Dataset stringlengths 13 214 | Experiment stringlengths 14 76 | Dataset DOI / URL stringlengths 32 128 | Grouping stringclasses 3
values | 2D images int64 0 5.2k | 3D acquisitions int64 0 358 | Training tiles int64 0 17.6k |
|---|---|---|---|---|---|---|
Zebrafish lateral-line neuromast SBEM - WT8 | Zebrafish Lateral-Line Neuromast SBF-SEM | https://webknossos.org/datasets/Neuromast_WT8-5b3ce7bb1d0000340240b91f/view | Public | 0 | 1 | 302 |
Zebrafish Spinal Circuit SBF-SEM Volume | Zebrafish Spinal Escape Circuit SBF-SEM | https://webknossos.org/datasets/zebrafish_vertebra_250um-6064317a010000740060d95a/view | Public | 0 | 1 | 448 |
BHK-21 HCV core lipid droplets | BHK-21 Cell HCV Core Protein Steatosis TEM | https://doi.org/10.6019/S-BIAD3712 | Outreach | 10 | 0 | 10 |
Liver - ADH-neg Control | Deer Mouse Alcohol-Induced Liver & Pancreas Injury TEM | https://doi.org/10.6019/S-BIAD3723 | Outreach | 2 | 0 | 2 |
Liver - ADH-neg Ethanol-fed | Deer Mouse Alcohol-Induced Liver & Pancreas Injury TEM | https://doi.org/10.6019/S-BIAD3723 | Outreach | 8 | 0 | 7 |
Liver - ADH-pos Control | Deer Mouse Alcohol-Induced Liver & Pancreas Injury TEM | https://doi.org/10.6019/S-BIAD3723 | Outreach | 2 | 0 | 2 |
Liver - ADH-pos Ethanol-fed | Deer Mouse Alcohol-Induced Liver & Pancreas Injury TEM | https://doi.org/10.6019/S-BIAD3723 | Outreach | 7 | 0 | 7 |
Pancreas - ADH-neg Control | Deer Mouse Alcohol-Induced Liver & Pancreas Injury TEM | https://doi.org/10.6019/S-BIAD3723 | Outreach | 3 | 0 | 12 |
Pancreas - ADH-neg Ethanol-fed | Deer Mouse Alcohol-Induced Liver & Pancreas Injury TEM | https://doi.org/10.6019/S-BIAD3723 | Outreach | 7 | 0 | 16 |
Pancreas - ADH-pos Control | Deer Mouse Alcohol-Induced Liver & Pancreas Injury TEM | https://doi.org/10.6019/S-BIAD3723 | Outreach | 2 | 0 | 5 |
Pancreas - ADH-pos Ethanol-fed | Deer Mouse Alcohol-Induced Liver & Pancreas Injury TEM | https://doi.org/10.6019/S-BIAD3723 | Outreach | 8 | 0 | 8 |
GRX Cell Line | GRX Murine Hepatic Stellate Cell Line TEM | https://doi.org/10.6019/S-BIAD3727 | Outreach | 50 | 0 | 47 |
GRX Cell Line - Viral Particles | GRX Murine Hepatic Stellate Cell Line TEM | https://doi.org/10.6019/S-BIAD3727 | Outreach | 14 | 0 | 14 |
Opisthorchis-infected, high-fat/high-fructose diet | Hamster Liver Opisthorchis Infection NAFLD TEM | https://doi.org/10.6019/S-BIAD3711 | Outreach | 11 | 0 | 11 |
Opisthorchis-infected, normal chow | Hamster Liver Opisthorchis Infection NAFLD TEM | https://doi.org/10.6019/S-BIAD3711 | Outreach | 11 | 0 | 11 |
Uninfected control, high-fat/high-fructose diet | Hamster Liver Opisthorchis Infection NAFLD TEM | https://doi.org/10.6019/S-BIAD3711 | Outreach | 12 | 0 | 11 |
Uninfected control, normal chow | Hamster Liver Opisthorchis Infection NAFLD TEM | https://doi.org/10.6019/S-BIAD3711 | Outreach | 11 | 0 | 11 |
Postmortem COVID-19 ultrastructure | Human COVID-19 Postmortem Multi-Organ TEM | https://doi.org/10.6019/S-BIAD3706 | Outreach | 4 | 0 | 4 |
Postmortem COVID-19 renal ultrastructure | Human Kidney COVID-19 Postmortem TEM | https://doi.org/10.6019/S-BIAD3706 | Outreach | 6 | 0 | 6 |
Postmortem COVID-19 kidney ultrastructure | Human Kidney COVID-19 Postmortem TEM (2) | https://doi.org/10.6019/S-BIAD3706 | Outreach | 2 | 0 | 2 |
Renal biopsy TEM - light chain deposition disease | Human Kidney Light Chain Deposition Disease TEM | https://doi.org/10.6019/S-BIAD3717 | Outreach | 6 | 0 | 5 |
Lipedema adipose tissue capillaries - TEM | Human Lipedema Adipose Capillary TEM | https://doi.org/10.6019/S-BIAD3710 | Outreach | 8 | 0 | 8 |
Giant mitochondria in NAFLD liver - array tomography volumes (4 patients) | Human Liver Giant Mitochondria NAFLD SEM | https://doi.org/10.6019/S-BIAD3713 | Outreach | 0 | 4 | 867 |
Human HCV liver steatosis | Human Liver Hepatitis C Steatosis TEM | https://doi.org/10.6019/S-BIAD3712 | Outreach | 102 | 0 | 94 |
Postmortem COVID-19 lung and liver ultrastructure | Human Lung & Liver COVID-19 Postmortem TEM | https://doi.org/10.6019/S-BIAD3706 | Outreach | 4 | 0 | 4 |
Renal Biopsy TEM - Membranous Glomerulonephritis | Human Membranous Glomerulonephritis Kidney TEM | https://doi.org/10.6019/S-BIAD3717 | Outreach | 6 | 0 | 6 |
Multi-organ postmortem COVID-19 TEM | Human Multi-Organ COVID-19 Postmortem TEM | https://doi.org/10.6019/S-BIAD3706 | Outreach | 6 | 0 | 6 |
Brown Adipose Tissue EM — Thermogenesis & Peridroplet Mitochondria (Winn 2019, Acin-Perez 2021) | Islet and Adipose EM | https://doi.org/10.6019/S-BIAD3699 | Outreach | 87 | 0 | 85 |
Islet EM — Weight Cycling & Insulin Secretion (Winn 2022) | Islet and Adipose EM | https://doi.org/10.6019/S-BIAD3700 | Outreach | 5 | 0 | 525 |
Malacosporean ultrastructure (figure panels) | Malacosporean Myxozoan Fish Kidney TEM | https://doi.org/10.6019/S-BIAD3704 | Outreach | 20 | 0 | 148 |
Adipose organ transdifferentiation - TEM (2009) | Mouse Adipose Organ Transdifferentiation TEM | https://doi.org/10.6019/S-BIAD3710 | Outreach | 1 | 0 | 1 |
Adipose organ transdifferentiation triangle - TEM (2025) | Mouse Adipose Organ Transdifferentiation TEM | https://doi.org/10.6019/S-BIAD3710 | Outreach | 3 | 0 | 3 |
Adipose-to-mammary transdifferentiation TEM | Mouse Adipose-to-Mammary Transdifferentiation TEM | https://doi.org/10.6019/S-BIAD3710 | Outreach | 1 | 0 | 1 |
MuTk2_112 - POLG-mutator, TWNK overexpressor | Mouse Heart mtDNA Replication TEM | https://doi.org/10.6019/S-BIAD3725 | Outreach | 5 | 0 | 10 |
MuTk2_113 - POLG-mutator, TWNK overexpressor | Mouse Heart mtDNA Replication TEM | https://doi.org/10.6019/S-BIAD3725 | Outreach | 10 | 0 | 20 |
MuTk2_116 - Wild-type | Mouse Heart mtDNA Replication TEM | https://doi.org/10.6019/S-BIAD3725 | Outreach | 10 | 0 | 18 |
MuTk2_132 - POLG-mutator, TWNK wild-type | Mouse Heart mtDNA Replication TEM | https://doi.org/10.6019/S-BIAD3725 | Outreach | 7 | 0 | 14 |
Mouse hepatocyte nucleolus YB-1 / RNA polymerase I immunogold TEM | Mouse Hepatocyte YB-1 Immunogold TEM | https://doi.org/10.6019/S-BIAD3701 | Outreach | 1 | 0 | 1 |
CDX1 knockout - 857-cdx1ko | Mouse Intestine Cdx Knockout TEM | https://doi.org/10.6019/S-BIAD3707 | Outreach | 34 | 0 | 63 |
CDX1/CDX2 double knockout - 855-dblko | Mouse Intestine Cdx Knockout TEM | https://doi.org/10.6019/S-BIAD3707 | Outreach | 43 | 0 | 80 |
CDX1/CDX2 double knockout - F18-DBLKO | Mouse Intestine Cdx Knockout TEM | https://doi.org/10.6019/S-BIAD3707 | Outreach | 30 | 0 | 58 |
CDX2 knockout - 207 | Mouse Intestine Cdx Knockout TEM | https://doi.org/10.6019/S-BIAD3707 | Outreach | 21 | 0 | 42 |
CDX2 knockout - 213 | Mouse Intestine Cdx Knockout TEM | https://doi.org/10.6019/S-BIAD3707 | Outreach | 15 | 0 | 30 |
CDX2 knockout - 537_547 | Mouse Intestine Cdx Knockout TEM | https://doi.org/10.6019/S-BIAD3707 | Outreach | 30 | 0 | 56 |
Control - 537_547 | Mouse Intestine Cdx Knockout TEM | https://doi.org/10.6019/S-BIAD3707 | Outreach | 21 | 0 | 42 |
Alport model - 16 weeks | Mouse Kidney Aging and Alport Disease Matrix TEM | https://doi.org/10.6019/S-BIAD3708 | Outreach | 37 | 0 | 72 |
Alport model - 8 weeks | Mouse Kidney Aging and Alport Disease Matrix TEM | https://doi.org/10.6019/S-BIAD3708 | Outreach | 36 | 0 | 64 |
Control - 16 weeks | Mouse Kidney Aging and Alport Disease Matrix TEM | https://doi.org/10.6019/S-BIAD3708 | Outreach | 49 | 0 | 94 |
Control - 8 weeks | Mouse Kidney Aging and Alport Disease Matrix TEM | https://doi.org/10.6019/S-BIAD3708 | Outreach | 34 | 0 | 64 |
M1 - 12 months, mutant, 4-PBA | Mouse Kidney Alport Syndrome 4-PBA TEM | https://doi.org/10.6019/S-BIAD3714 | Outreach | 7 | 0 | 7 |
M10 - 12 months, mutant, PBS (vehicle) | Mouse Kidney Alport Syndrome 4-PBA TEM | https://doi.org/10.6019/S-BIAD3714 | Outreach | 6 | 0 | 4 |
M11 - 12 months, mutant, PBS (vehicle) | Mouse Kidney Alport Syndrome 4-PBA TEM | https://doi.org/10.6019/S-BIAD3714 | Outreach | 6 | 0 | 6 |
M12 - 12 months, mutant, PBS (vehicle) | Mouse Kidney Alport Syndrome 4-PBA TEM | https://doi.org/10.6019/S-BIAD3714 | Outreach | 5 | 0 | 5 |
M2 - 12 months, mutant, 4-PBA | Mouse Kidney Alport Syndrome 4-PBA TEM | https://doi.org/10.6019/S-BIAD3714 | Outreach | 10 | 0 | 10 |
M21 - 6 months, mutant, PBS (vehicle) | Mouse Kidney Alport Syndrome 4-PBA TEM | https://doi.org/10.6019/S-BIAD3714 | Outreach | 3 | 0 | 3 |
M22 - 6 months, mutant, PBS (vehicle) | Mouse Kidney Alport Syndrome 4-PBA TEM | https://doi.org/10.6019/S-BIAD3714 | Outreach | 4 | 0 | 4 |
M24 - 6 months, mutant, PBS (vehicle) | Mouse Kidney Alport Syndrome 4-PBA TEM | https://doi.org/10.6019/S-BIAD3714 | Outreach | 5 | 0 | 5 |
M3 - 12 months, mutant, 4-PBA | Mouse Kidney Alport Syndrome 4-PBA TEM | https://doi.org/10.6019/S-BIAD3714 | Outreach | 7 | 0 | 7 |
M6 - 12 months, WT, 4-PBA | Mouse Kidney Alport Syndrome 4-PBA TEM | https://doi.org/10.6019/S-BIAD3714 | Outreach | 6 | 0 | 6 |
M7 - 12 months, WT, 4-PBA | Mouse Kidney Alport Syndrome 4-PBA TEM | https://doi.org/10.6019/S-BIAD3714 | Outreach | 5 | 0 | 5 |
Mouse 1 - 6 months, mutant, 4-PBA | Mouse Kidney Alport Syndrome 4-PBA TEM | https://doi.org/10.6019/S-BIAD3714 | Outreach | 12 | 0 | 12 |
Mouse 13 - 6 months, mutant, 4-PBA | Mouse Kidney Alport Syndrome 4-PBA TEM | https://doi.org/10.6019/S-BIAD3714 | Outreach | 5 | 0 | 5 |
Mouse 14 - 6 months, mutant, 4-PBA | Mouse Kidney Alport Syndrome 4-PBA TEM | https://doi.org/10.6019/S-BIAD3714 | Outreach | 6 | 0 | 6 |
Mouse 17 - 6 months, mutant, 4-PBA | Mouse Kidney Alport Syndrome 4-PBA TEM | https://doi.org/10.6019/S-BIAD3714 | Outreach | 12 | 0 | 12 |
Mouse 2 - 6 months, mutant, 4-PBA | Mouse Kidney Alport Syndrome 4-PBA TEM | https://doi.org/10.6019/S-BIAD3714 | Outreach | 10 | 0 | 9 |
Mouse 3 - 6 months, mutant, 4-PBA | Mouse Kidney Alport Syndrome 4-PBA TEM | https://doi.org/10.6019/S-BIAD3714 | Outreach | 12 | 0 | 11 |
Mouse 4 - 6 months, mutant, 4-PBA | Mouse Kidney Alport Syndrome 4-PBA TEM | https://doi.org/10.6019/S-BIAD3714 | Outreach | 7 | 0 | 6 |
Mouse 5 - 6 months, mutant, PBS (vehicle) | Mouse Kidney Alport Syndrome 4-PBA TEM | https://doi.org/10.6019/S-BIAD3714 | Outreach | 12 | 0 | 12 |
Mouse 6 - 6 months, mutant, PBS (vehicle) | Mouse Kidney Alport Syndrome 4-PBA TEM | https://doi.org/10.6019/S-BIAD3714 | Outreach | 4 | 0 | 4 |
Mouse 7 - 6 months, mutant, PBS (vehicle) | Mouse Kidney Alport Syndrome 4-PBA TEM | https://doi.org/10.6019/S-BIAD3714 | Outreach | 8 | 0 | 8 |
Mouse 8 - 6 months, WT, Untreated | Mouse Kidney Alport Syndrome 4-PBA TEM | https://doi.org/10.6019/S-BIAD3714 | Outreach | 4 | 0 | 4 |
Mouse 9 - 6 months, WT, Untreated | Mouse Kidney Alport Syndrome 4-PBA TEM | https://doi.org/10.6019/S-BIAD3714 | Outreach | 1 | 0 | 1 |
Mouse 592 - IRE1α KO doxorubicin | Mouse Kidney Podocyte IRE1α Knockout TEM | https://doi.org/10.6019/S-BIAD3703 | Outreach | 19 | 0 | 68 |
Mouse 607 - Control untreated | Mouse Kidney Podocyte IRE1α Knockout TEM | https://doi.org/10.6019/S-BIAD3703 | Outreach | 16 | 0 | 64 |
Mouse 614 - Control doxorubicin | Mouse Kidney Podocyte IRE1α Knockout TEM | https://doi.org/10.6019/S-BIAD3703 | Outreach | 23 | 0 | 82 |
Mouse 623 - IRE1α KO untreated | Mouse Kidney Podocyte IRE1α Knockout TEM | https://doi.org/10.6019/S-BIAD3703 | Outreach | 14 | 0 | 55 |
Mouse 624 - IRE1α KO doxorubicin | Mouse Kidney Podocyte IRE1α Knockout TEM | https://doi.org/10.6019/S-BIAD3703 | Outreach | 26 | 0 | 100 |
Mouse 629 - Control untreated | Mouse Kidney Podocyte IRE1α Knockout TEM | https://doi.org/10.6019/S-BIAD3703 | Outreach | 13 | 0 | 48 |
Mouse 630 - Control doxorubicin | Mouse Kidney Podocyte IRE1α Knockout TEM | https://doi.org/10.6019/S-BIAD3703 | Outreach | 17 | 0 | 66 |
Mouse 636 - IRE1α KO untreated | Mouse Kidney Podocyte IRE1α Knockout TEM | https://doi.org/10.6019/S-BIAD3703 | Outreach | 19 | 0 | 72 |
Mouse 647 - IRE1α KO untreated | Mouse Kidney Podocyte IRE1α Knockout TEM | https://doi.org/10.6019/S-BIAD3703 | Outreach | 15 | 0 | 56 |
Mouse 648 - IRE1α KO doxorubicin | Mouse Kidney Podocyte IRE1α Knockout TEM | https://doi.org/10.6019/S-BIAD3703 | Outreach | 16 | 0 | 64 |
Mouse 650 - Control untreated | Mouse Kidney Podocyte IRE1α Knockout TEM | https://doi.org/10.6019/S-BIAD3703 | Outreach | 14 | 0 | 48 |
Mouse 651 - Control doxorubicin | Mouse Kidney Podocyte IRE1α Knockout TEM | https://doi.org/10.6019/S-BIAD3703 | Outreach | 16 | 0 | 64 |
Mouse 198 - Nox5pod+ transgenic, untreated | Mouse Kidney Podocyte NOX5 TEM | https://doi.org/10.6019/S-BIAD3720 | Outreach | 9 | 0 | 9 |
Mouse 207 - Nox5pod+ transgenic, untreated | Mouse Kidney Podocyte NOX5 TEM | https://doi.org/10.6019/S-BIAD3720 | Outreach | 8 | 0 | 8 |
Mouse 229 - Nox5pod+ transgenic, untreated | Mouse Kidney Podocyte NOX5 TEM | https://doi.org/10.6019/S-BIAD3720 | Outreach | 9 | 0 | 9 |
Mouse 238 - Nox5pod+ transgenic, STZ diabetic | Mouse Kidney Podocyte NOX5 TEM | https://doi.org/10.6019/S-BIAD3720 | Outreach | 8 | 0 | 8 |
Mouse 244 - Wild-type, STZ diabetic | Mouse Kidney Podocyte NOX5 TEM | https://doi.org/10.6019/S-BIAD3720 | Outreach | 11 | 0 | 11 |
Mouse 247 - Wild-type, STZ diabetic | Mouse Kidney Podocyte NOX5 TEM | https://doi.org/10.6019/S-BIAD3720 | Outreach | 13 | 0 | 11 |
Mouse 255 - Wild-type, untreated | Mouse Kidney Podocyte NOX5 TEM | https://doi.org/10.6019/S-BIAD3720 | Outreach | 8 | 0 | 7 |
Mouse 256 - Wild-type, untreated | Mouse Kidney Podocyte NOX5 TEM | https://doi.org/10.6019/S-BIAD3720 | Outreach | 7 | 0 | 7 |
Mouse 766 - Nox5pod+ transgenic, STZ diabetic | Mouse Kidney Podocyte NOX5 TEM | https://doi.org/10.6019/S-BIAD3720 | Outreach | 8 | 0 | 7 |
Mouse 833 - Wild-type, STZ diabetic | Mouse Kidney Podocyte NOX5 TEM | https://doi.org/10.6019/S-BIAD3720 | Outreach | 12 | 0 | 12 |
Mouse 834 - Nox5pod+ transgenic, STZ diabetic | Mouse Kidney Podocyte NOX5 TEM | https://doi.org/10.6019/S-BIAD3720 | Outreach | 15 | 0 | 13 |
Scramble control | Mouse MIN6 Beta Cell miR-146a-5p Inflammation TEM | https://doi.org/10.6019/S-BIAD3719 | Outreach | 8 | 0 | 32 |
Scramble control - cytokine-treated | Mouse MIN6 Beta Cell miR-146a-5p Inflammation TEM | https://doi.org/10.6019/S-BIAD3719 | Outreach | 8 | 0 | 32 |
miR-146a-5p inhibitor | Mouse MIN6 Beta Cell miR-146a-5p Inflammation TEM | https://doi.org/10.6019/S-BIAD3719 | Outreach | 11 | 0 | 44 |
miR-146a-5p inhibitor - cytokine-treated | Mouse MIN6 Beta Cell miR-146a-5p Inflammation TEM | https://doi.org/10.6019/S-BIAD3719 | Outreach | 10 | 0 | 36 |
miR-146a-5p overexpression | Mouse MIN6 Beta Cell miR-146a-5p Inflammation TEM | https://doi.org/10.6019/S-BIAD3719 | Outreach | 13 | 0 | 52 |
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