| --- |
| tags: |
| - porefm |
| - pytorch |
| - nanopore |
| - rna |
| - pretrained |
| --- |
| |
| # PoreFM-RNA |
|
|
| Pretrained PoreFM model for Oxford Nanopore RNA signals. |
|
|
| Model version: **0.1.0**. Chemistry: **RNA004**. Embedding dimension: **512**. |
|
|
| | File | Contents | |
| |---|---| |
| | `backbone.pt` | Backbone for embeddings and downstream tasks. | |
| | `pretraining.pt` | Backbone, pretraining objective heads, and EMA target encoder; optimizer and scheduler states are excluded. | |
|
|
| Model configuration and preprocessing are embedded in the checkpoints. Setup and usage are documented in the PoreFM code repository. |
|
|
| `manifest.json` records artifact identities and tensor fingerprints. `SHA256SUMS` verifies checkpoint downloads. Tensor fingerprints are independent of descriptive metadata; file hashes identify exact bytes. Documentation-only changes leave the model version unchanged. |
|
|
