README.md

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# Genomics Aotearoa

**Maximising Aotearoa New Zealand’s potential through genomics**

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## Quick links

- 🌐 Website: [genomics-aotearoa.org.nz](https://www.genomics-aotearoa.org.nz/)
- 🗃️ Aotearoa Genomic Data Repository (AGDR): [data.agdr.org.nz](https://data.agdr.org.nz/)
- 🧑‍🎓 Training (Genomics Aotearoa/NeSI): [Training programme](https://www.genomics-aotearoa.org.nz/training/genomics-aotearoa/nesi-training-programme)
- 📚 Publications: [Latest publications](https://www.genomics-aotearoa.org.nz/news-events/latest-publications)
- 🧰 Code & workshops: [genomicsaotearoa.github.io](https://genomicsaotearoa.github.io/)
- 📬 Contact: [genomics.aotearoa@otago.ac.nz](mailto:genomics.aotearoa@otago.ac.nz) (or see [Contact us](https://www.genomics-aotearoa.org.nz/contact-us))
- 𝕏 Updates: [@GenomicsNZ](https://x.com/GenomicsNZ)
- ▶️ Seminars/videos: [Genomics Aotearoa on YouTube](https://www.youtube.com/c/GenomicsAotearoa/videos)

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## About Genomics Aotearoa

Genomics Aotearoa is Aotearoa New Zealand’s collaborative platform for genomics and bioinformatics—supporting nationally significant research and building capability so that genomics can translate into real-world outcomes.

Our work programme spans three genomics research themes—**Health**, **Primary Production**, and **Environment**—supported by technical infrastructure in **Bioinformatics** and cultural infrastructure grounded in **Te Ao Māori** and **Vision Mātauranga**.

Genomics Aotearoa is hosted by **Te Whare Wānanga o Ōtākou | University of Otago** and funded as a national infrastructure platform through New Zealand’s Strategic Science Investment Fund (SSIF).

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## Data governance and responsible use

Genomics data can be sensitive—culturally, ethically, and legally. We ask all users to engage with our resources in ways that uphold responsible practice in Aotearoa New Zealand.

**Please:**
- Follow the principles and guidance in **[Guidelines for Māori genomic research](https://www.genomics-aotearoa.org.nz/resources/guidelines-maori-genomics-research)** (including *Te Nohonga Kaitiaki*, *Te Mata Ira*, *He Tangata Kei Tua*, and *Te Ara Tika*).
- For **taonga species** genomic data, use the **[Aotearoa Genomic Data Repository (AGDR)](https://data.agdr.org.nz/)** for storage/sharing and managed access pathways.
- Respect **consent, privacy, and governance** for any human or community-linked data. Do not attempt re-identification of individuals.
- If you’re unsure whether a dataset/model is appropriate to use or redistribute, **contact us**: [genomics.aotearoa@otago.ac.nz](mailto:genomics.aotearoa@otago.ac.nz)

Kia ora for supporting responsible genomics and bioinformatics in Aotearoa.