Release 0.1.0

330fe8b verified 6 days ago

858 Bytes

tags:
  - porefm
  - pytorch
  - nanopore
  - rna
  - pretrained

PoreFM-RNA

Pretrained PoreFM model for Oxford Nanopore RNA signals.

Model version: 0.1.0. Chemistry: RNA004. Embedding dimension: 512.

File	Contents
`backbone.pt`	Backbone for embeddings and downstream tasks.
`pretraining.pt`	Backbone, pretraining objective heads, and EMA target encoder; optimizer and scheduler states are excluded.

Model configuration and preprocessing are embedded in the checkpoints. Setup and usage are documented in the PoreFM code repository.

manifest.json records artifact identities and tensor fingerprints. SHA256SUMS verifies checkpoint downloads. Tensor fingerprints are independent of descriptive metadata; file hashes identify exact bytes. Documentation-only changes leave the model version unchanged.