logos/docs/README.md

LOGOS System Documentation Index

Logarithmic Ordering Generation Operating Software Intelligence through structural mathematics, not statistical probability.

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Quick Start

# Launch the LOGOS System
python -m logos.logos_suite

# Run MTL Interpreter
python -c "from logos.mtl.interpreter import MTLInterpreter; i = MTLInterpreter(); print(i.execute('(mult [2] [3])'))"

# Test Dissolution Engine
python -m logos.agents.dissolution_engine

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Documentation Map

Core Philosophy

Document	Description	Prime
Purpose Statement	The "Why" of LOGOS - 5 Imperatives	[11] WHY
Architecture Overview	System components and flow	[2] MECHANISM
Definitions Alignment	Glossary of LOGOS terms	[19] TEXT

Technical Reference

Document	Description	Prime
MTL Specification	Meta Tensor Language syntax	[2] MECHANISM
Technical Architecture	Implementation details	[2] MECHANISM
Developer Guidelines	Contribution standards	[3] RESULT

Theoretical Foundation

Document	Description	Prime
Epistemology Audit	Information theory alignment	[11] WHY
Periodic Table	Element definitions	[5] CHOICE

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Module Reference

Core (logos/)

Module	Description	Entry Point
logos_suite.py	Main Entry Point	python -m logos.logos_suite
server.py	Flask API Server	Port 5000
config.py	Configuration management
agent_dispatcher.py	Neural Router & Swarm

MTL (logos/mtl/)

Module	Description	Key Classes
interpreter.py	MTL Interpreter	MTLInterpreter
genesis.json	Root Manifold Axioms	Primes 1-29

Memory (logos/memory/)

Module	Description	Key Classes
prime_db.py	Prime Token Database	PrimeTokenDB

Agents (logos/agents/)

Module	Description	Protocol
dissolution_engine.py	Type detection & routing	Protocol 38
video_atomizer.py	YouTube processing	Protocol 25
web_atomizer.py	Web content ingestion	Protocol 32
dolphin.py	Systems oversight	Protocol 20
base_agent.py	Agent base class

Network (logos/network/)

Module	Description
topology.py	Matroska topology
dissolution.py	Data dissolution
physics.py	Wave mechanics
storage.py	Persistence layer

Tools (logos/tools/)

Script	Purpose
validate_mtl.py	MTL test suite
test_fusion.py	Inter-domain fusion
test_logic_gates.py	OR/AND/NOT gates
test_synapse.py	Knowledge graph
test_persistence.py	Delta heat & storage
test_not_gate.py	Structural steering

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Genesis Block Reference

Prime Axioms (Irreducibles)

[1]  TIME       - The Canvas (Identity Element)
[2]  MECHANISM  - The Verb (Operator)
[3]  RESULT     - The Noun (Operand)
[5]  CHOICE     - The Fork (Branch)
[7]  PERSIST    - The Memory (Storage)
[11] WHY        - The Reason (Query)
[13] RELATE     - The Connection (Link)
[17] IMAGE      - Visual Data
[19] TEXT       - Linguistic Data
[23] AUDIO      - Acoustic Data
[29] SIGNAL     - Raw Data

Composite Domains (Derived)

[6]  = 2×3      FLIP        Action (Mechanism × Result)
[10] = 2×5      AROUND      Navigation (Mechanism × Choice)
[12] = 2²×3     THOUGHT     Result of Previous
[14] = 2×7      HOLD        Save Command (Mechanism × Persist)
[42] = 2×3×7    DEEP_STORAGE Permanent Record
[323]= 17×19    VISUAL_TEXT  PDF/Document
[782]= 2×17×23  VIDEO        Image + Audio + Mechanism

Processing Domains

[1300] RELATIONSHIP  Synaptic links (×100 scaling)
[1700] VISUAL_CORTEX Image processing
[1900] TEXT_ENGINE   Language processing
[2300] AUDIO_CORTEX  Audio processing

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Cross-Reference Pointers

How Components Connect

┌─────────────────────────────────────────────────────────────┐
│                    LOGOS SYSTEM FLOW                        │
├─────────────────────────────────────────────────────────────┤
│                                                             │
│  INPUT ──► DISSOLUTION ──► DOMAIN ROUTING ──► PROCESSING   │
│    │           │               │                  │         │
│    ▼           ▼               ▼                  ▼         │
│  Raw Data   GCD/Factor    Prime Domain      Agent Flow     │
│             Detection     Assignment         (AF)          │
│                │               │                  │         │
│                ▼               ▼                  ▼         │
│         [logos/agents/   [logos/mtl/      [logos/agents/   │
│          dissolution_    interpreter.py]   video_atomizer, │
│          engine.py]                        web_atomizer]   │
│                                                             │
│  ─────────────────────────────────────────────────────────  │
│                                                             │
│  PERSISTENCE ◄── SYNAPSE ◄── STORAGE ◄── OUTPUT            │
│       │            │           │            │               │
│       ▼            ▼           ▼            ▼               │
│    [42]         [13]×A×B     [7]×X       Response          │
│  Deep Storage  Relate Link  Persist     to User           │
│                    │           │                            │
│                    ▼           ▼                            │
│            [logos/memory/prime_db.py]                      │
│                                                             │
└─────────────────────────────────────────────────────────────┘

File → Concept Mapping

Concept	Primary File	Related Docs
Dissolution	agents/dissolution_engine.py	Architecture Overview
MTL Syntax	mtl/interpreter.py	MTL Specification
Prime Memory	memory/prime_db.py	Epistemology Audit
Knowledge Graph	mtl/interpreter.py (relate)	Purpose Statement
Domain Routing	agent_dispatcher.py	Technical Architecture

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API Quick Reference

MTL Commands (via logos_suite.py)

mtl (mult [2] [3])           # → 6 (Mechanism × Result)
mtl (or [2] [3])             # → 6 (LCM - Superposition)
mtl (and [6] [10])           # → 2 (GCD - Intersection)
mtl (relate [17] [19])       # → 4199 (Image-Text synapse)
mtl (fractran [[5 2]] 8)     # → 5 (Fractran loop)

Server Endpoints (Port 5000)

GET  /v1                     # Health check
POST /v1/chat/completions    # Chat with LOGOS
GET  /v1/context/buffer      # View context
POST /v1/context/buffer      # Update context

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Last Updated: 2026-01-11 See Purpose Statement for the full architectural manifesto.