task
stringclasses
5 values
input
stringlengths
89
339
functional_group
### Instruction: Does the molecule contain a thiol group? O=C(N[C@@H](CCCO)c1ccccc1)c1cc(Cl)ccc1O ### Response: No
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [16*]c1ccccc1 Fragment 2: [9*]n1cc(C#N)c(C)n1 ### Response: Cc1nn(-c2ccccc2)cc1C#N
canonicalization
### Instruction: Canonicalize the following SMILES string. c1cc(c2ccccc2c1)/C=C/c1ncnc(c1)C([O-])=O ### Response: O=C([O-])c1cc(/C=C/c2cccc3ccccc23)ncn1
functional_group
### Instruction: Does the molecule contain a thiol group? CC1CC[NH+](C[C@H]2CCCN(C(=O)[C@H](C)NS(=O)(=O)c3ccccc3)C2)CC1 ### Response: No
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [5*]NC[C@H]1CCCO1 Fragment 2: [1*]C(=O)c1ccc(CC)cc1 ### Response: CCc1ccc(C(=O)Nc2sccc2C(=O)NC[C@H]2CCCO2)cc1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? Cc1sc(-c2ccco2)nc1C(=O)OC[C@@H]1COc2ccccc2O1 ### Response: 1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [5*]N(C)S(=O)(=O)c1ccc([16*])cc1 Fragment 2: [8*]CC#C ### Response: C#CCn1/c(=N/C(=O)c2ccc(S(=O)(=O)N(C)C(C)C)cc2)sc2ccc([N+](=O)[O-])cc21
canonicalization
### Instruction: Canonicalize the following SMILES string. c1c(ccc(OC)c1)S(Nc1c(C(=O)[O-])cccc1C)(=O)=O ### Response: COc1ccc(S(=O)(=O)Nc2c(C)cccc2C(=O)[O-])cc1
functional_group
### Instruction: Does the molecule contain a aldehyde group? FC(F)(F)c1nc2ccccc2n1CC1CC[NH2+]CC1 ### Response: No
canonicalization
### Instruction: Canonicalize the following SMILES string. C[C@@H](CC(N1CCCN(C(=O)c2ccc(F)cc2)CC1)=O)C(C)C ### Response: CC(C)[C@@H](C)CC(=O)N1CCCN(C(=O)c2ccc(F)cc2)CC1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? O=C(Nc1nnc(C2CCCCC2)o1)[C@@H]1COc2ccccc2O1 ### Response: 1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? COc1ccc([C@@H]2C[C@@H](c3ccc(Cl)cc3)n3ncnc3N2C(=O)C2CC2)cc1 ### Response: 1
functional_group
### Instruction: Does the molecule contain a hydroxyl group? COc1ccc(N2C[C@H](C(=O)N[C@@H](C)C(=O)NC3CCCC3)CC2=O)cc1 ### Response: No
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [5*][NH+]1CC[C@H]([15*])C1 Fragment 2: [8*]CC(C)C ### Response: COC(=O)Cc1ccc(C[NH+]2CC[C@H](CC(C)C)C2)s1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [4*]Cc1csc(CC)n1 Fragment 2: [5*][NH2+][C@@H]1c2cccc(F)c2CC[C@H]1C ### Response: CCc1nc(C[NH2+][C@@H]2c3cccc(F)c3CC[C@H]2C)cs1
functional_group
### Instruction: Does the molecule contain a amine group? COc1cc(C)ccc1OCC(=O)NNC(=O)c1ccccc1 ### Response: No
canonicalization
### Instruction: Canonicalize the following SMILES string. n1c(ncc(Cl)c1C(=O)[C@H](C#N)c1n(C)c2c(cccc2)n1)SC ### Response: CSc1ncc(Cl)c(C(=O)[C@H](C#N)c2nc3ccccc3n2C)n1
canonicalization
### Instruction: Canonicalize the following SMILES string. c1cccc2c1c(C[C@H](C(Nc1ccc3c(nc(o3)C)c1)=O)NC(=O)c1cccs1)c[nH]2 ### Response: Cc1nc2cc(NC(=O)[C@@H](Cc3c[nH]c4ccccc34)NC(=O)c3cccs3)ccc2o1
canonicalization
### Instruction: Canonicalize the following SMILES string. C([C@H](NC(=O)C1CCC(NN=1)=O)C)OC ### Response: COC[C@@H](C)NC(=O)C1=NNC(=O)CC1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? C[NH+](C)Cc1noc(CCCCC(=O)[O-])n1 ### Response: 5
ring_counting
### Instruction: Count the five-membered rings in the following molecule. NC(=O)c1cccc(CSc2ccc(N)cc2Cl)c1 ### Response: 0
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? C[C@H](SCc1cc(=O)n2ccsc2n1)C(=O)NCc1cccs1 ### Response: 3
canonicalization
### Instruction: Canonicalize the following SMILES string. O=C(N[C@@H]1C[C@@H](CC1)SC)c1cccc(c1)I ### Response: CS[C@@H]1CC[C@H](NC(=O)c2cccc(I)c2)C1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [5*]N([5*])C(C)C Fragment 2: [4*]Cc1ccc(S(=O)(=O)NC)s1 ### Response: CNS(=O)(=O)c1ccc(CNC(=O)N(C[C@@H]2C[C@@H]2C)C(C)C)s1
ring_counting
### Instruction: Count the five-membered rings in the following molecule. C[C@@](O)(CN[C@H](Cc1ccncc1)C(F)(F)F)c1ccc(F)cc1 ### Response: 0
functional_group
### Instruction: Does the molecule contain a aromatic_ring group? O=c1cc(CSc2n[nH]c(=O)n2C[C@@H]2CCCO2)c2c(ccc3ccccc32)o1 ### Response: Yes
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CCc1[nH]nc(NC(=O)Nc2ccc(OCCOC)nc2)c1C ### Response: 2
functional_group
### Instruction: Does the molecule contain a ester group? O=C(NNC(=O)c1ccc2c(c1)OCCO2)c1ccoc1 ### Response: No
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [5*]N1/C(=N/C([6*])=O)S[C@@H]2CS(=O)(=O)C[C@@H]21 Fragment 2: [16*]c1ccc2c(c1)OCCO2 ### Response: COc1ccc(C(=O)/N=C2\S[C@@H]3CS(=O)(=O)C[C@@H]3N2c2ccc3c(c2)OCCO3)cc1
canonicalization
### Instruction: Canonicalize the following SMILES string. C1CCC(C1)CN(C)C(=O)C(Nc1cccc(c1)SC(F)F)=O ### Response: CN(CC1CCCC1)C(=O)C(=O)Nc1cccc(SC(F)F)c1
canonicalization
### Instruction: Canonicalize the following SMILES string. c1c(cc(cc1)I)C(=O)Nc1ccc(I)cc1 ### Response: O=C(Nc1ccc(I)cc1)c1cccc(I)c1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? C[C@]1(CNC(=O)Nc2ccc3c(c2)COC3)CCCS1 ### Response: 1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [16*]c1ccc(F)cc1 Fragment 2: [5*]N1CCN([5*])CC1 ### Response: Oc1ccccc1N1CCN(c2ncnc3scc(-c4ccc(F)cc4)c23)CC1
canonicalization
### Instruction: Canonicalize the following SMILES string. CCn1c(nc2ccccc21)CNc1cccc(C)c1 ### Response: CCn1c(CNc2cccc(C)c2)nc2ccccc21
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? C[C@@H]1C[C@@H](c2cccc(F)c2)N(C(=O)N[C@@H](C)c2cccc(C#N)c2)C1 ### Response: 2
ring_counting
### Instruction: Count the six-membered rings in the following molecule. Clc1nn(CN2CC[C@H](Oc3cccnc3)C2)c2ccccc12 ### Response: 2
functional_group
### Instruction: Does the molecule contain a ether group? c1cc(C[NH2+][C@@H](c2cccs2)C2CCCC2)cc(Cn2ccnc2)c1 ### Response: No
functional_group
### Instruction: Does the molecule contain a ketone group? CCS(=O)(=O)c1cccc(-c2nc(CCOC)no2)c1 ### Response: No
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CC(C)c1ccc([C@@H]2C[C@@H]2/C([O-])=N/S(=O)(=O)CCCF)cc1 ### Response: 3
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? O=Cc1c(-c2ccccn2)nc2sccn12 ### Response: 1
ring_counting
### Instruction: Count the six-membered rings in the following molecule. O=C(CCc1cccc([N+](=O)[O-])c1)Nc1ccc(Cl)nc1 ### Response: 2
functional_group
### Instruction: Does the molecule contain a aromatic_ring group? CCCC[C@]1(CC)CC(=O)NC(=O)[C@H]1c1ccccc1Br ### Response: Yes
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [5*]N1C(=N)NCC12CC[NH+](C)CC2 Fragment 2: [16*]c1ccc(Cl)c(Br)c1 ### Response: C[NH+]1CCC2(CC1)CNC(=N)N2c1ccc(Cl)c(Br)c1
functional_group
### Instruction: Does the molecule contain a ether group? Cn1c(=O)n(CC(=O)N[C@@H]2CCCc3ccc(F)cc32)c2ccccc21 ### Response: No
canonicalization
### Instruction: Canonicalize the following SMILES string. COc1c(C(OCC)=O)cc(Cl)c(NC(c2cccc(c2)OC)=O)c1 ### Response: CCOC(=O)c1cc(Cl)c(NC(=O)c2cccc(OC)c2)cc1OC
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CC(C)NS(=O)(=O)c1cc(C(=O)N2C[C@H](C)O[C@@H](C)C2)ccc1F ### Response: 3
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? O=C([O-])c1cccc(S(=O)(=O)Nc2ccccc2N2CCOCC2)c1 ### Response: 1
functional_group
### Instruction: Does the molecule contain a aromatic_ring group? Cc1nc(CSc2nncc3ccccc23)nc2ccccc12 ### Response: Yes
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [1*]C(=O)c1c(C[4*])nc2ccccc2c1C Fragment 2: [3*]OCC ### Response: CCOC(=O)c1c(CSc2cc(C)nc(C)n2)nc2ccccc2c1C
functional_group
### Instruction: Does the molecule contain a ether group? C=CCn1c(/N=C/c2cc(Br)ccc2O)[nH+]c2ccccc21 ### Response: No
ring_counting
### Instruction: Count the six-membered rings in the following molecule. N/C(=N/O)c1ccc(C(F)(F)F)nc1OCc1ccco1 ### Response: 1
canonicalization
### Instruction: Canonicalize the following SMILES string. c12ccc(cc1NC(CO2)=O)S(Nc1ccccc1F)(=O)=O ### Response: O=C1COc2ccc(S(=O)(=O)Nc3ccccc3F)cc2N1
functional_group
### Instruction: Does the molecule contain a ester group? CC(C)(C)Oc1cc(CNC(=O)NC[C@@H]2Cc3ccccc32)ccn1 ### Response: No
functional_group
### Instruction: Does the molecule contain a halide group? Cc1ccccc1OCC(=O)O[C@@H](C)c1nccs1 ### Response: No
ring_counting
### Instruction: Count the six-membered rings in the following molecule. CCCCNC(=O)/C(=C\c1cccs1)NC(=O)c1ccc(C)cc1 ### Response: 1
functional_group
### Instruction: Does the molecule contain a amide group? COc1cc(C)cc(O)c1C=O ### Response: No
functional_group
### Instruction: Does the molecule contain a aromatic_ring group? CCc1cc(=O)[nH]c(SCC(=O)Nc2cccc(C(C)=O)c2)n1 ### Response: Yes
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [8*]C(C)(C)C Fragment 2: [4*]CCO ### Response: CCN(CCO)C(=O)N[C@H]1CC(=O)N(C(C)(C)C)C1
ring_counting
### Instruction: Count the five-membered rings in the following molecule. Cc1cc(CN(C)C(=O)N[C@H]2CCOc3ccccc32)no1 ### Response: 1
functional_group
### Instruction: Does the molecule contain a amide group? CCCc1nc2sc3c(SCC(=O)Nc4ccccn4)ncnc3c2c2c1CCCC2 ### Response: Yes
ring_counting
### Instruction: Count the six-membered rings in the following molecule. CC(C)Oc1cccc(C(=O)Nc2nn(C)cc2C#N)n1 ### Response: 1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [1*]C(=O)c1ccc(F)c(N[5*])c1 Fragment 2: [4*]Cc1ccc(CN[5*])cc1 ### Response: CC(=O)Nc1cc(C(=O)NCc2ccc(C[NH+]3C[C@H](C)C[C@H](C)C3)cc2)ccc1F
ring_counting
### Instruction: Count the six-membered rings in the following molecule. CC(C)C(=O)NC[C@@H]1CCC[NH+](C[C@H](O)c2cccc(Cl)c2)C1 ### Response: 2
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CCc1ccc([C@H](C)NC(=O)CN(C)S(=O)(=O)c2ccc(Cl)nc2)cc1 ### Response: 2
functional_group
### Instruction: Does the molecule contain a ketone group? COc1ccc(Cl)cc1NC(=O)C(=O)NCC[NH+]1CCC(c2ccsc2)CC1 ### Response: No
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? C[C@@H]1CN(C(C)(C)CNS(=O)(=O)c2ccc([N+](=O)[O-])cc2)C[C@H](C)O1 ### Response: 3
functional_group
### Instruction: Does the molecule contain a nitro group? O=C(Nc1cc(-c2ccccc2)nn1[C@@H]1CCS(=O)(=O)C1)c1ccco1 ### Response: No
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [5*]N[C@H]1CCCc2ccccc21 Fragment 2: [4*]Cc1cnn([9*])c1 ### Response: O=C(NCc1cnn(-c2ccccc2)c1)N[C@H]1CCCc2ccccc21
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? COc1cc(NC(=O)COc2ccc([N+](=O)[O-])cc2)c(OC)cc1Br ### Response: 2
canonicalization
### Instruction: Canonicalize the following SMILES string. O(C)c1ccc2oc(c(c2c1)C)C(NNC(Nc1c(F)ccc(C)c1)=S)=O ### Response: COc1ccc2oc(C(=O)NNC(=S)Nc3cc(C)ccc3F)c(C)c2c1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [4*][C@H]([8*])C(=O)[O-] Fragment 2: [9*]n1cccn1 ### Response: O=C([O-])[C@@H](c1ccc(-n2cccn2)cc1)[NH+]1CCN(c2ncccn2)CC1
functional_group
### Instruction: Does the molecule contain a aldehyde group? Cc1ccc(NC(=O)c2cccc(Br)c2)cc1F ### Response: No
functional_group
### Instruction: Does the molecule contain a aromatic_ring group? NC(=O)c1cc([N+](=O)[O-])ccc1NCCC1=CCCCC1 ### Response: Yes
functional_group
### Instruction: Does the molecule contain a ester group? COC(=O)N(C)CC1CC[NH2+]CC1 ### Response: Yes
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? Cc1ccc(NC(=O)Cn2cnc3sc(-c4nc(-c5ccccc5)no4)c(C)c3c2=O)c(Cl)c1 ### Response: 2
ring_counting
### Instruction: Count the five-membered rings in the following molecule. CCOC(=O)[C@@](O)(CC)[C@H]1CCCC(C)(C)CC1 ### Response: 0
ring_counting
### Instruction: Count the five-membered rings in the following molecule. CCn1ccc2cc(C=O)ccc21 ### Response: 1
ring_counting
### Instruction: Count the six-membered rings in the following molecule. C[NH2+]C[C@H](C)C(=O)Nc1snc(C)c1C(=O)[O-] ### Response: 0
functional_group
### Instruction: Does the molecule contain a ether group? Cc1cncc(C(=O)Nc2ccc(C(=O)N3C[C@@H](C)O[C@H](C)C3)cc2)c1 ### Response: Yes
canonicalization
### Instruction: Canonicalize the following SMILES string. O=[S@@](C)c1ccc(cc1)C[NH+](CC(Nc1c(C)cccc1C)=O)CC ### Response: CC[NH+](CC(=O)Nc1c(C)cccc1C)Cc1ccc([S@](C)=O)cc1
canonicalization
### Instruction: Canonicalize the following SMILES string. C(C)C(NC(=O)NCc1cccc(c1)Cn1cncc1)CC ### Response: CCC(CC)NC(=O)NCc1cccc(Cn2ccnc2)c1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [9*]n1nc([14*])oc1=S Fragment 2: [8*]Cc1csc(C)n1 ### Response: Cc1nc(Cc2nn(C[NH+]3CCc4ccccc4C3)c(=S)o2)cs1
ring_counting
### Instruction: Count the six-membered rings in the following molecule. C[C@@H](C(=O)N1CCCC1)N1CCN(C(=O)CC2(O)CCCC2)CC1 ### Response: 1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [1*]C(=O)[C@H]1CC(=O)N([10*])C1 Fragment 2: [5*]Nc1cccc(Cl)c1 ### Response: O=C(Nc1cccc(Cl)c1)[C@H]1CC(=O)N(c2ccc(Br)cc2)C1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [3*]Oc1cccc(C#N)c1 Fragment 2: [16*]c1cccc(C#N)c1 ### Response: N#Cc1cccc(OCc2ccc(SC(F)F)cc2)c1
functional_group
### Instruction: Does the molecule contain a hydroxyl group? O=C(C[C@H](O)c1cccc(F)c1)NC[C@H](c1ccco1)[NH+]1CCCC1 ### Response: Yes
functional_group
### Instruction: Does the molecule contain a ether group? COc1ccccc1C[NH+](C)[C@H]1CCC[C@@H]1SC ### Response: Yes
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [4*]Cc1ccnc2ccccc12 Fragment 2: [11*]S/C(N)=[NH+]\N ### Response: N/[NH+]=C(/N)SCc1ccnc2ccccc12
canonicalization
### Instruction: Canonicalize the following SMILES string. [C@@H](c1ccco1)(O)CNC(=O)[C@@H]1CCC(N1Cc1ccc(C)cc1)=O ### Response: Cc1ccc(CN2C(=O)CC[C@H]2C(=O)NC[C@@H](O)c2ccco2)cc1
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [4*]CC(=O)[O-] Fragment 2: [5*]Nc1ccc2c(c1)CCCC2 ### Response: O=C([O-])COCC(=O)Nc1ccc2c(c1)CCCC2
ring_counting
### Instruction: Count the five-membered rings in the following molecule. Cc1ccc(C(=O)NC2CCN(S(=O)(=O)c3ccc(C#N)cc3)CC2)o1 ### Response: 1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? [O-][N+]1=C(c2ccccc2)C(c2ccccc2)=[N+]([O-])[C@@H]2CCCC[C@H]21 ### Response: 0
canonicalization
### Instruction: Canonicalize the following SMILES string. O1C[C@@H](CC1)c1cc(cc(Br)n1)Br ### Response: Brc1cc(Br)nc([C@@H]2CCOC2)c1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CCn1c(C)cc(C(=O)NNc2nc(-c3ccncc3)no2)c1C ### Response: 2
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? C[C@H](C[NH2+]Cc1ccccc1Br)C[C@@H](C)O ### Response: 5
canonicalization
### Instruction: Canonicalize the following SMILES string. C[C@H]1CC(N2CCN(CC2)C(=O)N2CCOCC2)C[C@@H](C)O1 ### Response: C[C@@H]1CC(N2CCN(C(=O)N3CCOCC3)CC2)C[C@H](C)O1
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? Cc1ccc([C@](C)(O)CNC(=O)Nc2cnccc2C)o1 ### Response: 3
chain_length
### Instruction: What is the length of the longest acyclic carbon chain in the molecule? CN(C(=O)CNc1ccc(Cl)cc1)c1ccccc1 ### Response: 2
fragment_assembly
### Instruction: Assemble these two molecular fragments into a single molecule. Fragment 1: [6*]C(N)=O Fragment 2: [1*]C(=O)C([1*])=O ### Response: NC(=O)c1cc(NC(=O)C(=O)NCc2cccc(Cl)c2)ccc1F
functional_group
### Instruction: Does the molecule contain a amine group? COC[C@@H](N[C@H](C)c1ccc(-n2ccnc2)cc1)c1ccc(F)c(F)c1 ### Response: Yes