IdA
string | IdB
string | labels
int64 | mechanism
string | effect
string | score
float64 | sentence
string | signor_id
string |
|---|---|---|---|---|---|---|---|
Q13950
|
P27361
| 0
|
phosphorylation
|
up-regulates
| 0.565
|
In this study, we identified two phosphorylation sites in runx2 at ser301 and ser319 that are required for mapk-dependent activation of runx2 transcriptional activity and osteoblast differentiation.
|
SIGNOR-188347
|
Q13153
|
P35240
| 1
|
phosphorylation
|
down-regulates
| 0.645
|
Merlin contains a c-terminal serine 518, which is phosphorylated both by p21-activated kinase (pak) and protein kinase a (pka) (shaw et al., 2001;kissil et al., 2002;xiao et al., 2002;alfthan et al., 2004). Phosphorylation at this site is predicted to result in a more open conformation incapable of inhibiting cell growth,
|
SIGNOR-159764
|
Q969R2
|
P48729
| 0
|
phosphorylation
|
up-regulates activity
| 0.2
|
CK1a1, JNK1 and CDK1 had the highest site-specific activity for ORP4L, while CDK1, GSK3a, CK1a1 and GSK3b showed the highest specificity for the site when corrected for background activity with ORP4L-S4A. Because of the complexity of the serine/proline-rich site, we did not determine which serine(s) in ORP4L were phosphorylated by candidate kinases.|We conclude that phosphorylation of a unique serine/proline motif in the ORD induces a conformation change in ORP4L that enhances interaction with vimentin and cholesterol extraction from membranes.
|
SIGNOR-264877
|
P06239
|
Q96LC7
| 1
|
phosphorylation
|
up-regulates
| 0.26
|
These results suggest that the tyrosines at positions 597 and 667, contained within itim-like motifs, are likely targets of phosphorylation by several classes of signaling molecules, including lck, jak3, and emt. The tyrosine located at position y691 was also contributing to the phosphorylation of the wild-type siglec tail by lck and jak3 kinases. Y597 and y667 are likely involved in intracellular signaling
|
SIGNOR-112491
|
P10398
|
P12931
| 0
|
phosphorylation
|
up-regulates activity
| 0.489
|
A-raf behaves like raf-1, being weakly activated by oncogenic ras more strongly activated by oncogenic src, and these signals synergize to give maximal activation
|
SIGNOR-236459
|
P63000
|
O60890
| 0
|
gtpase-activating protein
|
up-regulates activity
| 0.591
|
OPHN-1 colocalized with the actin cytoskeleton in neuronal and glial cells. We have previously shown that OPHN1 stimulates GTPases activity of RhoA, Cdc42, and Rac1 in vitro
|
SIGNOR-268399
|
P19784
|
Q99801
| 1
|
phosphorylation
|
up-regulates
| 0.315
|
In vitro kinase assays followed by mass spectrometric analyses demonstrated that ck2 phosphorylated recombinant nkx3.1 on thr89 and thr93. We have also determined that nkx3.1 is degraded primarily through a proteasomal pathway, suggesting that phosphorylation by ck2 protects nkx3.1 from degradation.
|
SIGNOR-145501
|
P78527
|
P67809
| 1
|
phosphorylation
|
up-regulates activity
| 0.338
|
The DNA-PK subunits and YB-1 phosphorylated at T89 were found colocalized suggesting their in vivo interaction.DNA-PK directly phosphorylates YB-1 and, this way, modulates YB-1 function. Point mutation of YB-1 at this residue abrogated the translocation of YB-1 into the nucleus.
|
SIGNOR-277611
|
O14757
|
O15350
| 1
|
phosphorylation
|
up-regulates
| 0.536
|
We found that endogenous p73alpha is serine phosphorylated by endogenous chk1 upon dna damage, which is a mechanism required for the apoptotic-inducing function of p73alpha.
|
SIGNOR-118913
|
P27361
|
P27708
| 1
|
phosphorylation
|
up-regulates
| 0.2
|
Cad is a multifunctional protein that initiates and regulates mammalian de novo pyrimidine biosynthesis. The activation of the pathway required for cell proliferation is a consequence of the phosphorylation of cad thr-456 by mitogen-activated protein (map) kinase.Activated map kinase (erk1/2), the enzyme responsible for the phosphorylation of thr-456, was also present in larger amounts in the nucleus than the cytosol
|
SIGNOR-137179
|
Q96EB6
|
P23025
| 1
|
deacetylation
|
up-regulates activity
| 0.511
|
SIRT1 deacetylates XPA at residues K63, K67, and K215 to promote interactions with ATR
|
SIGNOR-262294
|
Q9NZJ5
|
O15294
| 1
|
phosphorylation
|
up-regulates activity
| 0.2
|
Collectively, these results indicate that upon cold and \u03b2-adrenergic stimulation PERK-activated OGT catalyzes the O-GlcNAcylation of CK2\u03b1 and TOM70 which enhances MIC19 import into the mitochondria increasing cristae formation and cell respiration (Figure 7I).|Here, we report that the ER-resident kinase PERK is activated upon cold or \u03b2-adrenergic stimulation and directly phosphorylates OGT.
|
SIGNOR-279736
|
Q9UQM7
|
P51790
| 1
|
phosphorylation
|
up-regulates activity
| 0.337
|
Identification of an N-terminal amino acid of the CLC-3 chloride channel critical in phosphorylation-dependent activation of a CaMKII-activated chloride current|The N-terminus of CLC-3, which contains a CaMKII consensus sequence, was phosphorylated by CaMKII in vitro, and mutation of the serine at position 109 (S109A) abolished the CaMKII-dependent Cl(-) conductance, indicating that this residue is important in the gating of CLC-3 at the plasma membrane.
|
SIGNOR-275863
|
Q8WWN8
|
P60953
| 1
|
gtpase-activating protein
|
down-regulates activity
| 0.521
|
We therefore developed a screening-compatible live-cell imaging assay, using FRET-based biosensors for the prototype GTPases RHOA, RAC1 and CDC4215,19,20 (Extended Data Fig. 2 and Supplementary Note 1)|We found catalytic activities for 45/75 RhoGEFs and 48/63 RhoGAPs| Our data thus not only reveal extensive promiscuity among regulators, but also that the inactivating RhoGAPs are less selective than the activating RhoGEFs (p-value=0.02)(Supplementary Table 2).
|
SIGNOR-260457
|
P04150
|
P45983
| 0
|
phosphorylation
|
down-regulates
| 0.638
|
Taken together, these findings suggest that jnk-mediated phosphorylation of the gr-ser226 enhances gr nuclear export and may contribute to termination of gr-mediated transcription.
|
SIGNOR-93558
|
Q01954
|
Q9NRD5
| 0
|
relocalization
|
up-regulates activity
| 0.307
|
we found that the PDZ domain-containing protein PICK1 (protein interacting with C kinase) interacts specifically with the C-termini of BNC1 and ASIC. Our studies showing association of recombinant PICK1 with ASIC and BNC1, and the presence of both PICK1 and ASIC in the synaptosomal fraction
|
SIGNOR-223414
|
P03372
|
P51812
| 0
|
phosphorylation
|
up-regulates
| 0.403
|
S6k1 regulates estrogen receptor alpha (eralpha) by phosphorylating it on serine 167, leading to transcriptional activation of eralpha.
|
SIGNOR-182958
|
P27361
|
O60716
| 1
|
phosphorylation
|
down-regulates activity
| 0.293
|
Upon TGFβ treatment, activated extracellular signal-regulated kinase 1/2 (ERK1/2) phosphorylates T900 of p120-catenin to promote its interaction with Smurf1 and subsequent monoubiquitination. TGFβ promotes monoubiquitination of p120-catenin through Smurf1 to induce junction dissociation.
|
SIGNOR-277506
|
P54646
|
P08559
| 1
|
phosphorylation
|
up-regulates activity
| 0.2
|
AMPKα phosphorylates PDHA subunit on Ser295 and Ser314 to activate PDH complex
|
SIGNOR-276838
|
P53350
|
O15530
| 0
|
phosphorylation
|
up-regulates activity
| 0.2
|
Here, we report that PDK1 directly induces phosphorylation of Polo-like kinase 1 (PLK1), which in turn induces MYC phosphorylation and protein accumulation. We show that PDK1-PLK1-MYC signaling is critical for cancer cell growth and survival, and small-molecule inhibition of PDK1/PLK1 provides an effective approach for therapeutic targeting of MYC dependency
|
SIGNOR-243519
|
P49841
|
Q13887
| 1
|
phosphorylation
|
down-regulates
| 0.368
|
Stability of the klf5 is mediated by proteasomal degradation via phosphorylation by glycogen synthase kinase 3_ (gsk3_) and recognition by f-box and wd repeat domain-containing 7 (fbw7) of a phosphodegron sequence surrounding serine 303 in klf5
|
SIGNOR-203627
|
P22460
|
Q13131
| 0
|
phosphorylation
|
down-regulates activity
| 0.2
|
Thus, AMPK directly phosphorylates the subunit of KV1.5 at Ser592 and, to a lesser extent, at Ser560
|
SIGNOR-277814
|
Q15120
|
P29803
| 1
|
phosphorylation
|
down-regulates
| 0.563
|
Pdh2 was found to be very similar to pdh1 / in the mechanism of inactivation by phosphorylation of three sites;and (iv) in the phosphorylation of sites 1 and 2 by pdk3 / (ser-264 (site 1), ser-271 (site 2), and ser-203 (site 3)
|
SIGNOR-143974
|
P43694
|
P48775
| 1
|
transcriptional regulation
|
down-regulates quantity by repression
| 0.252
|
GATA4 inhibits expression of the tryptophan oxygenase gene by binding to the TATA box in fetal hepatocytes.
|
SIGNOR-268994
|
Q8NBJ5
|
Q15848
| 1
|
palmitoylation
|
up-regulates activity
| 0.2
|
We conclude that GLT25D1 regulates HMW adiponectin secretion and lipid accumulation, consistent with changes in mice after high-fat feeding. These results suggest a novel function of GLT25D1 leading to decreased HMW adiponectin secretion in early obesity.
|
SIGNOR-261149
|
P53355
|
Q96FA3
| 1
|
phosphorylation
|
down-regulates quantity by destabilization
| 0.2
|
DAPK1, which directly binds to and phosphorylates Pellino1 at Ser39, leading to Pellino1 poly-ubiquitination and turnover.
|
SIGNOR-277531
|
Q96PU5
|
Q13114
| 1
|
ubiquitination
|
up-regulates activity
| 0.27
|
Nedd4l promotes TRAF3 to interact with cIAP1/2 and HECTD3.|Ubiquitination of TRAF3 by Nedd4l promotes interaction of TRAF3 with proteins such as cIAP1/2, HECTD3, and TBK1.
|
SIGNOR-278587
|
Q14653
|
P12931
| 0
|
phosphorylation
|
up-regulates activity
| 0.314
|
Mechanistically, the progesterone-PGR axis activates SRC, which then mediates phosphorylation of IRF3 at Y107.|Taken together, these results suggest that P4 induces PGR-dependent activation of SRC, which promotes virus-triggered activation of IRF3 as well as induction of downstream antiviral genes.In the above experiments, we noticed that SeV-induced phosphorylation of IRF3S386 but not phosphorylation of TBK1S172 (p-TBK1S172, a hallmark for TBK1 activation) was increased by P4 treatment (Fig. 4g) or decreased by knockout of PGR (Fig. 4h).
|
SIGNOR-279118
|
O00141
|
P19634
| 1
|
phosphorylation
|
up-regulates activity
| 0.304
|
Phosphorylation of NHE1 Ser 703 by SGK1 is essential for the binding of 14-3-3 protein to NHE1 , ] which, in turn, is critical in the activation of this Na + / H + exchanger , ].|These data suggest that endothelial SGK1 activates NHE1 in response to MG treatment.
|
SIGNOR-280123
|
Q96CX2
|
O14965
| 0
|
phosphorylation
|
up-regulates activity
| 0.272
|
In addition, Aurora A phosphorylated KCTD12 at serine 243, thereby initiating a positive feedback loop necessary for KCTD12 to exert its cancer-promoting effects.
|
SIGNOR-273544
|
Q03135
|
Q8ND25
| 0
|
polyubiquitination
|
down-regulates quantity by destabilization
| 0.364
|
The ubiquitin ligase ZNRF1 promotes caveolin-1 ubiquitination and degradation to modulate inflammation. ZNRF1 mediates CAV1 polyubiquitination at lysine 39 and promote CAV1 degradation to modulate TLR4-mediated immune response.
|
SIGNOR-272327
|
P30304
|
P14635
| 1
|
dephosphorylation
|
up-regulates activity
| 0.855
|
Cdc25A dephosphorylates and activates CyclinE\u2013Cdk2, CyclinA\u2013Cdk2 and CyclinB\u2013Cdk1, whereas Cdc25B and Cdc25C primarily target CyclinB\u2013Cdk1 [4,5] .
|
SIGNOR-277137
|
P35125
|
P60953
| 0
|
relocalization
|
up-regulates
| 0.359
|
In quiescent cells, tre17 is localized to intracellular filamentous and punctate structures in the cytoplasm, folded in an inactive conformation. Upon growth factor addition, cdc42 and rac1 become activated and recruit tre17 to the plasma membrane. Stable membrane localization of tre17 also requires polymerized actin. This recruitment process leads to a conformational change in tre17, such that the n-terminal portion of the molecule further stimulates the accumulation of cortical actin.
|
SIGNOR-98935
|
Q08209
|
Q12968
| 1
|
dephosphorylation
|
up-regulates
| 0.538
|
Calcineurin directly dephosphorylates nfat resulting in the nuclear import of nfat.
|
SIGNOR-176376
|
P56962
|
Q9UHD2
| 0
|
phosphorylation
|
up-regulates activity
| 0.291
|
Stx17 is phosphorylated by TBK1 whereby phospho-Stx17 controls the formation of the ATG13+FIP200+ mammalian pre-autophagosomal structure (mPAS) in response to induction of autophagy. TBK1 phosphorylates Stx17 at S202.
|
SIGNOR-273812
|
Q07955
|
Q96SB4
| 0
|
phosphorylation
|
up-regulates
| 0.799
|
These results suggest that the formation of complexes between sf2/asf and srpks, which is influenced by the phosphorylation state of sf2/asf, may have regulatory roles in the assembly and localization of this splicing factor.
|
SIGNOR-66465
|
Q8IZQ8
|
P49841
| 0
|
phosphorylation
|
down-regulates activity
| 0.397
|
In vitro and in vivo (HEK 293 cells) kinase assays with synthetic peptides and full-length myocardin demonstrated that myocardin was a primed GSK3beta substrate, with serines 455 to 467 and 624 to 636 being the major GSK3beta phosphorylation sites. GSK3β phosphorylation at the sites identified inhibits myocardin intrinsic transcriptional activity
|
SIGNOR-251247
|
P55957
|
P45983
| 0
|
phosphorylation
|
up-regulates activity
| 0.594
|
(b) Phosphorylation of Bid at Thr59 by JNK1 and JNK2 (in vitro kinase assay).
|
SIGNOR-279076
|
P60891
|
O95835
| 0
|
phosphorylation
|
down-regulates quantity by destabilization
| 0.2
|
Recruitment of TRAF2 to PRPS1/2 requires phosphorylation of PRPS1 S285 or PRPS2 T285, which is mediated by low stiffness-activated large tumor suppressor (LATS)1/2 kinases.LATS1/2-dependent S/T285 phosphorylation is required for PRPS1/2 ubiquitination and degradation at low stiffness.
|
SIGNOR-276505
|
Q16584
|
P49841
| 0
|
phosphorylation
|
up-regulates activity
| 0.336
|
Further, investigation revealed that MLK3 was phosphorylated at two residues Ser789 and Ser793 by GSK3\u03b2 ( xref ).|When, these two sites on MLK3 were mutated to non-phosphorable Ala, the activation of MLK3 by GSK3\u03b2 was blocked, and neuronal cell death upon NGF withdrawal also prevented ( xref ).
|
SIGNOR-279615
|
Q6FI13
|
Q14493
| 0
|
translation regulation
|
up-regulates quantity by expression
| 0.2
|
Synthesis of mature histone mRNA requires only a single processing reaction: an endonucleolytic cleavage between a conserved stem-loop and a purine-rich downstream element to form the 3' end. The stem-loop binding protein (SLBP) is required for processing, and following processing, histone mRNA is transported to the cytoplasm, where SLBP participates in translation of the histone mRNA|We used radiolabeled probes generated by PCR targeting the open reading frame (ORF) to detect histones H2A, H2B, H3, H4, and H1 and used 7SK snRNA as a loading control (Fig. 2A). The abundance of histone H2A, H2B, H3, and H4 mRNAs is reduced to 37% to 70% of control levels in the SLBP knockdown cells when compared to the C2 control.
|
SIGNOR-265396
|
O60260
|
Q00535
| 0
|
phosphorylation
|
down-regulates
| 0.2
|
Phosphorylation by cdk5 decreased the auto-ubiquitylation of parkin both in vitro and in vivo.
|
SIGNOR-153445
|
P05129
|
P25098
| 1
|
phosphorylation
|
up-regulates
| 0.2
|
Phosphorylation of grk2 by protein kinase c abolishes its inhibition by calmodulinin vitro, grk2 was preferentially phosphorylated by pkc isoforms alpha, gamma, and delta
|
SIGNOR-83231
|
P34947
|
P30411
| 1
|
phosphorylation
|
down-regulates activity
| 0.489
|
Ligand-induced phosphorylation is found at Ser339 and Ser346/Ser348 that could be executed by several G protein-coupled receptor kinases. 32P labeling of peptide 3 containing pS346/pS348 was enhanced 1.5–3-fold as compared with mock-transfected cells in the order GRK6 < GRK5 < GRK2 < GRK4α < GRK3. several endogenous GRKs may phosphorylate the B2R and that the various GRKs, even without apparent effect on total GPCR phosphorylation levels, may induce distinct phosphorylation patterns with possible functional consequences for receptor desensitization and sequestration.
|
SIGNOR-251208
|
Q92466
|
Q9UPU5
| 0
|
deubiquitination
|
up-regulates
| 0.703
|
Usp24-mediated ddb2 deubiquitination prevents ddb2 degradation
|
SIGNOR-199731
|
P24666
|
P31749
| 1
|
dephosphorylation
|
down-regulates activity
| 0.321
|
Reduction in the levels of both LMW-PTP isoforms in vitro and in vivo increased tyrosine phosphorylation of IR and AktSer473 and increased IRS-1- and IRS-2-associated PI3-K activities in both liver and fat.|Activated PI3-K stimulates Akt (or protein kinase B) that in turn phosphorylates and inactivates glycogen synthase kinase-3
|
SIGNOR-248455
|
P01008
|
P00742
| 1
|
cleavage
|
down-regulates activity
| 0.877
|
Antithrombin (AT), a member of the serine protease inhibitor (SERPIN) superfamily, is a major circulating inhibitor of blood coagulation proteases such as factor (F) IIa (known as thrombin), FXa and, to a lesser extent, FIXa, FXIa and FXIIa. SERPINC1, which encodes AT in humans, is located on chromosome 1q25.1
|
SIGNOR-264138
|
O43318
|
P49593
| 0
|
dephosphorylation
|
down-regulates activity
| 0.395
|
However, our current work shows that POPX2 can downregulate TAK1 and affect the anti-apoptotic activities of TAK1, implying that silencing POPX2 could facilitate TAK1 activation and will lead to increased cell survival.|We have also demonstrated that POPX2 can directly dephosphorylate TAK1 (XREF_FIG).
|
SIGNOR-277047
|
P13500
|
Q16665
| 0
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.403
|
These findings suggest that both MCP-1 and MCP-5 are HIF-1 target genes and that HIF-1α is involved in transcriptional induction of these two chemokines in astrocytes by hypoxia.
|
SIGNOR-251719
|
P49841
|
E9PAV3
| 1
|
phosphorylation
|
down-regulates
| 0.2
|
Gsk3 beta-dependent phosphorylation of the alpha nac coactivator regulates its nuclear translocation and proteasome-mediated degradation.
|
SIGNOR-123262
|
P28482
|
P24928
| 1
|
phosphorylation
|
down-regulates
| 0.311
|
Erk1/2 are major ser-5 kinases after h2o2 treatment. These results suggest that subsequent to h2o2 treatment, the ser-5-phosphorylated form, but not the ser-2-phosphorylated form or the unphosphorylated form, is targeted for rapid proteasomal degradation through its ubiquitination.
|
SIGNOR-120160
|
P46020
|
P22694
| 0
|
phosphorylation
|
down-regulates activity
| 0.325
|
Phosphorylation of the alpha and beta subunits by the 3',5'-cyclic adenosine monophosphate (cAMP)-dependent protein kinase (PKA) also relieves inhibition of the gamma subunit and thereby activates the enzyme.
|
SIGNOR-267413
|
P06493
|
P52732
| 1
|
phosphorylation
|
up-regulates activity
| 0.638
|
Nek6 phosphorylated Eg5 at several sites in vitro and one of these sites, Ser1033, is phosphorylated in vivo during mitosis. Whereas CDK1 phosphorylates nearly all Eg5 at Thr926 during mitosis, Nek6 phosphorylates approximately 3% of Eg5, primarily at the spindle poles.
|
SIGNOR-273887
|
Q5VWQ8
|
Q13546
| 0
|
phosphorylation
|
up-regulates activity
| 0.426
|
We further show that RIP1 (the Ser/Thr protein kinase receptor-interacting protein) associates with the GAP domain of AIP1 and mediates TNF-induced AIP1 phosphorylation at Ser-604 and JNK/p38 activation as demonstrated by both overexpression and small interfering RNA knockdown of RIP1 in EC.
|
SIGNOR-259976
|
P45984
|
P04637
| 1
|
phosphorylation
|
up-regulates
| 0.747
|
These findings strongly suggest that jnks are the major direct signaling mediators of uvb-induced p53 phosphorylation at serine 20. furthermore, phosphorylation of p53 at serine 20 by uvb-activated jnks and uvb-induced p53-dependent transcriptional activity were suppressed in jnk1 or jnk2 knockout (jnk1(-/-) or jnk2(-/-)) cells.
|
SIGNOR-115835
|
O95886
|
Q9UPX8
| 1
|
relocalization
|
up-regulates activity
| 0.788
|
SHANK proteins are ‘master’ scaffolding proteins that tether and organize intermediate scaffolding proteins. They are located at excitatory synapses, where they are crucial for proper synaptic development and function. SAPAP proteins subsequently bind to the PDZ domain of members of the SHANK protein family. SHANK proteins then bind to the actin cytoskeleton and to Homer protein, which in turn interacts with mGluRs. Through these extended links, PSD95, SAPAP, SHANK and Homer proteins form a quaternary complex that brings together mGluR and NMDAR complexes in the PSD (FIG. 3).
|
SIGNOR-264593
|
P55210
|
P09874
| 1
|
cleavage
|
down-regulates
| 0.719
|
Caspase-7 cleaves parp;redundancy exists between the caspase-3 and -7 at the level of parp proteolysis.
|
SIGNOR-83703
|
Q8NEZ5
|
P35613
| 1
|
ubiquitination
|
down-regulates quantity by destabilization
| 0.427
|
F-Box Protein FBXO22 Mediates Polyubiquitination and Degradation of CD147 to Reverse Cisplatin Resistance of Tumor Cells
|
SIGNOR-273452
|
P19484
|
P05771
| 0
|
phosphorylation
|
up-regulates activity
| 0.33
|
This occurs following PKCβ phosphorylation of TFEB on three serine residues located in its last 15 amino acids. This post-translational modification stabilizes and increases the activity of this transcription factor.
|
SIGNOR-255315
|
Q00987
|
P46934
| 0
|
ubiquitination
|
up-regulates quantity by stabilization
| 0.466
|
NEDD4 promotes MDM2 ubiquitination in a dose- and time-dependent manner, whereas depletion of NEDD4 reduced the half-life of endogenous MDM2 [ xref ].
|
SIGNOR-278769
|
P48730
|
P27707
| 1
|
phosphorylation
|
up-regulates activity
| 0.339
|
Site-directed mutagenesis demonstrated that only Ser-74 phosphorylation was involved in Deoxycytidine kinase activation by CKI delta, strengthening the key role of this residue in the control of Deoxycytidine kinase activity.|We showed that recombinant CKI delta phosphorylated several residues of bacterially overexpressed Deoxycytidine kinase: Ser-74, but also Ser-11, Ser-15, and Thr-72.
|
SIGNOR-280233
|
Q16659
|
Q9Y6Q9
| 1
|
phosphorylation
|
up-regulates
| 0.481
|
Here, we report that erk3 interacted with and phosphorylated steroid receptor coactivator 3 (src-3), an oncogenic protein overexpressed in multiple human cancers at serine 857 (s857)
|
SIGNOR-196957
|
Q92502
|
P60953
| 1
|
gtpase-activating protein
|
down-regulates activity
| 0.511
|
We therefore developed a screening-compatible live-cell imaging assay, using FRET-based biosensors for the prototype GTPases RHOA, RAC1 and CDC4215,19,20 (Extended Data Fig. 2 and Supplementary Note 1)|We found catalytic activities for 45/75 RhoGEFs and 48/63 RhoGAPs| Our data thus not only reveal extensive promiscuity among regulators, but also that the inactivating RhoGAPs are less selective than the activating RhoGEFs (p-value=0.02)(Supplementary Table 2).
|
SIGNOR-260520
|
Q5VTY9
|
Q15465
| 1
|
palmitoylation
|
up-regulates
| 0.683
|
Our molecular analysis of knockout mice deficient in skn, the murine homolog of the drosophila ski gene, which catalyzes hh palmitoylation, and gene-targeted mice producting a non palmitoylated form of shh indicates that hh palmitoylation is essential for its activity as well as the generation of a protein gradient in the developing embryos
|
SIGNOR-124118
|
P62987
|
Q93009
| 0
|
cleavage
|
up-regulates quantity
| 0.735
|
Here we provide data suggesting that two of the four mammalian ubiquitin precursors, UBA52 and UBA80, are processed mostly post-translationally whereas the other two, UBB and UBC, probably undergo a combination of co- and post-translational processing. Using an unbiased biochemical approach we found that UCHL3, USP9X, USP7, USP5 and Otulin/Gumby/FAM105b are by far the most active DUBs acting on these precursors.
|
SIGNOR-270823
|
P01137
|
P02452
| 1
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.485
|
COL1A1 expression is regulated by upstream genes and the binding of regulatory elements at multiple binding sites upstream of its promoter. During cancer progression, CAFs reorganize and cross-link COL1A1, which accumulates and stiffens in the tumor stroma [12], [18]. This process may involve fibrogenic factors, especially transforming growth factor-beta (TGF-β1). Indeed, a TGF-β1 response sequence was identified 174 nucleotides upstream of the COL1A1 transcription start site, and was shown to up-regulate COL1A1 promoter activity
|
SIGNOR-277678
|
O75398
|
Q05925
| 1
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.2
|
Deaf1 is the first transcription factor implicated in the regulation of En1, a critical determinant of eccrine fate, within keratinocytes.
|
SIGNOR-269062
|
P01112
|
Q07890
| 0
|
guanine nucleotide exchange factor
|
up-regulates
| 0.79
|
Grb2 binds and activates sos, which then activates ras, and this activates p110 independently of p85.
|
SIGNOR-175262
|
P68400
|
Q13133
| 1
|
phosphorylation
|
down-regulates
| 0.2
|
Ck2? Also phosphorylated lxr? At s198 in vitro, suggesting that ck2 may be a bona fide s198 kinase. our results show that macrophage lxr? Phosphorylation at s198 affects the transcriptional activity of the receptor in a gene-specific manner (fig. ?(Fig.3a)3a) and restricts the repertoire of genes regulated by lxr?
|
SIGNOR-160640
|
Q9BX66
|
P00519
| 0
|
phosphorylation
|
up-regulates activity
| 0.424
|
We have here identified Tyr360 in CAP as a major phosphorylation site by c-Abl, although Tyr 632 also might contribute since its substitution in combination with the Y360F mutation reduced the phosphorylation of CAP to a very low level. Y360 in CAP is the major phosphorylation site of c-Abl. Since Tyr326 was not a major c-Abl phosphorylation site, we sought to identify a putative other kinase that might be involved in the phosphorylation of Y326 in CAP.
|
SIGNOR-278153
|
P23396
|
P31749
| 0
|
phosphorylation
|
up-regulates activity
| 0.368
|
Here, we show that human RPS3 is a physiological target of Akt kinase and a novel mediator of neuronal apoptosis. NGF stimulation resulted in phosphorylation of threonine 70 of RPS3 by Akt, and this phosphorylation was required for Akt binding to RPS3.our experiment demonstrated that Akt up-regulates the endonuclease activity of RPS3 via phosphorylation and led us to believe that Akt phosphorylation of RPS3 after DNA damage is an antiapoptotic signal or a molecular switch that extends the life of a cell after DNA damage.
|
SIGNOR-259815
|
P06213
|
Q9Y4H2
| 1
|
phosphorylation
|
down-regulates activity
| 0.757
|
Tyr624 and Tyr628 are involved in the interaction between the IR and the KRLB domain of IRS-2, including tyrosine phosphorylation, and Tyr628 seems to be more important than Tyr624 in this process. the binding between the insulin receptor and the KRLB domain of IRS-2 results in tyrosine phosphorylation of the KRLB domain, and this leads to decreased binding of IRS-2 to the insulin receptor.
|
SIGNOR-251319
|
Q9NR19
|
Q14457
| 1
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.2
|
As expected, we found that glucose deprivation induced the binding of TFEB (Figure S4C) and ACSS2 (Figure S4D) to the promoter regions of MAP1LC3B, ATG3, and WIPI-1 as well as mRNA (Figure 3H) and protein (Figure 3I) expression of these genes;
|
SIGNOR-276561
|
Q9Y365
|
P68400
| 0
|
phosphorylation
|
down-regulates
| 0.409
|
Interestingly, hypotonic extracts prepared from hek293t cells expressing the serine to alanine mutant exhibited increased lipid transfer activity compared with those from wild-type stard10-expressing cells, suggesting that, in a cellular context, phosphorylation on serine 284 negatively regulates stard10 activity
|
SIGNOR-155740
|
Q14703
|
Q96BA8
| 1
|
cleavage
|
up-regulates
| 0.571
|
Cleavage of oasis by site-1 and site-2 proteases / oasis is cleaved at the membrane under er stress conditions and that its cleaved n-terminal domain translocates into the nucleus;and then activates transcription of target genes
|
SIGNOR-143785
|
O96028
|
P38398
| 0
|
ubiquitination
|
down-regulates quantity by destabilization
| 0.2
|
Proteomic data analysis revealed interaction between NSD2 and BRCA1 and further study revealed that BRCA1 ubiquitinates NSD2 at K292 residue.|These results suggested that BRCA1 interacts with and promotes degradation of NSD2 via polyubiquitination .
|
SIGNOR-278745
|
O15530
|
P17252
| 1
|
phosphorylation
|
up-regulates
| 0.417
|
One of the most studied events controlled by ptdins(3,4,5)p3, comprises the activation of a of agc family protein kinases, including isoforms of protein kinase b (pkb)/akt, p70 ribosomal s6 kinase (s6k), serum and glucocorticoid-induced protein kinase (sgk) and protein kinase c (pkc), which play crucial roles in regulating physiological processes relevant to metabolism, growth, proliferation and survival. Here, we review recent biochemical, genetic and structural studies on the 3-phosphoinositide-dependent protein kinase-1 (pdk1), which phosphorylates and activates the agc kinase members regulated by pi 3-kinase. We also discuss whether inhibitors of pdk1 might have chemotherapeutic potential in the treatment of cancers in which the pdk1-regulated agc kinases are constitutively activated.
|
SIGNOR-126066
|
O75385
|
P06733
| 1
|
phosphorylation
|
down-regulates activity
| 0.2
|
Here, we demonstrate that, during deprivation of amino acid and growth factors, ULK1/2 directly phosphorylate key glycolytic enzymes including hexokinase (HK), phosphofructokinase 1 (PFK1), enolase 1 (ENO1), and the gluconeogenic enzyme fructose-1,6-bisphosphatase (FBP1).Phosphorylation of these enzymes leads to enhanced HK activity to sustain glucose uptake but reduced activity of FBP1 to block the gluconeogenic route and reduced activity of PFK1 and ENO1 to moderate drop of glucose-6-phosphate and to repartition more carbon flux to pentose phosphate pathway (PPP), maintaining cellular energy and redox homeostasis at cellular and organismal levels.Similar results were also obtained using ULK2 as the kinase (data not shown).
|
SIGNOR-274029
|
Q9UQB3
|
P49841
| 0
|
phosphorylation
|
down-regulates quantity
| 0.347
|
Therefore, our data which supports that partial inhibition of GSK-3beta increases delta-catenin expression, raises an interesting possibility that delta-catenin may be an important downstream target of GSK-3beta signaling that participates in modulating neuronal morphology.|We demonstrate that GSK-3beta forms a stable complex with delta-catenin and phosphorylates delta-catenin in neurons, an event that mediates ubiquitination and subsequent proteasome degradation of delta-catenin.
|
SIGNOR-279719
|
Q12879
|
Q13627
| 0
|
phosphorylation
|
up-regulates quantity
| 0.397
|
DYRK1A enhances the surface expression of GluN1 and GluN2A receptors.|Mechanistically, the DYRK1A-dependent phosphorylation of GluN2A at Ser 1048 hinders the internalization of GluN1/GluN2A, causing an increase of surface GluN1/GluN2A in heterologous systems, as well as in primary cortical neurons.
|
SIGNOR-279327
|
O00141
|
P42858
| 1
|
phosphorylation
|
down-regulates
| 0.372
|
The serum- and glucocorticoid-induced kinase sgk inhibits mutant huntingtin-induced toxicity by phosphorylating serine 421 of huntingtin.
|
SIGNOR-121349
|
P42684
|
P00519
| 0
|
phosphorylation
|
up-regulates
| 0.517
|
The results show that arg is stabilized in response to 0.1 mm h2o2 by autophosphorylation of y-261, consistent with involvement of the arg kinase function in regulating arg levels. The results further demonstrate that c-abl-mediated phosphorylation of arg on y-261 similarly confers arg stabilization
|
SIGNOR-134396
|
P19784
|
P13349
| 1
|
phosphorylation
|
up-regulates activity
| 0.307
|
Here, we report that Myf-5 protein constitutes a substrate for phosphorylation in vitro by protein kinase CK2. We identified two potential phosphorylation sites at serine49 and serine133, both of which seem to be necessary for Myf-5 activity.
|
SIGNOR-251016
|
Q02156
|
P17302
| 1
|
phosphorylation
|
down-regulates activity
| 0.44
|
Phosphorylation of connexin43 on serine368 by protein kinase C regulates gap junctional communication.|These data strongly suggest that PKC directly phosphorylates Cx43 on S368 in vivo, which results in a change in single channel behavior that contributes to a decrease in intercellular communication.
|
SIGNOR-144465
|
P45983
|
Q96LC9
| 1
|
phosphorylation
|
up-regulates activity
| 0.689
|
Activated JNK causes BimL and Bmf phosphorylation in vivo. It is known that UV radiation causes the release of Bim and Bmf from dynein and myosin V motor complexes and that these proteins cause Bax/Bak-dependent apoptosis . The results of this study demonstrate that JNK can engage this apoptotic pathway by phosphorylation of BH3-only proteins, including Bim and Bmf.
|
SIGNOR-250116
|
Q96T68
|
P84243
| 1
|
methylation
|
up-regulates activity
| 0.2
|
Here, we have characterized a previously undescribed member of the histone H3K9 methyltransferase family named CLLD8 (or SETDB2 or KMT1F). This protein contributes to the trimethylation of both interspersed repetitive elements and centromere-associated repeats and participates in the recruitment of heterochromatin protein 1 to centromeres. Methylation of histone H3 at lysine 9 (H3K9) has emerged as an important player in the formation of heterochromatin, chromatin condensation, and transcriptional repression.
|
SIGNOR-263894
|
P78362
|
P23443
| 0
|
phosphorylation
|
up-regulates activity
| 0.355
|
Altogether, these results identify S6K1-phosphorylated SRPK2 as an essential mediator of IGF1-stimulated SG formation in hPDAC cells.|The nodes of the core SG network are known to contribute to SG formation to varying degrees and it is possible that S6K1-stimulated SRPK2 may impact their contribution; this is consistent with the predicted model whereby SG assembly is subject to regulation by positive and negative cooperativity of extrinsic factors with the core network interactions (14).
|
SIGNOR-280121
|
Q7Z6J0
|
O14964
| 1
|
ubiquitination
|
down-regulates quantity
| 0.246
|
Importantly, ubiquitination of Hrs mediated by POSH caused the reduction of Hrs level via the ubiquitin-proteasome pathway.
|
SIGNOR-278575
|
P78352
|
P00519
| 0
|
phosphorylation
|
up-regulates activity
| 0.441
|
Moreover, c-Abl phosphorylates PSD-95 at tyrosine 533.|c-Abl modulates the synaptic contact number and PSD-95 clustering.
|
SIGNOR-278391
|
P22612
|
Q14896
| 1
|
phosphorylation
|
up-regulates
| 0.275
|
Phosphorylation of cmybp-c by pka speeds actomyosin interactions and contributes to increased cardiac contractility following _-adrenergic stimulation.7, 8 phosphorylation by pka is essential for proper cardiac function /for the human isoform, three pka sites were previously identified (ser275, ser284, and ser304) /our results indicate that pka phosphorylates up to four sites in both the murine and human m-domains including a novel site not previously described for either protein (ser307 for mouse and ser311 for human).
|
SIGNOR-163788
|
P11309
|
P68431
| 1
|
phosphorylation
|
down-regulates activity
| 0.2
|
Pim1-dependent phosphorylation of histone h3 at serine 10 is required for myc-dependent transcriptional activation and oncogenic transformation.
|
SIGNOR-156946
|
P35232
|
P10721
| 0
|
phosphorylation
|
up-regulates activity
| 0.2
|
In this study, we showed that c-Kit associates with PHB to upregulate phospho-PHB in the lipid raft of the plasma membrane.|c-Kit phosphorylates PHB at the Tyr259 residue.
|
SIGNOR-278362
|
Q6U7Q0
|
P49841
| 0
|
phosphorylation
|
down-regulates quantity by destabilization
| 0.2
|
CK1delta and GSK3beta kinases sequentially phosphorylate ZNF322A at serine-396 and then serine-391. Moreover, the doubly phosphorylated ZNF322A protein creates a destruction motif for the ubiquitin ligase FBXW7alpha leading to ZNF322A protein destruction.
|
SIGNOR-264891
|
P31749
|
P23588
| 1
|
phosphorylation
|
up-regulates
| 0.393
|
Using an in vitro kinase assay, we found that pkb can directly phosphorylate eif4b on serine 422 (ser422). This was prevented by pretreatment of cells with the phosphatidylinositol 3-kinase (pi3k) inhibitor ly294002 or pharmacological inhibition of pkb. Phosphorylation regultes the activation of eukaryotic translation initiation factor 4b.
|
SIGNOR-252520
|
P17302
|
Q02156
| 0
|
phosphorylation
|
down-regulates activity
| 0.44
|
Phosphorylation of connexin43 on serine368 by protein kinase C regulates gap junctional communication.|These data strongly suggest that PKC directly phosphorylates Cx43 on S368 in vivo, which results in a change in single channel behavior that contributes to a decrease in intercellular communication.
|
SIGNOR-144465
|
O95628
|
Q96T37
| 1
|
ubiquitination
|
down-regulates quantity by destabilization
| 0.359
|
We demonstrate that RBM15 is methylated by protein arginine methyltransferase 1 (PRMT1) at residue R578, leading to its degradation via ubiquitylation by an E3 ligase (CNOT4).
|
SIGNOR-271466
|
Q9H4B6
|
O00506
| 0
|
phosphorylation
|
down-regulates activity
| 0.28
|
STK25 inhibits the ability of SAV1 to counteract STRIPAK.|Using this antibody, we confirmed that SAV1 WT was indeed phosphorylated by STK25 at T26 in human cells (XREF_FIG).
|
SIGNOR-278369
|
Q9HAU4
|
P25490
| 1
|
ubiquitination
|
down-regulates quantity by destabilization
| 0.364
|
In addition, Smurf2 decreased the protein half-life and transcriptional activity of YY1.|Wild type Smurf2, but not the E3 ubiquitin ligase defective mutant, increased the poly-ubiquitination of YY1.
|
SIGNOR-278544
|
P05067
|
P24941
| 0
|
phosphorylation
|
down-regulates quantity by destabilization
| 0.267
|
These include a significant increase in APP phosphorylation at Thr 668 by cdk2, cdk4, and cdk5, which increases its beta-amyloid production and APP proteolysis by the activated caspases during cell cycle ( xref ; xref ; xref ; xref ).
|
SIGNOR-280210
|
O75182
|
Q5VTB9
| 0
|
polyubiquitination
|
down-regulates quantity by destabilization
| 0.429
|
Here we identify RNF220 (RING finger protein 220) as a novel ubiquitin ligase for Sin3B. RNF220 specifically interacts with Sin3B both in vitro and in vivo. Sin3B can be regulated by the ubiquitin-proteasome system. Co-expression of RNF220 promotes the ubiquitination and proteasomal degradation of Sin3B.
|
SIGNOR-271943
|
Subsets and Splits
No community queries yet
The top public SQL queries from the community will appear here once available.