HistoMethyl / README.md
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metadata
license: other
library_name: pytorch
tags:
  - computational-pathology
  - whole-slide-imaging
  - dna-methylation
  - histopathology

HistoMethyl

This repository hosts released HistoMethyl checkpoints.

Files:

  • histomethyl_gigapath.ckpt: HistoMethyl checkpoint using the Prov-GigaPath image backbone.
  • histomethyl_gigapath_hparams.yaml: model hyperparameters for the GigaPath checkpoint.
  • histomethyl_feather.ckpt: HistoMethyl checkpoint using the FEATHER image backbone.
  • histomethyl_feather_hparams.yaml: model hyperparameters for the FEATHER checkpoint.

The code for loading checkpoints and running downstream evaluation is available at: https://github.com/wangd12rpi/histomethyl

The checkpoints are intended for research use. Users are responsible for complying with the licenses and access requirements of upstream backbone models and dependencies.