query stringlengths 53 129 | positive listlengths 1 8 | negative listlengths 10 10 | system stringlengths 70 592 |
|---|---|---|---|
What is the biomedical concept corresponding to 'mycn'? | [
"mycn proto-oncogene, bhlh transcription factor (homo sapiens)",
"mycn (homo sapiens)"
] | [
"mycn (xenopus laevis) (mycn proto-oncogene, bhlh transcription factor s homeolog (xenopus laevis))",
"mycn (xenopus laevis) (mycn proto-oncogene, bhlh transcription factor l homeolog (xenopus laevis))",
"mycn proto-oncogene, bhlh transcription factor (xenopus tropicalis)",
"mycn, opposite strand (mus musculu... | Given the context 'We have previously demonstrated that the zinc-finger protein Yaf2 interacts with the central region of MycN and enhances MycN dependent transcriptional activation.', answer the user's query. |
What is the biomedical concept corresponding to 'mycn'? | [
"mycn proto-oncogene, bhlh transcription factor (homo sapiens)",
"mycn (homo sapiens)"
] | [
"mycn (xenopus laevis) (mycn proto-oncogene, bhlh transcription factor s homeolog (xenopus laevis))",
"mycn (xenopus laevis) (mycn proto-oncogene, bhlh transcription factor l homeolog (xenopus laevis))",
"mycn proto-oncogene, bhlh transcription factor (xenopus tropicalis)",
"mycn, opposite strand (mus musculu... | Given the context 'We have previously demonstrated that the zinc-finger protein Yaf2 interacts with the central region of MycN and enhances MycN dependent transcriptional activation.', answer the user's query. |
What is the biomedical concept corresponding to 'yaf2'? | [
"yaf2 (homo sapiens)"
] | [
"yaf1 (homo sapiens)",
"yaf2-b (xenopus laevis) (yy1 associated factor 2 s homeolog (xenopus laevis))",
"yaf2-a (xenopus laevis) (yy1 associated factor 2 s homeolog (xenopus laevis))",
"yaf2-a (xenopus laevis) (yy1 associated factor 2 l homeolog (xenopus laevis))",
"yaf2-b (xenopus laevis) (yy1 associated f... | Given the context 'Here we show that Yaf2 also binds to the Myc protein in vivo and in vitro.', answer the user's query. |
What is the biomedical concept corresponding to 'myc'? | [
"myc proto-oncogene, bhlh transcription factor (homo sapiens)",
"myc (homo sapiens)",
"c-myc (homo sapiens)"
] | [
"myc (drosophila melanogaster)",
"myc (mus musculus) (myelocytomatosis oncogene (mus musculus))",
"c-myc (drosophila melanogaster)",
"v-myc avian myelocytomatosis viral oncogene homolog (gallus gallus)",
"l-myc (homo sapiens)",
"d-myc (drosophila melanogaster)",
"mycl proto-oncogene, bhlh transcription ... | Given the context 'Here we show that Yaf2 also binds to the Myc protein in vivo and in vitro.', answer the user's query. |
What is the biomedical concept corresponding to 'mycn'? | [
"mycn proto-oncogene, bhlh transcription factor (homo sapiens)",
"mycn (homo sapiens)"
] | [
"mycn (xenopus laevis) (mycn proto-oncogene, bhlh transcription factor s homeolog (xenopus laevis))",
"mycn (xenopus laevis) (mycn proto-oncogene, bhlh transcription factor l homeolog (xenopus laevis))",
"mycn proto-oncogene, bhlh transcription factor (xenopus tropicalis)",
"mycn, opposite strand (mus musculu... | Given the context 'In contrast to the activating effect on MycN function, Yaf2 inhibits Myc mediated transactivation and transformation.', answer the user's query. |
What is the biomedical concept corresponding to 'yaf2'? | [
"yaf2 (homo sapiens)"
] | [
"yaf1 (homo sapiens)",
"yaf2-b (xenopus laevis) (yy1 associated factor 2 s homeolog (xenopus laevis))",
"yaf2-a (xenopus laevis) (yy1 associated factor 2 s homeolog (xenopus laevis))",
"yaf2-a (xenopus laevis) (yy1 associated factor 2 l homeolog (xenopus laevis))",
"yaf2-b (xenopus laevis) (yy1 associated f... | Given the context 'In contrast to the activating effect on MycN function, Yaf2 inhibits Myc mediated transactivation and transformation.', answer the user's query. |
What is the biomedical concept corresponding to 'myc'? | [
"myc proto-oncogene, bhlh transcription factor (homo sapiens)",
"myc (homo sapiens)",
"c-myc (homo sapiens)"
] | [
"myc (drosophila melanogaster)",
"myc (mus musculus) (myelocytomatosis oncogene (mus musculus))",
"c-myc (drosophila melanogaster)",
"v-myc avian myelocytomatosis viral oncogene homolog (gallus gallus)",
"l-myc (homo sapiens)",
"d-myc (drosophila melanogaster)",
"mycl proto-oncogene, bhlh transcription ... | Given the context 'In contrast to the activating effect on MycN function, Yaf2 inhibits Myc mediated transactivation and transformation.', answer the user's query. |
What is the biomedical concept corresponding to 'myc'? | [
"myc proto-oncogene, bhlh transcription factor (homo sapiens)",
"myc (homo sapiens)",
"c-myc (homo sapiens)"
] | [
"myc (drosophila melanogaster)",
"myc (mus musculus) (myelocytomatosis oncogene (mus musculus))",
"c-myc (drosophila melanogaster)",
"v-myc avian myelocytomatosis viral oncogene homolog (gallus gallus)",
"l-myc (homo sapiens)",
"d-myc (drosophila melanogaster)",
"mycl proto-oncogene, bhlh transcription ... | Given the context 'This differential influence on two members of the Myc family gives insight into a new mechanism to modulate the biological activities of Myc transcription factors.', answer the user's query. |
What is the biomedical concept corresponding to 'myc'? | [
"myc proto-oncogene, bhlh transcription factor (homo sapiens)",
"myc (homo sapiens)",
"c-myc (homo sapiens)"
] | [
"myc (drosophila melanogaster)",
"myc (mus musculus) (myelocytomatosis oncogene (mus musculus))",
"c-myc (drosophila melanogaster)",
"v-myc avian myelocytomatosis viral oncogene homolog (gallus gallus)",
"l-myc (homo sapiens)",
"d-myc (drosophila melanogaster)",
"mycl proto-oncogene, bhlh transcription ... | Given the context 'This differential influence on two members of the Myc family gives insight into a new mechanism to modulate the biological activities of Myc transcription factors.', answer the user's query. |
What is the biomedical concept corresponding to 'keratinocyte growth factor receptor'? | [
"fibroblast growth factor receptor 2 (homo sapiens)",
"fgfr2 (homo sapiens)",
"kgfr (homo sapiens)"
] | [
"fibroblast growth factor receptor 1 (homo sapiens)",
"fibroblast growth factor receptor 3 (homo sapiens)",
"fibroblast growth factor receptor 4 (homo sapiens)",
"fibroblast growth factor receptor-like 1 (gallus gallus)",
"flg (homo sapiens) (fibroblast growth factor receptor 1 (homo sapiens))",
"fibrobla... | Given the context 'Bacteria expressing the kinase domain of the keratinocyte growth factor receptor (bek/fibroblast growth factor receptor 2) were infected with a fibroblast cDNA library in a phagemid prokaryotic expression vector and screened with a monoclonal anti-phosphotyrosine antibody.', answer the user's query. |
What is the biomedical concept corresponding to 'bek'? | [
"bek (homo sapiens)"
] | [
"blk (homo sapiens)",
"elk (homo sapiens) (eph receptor b1 (homo sapiens))",
"ekb (homo sapiens)",
"cek (homo sapiens)",
"eph receptor b1 (bos taurus)",
"eph receptor b3 (bos taurus)",
"eph receptor b2 (bos taurus)",
"bef (homo sapiens)",
"brk1 (bos taurus)",
"eph receptor b4 (bos taurus)"
] | Given the context 'Bacteria expressing the kinase domain of the keratinocyte growth factor receptor (bek/fibroblast growth factor receptor 2) were infected with a fibroblast cDNA library in a phagemid prokaryotic expression vector and screened with a monoclonal anti-phosphotyrosine antibody.', answer the user's query. |
What is the biomedical concept corresponding to 'fibroblast growth factor receptor 2'? | [
"fibroblast growth factor receptor 2 (homo sapiens)",
"fgfr2 (homo sapiens)",
"cfd1 (homo sapiens) (fibroblast growth factor receptor 2 (homo sapiens))"
] | [
"fibroblast growth factor receptor 3 (homo sapiens)",
"fibroblast growth factor receptor 1 (homo sapiens)",
"fibroblast growth factor receptor like 1 (homo sapiens)",
"fibroblast growth factor receptor 4 (homo sapiens)",
"fibroblast growth factor receptor 2 (gallus gallus)",
"fibroblast growth factor rece... | Given the context 'Bacteria expressing the kinase domain of the keratinocyte growth factor receptor (bek/fibroblast growth factor receptor 2) were infected with a fibroblast cDNA library in a phagemid prokaryotic expression vector and screened with a monoclonal anti-phosphotyrosine antibody.', answer the user's query. |
What is the biomedical concept corresponding to 'vh1-related (vhr) human protein'? | [
"vhr (homo sapiens)"
] | [
"vh3 (homo sapiens)",
"vhp (homo sapiens)",
"vh5 (homo sapiens)",
"vhx (homo sapiens)",
"vhnf1 (homo sapiens)",
"vhz (homo sapiens)",
"vhy (homo sapiens)",
"vho (homo sapiens)",
"dual specificity phosphatase 3 (vaccinia virus phosphatase vh1-related) (mus musculus)",
"vh1 (mus musculus)"
] | Given the context 'Both serine and tyrosine phosphatase activities were completely abolished by mutagenesis of a single cysteine residue conserved in VH1 and the VH1-related (VHR) human protein.', answer the user's query. |
What is the biomedical concept corresponding to 'vhr'? | [
"vhr (homo sapiens)"
] | [
"vha1 (drosophila melanogaster)",
"vhad (drosophila melanogaster)",
"vhaa (drosophila melanogaster)",
"vhae (drosophila melanogaster)",
"vhag (drosophila melanogaster)",
"vha-1 (caenorhabditis elegans)",
"vhy (homo sapiens)",
"vhr (mus musculus)",
"vho (homo sapiens)",
"vha67-1 (drosophila melanog... | Given the context 'These properties suggest that VHR is capable of regulating intracellular events mediated by both tyrosine and serine phosphorylation.', answer the user's query. |
What is the biomedical concept corresponding to 'ah receptor nuclear translocator'? | [
"aryl hydrocarbon receptor nuclear translocator (homo sapiens)",
"tango (homo sapiens) (aryl hydrocarbon receptor nuclear translocator (homo sapiens))",
"arnt (homo sapiens) (aryl hydrocarbon receptor nuclear translocator (homo sapiens))"
] | [
"aryl hydrocarbon receptor nuclear translocator homolog (caenorhabditis elegans)",
"aryl hydrocarbon receptor nuclear translocator (gallus gallus)",
"aryl hydrocarbon receptor nuclear translocator (xenopus tropicalis)",
"aryl hydrocarbon receptor nuclear translocator (rattus norvegicus)",
"aryl hydrocarbon ... | Given the context 'Identification of the Ah receptor nuclear translocator protein (Arnt) as a component of the DNA binding form of the Ah receptor.
', answer the user's query. |
What is the biomedical concept corresponding to 'arnt'? | [
"arnt (homo sapiens) (aryl hydrocarbon receptor nuclear translocator (homo sapiens))",
"arnt1 (homo sapiens)"
] | [
"arnt (drosophila melanogaster)",
"arnt (xenopus laevis) (aryl hydrocarbon receptor nuclear translocator s homeolog (xenopus laevis))",
"arnt1 (xenopus laevis) (aryl hydrocarbon receptor nuclear translocator s homeolog (xenopus laevis))",
"arntl (homo sapiens)",
"arnt1 (xenopus laevis) (aryl hydrocarbon rec... | Given the context 'Identification of the Ah receptor nuclear translocator protein (Arnt) as a component of the DNA binding form of the Ah receptor.
', answer the user's query. |
What is the biomedical concept corresponding to 'ah receptor'? | [
"aryl hydrocarbon receptor (homo sapiens)",
"ahr (homo sapiens)"
] | [
"ah (mus musculus) (aryl-hydrocarbon receptor (mus musculus))",
"ahh (homo sapiens) (aryl hydrocarbon receptor repressor (homo sapiens))",
"ahrr (homo sapiens) (aryl hydrocarbon receptor repressor (homo sapiens))",
"aryl hydrocarbon receptor (rattus norvegicus)",
"aryl hydrocarbon receptor (bos taurus)",
... | Given the context 'Identification of the Ah receptor nuclear translocator protein (Arnt) as a component of the DNA binding form of the Ah receptor.
', answer the user's query. |
What is the biomedical concept corresponding to 'ah (dioxin) receptor'? | [
"aryl hydrocarbon receptor (homo sapiens)",
"ahr (homo sapiens)"
] | [
"ahrr (homo sapiens) (aryl hydrocarbon receptor repressor (homo sapiens))",
"ahh (homo sapiens) (aryl hydrocarbon receptor repressor (homo sapiens))",
"ahr (xenopus laevis) (aryl hydrocarbon receptor s homeolog (xenopus laevis))",
"ahr (drosophila melanogaster)",
"ahrr1 (danio rerio)",
"ahr1 (danio rerio)... | Given the context 'The Ah (dioxin) receptor binds a number of widely disseminated environmental pollutants, including 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) and polycyclic aromatic hydrocarbons, and mediates their carcinogenic effects.', answer the user's query. |
What is the biomedical concept corresponding to 'cyp 1a1'? | [
"cyp1 (homo sapiens) (cytochrome p450 family 1 subfamily a member 1 (homo sapiens))",
"cytochrome p450 family 1 subfamily a member 1 (homo sapiens)",
"ahh (homo sapiens) (cytochrome p450 family 1 subfamily a member 1 (homo sapiens))",
"cp11 (homo sapiens) (cytochrome p450 family 1 subfamily a member 1 (homo s... | [
"cyp1alpha (homo sapiens)",
"cyp1a (xenopus laevis) (cytochrome p450 family 1 subfamily a member 1 s homeolog (xenopus laevis))",
"cyp1a (xenopus laevis) (cytochrome p450 family 1 subfamily a member 1 l homeolog (xenopus laevis))",
"cyp1a (danio rerio)",
"cyp1 (xenopus laevis) (cytochrome p450 family 1 subf... | Given the context 'The ligand-bound receptor activates Cyp 1a1 gene transcription through interaction with specific DNA sequences, termed xenobiotic responsive elements (XREs).', answer the user's query. |
What is the biomedical concept corresponding to 'ah receptor nuclear translocator'? | [
"aryl hydrocarbon receptor nuclear translocator (homo sapiens)",
"tango (homo sapiens) (aryl hydrocarbon receptor nuclear translocator (homo sapiens))",
"arnt (homo sapiens) (aryl hydrocarbon receptor nuclear translocator (homo sapiens))"
] | [
"aryl hydrocarbon receptor nuclear translocator homolog (caenorhabditis elegans)",
"aryl hydrocarbon receptor nuclear translocator (gallus gallus)",
"aryl hydrocarbon receptor nuclear translocator (xenopus tropicalis)",
"aryl hydrocarbon receptor nuclear translocator (rattus norvegicus)",
"aryl hydrocarbon ... | Given the context 'The Ah receptor nuclear translocator protein (Arnt) is required for Ah receptor function.', answer the user's query. |
What is the biomedical concept corresponding to 'arnt'? | [
"arnt (homo sapiens) (aryl hydrocarbon receptor nuclear translocator (homo sapiens))",
"arnt1 (homo sapiens)"
] | [
"arnt (drosophila melanogaster)",
"arnt (xenopus laevis) (aryl hydrocarbon receptor nuclear translocator s homeolog (xenopus laevis))",
"arnt1 (xenopus laevis) (aryl hydrocarbon receptor nuclear translocator s homeolog (xenopus laevis))",
"arntl (homo sapiens)",
"arnt1 (xenopus laevis) (aryl hydrocarbon rec... | Given the context 'The Ah receptor nuclear translocator protein (Arnt) is required for Ah receptor function.', answer the user's query. |
What is the biomedical concept corresponding to 'ah receptor'? | [
"aryl hydrocarbon receptor (homo sapiens)",
"ahr (homo sapiens)"
] | [
"ah (mus musculus) (aryl-hydrocarbon receptor (mus musculus))",
"ahh (homo sapiens) (aryl hydrocarbon receptor repressor (homo sapiens))",
"ahrr (homo sapiens) (aryl hydrocarbon receptor repressor (homo sapiens))",
"aryl hydrocarbon receptor (rattus norvegicus)",
"aryl hydrocarbon receptor (bos taurus)",
... | Given the context 'The Ah receptor nuclear translocator protein (Arnt) is required for Ah receptor function.', answer the user's query. |
What is the biomedical concept corresponding to 'arnt'? | [
"arnt (homo sapiens) (aryl hydrocarbon receptor nuclear translocator (homo sapiens))",
"arnt1 (homo sapiens)"
] | [
"arnt (drosophila melanogaster)",
"arnt (xenopus laevis) (aryl hydrocarbon receptor nuclear translocator s homeolog (xenopus laevis))",
"arnt1 (xenopus laevis) (aryl hydrocarbon receptor nuclear translocator s homeolog (xenopus laevis))",
"arntl (homo sapiens)",
"arnt1 (xenopus laevis) (aryl hydrocarbon rec... | Given the context 'Arnt is now shown to be a structural component of the XRE binding form of the Ah receptor.', answer the user's query. |
What is the biomedical concept corresponding to 'ah receptor'? | [
"aryl hydrocarbon receptor (homo sapiens)",
"ahr (homo sapiens)"
] | [
"ah (mus musculus) (aryl-hydrocarbon receptor (mus musculus))",
"ahh (homo sapiens) (aryl hydrocarbon receptor repressor (homo sapiens))",
"ahrr (homo sapiens) (aryl hydrocarbon receptor repressor (homo sapiens))",
"aryl hydrocarbon receptor (rattus norvegicus)",
"aryl hydrocarbon receptor (bos taurus)",
... | Given the context 'Arnt is now shown to be a structural component of the XRE binding form of the Ah receptor.', answer the user's query. |
What is the biomedical concept corresponding to 'arnt'? | [
"arnt (homo sapiens) (aryl hydrocarbon receptor nuclear translocator (homo sapiens))",
"arnt1 (homo sapiens)"
] | [
"arnt (drosophila melanogaster)",
"arnt (xenopus laevis) (aryl hydrocarbon receptor nuclear translocator s homeolog (xenopus laevis))",
"arnt1 (xenopus laevis) (aryl hydrocarbon receptor nuclear translocator s homeolog (xenopus laevis))",
"arntl (homo sapiens)",
"arnt1 (xenopus laevis) (aryl hydrocarbon rec... | Given the context 'Furthermore, Arnt and the ligand-binding subunit of the receptor were extracted as a complex from the nuclei of cells treated with ligand.', answer the user's query. |
What is the biomedical concept corresponding to 'arnt'? | [
"arnt (homo sapiens) (aryl hydrocarbon receptor nuclear translocator (homo sapiens))",
"arnt1 (homo sapiens)"
] | [
"arnt (drosophila melanogaster)",
"arnt (xenopus laevis) (aryl hydrocarbon receptor nuclear translocator s homeolog (xenopus laevis))",
"arnt1 (xenopus laevis) (aryl hydrocarbon receptor nuclear translocator s homeolog (xenopus laevis))",
"arntl (homo sapiens)",
"arnt1 (xenopus laevis) (aryl hydrocarbon rec... | Given the context 'Arnt contains a basic helix-loop-helix motif, which may be responsible for interacting with both the XRE and the ligand-binding subunit.', answer the user's query. |
What is the biomedical concept corresponding to 'saf-a'? | [
"saf-a (homo sapiens)"
] | [
"saf-a (drosophila melanogaster)",
"saf-b (homo sapiens)",
"saf-1 (homo sapiens)",
"saf-a2 (homo sapiens)",
"saf-2 (homo sapiens)",
"saf-b (drosophila melanogaster)",
"saf-3 (homo sapiens)",
"saf-a (xenopus laevis) (heterogeneous nuclear ribonucleoprotein u (scaffold attachment factor a) s homeolog (x... | Given the context 'Characterization of SAF-A, a novel nuclear DNA binding protein from HeLa cells with high affinity for nuclear matrix/scaffold attachment DNA elements.
', answer the user's query. |
What is the biomedical concept corresponding to 'sar'? | [
"sar (homo sapiens) (nuclear receptor subfamily 1 group i member 2 (homo sapiens))"
] | [
"sari (homo sapiens)",
"sra (drosophila melanogaster) (sarah (drosophila melanogaster))",
"sarp (homo sapiens)",
"sard (homo sapiens)",
"sarm (homo sapiens)",
"saraf (homo sapiens)",
"sar1 (drosophila melanogaster)",
"sarg (homo sapiens)",
"sarap (homo sapiens)",
"sar1 (arabidopsis thaliana) (supp... | Given the context 'We identified four proteins in nuclear extracts from HeLa cells which specifically bind to a scaffold attachment region (SAR) element from the human genome.', answer the user's query. |
What is the biomedical concept corresponding to 'saf-a'? | [
"saf-a (homo sapiens)"
] | [
"saf-a (drosophila melanogaster)",
"saf-b (homo sapiens)",
"saf-1 (homo sapiens)",
"saf-a2 (homo sapiens)",
"saf-2 (homo sapiens)",
"saf-b (drosophila melanogaster)",
"saf-3 (homo sapiens)",
"saf-a (xenopus laevis) (heterogeneous nuclear ribonucleoprotein u (scaffold attachment factor a) s homeolog (x... | Given the context 'Of these four proteins, SAF-A (scaffold attachment factor A), shows the highest affinity for several homologous and heterologous SAR elements from vertebrate cells.', answer the user's query. |
What is the biomedical concept corresponding to 'scaffold attachment factor a'? | [
"saf-a (homo sapiens)"
] | [
"scaffold attachment factor b (homo sapiens)",
"scaffold attachment factor b (drosophila melanogaster)",
"scaffold attachment factor b2 (homo sapiens)",
"scaffold attachment factor b (xenopus tropicalis)",
"scaffold attachment factor b s homeolog (xenopus laevis)",
"het (homo sapiens) (scaffold attachment... | Given the context 'Of these four proteins, SAF-A (scaffold attachment factor A), shows the highest affinity for several homologous and heterologous SAR elements from vertebrate cells.', answer the user's query. |
What is the biomedical concept corresponding to 'sar'? | [
"sar (homo sapiens) (nuclear receptor subfamily 1 group i member 2 (homo sapiens))"
] | [
"sari (homo sapiens)",
"sra (drosophila melanogaster) (sarah (drosophila melanogaster))",
"sarp (homo sapiens)",
"sard (homo sapiens)",
"sarm (homo sapiens)",
"saraf (homo sapiens)",
"sar1 (drosophila melanogaster)",
"sarg (homo sapiens)",
"sarap (homo sapiens)",
"sar1 (arabidopsis thaliana) (supp... | Given the context 'Of these four proteins, SAF-A (scaffold attachment factor A), shows the highest affinity for several homologous and heterologous SAR elements from vertebrate cells.', answer the user's query. |
What is the biomedical concept corresponding to 'saf-a'? | [
"saf-a (homo sapiens)"
] | [
"saf-a (drosophila melanogaster)",
"saf-b (homo sapiens)",
"saf-1 (homo sapiens)",
"saf-a2 (homo sapiens)",
"saf-2 (homo sapiens)",
"saf-b (drosophila melanogaster)",
"saf-3 (homo sapiens)",
"saf-a (xenopus laevis) (heterogeneous nuclear ribonucleoprotein u (scaffold attachment factor a) s homeolog (x... | Given the context 'SAF-A is an abundant nuclear protein and a constituent of the nuclear matrix and scaffold.', answer the user's query. |
What is the biomedical concept corresponding to 'saf-a'? | [
"saf-a (homo sapiens)"
] | [
"saf-a (drosophila melanogaster)",
"saf-b (homo sapiens)",
"saf-1 (homo sapiens)",
"saf-a2 (homo sapiens)",
"saf-2 (homo sapiens)",
"saf-b (drosophila melanogaster)",
"saf-3 (homo sapiens)",
"saf-a (xenopus laevis) (heterogeneous nuclear ribonucleoprotein u (scaffold attachment factor a) s homeolog (x... | Given the context 'SAF-A binds at multiple sites to the human SAR element; competition studies with synthetic polynucleotides indicate that these sites most probably reside in the multitude of A/T-stretches which are distributed throughout this element.', answer the user's query. |
What is the biomedical concept corresponding to 'sar'? | [
"sar (homo sapiens) (nuclear receptor subfamily 1 group i member 2 (homo sapiens))"
] | [
"sari (homo sapiens)",
"sra (drosophila melanogaster) (sarah (drosophila melanogaster))",
"sarp (homo sapiens)",
"sard (homo sapiens)",
"sarm (homo sapiens)",
"saraf (homo sapiens)",
"sar1 (drosophila melanogaster)",
"sarg (homo sapiens)",
"sarap (homo sapiens)",
"sar1 (arabidopsis thaliana) (supp... | Given the context 'SAF-A binds at multiple sites to the human SAR element; competition studies with synthetic polynucleotides indicate that these sites most probably reside in the multitude of A/T-stretches which are distributed throughout this element.', answer the user's query. |
What is the biomedical concept corresponding to 'leukosialin'? | [
"spn (homo sapiens) (sialophorin (homo sapiens))",
"sialophorin (homo sapiens)"
] | [
"leukosialin-like (rattus norvegicus)",
"sp-ii (xenopus laevis) (integrin-binding sialoprotein l homeolog (xenopus laevis))",
"gp58 (homo sapiens)",
"ag3 (homo sapiens) (cd58 molecule (homo sapiens))",
"cd18 (homo sapiens)",
"gma (xenopus laevis) (myelin associated glycoprotein l homeolog (xenopus laevis)... | Given the context 'Because the antibody used was found to detect most efficiently the oligosaccharide products attached to leukosialin, the CHO cells were also stably transfected with leukosialin cDNA.', answer the user's query. |
What is the biomedical concept corresponding to 'leukosialin'? | [
"spn (homo sapiens) (sialophorin (homo sapiens))",
"sialophorin (homo sapiens)"
] | [
"leukosialin-like (rattus norvegicus)",
"sp-ii (xenopus laevis) (integrin-binding sialoprotein l homeolog (xenopus laevis))",
"gp58 (homo sapiens)",
"ag3 (homo sapiens) (cd58 molecule (homo sapiens))",
"cd18 (homo sapiens)",
"gma (xenopus laevis) (myelin associated glycoprotein l homeolog (xenopus laevis)... | Given the context 'Because the antibody used was found to detect most efficiently the oligosaccharide products attached to leukosialin, the CHO cells were also stably transfected with leukosialin cDNA.', answer the user's query. |
What is the biomedical concept corresponding to 'core 2 beta-1,6-n-acetylglucosaminyltransferase'? | [
"c2glcnact (homo sapiens)"
] | [
"core-2/i-branching beta-1,6-n-acetylglucosaminyltransferase family protein (caenorhabditis elegans)",
"alpha-1,6-mannosyl-glycoprotein 2-beta-n-acetylglucosaminyltransferase (homo sapiens)",
"putative alpha-1,3-mannosyl-glycoprotein 2-beta-n-acetylglucosaminyltransferase (caenorhabditis elegans)",
"mannosyl ... | Given the context 'The expression of the presumed catalytic domain as a fusion protein with the IgG binding domain of protein A enabled us to demonstrate unequivocally that the cDNA encodes the core 2 beta-1,6-N-acetylglucosaminyltransferase, the enzyme responsible for the formation of Gal beta 1-3(GlcNAc beta 1-6)GalNAc structures.', answer the user's query. |
What is the biomedical concept corresponding to 'tumor necrosis factor-alpha'? | [
"tnfa (homo sapiens)",
"tumor necrosis factor (homo sapiens)",
"tnf (homo sapiens)",
"tnfsf2 (homo sapiens)"
] | [
"lymphotoxin alpha (homo sapiens)",
"tnf-alpha (xenopus laevis) (tumor necrosis factor s homeolog (xenopus laevis))",
"tnfc (homo sapiens)",
"tnfsf1 (homo sapiens)",
"tnf-alpha (drosophila melanogaster)",
"tnfa (xenopus laevis) (tumor necrosis factor s homeolog (xenopus laevis))",
"tnf-alpha (xenopus la... | Given the context 'Cloning of a novel tumor necrosis factor-alpha-inducible primary response gene that is differentially expressed in development and capillary tube-like formation in vitro.
TNF is a proinflammatory cytokine that has pleiotropic effects on cells and tissues, mediated in large part by alterations in target tissue gene expression.', answer the user's query. |
What is the biomedical concept corresponding to 'tnf'? | [
"tnf (homo sapiens)",
"tnfa (homo sapiens)",
"tumor necrosis factor (homo sapiens)",
"tnfsf2 (homo sapiens)"
] | [
"tnfsf1 (homo sapiens)",
"tnfb (homo sapiens)",
"tnfc (homo sapiens)",
"tnfa (xenopus laevis) (tumor necrosis factor s homeolog (xenopus laevis))",
"tnf-alpha (xenopus laevis) (tumor necrosis factor s homeolog (xenopus laevis))",
"tnfa (xenopus laevis) (tumor necrosis factor l homeolog (xenopus laevis))",... | Given the context 'Cloning of a novel tumor necrosis factor-alpha-inducible primary response gene that is differentially expressed in development and capillary tube-like formation in vitro.
TNF is a proinflammatory cytokine that has pleiotropic effects on cells and tissues, mediated in large part by alterations in target tissue gene expression.', answer the user's query. |
What is the biomedical concept corresponding to 'tnf'? | [
"tnf (homo sapiens)",
"tnfa (homo sapiens)",
"tumor necrosis factor (homo sapiens)",
"tnfsf2 (homo sapiens)"
] | [
"tnfsf1 (homo sapiens)",
"tnfb (homo sapiens)",
"tnfc (homo sapiens)",
"tnfa (xenopus laevis) (tumor necrosis factor s homeolog (xenopus laevis))",
"tnf-alpha (xenopus laevis) (tumor necrosis factor s homeolog (xenopus laevis))",
"tnfa (xenopus laevis) (tumor necrosis factor l homeolog (xenopus laevis))",... | Given the context 'We have used the technique of differential hybridization to identify several primary response genes induced by TNF in human umbilical vein endothelial (HUVE) cells, a cell type that is profoundly activated by cytokine treatment.', answer the user's query. |
What is the biomedical concept corresponding to 'b94'? | [
"b94 (homo sapiens)"
] | [
"b94 (drosophila melanogaster)",
"p94 (homo sapiens)",
"ly94 (homo sapiens)",
"cd94 (homo sapiens)",
"cd94-1 (bos taurus)",
"cd294 (homo sapiens)",
"b94 (mus musculus)",
"ly96 (homo sapiens)",
"cd94-2 (bos taurus)",
"b99 (homo sapiens)"
] | Given the context 'One of these cDNA, designated B94, detects a rapidly and transiently induced 4-kb transcript in TNF-treated HUVE cells, and this transcript is superinduced in the concomitant presence of cycloheximide.', answer the user's query. |
What is the biomedical concept corresponding to 'tnf'? | [
"tnf (homo sapiens)",
"tnfa (homo sapiens)",
"tumor necrosis factor (homo sapiens)",
"tnfsf2 (homo sapiens)"
] | [
"tnfsf1 (homo sapiens)",
"tnfb (homo sapiens)",
"tnfc (homo sapiens)",
"tnfa (xenopus laevis) (tumor necrosis factor s homeolog (xenopus laevis))",
"tnf-alpha (xenopus laevis) (tumor necrosis factor s homeolog (xenopus laevis))",
"tnfa (xenopus laevis) (tumor necrosis factor l homeolog (xenopus laevis))",... | Given the context 'One of these cDNA, designated B94, detects a rapidly and transiently induced 4-kb transcript in TNF-treated HUVE cells, and this transcript is superinduced in the concomitant presence of cycloheximide.', answer the user's query. |
What is the biomedical concept corresponding to 'il-1 beta'? | [
"interleukin 1 beta (homo sapiens)",
"il1-beta (homo sapiens)",
"il1beta (homo sapiens)",
"il1b (homo sapiens)",
"il-1 (homo sapiens)",
"il1f2 (homo sapiens)"
] | [
"interleukin 1 alpha (homo sapiens)",
"il-1h2 (homo sapiens)",
"il-1b (xenopus laevis) (interleukin 1 beta s homeolog (xenopus laevis))",
"il-1 alpha (homo sapiens)",
"il-1h (homo sapiens)",
"il-1b (xenopus laevis) (interleukin 1 beta l homeolog (xenopus laevis))",
"il-1h1 (homo sapiens)",
"interleuki... | Given the context 'Other proinflammatory stimuli including IL-1 beta and LPS are also able to induce B94 mRNA expression.', answer the user's query. |
What is the biomedical concept corresponding to 'b94'? | [
"b94 (homo sapiens)"
] | [
"b94 (drosophila melanogaster)",
"p94 (homo sapiens)",
"ly94 (homo sapiens)",
"cd94 (homo sapiens)",
"cd94-1 (bos taurus)",
"cd294 (homo sapiens)",
"b94 (mus musculus)",
"ly96 (homo sapiens)",
"cd94-2 (bos taurus)",
"b99 (homo sapiens)"
] | Given the context 'Other proinflammatory stimuli including IL-1 beta and LPS are also able to induce B94 mRNA expression.', answer the user's query. |
What is the biomedical concept corresponding to 'tnf'? | [
"tnf (homo sapiens)",
"tnfa (homo sapiens)",
"tumor necrosis factor (homo sapiens)",
"tnfsf2 (homo sapiens)"
] | [
"tnfsf1 (homo sapiens)",
"tnfb (homo sapiens)",
"tnfc (homo sapiens)",
"tnfa (xenopus laevis) (tumor necrosis factor s homeolog (xenopus laevis))",
"tnf-alpha (xenopus laevis) (tumor necrosis factor s homeolog (xenopus laevis))",
"tnfa (xenopus laevis) (tumor necrosis factor l homeolog (xenopus laevis))",... | Given the context 'Nuclear run-on experiments demonstrate that TNF induction of B94 transcript occurs primarily at the level of transcriptional activation.', answer the user's query. |
What is the biomedical concept corresponding to 'b94'? | [
"b94 (homo sapiens)"
] | [
"b94 (drosophila melanogaster)",
"p94 (homo sapiens)",
"ly94 (homo sapiens)",
"cd94 (homo sapiens)",
"cd94-1 (bos taurus)",
"cd294 (homo sapiens)",
"b94 (mus musculus)",
"ly96 (homo sapiens)",
"cd94-2 (bos taurus)",
"b99 (homo sapiens)"
] | Given the context 'Nuclear run-on experiments demonstrate that TNF induction of B94 transcript occurs primarily at the level of transcriptional activation.', answer the user's query. |
What is the biomedical concept corresponding to 'b94'? | [
"b94 (homo sapiens)"
] | [
"b94 (drosophila melanogaster)",
"p94 (homo sapiens)",
"ly94 (homo sapiens)",
"cd94 (homo sapiens)",
"cd94-1 (bos taurus)",
"cd294 (homo sapiens)",
"b94 (mus musculus)",
"ly96 (homo sapiens)",
"cd94-2 (bos taurus)",
"b99 (homo sapiens)"
] | Given the context 'Further, B94 is shown to be a single copy gene that is evolutionarily conserved.', answer the user's query. |
What is the biomedical concept corresponding to 'b94'? | [
"b94 (homo sapiens)"
] | [
"b94 (drosophila melanogaster)",
"p94 (homo sapiens)",
"ly94 (homo sapiens)",
"cd94 (homo sapiens)",
"cd94-1 (bos taurus)",
"cd294 (homo sapiens)",
"b94 (mus musculus)",
"ly96 (homo sapiens)",
"cd94-2 (bos taurus)",
"b99 (homo sapiens)"
] | Given the context 'Developmental regulation occurs most prominently in mouse embryonic liver and kidney, and a second smaller form of B94 transcript is detected in the placenta and testes.', answer the user's query. |
What is the biomedical concept corresponding to 'b94'? | [
"b94 (homo sapiens)"
] | [
"b94 (drosophila melanogaster)",
"p94 (homo sapiens)",
"ly94 (homo sapiens)",
"cd94 (homo sapiens)",
"cd94-1 (bos taurus)",
"cd294 (homo sapiens)",
"b94 (mus musculus)",
"ly96 (homo sapiens)",
"cd94-2 (bos taurus)",
"b99 (homo sapiens)"
] | Given the context 'B94 and other TNF-responsive transcripts are also induced during capillary tube formation suggesting overlap between genes induced by TNF and those induced during angiogenesis.', answer the user's query. |
What is the biomedical concept corresponding to 'tnf'? | [
"tnf (homo sapiens)",
"tnfa (homo sapiens)",
"tumor necrosis factor (homo sapiens)",
"tnfsf2 (homo sapiens)"
] | [
"tnfsf1 (homo sapiens)",
"tnfb (homo sapiens)",
"tnfc (homo sapiens)",
"tnfa (xenopus laevis) (tumor necrosis factor s homeolog (xenopus laevis))",
"tnf-alpha (xenopus laevis) (tumor necrosis factor s homeolog (xenopus laevis))",
"tnfa (xenopus laevis) (tumor necrosis factor l homeolog (xenopus laevis))",... | Given the context 'B94 and other TNF-responsive transcripts are also induced during capillary tube formation suggesting overlap between genes induced by TNF and those induced during angiogenesis.', answer the user's query. |
What is the biomedical concept corresponding to 'tnf'? | [
"tnf (homo sapiens)",
"tnfa (homo sapiens)",
"tumor necrosis factor (homo sapiens)",
"tnfsf2 (homo sapiens)"
] | [
"tnfsf1 (homo sapiens)",
"tnfb (homo sapiens)",
"tnfc (homo sapiens)",
"tnfa (xenopus laevis) (tumor necrosis factor s homeolog (xenopus laevis))",
"tnf-alpha (xenopus laevis) (tumor necrosis factor s homeolog (xenopus laevis))",
"tnfa (xenopus laevis) (tumor necrosis factor l homeolog (xenopus laevis))",... | Given the context 'B94 and other TNF-responsive transcripts are also induced during capillary tube formation suggesting overlap between genes induced by TNF and those induced during angiogenesis.', answer the user's query. |
What is the biomedical concept corresponding to 'b94'? | [
"b94 (homo sapiens)"
] | [
"b94 (drosophila melanogaster)",
"p94 (homo sapiens)",
"ly94 (homo sapiens)",
"cd94 (homo sapiens)",
"cd94-1 (bos taurus)",
"cd294 (homo sapiens)",
"b94 (mus musculus)",
"ly96 (homo sapiens)",
"cd94-2 (bos taurus)",
"b99 (homo sapiens)"
] | Given the context 'Sequence analysis of the B94 cDNA reveals an open reading frame encoding a 73-kDa polypeptide that has no homology to any known protein.', answer the user's query. |
What is the biomedical concept corresponding to 'b94'? | [
"b94 (homo sapiens)"
] | [
"b94 (drosophila melanogaster)",
"p94 (homo sapiens)",
"ly94 (homo sapiens)",
"cd94 (homo sapiens)",
"cd94-1 (bos taurus)",
"cd294 (homo sapiens)",
"b94 (mus musculus)",
"ly96 (homo sapiens)",
"cd94-2 (bos taurus)",
"b99 (homo sapiens)"
] | Given the context 'Polyclonal antisera directed against the carboxyl-terminal portion of the B94 protein immunoprecipitates a protein of the predicted molecular mass both from COS cells transfected with a B94 expression vector and from TNF-treated HUVE cells.', answer the user's query. |
What is the biomedical concept corresponding to 'b94'? | [
"b94 (homo sapiens)"
] | [
"b94 (drosophila melanogaster)",
"p94 (homo sapiens)",
"ly94 (homo sapiens)",
"cd94 (homo sapiens)",
"cd94-1 (bos taurus)",
"cd294 (homo sapiens)",
"b94 (mus musculus)",
"ly96 (homo sapiens)",
"cd94-2 (bos taurus)",
"b99 (homo sapiens)"
] | Given the context 'Polyclonal antisera directed against the carboxyl-terminal portion of the B94 protein immunoprecipitates a protein of the predicted molecular mass both from COS cells transfected with a B94 expression vector and from TNF-treated HUVE cells.', answer the user's query. |
What is the biomedical concept corresponding to 'tnf'? | [
"tnf (homo sapiens)",
"tnfa (homo sapiens)",
"tumor necrosis factor (homo sapiens)",
"tnfsf2 (homo sapiens)"
] | [
"tnfsf1 (homo sapiens)",
"tnfb (homo sapiens)",
"tnfc (homo sapiens)",
"tnfa (xenopus laevis) (tumor necrosis factor s homeolog (xenopus laevis))",
"tnf-alpha (xenopus laevis) (tumor necrosis factor s homeolog (xenopus laevis))",
"tnfa (xenopus laevis) (tumor necrosis factor l homeolog (xenopus laevis))",... | Given the context 'Polyclonal antisera directed against the carboxyl-terminal portion of the B94 protein immunoprecipitates a protein of the predicted molecular mass both from COS cells transfected with a B94 expression vector and from TNF-treated HUVE cells.', answer the user's query. |
What is the biomedical concept corresponding to 'rage'? | [
"rage (homo sapiens) (advanced glycosylation end-product specific receptor (homo sapiens))",
"advanced glycosylation end-product specific receptor (homo sapiens)",
"srage (homo sapiens)"
] | [
"rage-1 (homo sapiens)",
"rage1 (homo sapiens)",
"ragef (homo sapiens)",
"rage (mus musculus) (advanced glycosylation end product-specific receptor (mus musculus))",
"rage (bos taurus) (advanced glycosylation end-product specific receptor (bos taurus))",
"rage (rattus norvegicus) (advanced glycosylation e... | Given the context 'A approximately 35-kDa polypeptide with a unique NH2-terminal sequence has been isolated from bovine lung and found to be present on the surface of endothelial cells where it mediates the binding of AGEs (receptor for advanced glycosylation end product or RAGE).', answer the user's query. |
What is the biomedical concept corresponding to 'rage'? | [
"rage (homo sapiens) (advanced glycosylation end-product specific receptor (homo sapiens))",
"advanced glycosylation end-product specific receptor (homo sapiens)",
"srage (homo sapiens)"
] | [
"rage-1 (homo sapiens)",
"rage1 (homo sapiens)",
"ragef (homo sapiens)",
"rage (mus musculus) (advanced glycosylation end product-specific receptor (mus musculus))",
"rage (bos taurus) (advanced glycosylation end-product specific receptor (bos taurus))",
"rage (rattus norvegicus) (advanced glycosylation e... | Given the context 'Using an oligonucleotide probe based on the amino-terminal sequence of RAGE, an apparently full-length cDNA of 1.5 kilobases was isolated from a bovine lung cDNA library.', answer the user's query. |
What is the biomedical concept corresponding to 'rage'? | [
"rage (homo sapiens) (advanced glycosylation end-product specific receptor (homo sapiens))",
"advanced glycosylation end-product specific receptor (homo sapiens)",
"srage (homo sapiens)"
] | [
"rage-1 (homo sapiens)",
"rage1 (homo sapiens)",
"ragef (homo sapiens)",
"rage (mus musculus) (advanced glycosylation end product-specific receptor (mus musculus))",
"rage (bos taurus) (advanced glycosylation end-product specific receptor (bos taurus))",
"rage (rattus norvegicus) (advanced glycosylation e... | Given the context 'A partial clone encoding the human counterpart of RAGE, isolated from a human lung library, was found to be approximately 90% homologous to the bovine molecule.', answer the user's query. |
What is the biomedical concept corresponding to 'rage'? | [
"rage (homo sapiens) (advanced glycosylation end-product specific receptor (homo sapiens))",
"advanced glycosylation end-product specific receptor (homo sapiens)",
"srage (homo sapiens)"
] | [
"rage-1 (homo sapiens)",
"rage1 (homo sapiens)",
"ragef (homo sapiens)",
"rage (mus musculus) (advanced glycosylation end product-specific receptor (mus musculus))",
"rage (bos taurus) (advanced glycosylation end-product specific receptor (bos taurus))",
"rage (rattus norvegicus) (advanced glycosylation e... | Given the context 'Based on computer analysis of the amino acid sequence of RAGE and comparison with databases, RAGE is a new member of the immunoglobulin superfamily of cell surface molecules and shares significant homology with MUC 18, NCAM, and the cytoplasmic domain of CD20.', answer the user's query. |
What is the biomedical concept corresponding to 'rage'? | [
"rage (homo sapiens) (advanced glycosylation end-product specific receptor (homo sapiens))",
"advanced glycosylation end-product specific receptor (homo sapiens)",
"srage (homo sapiens)"
] | [
"rage-1 (homo sapiens)",
"rage1 (homo sapiens)",
"ragef (homo sapiens)",
"rage (mus musculus) (advanced glycosylation end product-specific receptor (mus musculus))",
"rage (bos taurus) (advanced glycosylation end-product specific receptor (bos taurus))",
"rage (rattus norvegicus) (advanced glycosylation e... | Given the context 'Based on computer analysis of the amino acid sequence of RAGE and comparison with databases, RAGE is a new member of the immunoglobulin superfamily of cell surface molecules and shares significant homology with MUC 18, NCAM, and the cytoplasmic domain of CD20.', answer the user's query. |
What is the biomedical concept corresponding to 'muc 18'? | [
"muc18 (homo sapiens)"
] | [
"muc-17 (homo sapiens)",
"muc-15 (homo sapiens)",
"muc-13 (homo sapiens)",
"muc-12 (homo sapiens)",
"muc-19 (homo sapiens)",
"muc-20 (homo sapiens)",
"mucin-18 (gallus gallus)",
"muc8 (homo sapiens)",
"muc-21 (homo sapiens)",
"muc-24 (homo sapiens)"
] | Given the context 'Based on computer analysis of the amino acid sequence of RAGE and comparison with databases, RAGE is a new member of the immunoglobulin superfamily of cell surface molecules and shares significant homology with MUC 18, NCAM, and the cytoplasmic domain of CD20.', answer the user's query. |
What is the biomedical concept corresponding to 'ncam'? | [
"ncam (homo sapiens)",
"ncam1 (homo sapiens)"
] | [
"ncam (neural cell adhesion molecule) homolog (caenorhabditis elegans)",
"ncam-l1 (homo sapiens)",
"ncam-1 (mus musculus)",
"ncam-1 (caenorhabditis elegans)",
"ncam (xenopus laevis) (neural cell adhesion molecule 1 s homeolog (xenopus laevis))",
"ncam-2 (mus musculus)",
"ncam-l1 (mus musculus)",
"ncam... | Given the context 'Based on computer analysis of the amino acid sequence of RAGE and comparison with databases, RAGE is a new member of the immunoglobulin superfamily of cell surface molecules and shares significant homology with MUC 18, NCAM, and the cytoplasmic domain of CD20.', answer the user's query. |
What is the biomedical concept corresponding to 'cd20'? | [
"cd20 (homo sapiens) (membrane spanning 4-domains a1 (homo sapiens))"
] | [
"cd20l (homo sapiens)",
"cd20-l2 (homo sapiens)",
"cd20-l1 (homo sapiens)",
"cd20 (homo sapiens) (keratin 20 (homo sapiens))",
"cd20 (mus musculus)",
"cd20 (bos taurus)",
"cd20l1 (homo sapiens)",
"cd20l2 (homo sapiens)",
"cd20r (mus musculus)",
"cd20l3 (homo sapiens)"
] | Given the context 'Based on computer analysis of the amino acid sequence of RAGE and comparison with databases, RAGE is a new member of the immunoglobulin superfamily of cell surface molecules and shares significant homology with MUC 18, NCAM, and the cytoplasmic domain of CD20.', answer the user's query. |
What is the biomedical concept corresponding to 'rage'? | [
"rage (homo sapiens) (advanced glycosylation end-product specific receptor (homo sapiens))",
"advanced glycosylation end-product specific receptor (homo sapiens)",
"srage (homo sapiens)"
] | [
"rage-1 (homo sapiens)",
"rage1 (homo sapiens)",
"ragef (homo sapiens)",
"rage (mus musculus) (advanced glycosylation end product-specific receptor (mus musculus))",
"rage (bos taurus) (advanced glycosylation end-product specific receptor (bos taurus))",
"rage (rattus norvegicus) (advanced glycosylation e... | Given the context 'Expression of the RAGE cDNA in 293 cells allowed them to bind 125I-AGE-albumin in a saturable and dose-dependent manner (Kd approximately 100 nM), blocked by antibody to RAGE.', answer the user's query. |
What is the biomedical concept corresponding to 'rage'? | [
"rage (homo sapiens) (advanced glycosylation end-product specific receptor (homo sapiens))",
"advanced glycosylation end-product specific receptor (homo sapiens)",
"srage (homo sapiens)"
] | [
"rage-1 (homo sapiens)",
"rage1 (homo sapiens)",
"ragef (homo sapiens)",
"rage (mus musculus) (advanced glycosylation end product-specific receptor (mus musculus))",
"rage (bos taurus) (advanced glycosylation end-product specific receptor (bos taurus))",
"rage (rattus norvegicus) (advanced glycosylation e... | Given the context 'Expression of the RAGE cDNA in 293 cells allowed them to bind 125I-AGE-albumin in a saturable and dose-dependent manner (Kd approximately 100 nM), blocked by antibody to RAGE.', answer the user's query. |
What is the biomedical concept corresponding to 'rage'? | [
"rage (homo sapiens) (advanced glycosylation end-product specific receptor (homo sapiens))",
"advanced glycosylation end-product specific receptor (homo sapiens)",
"srage (homo sapiens)"
] | [
"rage-1 (homo sapiens)",
"rage1 (homo sapiens)",
"ragef (homo sapiens)",
"rage (mus musculus) (advanced glycosylation end product-specific receptor (mus musculus))",
"rage (bos taurus) (advanced glycosylation end-product specific receptor (bos taurus))",
"rage (rattus norvegicus) (advanced glycosylation e... | Given the context 'Western blots of 293 cells transfected with RAGE cDNA probed with anti-RAGE IgG demonstrated expression of immunoreactive protein compared to its absence in mock-transfected cells.', answer the user's query. |
What is the biomedical concept corresponding to 'rage'? | [
"rage (homo sapiens) (advanced glycosylation end-product specific receptor (homo sapiens))",
"advanced glycosylation end-product specific receptor (homo sapiens)",
"srage (homo sapiens)"
] | [
"rage-1 (homo sapiens)",
"rage1 (homo sapiens)",
"ragef (homo sapiens)",
"rage (mus musculus) (advanced glycosylation end product-specific receptor (mus musculus))",
"rage (bos taurus) (advanced glycosylation end-product specific receptor (bos taurus))",
"rage (rattus norvegicus) (advanced glycosylation e... | Given the context 'Western blots of 293 cells transfected with RAGE cDNA probed with anti-RAGE IgG demonstrated expression of immunoreactive protein compared to its absence in mock-transfected cells.', answer the user's query. |
What is the biomedical concept corresponding to 'rage'? | [
"rage (homo sapiens) (advanced glycosylation end-product specific receptor (homo sapiens))",
"advanced glycosylation end-product specific receptor (homo sapiens)",
"srage (homo sapiens)"
] | [
"rage-1 (homo sapiens)",
"rage1 (homo sapiens)",
"ragef (homo sapiens)",
"rage (mus musculus) (advanced glycosylation end product-specific receptor (mus musculus))",
"rage (bos taurus) (advanced glycosylation end-product specific receptor (bos taurus))",
"rage (rattus norvegicus) (advanced glycosylation e... | Given the context 'These results suggest that RAGE functions as a cell surface receptor for AGEs, which could potentially mediate cellular effects of this class of glycosylated proteins.', answer the user's query. |
What is the biomedical concept corresponding to 'cd59'? | [
"cd59 (homo sapiens)",
"cd59 molecule (cd59 blood group) (homo sapiens)"
] | [
"cd51 (homo sapiens)",
"cd52 (homo sapiens)",
"cd58 (homo sapiens)",
"cd52 molecule (homo sapiens)",
"cd55 (homo sapiens)",
"cd54 (homo sapiens)",
"cd57 (homo sapiens)",
"cd58 molecule (homo sapiens)",
"cd5 (homo sapiens)",
"cd53 (homo sapiens)"
] | Given the context 'Structure of the CD59-encoding gene: further evidence of a relationship to murine lymphocyte antigen Ly-6 protein.
', answer the user's query. |
What is the biomedical concept corresponding to 'ly-6'? | [
"ly-6 (mus musculus)"
] | [
"ly-6k (homo sapiens)",
"ly-6d (homo sapiens)",
"ly-6i (mus musculus)",
"ly-6a/e (mus musculus)",
"lyb-6 (mus musculus)",
"ly5 (homo sapiens)",
"ly-3 (homo sapiens)",
"ly-96 (homo sapiens)",
"ly86 (homo sapiens)",
"ly-6g (mus musculus)"
] | Given the context 'Structure of the CD59-encoding gene: further evidence of a relationship to murine lymphocyte antigen Ly-6 protein.
', answer the user's query. |
What is the biomedical concept corresponding to 'cd59'? | [
"cd59 (homo sapiens)",
"cd59 molecule (cd59 blood group) (homo sapiens)"
] | [
"cd51 (homo sapiens)",
"cd52 (homo sapiens)",
"cd58 (homo sapiens)",
"cd52 molecule (homo sapiens)",
"cd55 (homo sapiens)",
"cd54 (homo sapiens)",
"cd57 (homo sapiens)",
"cd58 molecule (homo sapiens)",
"cd5 (homo sapiens)",
"cd53 (homo sapiens)"
] | Given the context 'The gene for CD59 [membrane inhibitor of reactive lysis (MIRL), protectin], a phosphatidylinositol-linked surface glycoprotein that regulates the formation of the polymeric C9 complex of complement and that is deficient on the abnormal hematopoietic cells of patients with paroxysmal nocturnal hemoglobinuria, consists of four exons spanning 20 kilobases.', answer the user's query. |
What is the biomedical concept corresponding to 'membrane inhibitor of reactive lysis'? | [
"cd59 (homo sapiens)",
"cd59 molecule (cd59 blood group) (homo sapiens)"
] | [
"cd5l (homo sapiens)",
"cd52 molecule (homo sapiens)",
"cd58 (homo sapiens)",
"cd52 (homo sapiens)",
"cd58 molecule (homo sapiens)",
"bmp and activin membrane bound inhibitor (homo sapiens)",
"antizyme inhibitor 2 (mus musculus)",
"cd5 (homo sapiens)",
"aim (homo sapiens) (cd5 molecule like (homo sa... | Given the context 'The gene for CD59 [membrane inhibitor of reactive lysis (MIRL), protectin], a phosphatidylinositol-linked surface glycoprotein that regulates the formation of the polymeric C9 complex of complement and that is deficient on the abnormal hematopoietic cells of patients with paroxysmal nocturnal hemoglobinuria, consists of four exons spanning 20 kilobases.', answer the user's query. |
What is the biomedical concept corresponding to 'mirl'? | [
"mirl (homo sapiens)"
] | [
"mira (drosophila melanogaster)",
"mir (drosophila melanogaster) (miranda (drosophila melanogaster))",
"mire (homo sapiens)",
"mirk (homo sapiens)",
"miras (homo sapiens)",
"miro-1 (caenorhabditis elegans)",
"miro1 (homo sapiens)",
"miro-2 (caenorhabditis elegans)",
"mir1 (drosophila melanogaster)",... | Given the context 'The gene for CD59 [membrane inhibitor of reactive lysis (MIRL), protectin], a phosphatidylinositol-linked surface glycoprotein that regulates the formation of the polymeric C9 complex of complement and that is deficient on the abnormal hematopoietic cells of patients with paroxysmal nocturnal hemoglobinuria, consists of four exons spanning 20 kilobases.', answer the user's query. |
What is the biomedical concept corresponding to 'cd59'? | [
"cd59 (homo sapiens)",
"cd59 molecule (cd59 blood group) (homo sapiens)"
] | [
"cd51 (homo sapiens)",
"cd52 (homo sapiens)",
"cd58 (homo sapiens)",
"cd52 molecule (homo sapiens)",
"cd55 (homo sapiens)",
"cd54 (homo sapiens)",
"cd57 (homo sapiens)",
"cd58 molecule (homo sapiens)",
"cd5 (homo sapiens)",
"cd53 (homo sapiens)"
] | Given the context 'The structure of the CD59 gene is very similar to that encoding Ly-6, a murine glycoprotein with which CD59 has some structural similarity.', answer the user's query. |
What is the biomedical concept corresponding to 'ly-6'? | [
"ly-6 (mus musculus)"
] | [
"ly-6k (homo sapiens)",
"ly-6d (homo sapiens)",
"ly-6i (mus musculus)",
"ly-6a/e (mus musculus)",
"lyb-6 (mus musculus)",
"ly5 (homo sapiens)",
"ly-3 (homo sapiens)",
"ly-96 (homo sapiens)",
"ly86 (homo sapiens)",
"ly-6g (mus musculus)"
] | Given the context 'The structure of the CD59 gene is very similar to that encoding Ly-6, a murine glycoprotein with which CD59 has some structural similarity.', answer the user's query. |
What is the biomedical concept corresponding to 'cd59'? | [
"cd59 (homo sapiens)",
"cd59 molecule (cd59 blood group) (homo sapiens)"
] | [
"cd51 (homo sapiens)",
"cd52 (homo sapiens)",
"cd58 (homo sapiens)",
"cd52 molecule (homo sapiens)",
"cd55 (homo sapiens)",
"cd54 (homo sapiens)",
"cd57 (homo sapiens)",
"cd58 molecule (homo sapiens)",
"cd5 (homo sapiens)",
"cd53 (homo sapiens)"
] | Given the context 'The structure of the CD59 gene is very similar to that encoding Ly-6, a murine glycoprotein with which CD59 has some structural similarity.', answer the user's query. |
What is the biomedical concept corresponding to 'urokinase plasminogen-activator receptor'? | [
"plasminogen activator, urokinase receptor (homo sapiens)",
"upar (homo sapiens)"
] | [
"plasminogen activator, urokinase receptor (mus musculus)",
"plasminogen activator, urokinase receptor (sus scrofa)",
"plasminogen activator, urokinase receptor (rattus norvegicus)",
"urokinase plasminogen activator surface receptor (danio rerio) (loc100535423 (danio rerio))",
"urokinase plasminogen activat... | Given the context 'The striking similarity in gene structure is further evidence that the two proteins belong to a superfamily of proteins that may also include the urokinase plasminogen-activator receptor and a squid glycoprotein of unknown function.', answer the user's query. |
What is the biomedical concept corresponding to 'interleukin-1 receptor antagonist'? | [
"interleukin 1 receptor antagonist (homo sapiens)",
"il1ra (homo sapiens) (interleukin 1 receptor antagonist (homo sapiens))",
"il-1ra (homo sapiens) (interleukin 1 receptor antagonist (homo sapiens))",
"irap (homo sapiens) (interleukin 1 receptor antagonist (homo sapiens))",
"il-1rn (homo sapiens)",
"il1... | [
"interleukin 1 receptor antagonist (mus musculus)",
"interleukin 1 receptor antagonist (rattus norvegicus)",
"interleukin 1 receptor antagonist (gallus gallus)",
"interleukin 1 receptor antagonist (bos taurus)",
"interleukin 1 receptor antagonist (sus scrofa)",
"interleukin 1 receptor antagonist (oryctola... | Given the context 'Cloning and chromosome mapping of the human interleukin-1 receptor antagonist gene.
', answer the user's query. |
What is the biomedical concept corresponding to 'interleukin-1 receptor antagonist'? | [
"interleukin 1 receptor antagonist (homo sapiens)",
"il1ra (homo sapiens) (interleukin 1 receptor antagonist (homo sapiens))",
"il-1ra (homo sapiens) (interleukin 1 receptor antagonist (homo sapiens))",
"irap (homo sapiens) (interleukin 1 receptor antagonist (homo sapiens))",
"il-1rn (homo sapiens)",
"il1... | [
"interleukin 1 receptor antagonist (mus musculus)",
"interleukin 1 receptor antagonist (rattus norvegicus)",
"interleukin 1 receptor antagonist (gallus gallus)",
"interleukin 1 receptor antagonist (bos taurus)",
"interleukin 1 receptor antagonist (sus scrofa)",
"interleukin 1 receptor antagonist (oryctola... | Given the context 'By screening a human genomic library with an interleukin-1 receptor antagonist (IL-1ra) cDNA probe, we have isolated a 15 kb clone which contains the entire coding region of the gene as expressed in monocytes, and includes 6 kb of 5'-upstream sequence.', answer the user's query. |
What is the biomedical concept corresponding to 'il-1ra'? | [
"il-1ra (homo sapiens) (interleukin 1 receptor antagonist (homo sapiens))",
"il-1ra3 (homo sapiens)",
"il1ra (homo sapiens) (interleukin 1 receptor antagonist (homo sapiens))",
"interleukin 1 receptor antagonist (homo sapiens)",
"irap (homo sapiens) (interleukin 1 receptor antagonist (homo sapiens))",
"ic... | [
"il-1racp (homo sapiens)",
"il-1rapl-1 (homo sapiens)",
"il-1ra (homo sapiens) (interleukin 6 receptor (homo sapiens))",
"il-1ra (mus musculus)",
"il-1racpl (homo sapiens)",
"il-1racpip (homo sapiens)",
"il1rap (homo sapiens)",
"il-1ra (rattus norvegicus)",
"il-1racp (mus musculus)",
"il-1rrp (hom... | Given the context 'By screening a human genomic library with an interleukin-1 receptor antagonist (IL-1ra) cDNA probe, we have isolated a 15 kb clone which contains the entire coding region of the gene as expressed in monocytes, and includes 6 kb of 5'-upstream sequence.', answer the user's query. |
What is the biomedical concept corresponding to 'il-1ra'? | [
"il-1ra (homo sapiens) (interleukin 1 receptor antagonist (homo sapiens))",
"il-1ra3 (homo sapiens)",
"il1ra (homo sapiens) (interleukin 1 receptor antagonist (homo sapiens))",
"interleukin 1 receptor antagonist (homo sapiens)",
"irap (homo sapiens) (interleukin 1 receptor antagonist (homo sapiens))",
"ic... | [
"il-1racp (homo sapiens)",
"il-1rapl-1 (homo sapiens)",
"il-1ra (homo sapiens) (interleukin 6 receptor (homo sapiens))",
"il-1ra (mus musculus)",
"il-1racpl (homo sapiens)",
"il-1racpip (homo sapiens)",
"il1rap (homo sapiens)",
"il-1ra (rattus norvegicus)",
"il-1racp (mus musculus)",
"il-1rrp (hom... | Given the context 'The gene contains four exons which code for the secreted form of the IL-1ra, however, our clone does not contain the alternative first exon used to generate an intracellular form of the protein as the protein as found in epithelial cells.', answer the user's query. |
What is the biomedical concept corresponding to 'il-1ra'? | [
"il-1ra (homo sapiens) (interleukin 1 receptor antagonist (homo sapiens))",
"il-1ra3 (homo sapiens)",
"il1ra (homo sapiens) (interleukin 1 receptor antagonist (homo sapiens))",
"interleukin 1 receptor antagonist (homo sapiens)",
"irap (homo sapiens) (interleukin 1 receptor antagonist (homo sapiens))",
"ic... | [
"il-1racp (homo sapiens)",
"il-1rapl-1 (homo sapiens)",
"il-1ra (homo sapiens) (interleukin 6 receptor (homo sapiens))",
"il-1ra (mus musculus)",
"il-1racpl (homo sapiens)",
"il-1racpip (homo sapiens)",
"il1rap (homo sapiens)",
"il-1ra (rattus norvegicus)",
"il-1racp (mus musculus)",
"il-1rrp (hom... | Given the context 'By in-situ fluorescence hybridization we have shown that the IL-1ra gene is found on the long arm of chromosome 2 and maps to 2q13-14.1.', answer the user's query. |
What is the biomedical concept corresponding to 'il-1 alpha'? | [
"il-1 alpha (homo sapiens)",
"interleukin 1 alpha (homo sapiens)",
"il-1a (homo sapiens)",
"il1-alpha (homo sapiens)",
"il1a (homo sapiens)",
"il1f1 (homo sapiens)",
"il1 (homo sapiens)"
] | [
"il-1 (homo sapiens)",
"il-1h (homo sapiens)",
"il-1h1 (homo sapiens)",
"il1l1 (homo sapiens)",
"interleukin 1 beta (homo sapiens)",
"il1-eta (homo sapiens)",
"interferon alpha 1 (homo sapiens)",
"il-1g (homo sapiens)",
"il-1 (drosophila melanogaster)",
"interleukin 1 alpha (mus musculus)"
] | Given the context 'Previous studies have revealed that IL-1 alpha, and IL-1 beta and both type I and type II forms of the IL-1 receptor all map close to this region of chromosome 2.', answer the user's query. |
What is the biomedical concept corresponding to 'il-1 beta'? | [
"interleukin 1 beta (homo sapiens)",
"il1-beta (homo sapiens)",
"il1beta (homo sapiens)",
"il1b (homo sapiens)",
"il-1 (homo sapiens)",
"il1f2 (homo sapiens)"
] | [
"interleukin 1 alpha (homo sapiens)",
"il-1h2 (homo sapiens)",
"il-1b (xenopus laevis) (interleukin 1 beta s homeolog (xenopus laevis))",
"il-1 alpha (homo sapiens)",
"il-1h (homo sapiens)",
"il-1b (xenopus laevis) (interleukin 1 beta l homeolog (xenopus laevis))",
"il-1h1 (homo sapiens)",
"interleuki... | Given the context 'Previous studies have revealed that IL-1 alpha, and IL-1 beta and both type I and type II forms of the IL-1 receptor all map close to this region of chromosome 2.', answer the user's query. |
What is the biomedical concept corresponding to 'aprataxin'? | [
"aprataxin (homo sapiens)"
] | [
"aprataxin (drosophila melanogaster)",
"aprataxin (xenopus tropicalis)",
"aprataxin-like (xenopus laevis)",
"aprataxin (mus musculus)",
"aprataxin l homeolog (xenopus laevis)",
"aprataxin-like (arabidopsis thaliana)",
"aprataxin (sus scrofa)",
"aprataxin (danio rerio)",
"aprataxin-like protein (arab... | Given the context 'Aprataxin, the causative protein for EAOH is a nuclear protein with a potential role as a DNA repair protein.
Early-onset ataxia with ocular motor apraxia and hypoalbuminemia (EAOH) is an autosomal recessive neurodegenerative disorder characterized by early-onset ataxia, ocular motor apraxia, and hypoalbuminemia.', answer the user's query. |
What is the biomedical concept corresponding to 'eaoh'? | [
"eaoh (homo sapiens)"
] | [
"oohe (homo sapiens)",
"eay (drosophila melanogaster) (early (drosophila melanogaster))",
"ead (homo sapiens)",
"egl (drosophila melanogaster) (eagle (drosophila melanogaster))",
"eaa1 (homo sapiens)",
"hae1 (homo sapiens)",
"eaf (drosophila melanogaster)",
"hydroxyacid oxidase (drosophila melanogaste... | Given the context 'Aprataxin, the causative protein for EAOH is a nuclear protein with a potential role as a DNA repair protein.
Early-onset ataxia with ocular motor apraxia and hypoalbuminemia (EAOH) is an autosomal recessive neurodegenerative disorder characterized by early-onset ataxia, ocular motor apraxia, and hypoalbuminemia.', answer the user's query. |
What is the biomedical concept corresponding to 'eaoh'? | [
"eaoh (homo sapiens)"
] | [
"oohe (homo sapiens)",
"eay (drosophila melanogaster) (early (drosophila melanogaster))",
"ead (homo sapiens)",
"egl (drosophila melanogaster) (eagle (drosophila melanogaster))",
"eaa1 (homo sapiens)",
"hae1 (homo sapiens)",
"eaf (drosophila melanogaster)",
"hydroxyacid oxidase (drosophila melanogaste... | Given the context 'Aprataxin, the causative protein for EAOH is a nuclear protein with a potential role as a DNA repair protein.
Early-onset ataxia with ocular motor apraxia and hypoalbuminemia (EAOH) is an autosomal recessive neurodegenerative disorder characterized by early-onset ataxia, ocular motor apraxia, and hypoalbuminemia.', answer the user's query. |
What is the biomedical concept corresponding to 'eaoh'? | [
"eaoh (homo sapiens)"
] | [
"oohe (homo sapiens)",
"eay (drosophila melanogaster) (early (drosophila melanogaster))",
"ead (homo sapiens)",
"egl (drosophila melanogaster) (eagle (drosophila melanogaster))",
"eaa1 (homo sapiens)",
"hae1 (homo sapiens)",
"eaf (drosophila melanogaster)",
"hydroxyacid oxidase (drosophila melanogaste... | Given the context 'Recently, the causative gene for EAOH, APTX, has been identified.', answer the user's query. |
What is the biomedical concept corresponding to 'aptx'? | [
"aptx (homo sapiens)"
] | [
"aptx (drosophila melanogaster)",
"aptl (homo sapiens)",
"apt1 (drosophila melanogaster)",
"apt5h (homo sapiens)",
"aptx7 (drosophila melanogaster)",
"aptr (homo sapiens)",
"apt1 (xenopus laevis) (fas cell surface death receptor s homeolog (xenopus laevis))",
"apt-1 (homo sapiens)",
"aptx (arabidops... | Given the context 'Recently, the causative gene for EAOH, APTX, has been identified.', answer the user's query. |
What is the biomedical concept corresponding to 'aptx'? | [
"aptx (homo sapiens)"
] | [
"aptx (drosophila melanogaster)",
"aptl (homo sapiens)",
"apt1 (drosophila melanogaster)",
"apt5h (homo sapiens)",
"aptx7 (drosophila melanogaster)",
"aptr (homo sapiens)",
"apt1 (xenopus laevis) (fas cell surface death receptor s homeolog (xenopus laevis))",
"apt-1 (homo sapiens)",
"aptx (arabidops... | Given the context 'Of the two splicing variants of APTX mRNA, the short and the long forms, long-form APTX mRNA was found to be the major isoform.', answer the user's query. |
What is the biomedical concept corresponding to 'aptx'? | [
"aptx (homo sapiens)"
] | [
"aptx (drosophila melanogaster)",
"aptl (homo sapiens)",
"apt1 (drosophila melanogaster)",
"apt5h (homo sapiens)",
"aptx7 (drosophila melanogaster)",
"aptr (homo sapiens)",
"apt1 (xenopus laevis) (fas cell surface death receptor s homeolog (xenopus laevis))",
"apt-1 (homo sapiens)",
"aptx (arabidops... | Given the context 'Of the two splicing variants of APTX mRNA, the short and the long forms, long-form APTX mRNA was found to be the major isoform.', answer the user's query. |
What is the biomedical concept corresponding to 'aprataxin'? | [
"aprataxin (homo sapiens)"
] | [
"aprataxin (drosophila melanogaster)",
"aprataxin (xenopus tropicalis)",
"aprataxin-like (xenopus laevis)",
"aprataxin (mus musculus)",
"aprataxin l homeolog (xenopus laevis)",
"aprataxin-like (arabidopsis thaliana)",
"aprataxin (sus scrofa)",
"aprataxin (danio rerio)",
"aprataxin-like protein (arab... | Given the context 'Aprataxin is mainly located in the nucleus, and, furthermore, the first nuclear localization signal located near the amino terminus of the long-form aprataxin is essential for its nuclear localization.', answer the user's query. |
What is the biomedical concept corresponding to 'aprataxin'? | [
"aprataxin (homo sapiens)"
] | [
"aprataxin (drosophila melanogaster)",
"aprataxin (xenopus tropicalis)",
"aprataxin-like (xenopus laevis)",
"aprataxin (mus musculus)",
"aprataxin l homeolog (xenopus laevis)",
"aprataxin-like (arabidopsis thaliana)",
"aprataxin (sus scrofa)",
"aprataxin (danio rerio)",
"aprataxin-like protein (arab... | Given the context 'Aprataxin is mainly located in the nucleus, and, furthermore, the first nuclear localization signal located near the amino terminus of the long-form aprataxin is essential for its nuclear localization.', answer the user's query. |
What is the biomedical concept corresponding to 'aprataxin'? | [
"aprataxin (homo sapiens)"
] | [
"aprataxin (drosophila melanogaster)",
"aprataxin (xenopus tropicalis)",
"aprataxin-like (xenopus laevis)",
"aprataxin (mus musculus)",
"aprataxin l homeolog (xenopus laevis)",
"aprataxin-like (arabidopsis thaliana)",
"aprataxin (sus scrofa)",
"aprataxin (danio rerio)",
"aprataxin-like protein (arab... | Given the context 'We found, based on the yeast two-hybrid and coimmunoprecipitation experiments, that the long-form but not the short-form aprataxin interacts with XRCC1 (x-ray repair cross-complementing group 1).', answer the user's query. |
What is the biomedical concept corresponding to 'xrcc1'? | [
"xrcc1 (homo sapiens)",
"x-ray repair cross complementing 1 (homo sapiens)"
] | [
"xrcc1 (xenopus tropicalis) (x-ray repair complementing defective repair in chinese hamster cells 1 (xenopus tropicalis))",
"xrcc1 (xenopus tropicalis) (regulator of chromosome condensation 1 (xenopus tropicalis))",
"xrcc1 (xenopus laevis) (regulator of chromosome condensation 1 s homeolog (xenopus laevis))",
... | Given the context 'We found, based on the yeast two-hybrid and coimmunoprecipitation experiments, that the long-form but not the short-form aprataxin interacts with XRCC1 (x-ray repair cross-complementing group 1).', answer the user's query. |
What is the biomedical concept corresponding to 'x-ray repair cross-complementing group 1'? | [
"x-ray repair cross complementing 1 (homo sapiens)",
"rcc (homo sapiens) (x-ray repair cross complementing 1 (homo sapiens))",
"xrcc1 (homo sapiens)"
] | [
"x-ray repair cross complementing 3 (homo sapiens)",
"x-ray repair cross complementing 5 (homo sapiens)",
"x-ray repair cross complementing 2 (homo sapiens)",
"x-ray repair cross complementing 4 (homo sapiens)",
"homolog of x-ray repair cross complementing 1 (arabidopsis thaliana)",
"x-ray repair compleme... | Given the context 'We found, based on the yeast two-hybrid and coimmunoprecipitation experiments, that the long-form but not the short-form aprataxin interacts with XRCC1 (x-ray repair cross-complementing group 1).', answer the user's query. |
What is the biomedical concept corresponding to 'aprataxin'? | [
"aprataxin (homo sapiens)"
] | [
"aprataxin (drosophila melanogaster)",
"aprataxin (xenopus tropicalis)",
"aprataxin-like (xenopus laevis)",
"aprataxin (mus musculus)",
"aprataxin l homeolog (xenopus laevis)",
"aprataxin-like (arabidopsis thaliana)",
"aprataxin (sus scrofa)",
"aprataxin (danio rerio)",
"aprataxin-like protein (arab... | Given the context 'Interestingly the amino terminus of the long-form aprataxin is homologous with polynucleotidekinase-3'-phosphatase, which has been demonstrated to be involved in base excision repair, a subtype of single-strand DNA break repair, through interaction with XRCC1, DNA polymerase beta, and DNA ligase III.', answer the user's query. |
What is the biomedical concept corresponding to 'polynucleotidekinase-3'-phosphatase'? | [
"polynucleotide kinase 3'-phosphatase (homo sapiens)",
"pnk (homo sapiens) (polynucleotide kinase 3'-phosphatase (homo sapiens))",
"pnkp (homo sapiens)"
] | [
"polynucleotide kinase 3'-phosphatase (drosophila melanogaster)",
"polynucleotide kinase 3'- phosphatase (mus musculus)",
"polynucleotide kinase 3'-phosphatase (xenopus tropicalis)",
"polynucleotide kinase 3'-phosphatase (danio rerio)",
"polynucleotide kinase 3'-phosphatase (sus scrofa)",
"polynucleotide ... | Given the context 'Interestingly the amino terminus of the long-form aprataxin is homologous with polynucleotidekinase-3'-phosphatase, which has been demonstrated to be involved in base excision repair, a subtype of single-strand DNA break repair, through interaction with XRCC1, DNA polymerase beta, and DNA ligase III.', answer the user's query. |
What is the biomedical concept corresponding to 'xrcc1'? | [
"xrcc1 (homo sapiens)",
"x-ray repair cross complementing 1 (homo sapiens)"
] | [
"xrcc1 (xenopus tropicalis) (x-ray repair complementing defective repair in chinese hamster cells 1 (xenopus tropicalis))",
"xrcc1 (xenopus tropicalis) (regulator of chromosome condensation 1 (xenopus tropicalis))",
"xrcc1 (xenopus laevis) (regulator of chromosome condensation 1 s homeolog (xenopus laevis))",
... | Given the context 'Interestingly the amino terminus of the long-form aprataxin is homologous with polynucleotidekinase-3'-phosphatase, which has been demonstrated to be involved in base excision repair, a subtype of single-strand DNA break repair, through interaction with XRCC1, DNA polymerase beta, and DNA ligase III.', answer the user's query. |
What is the biomedical concept corresponding to 'dna polymerase beta'? | [
"dna polymerase beta (homo sapiens)",
"polb (homo sapiens) (dna polymerase beta (homo sapiens))"
] | [
"polymerase (dna directed), beta (mus musculus)",
"dna polymerase iota (homo sapiens)",
"dna polymerase theta (homo sapiens)",
"dna polymerase eta (homo sapiens)",
"dna polymerase nu (homo sapiens)",
"dna polymerase lambda (homo sapiens)",
"polq (homo sapiens) (dna polymerase theta (homo sapiens))",
"... | Given the context 'Interestingly the amino terminus of the long-form aprataxin is homologous with polynucleotidekinase-3'-phosphatase, which has been demonstrated to be involved in base excision repair, a subtype of single-strand DNA break repair, through interaction with XRCC1, DNA polymerase beta, and DNA ligase III.', answer the user's query. |
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