task
stringclasses
5 values
input
stringlengths
89
339
functional_group
### Instruction: Does the molecule contain a amine group? COc1cccc2c1OC[C@H](Cc1cc(NC3CC3)nc(N)[nH+]1)C2 ### Response: Yes
ring_counting
### Instruction: Count the five-membered rings in the following molecule. CC[C@H]1N[C@]2(C(=O)N(Cc3ccccc3)c3ccccc32)[C@@H]2C(=O)N(Cc3ccccc3)C(=O)[C@H]21 ### Response: 3
functional_group
### Instruction: Does the molecule contain a amide group? CCN1CCc2nc3ccccc3c(C(=O)N[C@H]3CCc4ccccc43)c2C1 ### Response: Yes
canonicalization
### Instruction: Canonicalize the following SMILES string. Cc1cccc(c1)NC(/C=C/c1cc(F)cc2COCOc21)=O ### Response: Cc1cccc(NC(=O)/C=C/c2cc(F)cc3c2OCOC3)c1
canonicalization
### Instruction: Canonicalize the following SMILES string. c1c(c2c(C[NH+]3CCCC3)c(ccc2o1)O)C(=O)c1ccc(cc1)OC ### Response: COc1ccc(C(=O)c2coc3ccc(O)c(C[NH+]4CCCC4)c23)cc1
canonicalization
### Instruction: Canonicalize the following SMILES string. C(c1nc([C@H]2CCCN(S(=O)(=O)Cc3ccccc3)C2)ccc1)c1ccc(cc1)F ### Response: O=S(=O)(Cc1ccccc1)N1CCC[C@H](c2cccc(Cc3ccc(F)cc3)n2)C1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CC(=O)N1CCC(C(=O)NCC[C@H](C)c2ccccc2)CC1 ### Response: 4
canonicalization
### Instruction: Canonicalize the following SMILES string. O[C@H]1C[NH+](C[C@H]1O)Cc1oc(cc1)-c1cccc(Br)c1 ### Response: O[C@@H]1C[NH+](Cc2ccc(-c3cccc(Br)c3)o2)C[C@@H]1O
functional_group
### Instruction: Does the molecule contain a aldehyde group? O=C(CSC1CCCC1)Nc1cccc2ncccc12 ### Response: No
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? O=C(Nc1cnc(-c2ccccc2)s1)N1CCO[C@H](c2ccccc2)C1 ### Response: 1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [5*]NCC[8*] Fragment 2: [15*]C1CCCC1 ### Response: C[C@@H]1CCN(C(=O)NCCC2CCCC2)C[C@@H]1O
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? C[C@@H]([NH2+]C/C=C/c1ccccc1)c1ccccc1 ### Response: 3
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CC(C)(NCc1nc(-c2ccco2)no1)c1nccs1 ### Response: 3
functional_group
### Instruction: Does the molecule contain a sulfonyl group? C[C@H](NC(=O)C[C@H]1CCS(=O)(=O)C1)c1ccc(-n2cccn2)cc1 ### Response: Yes
functional_group
### Instruction: Does the molecule contain a aromatic_ring group? CS(=O)(=O)[C@H]1CCC[C@@H](NC(=O)N2CCC[C@@H]2c2cccc(F)c2)C1 ### Response: Yes
ring_counting
### Instruction: Count the six-membered rings in the following molecule. CCc1cccc2c(/C=N/n3c(C)nnc3C)c[nH]c12 ### Response: 1
canonicalization
### Instruction: Canonicalize the following SMILES string. C([C@@H]1OC(=O)CC1)(N[C@@H](C)c1ccc(CC)cc1)=O ### Response: CCc1ccc([C@H](C)NC(=O)[C@H]2CCC(=O)O2)cc1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [5*][NH2+][C@H]1CCCC[C@H]1[S@](=O)CC Fragment 2: [4*]Cc1c(C)cc(C)cc1C ### Response: CC[S@@](=O)[C@@H]1CCCC[C@@H]1[NH2+]Cc1c(C)cc(C)cc1C
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [1*]C(=O)CN([5*])[5*] Fragment 2: [5*]NC(C)(C)C ### Response: CC(C)N(CC(=O)NC(=O)NC(C)(C)C)Cc1ccc([N+](=O)[O-])cc1
ring_counting
### Instruction: Count the five-membered rings in the following molecule. COc1ccc([C@H](C[NH3+])N2C[C@H]3CCC[NH+]3C[C@@H]2C)cc1 ### Response: 1
ring_counting
### Instruction: Count the six-membered rings in the following molecule. CC[S@@](=O)[C@H]1CCCC[C@@H]1NC(=O)c1ccc(NC(=O)C2CC2)cc1 ### Response: 2
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? COc1ccc2c(c1)CCC[C@H]2CC(=O)N[C@@H]1CCC[C@@H](C)C1 ### Response: 2
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CC[C@H](C)n1nccc1NC(=O)Cn1cnc2c(cnn2C)c1=O ### Response: 4
functional_group
### Instruction: Does the molecule contain a aromatic_ring group? O=C1/C(=C/c2cccc(Cl)c2)COc2cc3c(cc21)OCO3 ### Response: Yes
canonicalization
### Instruction: Canonicalize the following SMILES string. c1c(F)cc(cc1[C@H](O)c1cc(F)cnc1)Br ### Response: O[C@H](c1cncc(F)c1)c1cc(F)cc(Br)c1
ring_counting
### Instruction: Count the six-membered rings in the following molecule. O=C(CSc1nc(-c2cccs2)n[nH]1)Nc1ccccc1Oc1ccccc1 ### Response: 2
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? Cc1[nH+]n(C)c(N(C)C)c1CN[C@@H]1CCCOc2ccc(F)cc21 ### Response: 1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? O=C(/C=C/c1cccs1)c1ccc(NC(=O)c2ccco2)cc1 ### Response: 3
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [14*]c1cccs1 Fragment 2: [8*]CC(C)C ### Response: CC(C)CN1C(=O)c2ccccc2[C@H](C(=O)NC(C)C)[C@H]1c1cccs1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [8*]C(F)(F)F Fragment 2: [6*]C(=O)NNc1cccc([16*])c1 ### Response: Cc1ccc(C(=O)NNc2cccc(C(F)(F)F)c2)cc1F
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? O=C(Oc1ccc2nccnc2c1)c1sccc1Br ### Response: 1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? O=C([C@@H]1N=CO[C@H]1C1CC1)N(CCc1c[nH]c2ccccc12)Cc1cccnc1 ### Response: 2
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [8*]Cc1ccccc1 Fragment 2: [16*]c1ccccc1 ### Response: O=C1/C(=C/c2ccc(Cl)cc2Cl)SC(=S)N1Cc1ccccc1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [9*]n1/c(=N/C(=O)CS(=O)(=O)c2ccc(C)cc2)sc2cc(C)c(C)cc21 Fragment 2: [8*]CCOC ### Response: COCCn1/c(=N/C(=O)CS(=O)(=O)c2ccc(C)cc2)sc2cc(C)c(C)cc21
canonicalization
### Instruction: Canonicalize the following SMILES string. c1cc2c(cccc2cc1)CC(=O)N[C@@H](CCC)C ### Response: CCC[C@@H](C)NC(=O)Cc1cccc2ccccc12
functional_group
### Instruction: Does the molecule contain a ether group? COc1ccc([C@H](NC(=O)c2ccc3nc(C)sc3c2)c2ccncc2)cc1 ### Response: Yes
ring_counting
### Instruction: Count the five-membered rings in the following molecule. Cn1cccc(NC(=O)C(=O)N[C@H]2C[C@@H]2C2CCCCC2)c1=O ### Response: 0
ring_counting
### Instruction: Count the five-membered rings in the following molecule. CCCC[C@H](CC)C(=O)N1CCS[C@@H]1c1cccs1 ### Response: 2
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [1*]C(=O)C([7*])C#N Fragment 2: [5*]NC(C)C ### Response: Cc1ccc(/C=C(/C#N)C(=O)NC(C)C)cc1
canonicalization
### Instruction: Canonicalize the following SMILES string. N1(CC[NH+](CC1)[C@H](COC)C)CC(N[C@H]1CCCC[C@H]1C)=O ### Response: COC[C@H](C)[NH+]1CCN(CC(=O)N[C@H]2CCCC[C@H]2C)CC1
canonicalization
### Instruction: Canonicalize the following SMILES string. [C@@H]1(N2CCN(Cc3cc(C)no3)CC2)C(=O)N(CCC1)Cc1ccccc1 ### Response: Cc1cc(CN2CCN([C@H]3CCCN(Cc4ccccc4)C3=O)CC2)on1
canonicalization
### Instruction: Canonicalize the following SMILES string. C([C@@H]1[C@H](NC(N[C@H](c2ccc(cc2)-c2cncnc2)C)=O)CCC1)O ### Response: C[C@H](NC(=O)N[C@@H]1CCC[C@@H]1CO)c1ccc(-c2cncnc2)cc1
functional_group
### Instruction: Does the molecule contain a amide group? C[C@H]1S/C(=N\c2ccc(F)cc2)NC1=O ### Response: Yes
ring_counting
### Instruction: Count the five-membered rings in the following molecule. C[C@H]1CN(CC[C@@H]2CSCC[NH2+]2)CC(C)(C)O1 ### Response: 0
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [1*]C(=O)[C@H]1CCCN1[5*] Fragment 2: [16*]c1cc(C)oc1C ### Response: Cc1cc([C@@](C)(O)CNC(=O)[C@H]2CCCN2C(=O)C2CCCC2)c(C)o1
functional_group
### Instruction: Does the molecule contain a aromatic_ring group? Fc1ccc([C@@H](Cl)Cc2nc3ccccc3o2)c(F)c1F ### Response: Yes
ring_counting
### Instruction: Count the five-membered rings in the following molecule. Cn1cc(CCC(=O)Nc2cc(-c3ccncc3)n[nH]2)cn1 ### Response: 2
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CN1C(=O)c2ccc(S(=O)(=O)NCc3ccccc3)cc2C1=O ### Response: 1
canonicalization
### Instruction: Canonicalize the following SMILES string. C1C[C@H](CC)[C@@H](CC1)[NH2+]Cc1ccc(cc1)[N+]([O-])=O ### Response: CC[C@H]1CCCC[C@H]1[NH2+]Cc1ccc([N+](=O)[O-])cc1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? C[C@H](Cc1ccc([N+](=O)[O-])cc1)C(=O)[O-] ### Response: 3
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [8*]C(F)(F)F Fragment 2: [16*]c1ccn2ccnc2c1F ### Response: Fc1c(C(F)(F)F)ccn2ccnc12
ring_counting
### Instruction: Count the five-membered rings in the following molecule. C=CCNC(=O)COc1ccc(CO)cc1Cl ### Response: 0
canonicalization
### Instruction: Canonicalize the following SMILES string. C[C@@H](CN/C(=[NH+]/C)NCc1ccsc1)[NH+]1CCc2ccccc2C1 ### Response: C/[NH+]=C(\NCc1ccsc1)NC[C@H](C)[NH+]1CCc2ccccc2C1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? O=C(NC[C@@H]1CCCO1)N[C@H](c1ccccc1)c1ccc(F)cc1 ### Response: 1
ring_counting
### Instruction: Count the five-membered rings in the following molecule. CCN(CC(=O)OC)C(=O)C1[C@H]2CCCC[C@@H]12 ### Response: 0
canonicalization
### Instruction: Canonicalize the following SMILES string. c1(cccc(OC(C2CC=CC2)=O)c1)C(N(C)C)=O ### Response: CN(C)C(=O)c1cccc(OC(=O)C2CC=CC2)c1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? COc1ccc2c(c1)C=C(C(=O)Nc1cccc(NC(=O)C(C)C)c1)CO2 ### Response: 3
functional_group
### Instruction: Does the molecule contain a nitro group? O=C(NCCc1ccccn1)NC1CCN(C(=O)c2ccoc2)CC1 ### Response: No
functional_group
### Instruction: Does the molecule contain a ester group? C[C@H](Oc1ccc(F)c(F)c1)C(=O)OCCc1cccnc1 ### Response: Yes
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [4*]CCSC Fragment 2: [5*]NCc1ccc(C2=NN=C(N[5*])SC2)s1 ### Response: CSCCNC1=NN=C(c2ccc(CNC(C)=O)s2)CS1
ring_counting
### Instruction: Count the six-membered rings in the following molecule. O=C(c1cn(-c2ccccc2)nn1)N1CCCCCC1 ### Response: 1
functional_group
### Instruction: Does the molecule contain a amide group? NC(=O)N1CCC[C@H](C(=O)N2CCC(C(=O)[O-])CC2)C1 ### Response: Yes
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [5*]N[C@H](CO)C(C)C Fragment 2: [3*]OC1CCCC1 ### Response: CC(C)[C@@H](CO)NC(=O)C(=O)Nc1ccc(OC2CCCC2)cc1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CCCNC(=S)NC(=O)c1cc(OC)cc(OC)c1 ### Response: 3
ring_counting
### Instruction: Count the five-membered rings in the following molecule. Cn1c(-c2ccccn2)nn(CCNC(=O)c2cccc(Cl)c2)c1=O ### Response: 1
ring_counting
### Instruction: Count the six-membered rings in the following molecule. O=C(C[C@H]1C=CCC1)N1CCC[C@@H]1c1ccc(O)cc1 ### Response: 1
canonicalization
### Instruction: Canonicalize the following SMILES string. [NH+](CC)(C[C@@H]1CN(C(=O)[C@H](c2ccc3c(cccc3)c2)C)CC1)CC ### Response: CC[NH+](CC)C[C@H]1CCN(C(=O)[C@@H](C)c2ccc3ccccc3c2)C1
functional_group
### Instruction: Does the molecule contain a aromatic_ring group? O=C(CCc1nc2ccccc2c(=O)[nH]1)Nc1cc(Cl)c(Cl)cc1Cl ### Response: Yes
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? COc1cc(CNC(=O)C2[C@H]3CCCC[C@@H]23)cc(OC)c1O ### Response: 1
ring_counting
### Instruction: Count the six-membered rings in the following molecule. Cc1nc(-n2nc(-c3ccco3)cc2NC(=O)CCCBr)[nH]c(=O)c1C ### Response: 1
functional_group
### Instruction: Does the molecule contain a amine group? CC(C)[C@H](NC(=O)c1ccc(F)cc1)C(=O)NNC(=O)c1ccncc1 ### Response: No
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? C[NH2+][C@@H](C)c1cc(F)ccc1OCc1ccc(Br)cc1F ### Response: 2
functional_group
### Instruction: Does the molecule contain a nitrile group? COC(=O)/C(C#N)=C\Nc1cccc(O)c1 ### Response: Yes
canonicalization
### Instruction: Canonicalize the following SMILES string. C1CC([C@@H]([NH2+][C@H](C)c2nnn(c2)-c2ccccc2)C)C1 ### Response: C[C@H]([NH2+][C@H](C)c1cn(-c2ccccc2)nn1)C1CCC1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? Cc1nc(N2CCc3nnc(C(C)C)n3CC2)c2sccc2n1 ### Response: 3
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [1*]C(=O)[C@H](C)SC Fragment 2: [1*]C(=O)C1CCN([5*])CC1 ### Response: CS[C@@H](C)C(=O)N1CCC(C(=O)NCc2ccc(F)cc2)CC1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [5*]NS(=O)(=O)c1cccnc1 Fragment 2: [12*]S(=O)(=O)c1cccnc1 ### Response: COc1cccc(N2C[C@@H](NS(=O)(=O)c3cccnc3)CC2=O)c1
functional_group
### Instruction: Does the molecule contain a phenol group? COC(=O)C(C)(C)C[NH+]1CC[C@@H](C)C[C@H]1C ### Response: No
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? Cc1cc(NC(=O)c2ccccc2-c2nc(-c3ccccc3)no2)no1 ### Response: 1
ring_counting
### Instruction: Count the six-membered rings in the following molecule. COCc1ccc(OC)c(CN2CCc3nc([C@@H]4CCCC[NH+]4C)ncc3C2)c1 ### Response: 4
functional_group
### Instruction: Does the molecule contain a phenol group? CC[C@@H](COC)NC(=O)C(=O)Nc1ccc2c(c1)nc(C(C)(C)C)n2C ### Response: No
canonicalization
### Instruction: Canonicalize the following SMILES string. c1cc(ccc1N)-c1csc(n1)C ### Response: Cc1nc(-c2ccc(N)cc2)cs1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [1*]C(=O)CC[4*] Fragment 2: [1*]C(=O)CCN[5*] ### Response: CC[C@@H](Cc1ccc(C)cc1)N(C)C(=O)NCCC(=O)N(C)C
ring_counting
### Instruction: Count the five-membered rings in the following molecule. O=C(NNc1ccc(C(F)(F)F)cc1)c1scnc1C1CC1 ### Response: 1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [5*]Nc1ccc(S(C)(=O)=O)cc1 Fragment 2: [1*]C(=O)CS[11*] ### Response: C[C@H](SCC(=O)Nc1ccc(S(C)(=O)=O)cc1)c1ccc(F)cc1
ring_counting
### Instruction: Count the six-membered rings in the following molecule. Cc1cc(CN(C)C(=O)[C@H](C)CCc2ccccc2F)no1 ### Response: 1
canonicalization
### Instruction: Canonicalize the following SMILES string. C(c1nnn(c1)CC(=O)N)(N[C@H]1CCCc2cc(OC(F)F)ccc12)=O ### Response: NC(=O)Cn1cc(C(=O)N[C@H]2CCCc3cc(OC(F)F)ccc32)nn1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? COc1c2ccoc2nc2c(OC)c(O[C@@H]3O[C@@H](C)[C@@H](O)[C@H](O)[C@@H]3O)ccc12 ### Response: 1
canonicalization
### Instruction: Canonicalize the following SMILES string. c1(cc(C(=O)NCCC)ccc1)CNC(c1ccc(cc1)-n1ccnc1)=O ### Response: CCCNC(=O)c1cccc(CNC(=O)c2ccc(-n3ccnc3)cc2)c1
ring_counting
### Instruction: Count the five-membered rings in the following molecule. CCc1nn(C)cc1C(=O)N(Cc1ccc(O)cc1)CC1CC1 ### Response: 1
canonicalization
### Instruction: Canonicalize the following SMILES string. O1CCCC[C@@H]1ONC(c1c(N2CCC(C)CC2)ccc([N+]([O-])=O)c1)=O ### Response: CC1CCN(c2ccc([N+](=O)[O-])cc2C(=O)NO[C@H]2CCCCO2)CC1
ring_counting
### Instruction: Count the six-membered rings in the following molecule. CC(C)NC(=O)C1CCN(S(=O)(=O)c2cc(Cl)ccc2Cl)CC1 ### Response: 2
functional_group
### Instruction: Does the molecule contain a aldehyde group? COC(=O)CCn1c(=O)cc(C(F)F)c2cn(Cc3ccccc3)nc21 ### Response: No
ring_counting
### Instruction: Count the six-membered rings in the following molecule. COc1ccc([C@H](NS(=O)(=O)c2cccc(C(C)=O)c2)c2ccccc2)cc1 ### Response: 3
ring_counting
### Instruction: Count the six-membered rings in the following molecule. COc1ccc(NC(=O)c2oc3ccccc3c2NC(=O)C(C)(C)C)cc1OC ### Response: 2
functional_group
### Instruction: Does the molecule contain a ether group? COc1ccc(C)cc1[C@H](C)[NH2+]Cc1cccc(C(N)=O)c1 ### Response: Yes
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CN(C[C@@H]1CCC[NH2+]1)c1nccs1 ### Response: 1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? O=C(c1csc(-c2ccccc2Cl)n1)N1CCOC[C@@H]1CCO ### Response: 2
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? COC(=O)[C@@H]1CCCCC[C@@H]1NC(=O)c1ccnc(-n2cncn2)c1 ### Response: 1
functional_group
### Instruction: Does the molecule contain a carboxyl group? CS(=O)(=O)CCC(=O)c1ccc(F)cc1 ### Response: No