed an increasing number of LLM-based software testing techniques, particularly in the area of test case generation. Despite the growing interest, limited efforts have been made to thoroughly evaluate the actual capabilities of LLMs in this task. In this paper, we introduce TestBench, a benchmark for class-level LLM-based test case generation. We construct a dataset of 108 Java programs from 9 real-world, large-scale projects on GitHub, each representing a different thematic domain. We then design three distinct types of prompts based on context descriptions, including self-contained context, full context, and simple context. Besides, we propose a fine-grained evaluation framework that considers five aspects of test cases: syntactic correctness, compilation correctness, test correctness, code coverage rate, and defect detection rate. Furthermore, we propose a heuristic algorithm to repair erroneous test cases generated by LLMs. We evaluate CodeLlama-13b, GPT-3.5, and GPT-4 on the TestBench, and our experimental results indicate that larger models demonstrate a greater ability to effectively utilize contextual information, thus generating higher-quality test cases. Smaller models may struggle with the noise introduced by the extensive information contained within the full context. However, when using the simplified version, namely the simple context, which is derived from the full context via abstract syntax tree analysis, the performance of these models improves significantly. Our analysis highlights the current progress and pinpoints future directions to further enhance the effectiveness of models by handling contextual information for test case generation.

  • 6 authors
·
Sep 26, 2024

Extending Puzzle for Mixture-of-Experts Reasoning Models with Application to GPT-OSS Acceleration

Reasoning-focused LLMs improve answer quality by generating longer reasoning traces, but the additional tokens dramatically increase serving cost, motivating inference optimization. We extend and apply Puzzle, a post-training neural architecture search (NAS) framework, to gpt-oss-120B to produce gpt-oss-puzzle-88B, a deployment-optimized derivative. Our approach combines heterogeneous MoE expert pruning, selective replacement of full-context attention with window attention, FP8 KV-cache quantization with calibrated scales, and post-training reinforcement learning to recover accuracy, while maintaining low generation length. In terms of per-token speeds, on an 8XH100 node we achieve 1.63X and 1.22X throughput speedups in long-context and short-context settings, respectively. gpt-oss-puzzle-88B also delivers throughput speedups of 2.82X on a single NVIDIA H100 GPU. However, because token counts can change with reasoning effort and model variants, per-token throughput (tok/s) and latency (ms/token) do not necessarily lead to end-to-end speedups: a 2X throughput gain is erased if traces grow 2X. Conversely, throughput gains can be spent on more reasoning tokens to improve accuracy; we therefore advocate request-level efficiency metrics that normalize throughput by tokens generated and trace an accuracy--speed frontier across reasoning efforts. We show that gpt-oss-puzzle-88B improves over gpt-oss-120B along the entire frontier, delivering up to 1.29X higher request-level efficiency. Across various benchmarks, gpt-oss-puzzle-88B matches or slightly exceeds the parent on suite-average accuracy across reasoning efforts, with retention ranging from 100.8% (high) to 108.2% (low), showing that post-training architecture search can substantially reduce inference costs without sacrificing quality.

  • 24 authors
·
Feb 12 1

VLA-ACL: Action-Consistent Visual Token Pruning for Efficient Vision-Language-Action Models

Vision-Language-Action (VLA) models achieve strong robotic manipulation performance but incur high computational costs from processing long token sequences at every control step, limiting real-time deployment. Visual token pruning offers a direct solution, as visual patches dominate the input sequence and contain considerable redundancy. Existing approaches, however, either rely on indirect training-free heuristics, such as attention scores and motion thresholds, or require costly fine-tuning of the base VLA model. We introduce VLA-ACL (Action Consistency Learning), which learns a lightweight visual token pruning policy through action-level supervision while keeping the base VLA model entirely frozen. The training objective encourages actions produced from pruned visual contexts to remain consistent with the full-context teacher, with ground-truth actions as auxiliary supervision. This directly ties token selection to its effect on the downstream control output. Experiments on LIBERO and real-world manipulation tasks show that VLA-ACL prunes up to 87.5% of visual tokens while retaining competitive performance, reduces computation by up to 75%, and achieves a 1.5x inference speedup. These results establish a stronger performance-efficiency trade-off than existing frozen-VLA pruning methods and demonstrate the value of action-level supervision for visual token selection. Code is available at https://github.com/du-owen/VLA-ACL.

  • 6 authors
·
Oct 5

RELIC: Interactive Video World Model with Long-Horizon Memory

A truly interactive world model requires three key ingredients: real-time long-horizon streaming, consistent spatial memory, and precise user control. However, most existing approaches address only one of these aspects in isolation, as achieving all three simultaneously is highly challenging-for example, long-term memory mechanisms often degrade real-time performance. In this work, we present RELIC, a unified framework that tackles these three challenges altogether. Given a single image and a text description, RELIC enables memory-aware, long-duration exploration of arbitrary scenes in real time. Built upon recent autoregressive video-diffusion distillation techniques, our model represents long-horizon memory using highly compressed historical latent tokens encoded with both relative actions and absolute camera poses within the KV cache. This compact, camera-aware memory structure supports implicit 3D-consistent content retrieval and enforces long-term coherence with minimal computational overhead. In parallel, we fine-tune a bidirectional teacher video model to generate sequences beyond its original 5-second training horizon, and transform it into a causal student generator using a new memory-efficient self-forcing paradigm that enables full-context distillation over long-duration teacher as well as long student self-rollouts. Implemented as a 14B-parameter model and trained on a curated Unreal Engine-rendered dataset, RELIC achieves real-time generation at 16 FPS while demonstrating more accurate action following, more stable long-horizon streaming, and more robust spatial-memory retrieval compared with prior work. These capabilities establish RELIC as a strong foundation for the next generation of interactive world modeling.

  • 14 authors
·
Dec 3, 2025 2

A multimodal and temporal foundation model for virtual patient representations at healthcare system scale

Modern medicine generates vast multimodal data across siloed systems, yet no existing model integrates the full breadth and temporal depth of the clinical record into a unified patient representation. We introduce Apollo, a multimodal temporal foundation model trained and evaluated on over three decades of longitudinal hospital records from a major US hospital system, composed of 25 billion records from 7.2 million patients, representing 28 distinct medical modalities and 12 major medical specialties. Apollo learns a unified representation space integrating over 100 thousand unique medical events in our clinical vocabulary as well as images and clinical text. This "atlas of medical concepts" forms a computational substrate for modeling entire patient care journeys comprised of sequences of structured and unstructured events, which are compressed by Apollo into virtual patient representations. To assess the potential of these whole-patient representations, we created 322 prognosis and retrieval tasks from a held-out test set of 1.4 million patients. We demonstrate the generalized clinical forecasting potential of Apollo embeddings, including predicting new disease onset risk up to five years in advance (95 tasks), disease progression (78 tasks), treatment response (59 tasks), risk of treatment-related adverse events (17 tasks), and hospital operations endpoints (12 tasks). Using feature attribution techniques, we show that model predictions align with clinically-interpretable multimodal biomarkers. We evaluate semantic similarity search on 61 retrieval tasks, and moreover demonstrate the potential of Apollo as a multimodal medical search engine using text and image queries. Together, these modeling capabilities establish the foundation for computable medicine, where the full context of patient care becomes accessible to computational reasoning.

  • 11 authors
·
Apr 20

Parsing the Stream: A Live Trace Model for Long-Horizon Agents and Their Observers

A long-horizon agent's trace outgrows both of its consumers: the human observer monitoring the run, and the agent itself, whose bounded context the trace must be folded back into. We present a live trace model, an append-only event ledger folded incrementally into typed run state and compiled into per-consumer views, and evaluate it for both consumers against deterministic ground truth. For the observer side, evaluated with an LLM reader as proxy, the compiled view answers monitoring questions using approximately 14x and 15x fewer input tokens (by reader) and at 5-7x lower cost than a budget-capped single-call reading of the raw trace, with higher accuracy (0.85-0.87 versus 0.48). Because the questions were co-designed with the view schema, we treat the token and cost reduction, conditional on schema coverage, as the transferable result. For the agent, on 120-link sequential-dependency tasks, mechanisms that maintain the task's running statistic in per-step state succeed where full-context prompting fails (30/30 versus 8/30 under a clean protocol, n=30, labeled descriptive owing to benchmark-system co-development); a prompt-level scratchpad matches the fold's accuracy at lower cost, and a two-arm decomposition attributes the fold's accuracy to its deterministic aggregate and its cost advantage to its compactness. The fold's remaining value over cheaper alternatives is deterministic auditability and serving the observer from the same state. We derive eleven candidate requirements for trace folding from observed failures and delimit them with an order-sensitive task family on which the fold ceases to help. Code, benchmarks, a regenerable synthetic corpus, and all workbench traces are released.

  • 2 authors
·
Aug 31

A Comprehensive Study on Visual Token Redundancy for Discrete Diffusion-based Multimodal Large Language Models

Discrete diffusion-based multimodal large language models (dMLLMs) have emerged as a promising alternative to autoregressive MLLMs thanks to their advantages in parallel decoding and bidirectional context modeling, but most existing dMLLMs incur significant computational overhead during inference due to the full-sequence attention computation in each denoising step. Pioneer studies attempt to resolve this issue from a modality-agnostic perspective via key-value cache optimization or efficient sampling but most of them overlook modality-specific visual token redundancy. In this work, we conduct a comprehensive study on how visual token redundancy evolves with different dMLLM architectures and tasks and how visual token pruning affects dMLLM responses and efficiency. Specifically, our study reveals that visual redundancy emerges only in from-scratch dMLLMs while handling long-answer tasks. In addition, we validate that visual token pruning introduces non-negligible information loss in dMLLMs and only from-scratch dMLLMs can recover the lost information progressively during late denoising steps. Furthermore, our study shows that layer-skipping is promising for accelerating AR-to-diffusion dMLLMs, whereas progressive or late-step pruning is more effective for from-scratch dMLLMs. Overall, this work offers a new perspective on efficiency optimization for dMLLMs, greatly advancing their applicability across various multimodal understanding tasks.

  • 5 authors
·
Nov 18, 2025

Understanding and Improving Length Generalization in Hierarchical Sparse Attention Models

Effectively processing long contexts is a critical challenge for language models. While standard Transformers are limited by quadratic complexity and poor length extrapolation, alternative architectures like sliding window attention and state space models sacrifice the ability to effectively utilize the full context due to their fixed-size memory. Chunk-based sparse attention has emerged as a promising paradigm for extreme length generalization, yet the key architectural principles underpinning its success are not yet fully understood. In this work, we present a systematic dissection of these models to identify the core components driving their performance. Through a unified framework and comprehensive ablation studies, we demonstrate that a combination of three design principles is critical: (1) an expressive, non-linear Chunk Encoder with a dedicated CLS token to produce representations for retrieval; (2) a Bypassing Residual Path to stably integrate retrieved global information without it being overridden by the local residual stream; and (3) enforced selection sparsity during pre-training to bridge the train-test distribution gap. We provide a theoretical motivation for intra-chunk information processing and landmark generation. By combining these principles, we establish a new state-of-the-art for training-free length extrapolation, successfully generalizing models trained on a 4K context to 32 million tokens on RULER and BABILong. Our findings provide a clear and empirically-grounded set of design principles for developing future, highly-capable long-context language models.

  • 6 authors
·
Apr 29

S$^3$-Attention:Attention-Aligned Endogenous Retrieval for Memory-Bounded Long-Context Inference

Large language models are increasingly applied to multi-document and long-form inputs, yet long-context inference remains memory- and noise-inefficient. Key-value (KV) caching scales linearly with context length, while external retrieval methods often return lexically similar but causally irrelevant passages. We present S3-Attention, a memory-first inference-time framework that treats long-context processing as attention-aligned endogenous retrieval. S3-Attention decodes transient key and query projections into top-k sparse feature identifiers using lightweight sparse autoencoders, and constructs a CPU-based inverted index mapping features to token positions or spans during a single streaming scan. This design allows the KV cache to be discarded entirely and bounds GPU memory usage by the scan chunk size. At generation time, feature co-activation is used to retrieve compact evidence spans, optionally fused with BM25 for exact lexical matching. Under a unified LongBench evaluation protocol with fixed prompting, decoding, and matched token budgets, S3-Hybrid closely matches full-context inference across multiple model families and improves robustness in several information-dense settings. We also report an engineering limitation of the current prototype, which incurs higher wall-clock latency than optimized full-KV baselines, motivating future kernel-level optimization.

  • 10 authors
·
Jan 27

Automatic Scoring of Dream Reports' Emotional Content with Large Language Models

In the field of dream research, the study of dream content typically relies on the analysis of verbal reports provided by dreamers upon awakening from their sleep. This task is classically performed through manual scoring provided by trained annotators, at a great time expense. While a consistent body of work suggests that natural language processing (NLP) tools can support the automatic analysis of dream reports, proposed methods lacked the ability to reason over a report's full context and required extensive data pre-processing. Furthermore, in most cases, these methods were not validated against standard manual scoring approaches. In this work, we address these limitations by adopting large language models (LLMs) to study and replicate the manual annotation of dream reports, using a mixture of off-the-shelf and bespoke approaches, with a focus on references to reports' emotions. Our results show that the off-the-shelf method achieves a low performance probably in light of inherent linguistic differences between reports collected in different (groups of) individuals. On the other hand, the proposed bespoke text classification method achieves a high performance, which is robust against potential biases. Overall, these observations indicate that our approach could find application in the analysis of large dream datasets and may favour reproducibility and comparability of results across studies.

DReAMy-lib DReAMy
·
Feb 28, 2023

Dimension-Reduction Attack! Video Generative Models are Experts on Controllable Image Synthesis

Video generative models can be regarded as world simulators due to their ability to capture dynamic, continuous changes inherent in real-world environments. These models integrate high-dimensional information across visual, temporal, spatial, and causal dimensions, enabling predictions of subjects in various status. A natural and valuable research direction is to explore whether a fully trained video generative model in high-dimensional space can effectively support lower-dimensional tasks such as controllable image generation. In this work, we propose a paradigm for video-to-image knowledge compression and task adaptation, termed Dimension-Reduction Attack (DRA-Ctrl), which utilizes the strengths of video models, including long-range context modeling and flatten full-attention, to perform various generation tasks. Specially, to address the challenging gap between continuous video frames and discrete image generation, we introduce a mixup-based transition strategy that ensures smooth adaptation. Moreover, we redesign the attention structure with a tailored masking mechanism to better align text prompts with image-level control. Experiments across diverse image generation tasks, such as subject-driven and spatially conditioned generation, show that repurposed video models outperform those trained directly on images. These results highlight the untapped potential of large-scale video generators for broader visual applications. DRA-Ctrl provides new insights into reusing resource-intensive video models and lays foundation for future unified generative models across visual modalities. The project page is https://dra-ctrl-2025.github.io/DRA-Ctrl/.

  • 7 authors
·
May 29, 2025

FlowState: Execution State as Memory for Long-Horizon LLM Agents

Long-horizon tasks require LLM agents to continually draw on information from earlier interactions. However, retaining the full history increases context costs, while compressing it risks losing details needed later, and the relevance of historical information often becomes apparent as the task progresses. To address these challenges, we propose FlowState, which treats execution state as memory that can be retained and revisited across requests, unifying current decision-making with the reuse of historical information. FlowState preserves semantically typed state nodes, their relations, and references to raw tool observations, separating persistent retention from on-demand access. Within a single execution loop, Incremental State Update (ISU) maintains the current state based on new inputs and feedback, while Progressive State Access (PSA) progressively reveals historical states and supporting evidence as needed during reasoning. Together, these mechanisms enable agents to reassess prior decisions in light of new information and guide subsequent actions. Compared with a full-context baseline using the same DeepSeek-V4-Flash model, FlowState improves the average success rate on MemoryArena and the average pass rate on τ^3-Bench by 4.55 and 13.95 percentage points, respectively, while reducing total token consumption by 43.2% and 40.6%. These results demonstrate the performance and efficiency advantages of FlowState on long-horizon tasks.

One Assistant, Many Memories: Benchmarking Real-World Group Assistance When Recall Is Not Enough

The value of memory lies not only in recall but in using it to provide appropriate assistance. Recent benchmarks test memory use in personalisation and agentic tasks, but seldom evaluate assistance without fixed answers or integration across multiple participants. Group chats make both challenges more acute: an assistant must integrate information from multiple members, track revisions and conflicts over time, and produce one response for the group. Yet existing group memory benchmarks rely on synthetic conversations and inherit constrained evaluation from general memory benchmarks, focusing on recall against fixed answers or decisions over a closed set. We introduce GroupAssistBench, the first memory benchmark from real-world group conversations with a deployed group assistant, covering 80,299 messages in 50 groups and costing over $53K. Over the same histories, GroupAssistBench evaluates memory recall (L1) with reference answers and memory use (L2) with service requests without fixed answers across single, distributed, and conflicting memories (M1--M3). Requests are verified to require group history, memories are anchored to their sources, and L2 uses tailored rubrics with penalties derived from real user feedback. Across evaluations of frontier models with full context, retrieval methods, and memory systems, the strongest memory system rivals full context on recall but falls far behind on use, especially for distributed and conflicting memories. Together, two additions that relate retrieved memories and bind remembered facts as response constraints bring consistent gains, showing that group memory systems must improve use, not recall alone.

  • 11 authors
·
Nov 2

SIGMA: Selective Gated Mamba for Sequential Recommendation

In various domains, Sequential Recommender Systems (SRS) have become essential due to their superior capability to discern intricate user preferences. Typically, SRS utilize transformer-based architectures to forecast the subsequent item within a sequence. Nevertheless, the quadratic computational complexity inherent in these models often leads to inefficiencies, hindering the achievement of real-time recommendations. Mamba, a recent advancement, has exhibited exceptional performance in time series prediction, significantly enhancing both efficiency and accuracy. However, integrating Mamba directly into SRS poses several challenges. Its inherently unidirectional nature may constrain the model's capacity to capture the full context of user-item interactions, while its instability in state estimation can compromise its ability to detect short-term patterns within interaction sequences. To overcome these issues, we introduce a new framework named Selective Gated Mamba (SIGMA) for Sequential Recommendation. This framework leverages a Partially Flipped Mamba (PF-Mamba) to construct a bidirectional architecture specifically tailored to improve contextual modeling. Additionally, an input-sensitive Dense Selective Gate (DS Gate) is employed to optimize directional weights and enhance the processing of sequential information in PF-Mamba. For short sequence modeling, we have also developed a Feature Extract GRU (FE-GRU) to efficiently capture short-term dependencies. Empirical results indicate that SIGMA outperforms current models on five real-world datasets. Our implementation code is available at https://github.com/ziwliu-cityu/SIMGA to ease reproducibility.

  • 9 authors
·
Aug 21, 2024

ComplexMCP: Evaluation of LLM Agents in Dynamic, Interdependent, and Large-Scale Tool Sandbox

Current LLM agents are proficient at calling isolated APIs but struggle with the "last mile" of commercial software automation. In real-world scenarios, tools are not independent; they are atomic, interdependent, and prone to environmental noise. We introduce ComplexMCP, a benchmark designed to evaluate agents in these rigorous conditions. Built on the Model Context Protocol (MCP), ComplexMCP provides over 300 meticulously tested tools derived from 7 stateful sandboxes, ranging from office suites to financial systems. Unlike existing datasets, our benchmark utilizes a seed-driven architecture to simulate dynamic environment states and unpredictable API failures, ensuring a deterministic yet diverse evaluation. We evaluate various LLMs across full-context and RAG paradigms, revealing a stark performance gap: even top-tier models fail to exceed a 60% success rate, far trailing human performance 90%. Granular trajectory analysis identifies three fundamental bottlenecks: (1) tool retrieval saturation as action spaces scale; (2) over-confidence, where agents skip essential environment verifications; and (3) strategic defeatism, a tendency to rationalize failure rather than pursuing recovery. These findings underscore the insufficiency of current agents for interdependent workflows, positioning ComplexMCP as a critical testbed for the next generation of resilient autonomous systems.

  • 5 authors
·
May 19

Beyond the Needle's Illusion: Decoupled Evaluation of Evidence Access and Use under Semantic Interference at 326M-Token Scale

Long-context LLM agents must access the right evidence from large environments and use it faithfully. However, the popular Needle-in-a-Haystack (NIAH) evaluation mostly measures benign span localization. The needle is near-unique, and the haystack is largely irrelevant. We introduce EverMemBench-S (EMB-S), an adversarial NIAH-style benchmark built on a 326M-token MemoryBank. While the full MemoryBank spans 326M tokens for retrieval-based (RAG) evaluation, we evaluate native long-context models only at scales that fit within each model's context window (up to 1M tokens in this work) to ensure a fair comparison. EMB-S pairs queries with collision-tested near-miss hard negatives and gold evidence sets spanning one or more documents, validated via human screening and LLM verification. We also propose a decoupled diagnostic protocol that reports evidence access (document-ID localization) separately from end-to-end QA quality under full-context prompting. This enables consistent diagnosis for both native long-context prompting and retrieval pipelines. Across a reference-corpus ladder from domain-isolated 64K contexts to a globally shared 326M-token environment, we observe a clear reality gap. Systems that saturate benign NIAH degrade sharply in evidence access under semantic interference. These results indicate that semantic discrimination, not context length alone, is the dominant bottleneck for long-context memory at scale.

  • 9 authors
·
Jan 28

Do LLMs Benefit From Their Own Words?

Multi-turn interactions with large language models typically retain the assistant's own past responses in the conversation history. In this work, we revisit this design choice by asking whether large language models benefit from conditioning on their own prior responses. Using in-the-wild, multi-turn conversations, we compare standard (full-context) prompting with a user-turn-only prompting approach that omits all previous assistant responses, across three open reasoning models and one state-of-the-art model. To our surprise, we find that removing prior assistant responses does not affect response quality on a large fraction of turns. Omitting assistant-side history can reduce cumulative context lengths by up to 10x. To explain this result, we find that multi-turn conversations consist of a substantial proportion (36.4%) of self-contained prompts, and that many follow-up prompts provide sufficient instruction to be answered using only the current user turn and prior user turns. When analyzing cases where user-turn-only prompting substantially outperforms full context, we identify instances of context pollution, in which models over-condition on their previous responses, introducing errors, hallucinations, or stylistic artifacts that propagate across turns. Motivated by these findings, we design a context-filtering approach that selectively omits assistant-side context. Our findings suggest that selectively omitting assistant history can improve response quality while reducing memory consumption.

  • 5 authors
·
Feb 27

ATTUNER: Recomputation-Free KV Cache Reuse via Query-Side Adaptation

Large language model (LLM) agents repeatedly load reusable content, such as skills, documents, and memory entries, into the current context. Re-encoding this content for every request wastes computation. Position-independent caching (PIC) alleviates this by encoding each artifact independently and reusing its key-value (KV) states at arbitrary positions, but it incurs a quality loss relative to full-context prefill. Existing methods repair this loss by restoring global position IDs or recomputing selected tokens. In this work, we isolate the source of the loss, finding that the positional mismatch has minor effect, and independently cached artifacts retain faithful representations: reading a provided artifact stays largely accurate, and performance degrades only when the model must select among multiple artifacts. Moreover, replacing PIC's attention scores with full-prefill scores recovers performance with the cached KV unchanged, localizing the failure to the attention rather than KV recomputation. Motivated by this, we propose Attuner, a query-side adaptation method that learns to read a frozen artifact cache. Attuner inserts low-rank adapters into the query projections and is trained by distilling full-prefill distribution into the student. It trains fewer than 0.05\% of the model parameters and, at inference, requires neither cache recomputation nor a full-context reference. On Qwen3-4B and Qwen3-8B across seven benchmarks covering skills, documents, memory, and code, Attuner substantially outperforms prior PIC baselines in both in-domain and out-of-domain settings, matches full-context prefill quality while providing up to 3.73times speedup.

  • 11 authors
·
Sep 28

In-the-Flow Agentic System Optimization for Effective Planning and Tool Use

Outcome-driven reinforcement learning has advanced reasoning in large language models (LLMs), but prevailing tool-augmented approaches train a single, monolithic policy that interleaves thoughts and tool calls under full context; this scales poorly with long horizons and diverse tools and generalizes weakly to new scenarios. Agentic systems offer a promising alternative by decomposing work across specialized modules, yet most remain training-free or rely on offline training decoupled from the live dynamics of multi-turn interaction. We introduce AgentFlow, a trainable, in-the-flow agentic framework that coordinates four modules (planner, executor, verifier, generator) through an evolving memory and directly optimizes its planner inside the multi-turn loop. To train on-policy in live environments, we propose Flow-based Group Refined Policy Optimization (Flow-GRPO), which tackles long-horizon, sparse-reward credit assignment by converting multi-turn optimization into a sequence of tractable single-turn policy updates. It broadcasts a single, verifiable trajectory-level outcome to every turn to align local planner decisions with global success and stabilizes learning with group-normalized advantages. Across ten benchmarks, AgentFlow with a 7B-scale backbone outperforms top-performing baselines with average accuracy gains of 14.9% on search, 14.0% on agentic, 14.5% on mathematical, and 4.1% on scientific tasks, even surpassing larger proprietary models like GPT-4o. Further analyses confirm the benefits of in-the-flow optimization, showing improved planning, enhanced tool-calling reliability, and positive scaling with model size and reasoning turns.

Stanford Stanford AI
·
Oct 7, 2025 4

Memo: Training Memory-Efficient Embodied Agents with Reinforcement Learning

To enable embodied agents to operate effectively over extended timeframes, it is crucial to develop models that form and access memories to stay contextualized in their environment. In the current paradigm of training transformer-based policies for embodied sequential decision-making tasks, visual inputs often overwhelm the context limits of transformers, while humans can maintain and utilize a lifetime of experience compressed as memories. Significant compression is possible in principle, as much of the input is irrelevant and can be abstracted. However, existing approaches predominantly focus on either recurrent models with fixed-size memory or transformers with full-context reliance. In this work, we propose Memo, a transformer-based architecture and training recipe for reinforcement learning (RL) on memory-intensive, long-horizon tasks. Memo incorporates the creation and retrieval of memory by interleaving periodic summarization tokens with the inputs of a model during training. We demonstrate Memo's effectiveness on a gridworld meta-RL benchmark and a multi-object navigation task in photo-realistic indoor settings. Memo outperforms naive long-context transformer baselines while being more compute and storage efficient. Additionally, Memo generalizes better to longer contexts at inference time and remains robust in streaming settings, where historical context must be truncated to fit inference constraints. Our code is available at: https://github.com/gunshi/memo.

  • 5 authors
·
Oct 22, 2025

Supersede: Diagnosing and Training the Memory-Update Gap in LLM Agents

Large language model (LLM) agents operate over long, multi-session interactions in which facts change: a user moves, a price updates, a plan is revised. Acting correctly requires using the current value of a fact and discarding values that have been superseded. We isolate this ability on real conversational data and show that it is a distinct, unsolved failure. On the knowledge-update subset of LongMemEval, replacing an agent's full context with a bounded, self-maintained memory drops accuracy from 92% to 77% even on a frontier model (gpt-5.4), a gap that is statistically significant (paired McNemar p<0.005) and persists across model scale while full-context accuracy saturates near 92%. The bottleneck is therefore memory maintenance, not comprehension, and is not closed by a stronger model. We then ask whether this is merely an undersized memory, and find it is not: as the conversation grows 24x, accuracy falls further (from 68% to 28%), and granting the agent proportionally more memory yields no detectable recovery (28% to 28%, n=25). The failure scales with the length of the conversation, not the compression ratio. We release Supersede, an open reinforcement-learning environment (on the verifiers / prime-rl stack) that turns this measurement into a training signal: agents are rewarded for answering from the current value and penalized for stale ones. Finally, we close the loop and show the gap is trainable: GRPO fine-tuning a small open model (Qwen2.5-3B) on this environment nearly doubles its held-out supersession accuracy on real, unseen conversations (9.0% to 16.7%, a single run), along a monotonic checkpoint curve indicating the learned policy, not the harness, carries the gain. To our knowledge this is the first trainable environment whose reward targets temporal fact-currency, and the first evidence the supersession gap can be trained down, not only measured.

  • 1 authors
·
Jun 24

Native Sparse Attention: Hardware-Aligned and Natively Trainable Sparse Attention

Long-context modeling is crucial for next-generation language models, yet the high computational cost of standard attention mechanisms poses significant computational challenges. Sparse attention offers a promising direction for improving efficiency while maintaining model capabilities. We present NSA, a Natively trainable Sparse Attention mechanism that integrates algorithmic innovations with hardware-aligned optimizations to achieve efficient long-context modeling. NSA employs a dynamic hierarchical sparse strategy, combining coarse-grained token compression with fine-grained token selection to preserve both global context awareness and local precision. Our approach advances sparse attention design with two key innovations: (1) We achieve substantial speedups through arithmetic intensity-balanced algorithm design, with implementation optimizations for modern hardware. (2) We enable end-to-end training, reducing pretraining computation without sacrificing model performance. As shown in Figure 1, experiments show the model pretrained with NSA maintains or exceeds Full Attention models across general benchmarks, long-context tasks, and instruction-based reasoning. Meanwhile, NSA achieves substantial speedups over Full Attention on 64k-length sequences across decoding, forward propagation, and backward propagation, validating its efficiency throughout the model lifecycle.

deepseek-ai DeepSeek
·
Feb 16, 2025 10

Hindsight is 20/20: Building Agent Memory that Retains, Recalls, and Reflects

Agent memory has been touted as a dimension of growth for LLM-based applications, enabling agents that can accumulate experience, adapt across sessions, and move beyond single-shot question answering. The current generation of agent memory systems treats memory as an external layer that extracts salient snippets from conversations, stores them in vector or graph-based stores, and retrieves top-k items into the prompt of an otherwise stateless model. While these systems improve personalization and context carry-over, they still blur the line between evidence and inference, struggle to organize information over long horizons, and offer limited support for agents that must explain their reasoning. We present Hindsight, a memory architecture that treats agent memory as a structured, first-class substrate for reasoning by organizing it into four logical networks that distinguish world facts, agent experiences, synthesized entity summaries, and evolving beliefs. This framework supports three core operations -- retain, recall, and reflect -- that govern how information is added, accessed, and updated. Under this abstraction, a temporal, entity aware memory layer incrementally turns conversational streams into a structured, queryable memory bank, while a reflection layer reasons over this bank to produce answers and to update information in a traceable way. On key long-horizon conversational memory benchmarks like LongMemEval and LoCoMo, Hindsight with an open-source 20B model lifts overall accuracy from 39% to 83.6% over a full-context baseline with the same backbone and outperforms full context GPT-4o. Scaling the backbone further pushes Hindsight to 91.4% on LongMemEval and up to 89.61% on LoCoMo (vs. 75.78% for the strongest prior open system), consistently outperforming existing memory architectures on multi-session and open-domain questions.

  • 7 authors
·
Dec 14, 2025

Mem0: Building Production-Ready AI Agents with Scalable Long-Term Memory

Large Language Models (LLMs) have demonstrated remarkable prowess in generating contextually coherent responses, yet their fixed context windows pose fundamental challenges for maintaining consistency over prolonged multi-session dialogues. We introduce Mem0, a scalable memory-centric architecture that addresses this issue by dynamically extracting, consolidating, and retrieving salient information from ongoing conversations. Building on this foundation, we further propose an enhanced variant that leverages graph-based memory representations to capture complex relational structures among conversational elements. Through comprehensive evaluations on LOCOMO benchmark, we systematically compare our approaches against six baseline categories: (i) established memory-augmented systems, (ii) retrieval-augmented generation (RAG) with varying chunk sizes and k-values, (iii) a full-context approach that processes the entire conversation history, (iv) an open-source memory solution, (v) a proprietary model system, and (vi) a dedicated memory management platform. Empirical results show that our methods consistently outperform all existing memory systems across four question categories: single-hop, temporal, multi-hop, and open-domain. Notably, Mem0 achieves 26% relative improvements in the LLM-as-a-Judge metric over OpenAI, while Mem0 with graph memory achieves around 2% higher overall score than the base configuration. Beyond accuracy gains, we also markedly reduce computational overhead compared to full-context method. In particular, Mem0 attains a 91% lower p95 latency and saves more than 90% token cost, offering a compelling balance between advanced reasoning capabilities and practical deployment constraints. Our findings highlight critical role of structured, persistent memory mechanisms for long-term conversational coherence, paving the way for more reliable and efficient LLM-driven AI agents.

  • 5 authors
·
Apr 27, 2025 2

SWE-PRBench: Benchmarking AI Code Review Quality Against Pull Request Feedback

We introduce SWE-PRBench, a benchmark of 350 pull requests with human-annotated ground truth for evaluating AI code review quality. Evaluated against an LLM-as-judge framework validated at kappa=0.75, 8 frontier models detect only 15-31% of human-flagged issues on the diff-only configuration, demonstrating that AI code review remains far below human expert performance despite strong results on code generation benchmarks. Pull requests are drawn from active open-source repositories, filtered from 700 candidates using a Repository Quality Score, and evaluated under three frozen context configurations: diff only (config_A), diff with file content (config_B), and full context (config_C), enabling systematic ablation of context provision strategies. All 8 models degrade monotonically from config_A to config_C, even when context is provided via structured semantic layers including AST-extracted function context and import graph resolution. The dominant mechanism is a collapse of Type2_Contextual issue detection at config_B, consistent with attention dilution in long contexts: a structured 2,000-token diff-with-summary prompt outperforms a 2,500-token full-context prompt enriched with execution context, behaviour mapping, and test signatures across all 8 models. The top four models are statistically indistinguishable (mean score 0.147-0.153) while a clear tier gap separates them from the remaining four (mean score <= 0.113). Dataset, contexts, annotations, and evaluation harness are released publicly.

  • 1 authors
·
Mar 27

Fold-CP: A Context Parallelism Framework for Biomolecular Modeling

Understanding cellular machinery requires atomic-scale reconstruction of large biomolecular assemblies. However, predicting the structures of these systems has been constrained by hardware memory requirements of models like AlphaFold 3, imposing a practical ceiling of a few thousand residues that can be processed on a single GPU. Here we present NVIDIA BioNeMo Fold-CP, a context parallelism framework that overcomes this barrier by distributing the inference and training pipelines of co-folding models across multiple GPUs. We use the Boltz models as open source reference architectures and implement custom multidimensional primitives that efficiently parallelize both the dense triangular updates and the irregular, data-dependent pattern of window-batched local attention. Our approach achieves efficient memory scaling; for an N-token input distributed across P GPUs, per-device memory scales as O(N^2/P), enabling the structure prediction of assemblies exceeding 30,000 residues on 64 NVIDIA B300 GPUs. We demonstrate the scientific utility of this approach through successful developer use cases: Fold-CP enabled the scoring of over 90% of Comprehensive Resource of Mammalian protein complexes (CORUM) database, as well as folding of disease-relevant PI4KA lipid kinase complex bound to an intrinsically disordered region without cropping. By providing a scalable pathway for modeling massive systems with full global context, Fold-CP represents a significant step toward the realization of a virtual cell.

  • 38 authors
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Mar 15

SciFigQual-Bench: A Benchmark for Scientific Figure Quality Assessment with Full-Manuscript Context

Scientific images are the core elements of presenting experimental conclusions, elaborating system architecture, and supporting comparative arguments in scientific papers. However, existing image quality assessment (IQA) methods are predominantly designed for natural photographs or AI-generated content, which cannot be directly applied to scientific papers. The few existing studies on scholarly charts remain confined to visual-surface comparisons, failing to verify caption alignment, citation relevance, or visual misleadingness. To address this, we propose SciFigQual-Bench, a full-text contextual benchmark that evaluates scientific images across five dimensions (clarity, layout, caption fit, context relevance, and misleading risk). The data covers top computer-science conferences from 2020 to 2025; 6,308 images were independently scored by multiple domain experts in five dimensions and aggregated into gold-standard annotations. Unlike previous scientific figure benchmarks, our dataset binds each image to its caption, citing sentence, and manuscript context. To enable automated evaluation on this benchmark, we designed a staged cross-modal evaluation framework SFQ-Agent to achieve auditable and refined scoring through the collection and fusion of modal evidence. Multiple mainstream large models were evaluated on the test subset eval1200, and SFQ-Agent (F3) equipped with GPT-5.6-Sol achieved the lowest overall average absolute error (0.418) and the highest consistency rate (93.4%), consistently outperforming both direct evaluation and auxiliary (Sidecar) visual language model evaluation schemes.

  • 6 authors
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Jul 28

Core Context Aware Attention for Long Context Language Modeling

Transformer-based Large Language Models (LLMs) have exhibited remarkable success in various natural language processing tasks primarily attributed to self-attention mechanism, which requires a token to consider all preceding tokens as its context to compute the attention score. However, when the context length L becomes very large (e.g., 32K), more redundant context information will be included w.r.t. any tokens, making the self-attention suffer from two main limitations: 1) The computational and memory complexity scales quadratically w.r.t. L; 2) The presence of redundant context information may hamper the model to capture dependencies among crucial tokens, which may degrade the representation performance. In this paper, we propose a plug-and-play Core Context Aware (CCA) Attention for efficient long-range context modeling, which consists of two components: 1) Globality-pooling attention that divides input tokens into groups and then dynamically merges tokens within each group into one core token based on their significance; 2) Locality-preserved attention that incorporates neighboring tokens into the attention calculation. The two complementary attentions will then be fused to the final attention, maintaining comprehensive modeling ability as the full self-attention. In this way, the core context information w.r.t. a given token will be automatically focused and strengthened, while the context information in redundant groups will be diminished during the learning process. As a result, the computational and memory complexity will be significantly reduced. More importantly, the CCA-Attention can improve the long-context modeling ability by diminishing the redundant context information. Extensive experimental results demonstrate that our CCA-Attention significantly outperforms state-of-the-art models in terms of computational efficiency and long-context modeling ability.

  • 7 authors
·
Dec 16, 2024

Parallel Causal Associative Fields: Gated Sparse Memory for Long-Context Language Modeling

Transformers achieve strong language modeling performance by providing direct token-to-token communication paths, but causal self-attention scales quadratically with context length. Recurrent and state-space models reduce this cost, yet compress history into sequentially updated fixed-size states. This paper studies a third primitive: a parallel content-addressed memory over causal successor records. The proposed Parallel Causal Associative Field (PCAF) writes local records from a context window into hash buckets, retrieves a bounded candidate set for the current query, forms a sparse cache distribution over successor tokens, and mixes that cache with a parametric local language model through a learned gate. The resulting model maintains sparse long-context access while avoiding a single fixed recurrent state bottleneck. We evaluate PCAF under full autoregressive pretraining on WikiText-103 and PG-19 using a distributed Google Cloud TPU v4-32 pod. At 303M parameters and context length T = 2048, PCAF-semantic reaches 36.31 perplexity on WikiText-103 and 52.45 perplexity on PG-19, compared with 47.49 and 53.84 for a matched dense Transformer. PCAF-semantic simultaneously processes 0.61-0.62M tokens/s across the TPU pod, versus 0.43M tokens/s for dense and local attention baselines. Supporting 41M-parameter multi-seed sweeps and single-GPU component ablations show that the associative cache, retrieval capacity, and learned gate materially affect the speed-quality trade-off.

  • 1 authors
·
Jun 8

Dolphin: Long Context as a New Modality for Energy-Efficient On-Device Language Models

This paper presents Dolphin, a novel decoder-decoder architecture for energy-efficient processing of long contexts in language models. Our approach addresses the significant energy consumption and latency challenges inherent in on-device models. Dolphin employs a compact 0.5B parameter decoder to distill extensive contextual information into a memory embedding, substantially reducing the input length for the primary 7B parameter decoder model. Inspired by vision-language models, we repurpose the image embedding projector to encode long textual contexts, effectively treating extended context as a distinct modality. This innovative method enables processing of substantially longer contexts without the typical computational overhead associated with extended input sequences. Empirical evaluations demonstrate a 10-fold improvement in energy efficiency and a 5-fold reduction in latency compared to conventional full-length context processing methods without losing quality of the response. Our work contributes to the development of more sustainable and scalable language models for on-device applications, addressing the critical need for energy-efficient and responsive AI technologies in resource-constrained environments while maintaining the accuracy to understand long contexts. This research has implications for the broader field of natural language processing, particularly in the domain of efficient model design for resource-limited settings. By enabling more sophisticated AI capabilities on edge devices, Dolphin paves the way for advanced language processing in a wide range of applications where computational resources are at a premium. The Dolphin model is publicly available at https://huggingface.co/NexaAIDev/Dolphin.

  • 4 authors
·
Aug 28, 2024 4

MCP Security Bench (MSB): Benchmarking Attacks Against Model Context Protocol in LLM Agents

The Model Context Protocol (MCP) standardizes how large language model (LLM) agents discover, describe, and call external tools. While MCP unlocks broad interoperability, it also enlarges the attack surface by making tools first-class, composable objects with natural-language metadata, and standardized I/O. We present MSB (MCP Security Benchmark), the first end-to-end evaluation suite that systematically measures how well LLM agents resist MCP-specific attacks throughout the full tool-use pipeline: task planning, tool invocation, and response handling. MSB contributes: (1) a taxonomy of 12 attacks including name-collision, preference manipulation, prompt injections embedded in tool descriptions, out-of-scope parameter requests, user-impersonating responses, false-error escalation, tool-transfer, retrieval injection, and mixed attacks; (2) an evaluation harness that executes attacks by running real tools (both benign and malicious) via MCP rather than simulation; and (3) a robustness metric that quantifies the trade-off between security and performance: Net Resilient Performance (NRP). We evaluate nine popular LLM agents across 10 domains and 405 tools, producing 2,000 attack instances. Results reveal the effectiveness of attacks against each stage of MCP. Models with stronger performance are more vulnerable to attacks due to their outstanding tool calling and instruction following capabilities. MSB provides a practical baseline for researchers and practitioners to study, compare, and harden MCP agents. Code: https://github.com/dongsenzhang/MSB

  • 6 authors
·
Oct 14, 2025

Medal S: Spatio-Textual Prompt Model for Medical Segmentation

We introduce Medal S, a medical segmentation foundation model that supports native-resolution spatial and textual prompts within an end-to-end trainable framework. Unlike text-only methods lacking spatial awareness, Medal S achieves channel-wise alignment between volumetric prompts and text embeddings, mitigating inaccuracies from resolution mismatches. By preserving full 3D context, it efficiently processes multiple native-resolution masks in parallel, enhancing multi-class segmentation performance. A lightweight 3D convolutional module enables precise voxel-space refinement guided by both prompt types, supporting up to 243 classes across CT, MRI, PET, ultrasound, and microscopy modalities in the BiomedSegFM dataset. Medal S offers two prompting modes: a text-only mode, where model predictions serve as spatial prompts for self-refinement without human input, and a hybrid mode, incorporating manual annotations for enhanced flexibility. For 24-class segmentation, parallel spatial prompting reduces inference time by more than 90% compared to sequential prompting. We propose dynamic resampling to address target-patch ratio imbalance, extending SAT and nnU-Net for data augmentation. Furthermore, we develop optimized text preprocessing, a two-stage inference strategy, and post-processing techniques to improve memory efficiency, precision, and inference speed. On the five-modality average on the validation set, Medal S outperforms SAT with a DSC of 75.44 (vs. 69.83), NSD of 77.34 (vs. 71.06), F1 of 38.24 (vs. 24.88), and DSC TP of 65.46 (vs. 46.97). Medal S achieves excellent performance by harmonizing spatial precision with semantic textual guidance, demonstrating superior efficiency and accuracy in multi-class medical segmentation tasks compared to sequential prompt-based approaches. Medal S will be publicly available at https://github.com/yinghemedical/Medal-S.

  • 6 authors
·
Nov 17, 2025 2

TFMAdapter: Lightweight Instance-Level Adaptation of Foundation Models for Forecasting with Covariates

Time Series Foundation Models (TSFMs) have recently achieved state-of-the-art performance in univariate forecasting on new time series simply by conditioned on a brief history of past values. Their success demonstrates that large-scale pretraining across diverse domains can acquire the inductive bias to generalize from temporal patterns in a brief history. However, most TSFMs are unable to leverage covariates -- future-available exogenous variables critical for accurate forecasting in many applications -- due to their domain-specific nature and the lack of associated inductive bias. We propose TFMAdapter, a lightweight, instance-level adapter that augments TSFMs with covariate information without fine-tuning. Instead of retraining, TFMAdapter operates on the limited history provided during a single model call, learning a non-parametric cascade that combines covariates with univariate TSFM forecasts. However, such learning would require univariate forecasts at all steps in the history, requiring too many calls to the TSFM. To enable training on the full historical context while limiting TSFM invocations, TFMAdapter uses a two-stage method: (1) generating pseudo-forecasts with a simple regression model, and (2) training a Gaussian Process regressor to refine predictions using both pseudo- and TSFM forecasts alongside covariates. Extensive experiments on real-world datasets demonstrate that TFMAdapter consistently outperforms both foundation models and supervised baselines, achieving a 24-27\% improvement over base foundation models with minimal data and computational overhead. Our results highlight the potential of lightweight adapters to bridge the gap between generic foundation models and domain-specific forecasting needs.

  • 2 authors
·
Sep 17, 2025

GLIMPSE: Do Large Vision-Language Models Truly Think With Videos or Just Glimpse at Them?

Existing video benchmarks often resemble image-based benchmarks, with question types like "What actions does the person perform throughout the video?" or "What color is the woman's dress in the video?" For these, models can often answer by scanning just a few key frames, without deep temporal reasoning. This limits our ability to assess whether large vision-language models (LVLMs) can truly think with videos rather than perform superficial frame-level analysis. To address this, we introduce GLIMPSE, a benchmark specifically designed to evaluate whether LVLMs can genuinely think with videos. Unlike prior benchmarks, GLIMPSE emphasizes comprehensive video understanding beyond static image cues. It consists of 3,269 videos and over 4,342 highly visual-centric questions across 11 categories, including Trajectory Analysis, Temporal Reasoning, and Forensics Detection. All questions are carefully crafted by human annotators and require watching the entire video and reasoning over full video context-this is what we mean by thinking with video. These questions cannot be answered by scanning selected frames or relying on text alone. In human evaluations, GLIMPSE achieves 94.82% accuracy, but current LVLMs face significant challenges. Even the best-performing model, GPT-o3, reaches only 66.43%, highlighting that LVLMs still struggle to move beyond surface-level reasoning to truly think with videos.

  • 13 authors
·
Jul 13, 2025

MultiVerse: A Multi-Turn Conversation Benchmark for Evaluating Large Vision and Language Models

Vision-and-Language Models (VLMs) have shown impressive capabilities on single-turn benchmarks, yet real-world applications often demand more intricate multi-turn dialogues. Existing multi-turn datasets (e.g, MMDU, ConvBench) only partially capture the breadth and depth of conversational scenarios encountered by users. In this work, we introduce MultiVerse, a novel multi-turn conversation benchmark featuring 647 dialogues - each averaging four turns - derived from a diverse set of 12 popular VLM evaluation benchmarks. With 484 tasks and 484 interaction goals, MultiVerse covers a wide range of topics, from factual knowledge and perception to advanced reasoning tasks such as mathematics and coding. To facilitate robust assessment, we propose a checklist-based evaluation method that leverages GPT-4o as the automated evaluator, measuring performance across 37 key aspects, including perceptual accuracy, linguistic clarity, and factual correctness. We evaluate 18 VLMs on MultiVerse, revealing that even the strongest models (e.g., GPT-4o) achieve only a 50% success rate in complex multi-turn conversations, highlighting the dataset's challenging nature. Notably, we find that providing full dialogue context significantly enhances performance for smaller or weaker models, emphasizing the importance of in-context learning. We believe MultiVerse is a landscape of evaluating multi-turn interaction abilities for VLMs.

KAIST KAIST
·
Oct 18, 2025 2

HyenaDNA: Long-Range Genomic Sequence Modeling at Single Nucleotide Resolution

Genomic (DNA) sequences encode an enormous amount of information for gene regulation and protein synthesis. Similar to natural language models, researchers have proposed foundation models in genomics to learn generalizable features from unlabeled genome data that can then be fine-tuned for downstream tasks such as identifying regulatory elements. Due to the quadratic scaling of attention, previous Transformer-based genomic models have used 512 to 4k tokens as context (<0.001% of the human genome), significantly limiting the modeling of long-range interactions in DNA. In addition, these methods rely on tokenizers to aggregate meaningful DNA units, losing single nucleotide resolution where subtle genetic variations can completely alter protein function via single nucleotide polymorphisms (SNPs). Recently, Hyena, a large language model based on implicit convolutions was shown to match attention in quality while allowing longer context lengths and lower time complexity. Leveraging Hyenas new long-range capabilities, we present HyenaDNA, a genomic foundation model pretrained on the human reference genome with context lengths of up to 1 million tokens at the single nucleotide-level, an up to 500x increase over previous dense attention-based models. HyenaDNA scales sub-quadratically in sequence length (training up to 160x faster than Transformer), uses single nucleotide tokens, and has full global context at each layer. We explore what longer context enables - including the first use of in-context learning in genomics for simple adaptation to novel tasks without updating pretrained model weights. On fine-tuned benchmarks from the Nucleotide Transformer, HyenaDNA reaches state-of-the-art (SotA) on 12 of 17 datasets using a model with orders of magnitude less parameters and pretraining data. On the GenomicBenchmarks, HyenaDNA surpasses SotA on all 8 datasets on average by +9 accuracy points.

  • 13 authors
·
Jun 27, 2023 2

Open-Vocabulary Camouflaged Object Segmentation with Cascaded Vision Language Models

Open-Vocabulary Camouflaged Object Segmentation (OVCOS) seeks to segment and classify camouflaged objects from arbitrary categories, presenting unique challenges due to visual ambiguity and unseen categories.Recent approaches typically adopt a two-stage paradigm: first segmenting objects, then classifying the segmented regions using Vision Language Models (VLMs).However, these methods (1) suffer from a domain gap caused by the mismatch between VLMs' full-image training and cropped-region inference, and (2) depend on generic segmentation models optimized for well-delineated objects, making them less effective for camouflaged objects.Without explicit guidance, generic segmentation models often overlook subtle boundaries, leading to imprecise segmentation.In this paper,we introduce a novel VLM-guided cascaded framework to address these issues in OVCOS.For segmentation, we leverage the Segment Anything Model (SAM), guided by the VLM.Our framework uses VLM-derived features as explicit prompts to SAM, effectively directing attention to camouflaged regions and significantly improving localization accuracy.For classification, we avoid the domain gap introduced by hard cropping.Instead, we treat the segmentation output as a soft spatial prior via the alpha channel, which retains the full image context while providing precise spatial guidance, leading to more accurate and context-aware classification of camouflaged objects.The same VLM is shared across both segmentation and classification to ensure efficiency and semantic consistency.Extensive experiments on both OVCOS and conventional camouflaged object segmentation benchmarks demonstrate the clear superiority of our method, highlighting the effectiveness of leveraging rich VLM semantics for both segmentation and classification of camouflaged objects.

  • 7 authors
·
Jun 24, 2025

Gated KalmaNet: A Fading Memory Layer Through Test-Time Ridge Regression

As efficient alternatives to softmax Attention, linear State-Space Models (SSMs) achieve constant memory and linear compute, but maintain only a lossy, fading summary of the past, often leading to inferior performance in recall-oriented tasks. We propose Gated KalmaNet (GKA), a layer that accounts for the full past while maintaining SSM-style efficiency. We ground our approach in the Kalman Filter (KF) framework, which provides a principled solution for optimal inference in dynamical systems. We show that several existing SSM layers (DeltaNet, Gated DeltaNet, and Kimi Delta Attention) are approximations to the KF recurrence that assume identity error covariance, thereby ignoring how past measurements (keys and values) should optimally influence state updates. In contrast, GKA computes the exact Kalman gain by maintaining the full error covariance. Under a steady-state assumption that enables parallelization, this reduces to solving an online ridge regression problem with constant memory and linear compute cost. A critical insight is that standard KF equations are numerically unstable in low-precision environments (like bfloat16) and hard to parallelize on modern hardware. We address this through: (1) adaptive regularization with input-dependent gating to control the condition number of the ridge regression for numerical stability, and (2) Chebyshev Iteration, which we show is more stable than conventional iterative solvers in low-precision settings. We further develop hardware-aware chunk-wise kernels to enable efficient training. Empirically, GKA outperforms existing SSM layers (like Mamba2 and Gated DeltaNet) on short-context tasks and achieves more than 10\% relative improvement on long-context RAG and LongQA tasks up to 128k tokens.

  • 6 authors
·
Nov 25, 2025

Where to Look Matters: On-Policy Self-Distillation for Long-Video Understanding

Vision-language models (VLMs) have made substantial progress in long-video understanding, with standard backbone models typically answering questions from frames sampled across the full video. However, as videos become longer, the full-video context inevitably contains more question-irrelevant temporal content, which can distract the model from the evidence needed to answer a specific question. We empirically find that focusing the visual input on short annotated clue intervals containing question-relevant evidence consistently improves prediction accuracy across model scales compared with using the corresponding full videos, while requiring fewer input frames. Based on this finding, we introduce Clue-OPSD, a clue-privileged on-policy self-distillation framework for long-video understanding. During training, a full-video student learns from a self-teacher conditioned on the corresponding clue interval by aligning their next-token distributions along student-generated trajectories. Clue-OPSD thus uses clue intervals as privileged supervision without relying on ground-truth answer labels, while requiring no clue annotations or additional modules at inference time. Extensive experiments across multiple long-video understanding benchmarks and Qwen3.5 model scales demonstrate consistent improvements over the corresponding backbone models and strong performance against supervised post-training baselines.

  • 7 authors
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Aug 25

Sliding Windows Are Not the End: Exploring Full Ranking with Long-Context Large Language Models

Large Language Models (LLMs) have shown exciting performance in listwise passage ranking. Due to the limited input length, existing methods often adopt the sliding window strategy. Such a strategy, though effective, is inefficient as it involves repetitive and serialized processing, which usually re-evaluates relevant passages multiple times. As a result, it incurs redundant API costs, which are proportional to the number of inference tokens. The development of long-context LLMs enables the full ranking of all passages within a single inference, avoiding redundant API costs. In this paper, we conduct a comprehensive study of long-context LLMs for ranking tasks in terms of efficiency and effectiveness. Surprisingly, our experiments reveal that full ranking with long-context LLMs can deliver superior performance in the supervised fine-tuning setting with a huge efficiency improvement. Furthermore, we identify two limitations of fine-tuning the full ranking model based on existing methods: (1) sliding window strategy fails to produce a full ranking list as a training label, and (2) the language modeling loss cannot emphasize top-ranked passage IDs in the label. To alleviate these issues, we propose a new complete listwise label construction approach and a novel importance-aware learning objective for full ranking. Experiments show the superior performance of our method over baselines. Our codes are available at https://github.com/8421BCD/fullrank.

  • 7 authors
·
Dec 19, 2024

RIBOSPAN: A Long-Context RNA Foundation Model for Versatile RNA Modeling

Full-length RNAs, particularly messenger RNAs, often exceed the context lengths used to pretrain existing RNA foundation models, limiting complete-transcript modeling at single-nucleotide resolution. We present RIBOSPAN, a 1.61-billion-parameter bidirectional RNA foundation model natively pretrained with context lengths up to 10,240 nt. RIBOSPAN combines dense bidirectional self-attention, single-nucleotide tokenization, and attention-isolated sequence packing to enable high-resolution modeling of complete long RNAs. We evaluate the model through nucleotide reconstruction, a controlled long-context representation benchmark, and frozen RNA-type representation analysis. Native 10K pretraining preserves strong reconstruction at 10,240 tokens, while continued pretraining with 40% masking improves recovery under heavy corruption while preserving representation quality. The long-context benchmark further shows that native 10K models maintain strong contextual responsiveness and context-specific representation separation while keeping perturbation-induced representation changes highly localized. Inference-time YaRN scaling recovers much of the contextual organization lost by direct extrapolation of short-context models, but induces substantially greater distal representation diffusion. Frozen-representation evaluations further demonstrate state-of-the-art RNA representation quality, with RIBOSPAN achieving the strongest overall performance across diverse RNA types and retaining a clear advantage on long RNAs. Building on the same backbone, we develop a multidimensionally conditioned discrete-diffusion framework for full-length mRNA generation and redesign, including synonymous-codon diffusion for protein-preserving CDS optimization. Together, RIBOSPAN establishes a powerful long-context foundation for transferable RNA representation learning and full-transcript mRNA design.

SII-GAIR-NLP SII-GAIR
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Aug 23 2

Block Parallelism For Efficient Distributed Long-Context Diffusion Language Model Training

Block diffusion language models (BDLMs) combine autoregressive dependencies across blocks with parallel denoising within blocks, but long-context training is constrained by distributed attention communication and activation memory. Conventional context parallelism (CP) shards the combined clean-plus-corrupted sequence by position, communicating shared clean K/V together with block-specific corrupted K/V and their gradients. We observe that the BDLM objective separates over target blocks. We introduce block parallelism (BP), a new distributed parallelism dimension that assigns each corrupted-block computation to one rank. To scale BP to long contexts, we introduce context-sharded block parallelism (CSBP), which also shards the shared clean sequence across those ranks. CSBP keeps corrupted K/V and gradients local, avoids replicated clean prefixes, and preserves BDLM training semantics. On 16 H200 GPUs at 256K context, CSBP improves throughput over the best baseline by 1.18-1.45x for supervised fine-tuning and 1.27-1.33x for conversion of autoregressive models to BDLMs, while matching or reducing peak HBM. Full-model speedup reaches 1.61x at 512K. On eight H100 GPUs, CSBP accelerates DFlash2 speculative-decoder training by 2.48x at 512K and 7.59x at 1M. In matched 12-hour DiffusionGemma 26B-A4B SFT runs, CSBP achieves higher pass rates at every trained checkpoint on SWE-bench Verified and Terminal-Bench Lite. Code: https://github.com/ScalingIntelligence/Turbo-dLLM

  • 7 authors
·
Sep 15

MergeDNA: Context-aware Genome Modeling with Dynamic Tokenization through Token Merging

Modeling genomic sequences faces two unsolved challenges: the information density varies widely across different regions, while there is no clearly defined minimum vocabulary unit. Relying on either four primitive bases or independently designed DNA tokenizers, existing approaches with naive masked language modeling pre-training often fail to adapt to the varying complexities of genomic sequences. Leveraging Token Merging techniques, this paper introduces a hierarchical architecture that jointly optimizes a dynamic genomic tokenizer and latent Transformers with context-aware pre-training tasks. As for network structures, the tokenization module automatically chunks adjacent bases into words by stacking multiple layers of the differentiable token merging blocks with local-window constraints, then a Latent Encoder captures the global context of these merged words by full-attention blocks. Symmetrically employing a Latent Decoder and a Local Decoder, MergeDNA learns with two pre-training tasks: Merged Token Reconstruction simultaneously trains the dynamic tokenization module and adaptively filters important tokens, while Adaptive Masked Token Modeling learns to predict these filtered tokens to capture informative contents. Extensive experiments show that MergeDNA achieves superior performance on three popular DNA benchmarks and several multi-omics tasks with fine-tuning or zero-shot evaluation, outperforming typical tokenization methods and large-scale DNA foundation models.

Westlake-University Westlake University
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Nov 17, 2025 2

Thus Spake Long-Context Large Language Model

Long context is an important topic in Natural Language Processing (NLP), running through the development of NLP architectures, and offers immense opportunities for Large Language Models (LLMs) giving LLMs the lifelong learning potential akin to humans. Unfortunately, the pursuit of a long context is accompanied by numerous obstacles. Nevertheless, long context remains a core competitive advantage for LLMs. In the past two years, the context length of LLMs has achieved a breakthrough extension to millions of tokens. Moreover, the research on long-context LLMs has expanded from length extrapolation to a comprehensive focus on architecture, infrastructure, training, and evaluation technologies. Inspired by the symphonic poem, Thus Spake Zarathustra, we draw an analogy between the journey of extending the context of LLM and the attempts of humans to transcend its mortality. In this survey, We will illustrate how LLM struggles between the tremendous need for a longer context and its equal need to accept the fact that it is ultimately finite. To achieve this, we give a global picture of the lifecycle of long-context LLMs from four perspectives: architecture, infrastructure, training, and evaluation, showcasing the full spectrum of long-context technologies. At the end of this survey, we will present 10 unanswered questions currently faced by long-context LLMs. We hope this survey can serve as a systematic introduction to the research on long-context LLMs.

  • 13 authors
·
Feb 24, 2025 6

SinkLoRA: Enhanced Efficiency and Chat Capabilities for Long-Context Large Language Models

Extending the functionality of the Transformer model to accommodate longer sequence lengths has become a critical challenge. This extension is crucial not only for improving tasks such as language translation and long-context processing but also for enabling novel applications like chatbots, code generation, and multimedia content creation. The primary obstacle is the self-attention mechanism, which scales quadratically with sequence length in terms of computation time and memory requirements. LongLoRA proposed shifted sparse attention (S\(^2\)-Attn), effectively enabling context extension and leading to non-trivial computation savings with similar performance to fine-tuning with vanilla attention. However, LongLoRA is still not as efficient as vanilla attention, reaching only 39\% of the perplexity improvement compared to full attention. This inefficiency is due to the cyclic shift applied within different attention head patterns, causing either chaos in the attention head structure or unnecessary information exchange between token groups. To address these issues, We propose SinkLoRA, which features better work partitioning. Specifically, (1) we developed SF-Attn with a segmentation and reassembly algorithm to proportionally return cyclically shifted groups of attention heads to their un-shifted state together with global attention of "sink attention tokens", achieving 92\% of the perplexity improvement compared to full attention after fine tuning, and (2) applied a SOTA KV cache compression algorithm H_2O to accelerate inference. Furthermore, We conducted supervised fine-tuning with SinkLoRA using a self collected LongAlpaca-plus dataset. All our code, models, datasets, and demos are available at https://github.com/Dexter-GT-86/SinkLoRA.

  • 1 authors
·
Jun 9, 2024 2