IdA
string | IdB
string | labels
int64 | mechanism
string | effect
string | score
float64 | sentence
string | signor_id
string |
|---|---|---|---|---|---|---|---|
P41279
|
Q01970
| 1
|
phosphorylation
|
up-regulates activity
| 0.2
|
Additionally, we found that PAR1-induced Ca2+ signals are transduced through Tpl2, which activates phospholipase C\u03b23 by phosphorylation at Ser537.|These findings raised the question whether Tpl2, which phosphorylates PLCbeta 3 at Ser537 (this report) regulates Ca 2+ signaling in thrombin stimulated cells through phosphorylation of PLCbeta 3 at this site.
|
SIGNOR-278519
|
P16220
|
P01189
| 1
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.37
|
Transcriptional activation of the proopiomelanocortin gene by cyclic AMP-responsive element binding protein|Further, expression of a dominant inhibitory mutant of CREB reduced cAMP stimulated transcription of the full length POMC promoter and the PTRE.
|
SIGNOR-268620
|
P18146
|
P68400
| 0
|
phosphorylation
|
down-regulates activity
| 0.464
|
Casein kinase II associates with Egr-1 and acts as a negative modulator of its DNA binding and transcription activities in NIH 3T3 cells. | There are three CKII recognition sites (S376XXD, T389XE, and T516XXXD) in fragment 10.
|
SIGNOR-250858
|
Q5SQI0
|
Q9NY65
| 1
|
acetylation
|
up-regulates quantity by stabilization
| 0.244
|
Alpha-Tubulin acetyltransferase (alphaTAT1) is the major α-tubulin lysine-40 (K40) acetyltransferase in mammals, nematodes, and protozoa, and its activity plays a conserved role in several microtubule-based processes.|The tubulin subunits of microtubules are acetylated, and lysine-40 (K40) of the alpha-tubulin subunit has been identified as an important conserved site of microtubule acetylation (6–8). This modification is considered a hallmark of stable, long-lived microtubules
|
SIGNOR-272250
|
P53350
|
Q9UNE7
| 0
|
ubiquitination
|
down-regulates quantity by destabilization
| 0.252
|
As indicated in xref , all three Plk1 fragments were ubiquitinated by CHIP, suggesting that CHIP targets multiple sites of Plk1 for ubiquitination.|Mechanistically, CHIP mediated degradation of AR and Plk1 leads to enhanced efficacy of HSP90 inhibitors.
|
SIGNOR-278532
|
P30622
|
P42345
| 0
|
phosphorylation
|
up-regulates activity
| 0.567
|
By contrast to the phosphorylation of p150 Glued by PKA, inhibition of mTOR by rapamycin inhibited the ability of CLIP-170 to bind to microtubules, suggesting that phosphorylation by mTOR promotes CLIP-170 microtubule binding.|The new study confirms this physical interaction in animal cells and suggests that mTOR phosphorylates CLIP-170 on some, but not all, of the sites that are phosphorylated in vivo.
|
SIGNOR-279231
|
O00429
|
Q08209
| 0
|
dephosphorylation
|
up-regulates activity
| 0.277
|
When mitochondrial depolarization is associated with sustained cytosolic Ca(2+) rise, it activates the cytosolic phosphatase calcineurin that normally interacts with Drp1. Calcineurin-dependent dephosphorylation of Drp1, and in particular of its conserved serine 637, regulates its translocation to mitochondria as substantiated by site directed mutagenesis.
|
SIGNOR-248676
|
P12931
|
Q969T9
| 1
|
phosphorylation
|
up-regulates activity
| 0.297
|
Using dominant-negative, constitutively active mutants, RNAi, and pharmacological studies, we demonstrated that phosphorylation of WBP2 at Tyr192 and Tyr231 could be regulated by c-Src and c-Yes kinases.We further showed that abrogating WBP2 phosphorylation impaired >60% of ERα reporter activity, putatively by blocking nuclear entry of WBP2 and its interaction with ERα.
|
SIGNOR-273567
|
O15259
|
P12931
| 0
|
phosphorylation
|
up-regulates activity
| 0.297
|
Src-induced tyrosine phosphorylation could be prevented by mutating the tyrosine residue at position 721 to phenylalanine ( C, lane 12) suggesting that Src kinase phosphorylates NPHP1 at tyrosine 721.
|
SIGNOR-279122
|
Q13315
|
Q16665
| 1
|
phosphorylation
|
up-regulates
| 0.432
|
Here we show that hypoxia results in ataxia telangiectasia mutated (atm)-dependent phosphorylation of hypoxia-inducible factor 1-alpha (hif-1_) on serine(696) and mediates downregulation of mtorc1 signaling. phosphorylation of hif-1_ by atm is required for its stability
|
SIGNOR-169999
|
P52565
|
P17612
| 0
|
phosphorylation
|
down-regulates
| 0.387
|
The results indicate that phosphorylation of gdi_ at ser174 by pka suppresses rhoa activity, providing a potential protective signaling mechanism for inflammatory injury.
|
SIGNOR-180576
|
Q15418
|
P16220
| 1
|
phosphorylation
|
up-regulates activity
| 0.747
|
The rsks phosphorylate the trascription factor creb at serine 133 to promote cell survival.
|
SIGNOR-72117
|
P53350
|
Q9Y2T1
| 1
|
phosphorylation
|
up-regulates activity
| 0.486
|
Plk1 phosphorylates axin2 at Ser311.
|
SIGNOR-277180
|
P10909
|
Q86TM6
| 0
|
polyubiquitination
|
down-regulates quantity by destabilization
| 0.32
|
We also report that the ER-associated ubiquitin ligase Hrd1/synoviolin can interact with, and ubiquitinate clusterin. The fact that cleaved endogenous clusterin appears, under certain conditions, to be subject to polyubiquitination (Figure 2C) and proteasomal degradation (1, 2) strongly suggests that it passed through the secretory pathway before reaching the cytosol.
|
SIGNOR-272629
|
P35070
|
O14672
| 0
|
cleavage
|
up-regulates activity
| 0.372
|
Like ADAM17, ADAM10 has also been implicated in the activation of specific EGFR ligands, especially EGF and betacellulin
|
SIGNOR-259839
|
P53350
|
Q8N137
| 1
|
phosphorylation
|
up-regulates activity
| 0.324
|
However, unlike NEK2, PLK1 phosphorylation enhances the microtubule stabilizing activity of centrobin [22].|PLK1 phosphorylation of centrobin is critical for bipolar spindle formation.
|
SIGNOR-279551
|
P55075
|
P40426
| 0
|
transcriptional regulation
|
down-regulates quantity by repression
| 0.2
|
Our results in ES cells suggest that Engrailed inhibits Fgf8 expression in the absence of Pbx1. We identified single Engrailed- and Pbx-binding sites in the Fgf8 intron that inhibit expression of Fgf8 in mouse ES cells, but that together can allow full Fgf8 expression. Our data support the model that Engrailed heterodimerized with Pbx might activate transcription, while Engrailed or Pbx proteins alone might repress transcription
|
SIGNOR-265779
|
P18846
|
Q13315
| 0
|
phosphorylation
|
up-regulates activity
| 0.359
|
Exposure to DNA damage further induced ATF1 phosphorylation on Ser-51 by ATM in a manner that required prior phosphorylation of the upstream CK residues.
|
SIGNOR-278909
|
P54829
|
Q13224
| 1
|
dephosphorylation
|
down-regulates activity
| 0.547
|
These previous results, together with the present findings, indicate that STEP61 dephosphorylates the NR2B subunit at its regulatory tyr1472 site, and dephosphorylation of this site leads to internalization of the NMDAR complex from neuronal surface membranes.
|
SIGNOR-265744
|
Q86Y07
|
Q96EV8
| 1
|
phosphorylation
|
down-regulates quantity by destabilization
| 0.2
|
We show that VRK2 phosphorylates Ser 297 and Ser 299 of dysbindin using in vitro kinase assay. In addition, we found that VRK2-mediated phosphorylation of dysbindin enhanced ubiquitination of dysbindin and consequently resulted in the decrease in its protein stability through western blotting.
|
SIGNOR-277403
|
Q14289
|
P49023
| 1
|
phosphorylation
|
down-regulates quantity by destabilization
| 0.94
|
P130Cas and paxillin can be phosphorylated by Fak or Pyk2, and bind directly to these kinases.
|
SIGNOR-279272
|
Q13164
|
P43354
| 1
|
phosphorylation
|
up-regulates activity
| 0.2
|
Activation of MEK, which in turns activates ERK5, does enhance the ERK5 induced nurr1 activity, while no increase is observed in the presence of a dn MEK5 or of the unphosphorylated ERK5 AEF, in which amino acids phosphorylated by MEK5 are mutated.|The A/B domain of nurr1 is highly phosphorylated in the presence of ERK5 and mutations of two amino acids in this same domain decrease significantly the ERK5 mediated nurr1 transcriptional response.|These data would suggest once again that the basal activity of ERK5 is responsible for the phosphorylation of nurr1.|As shown in XREF_FIG, nurr1 A/B domain was significantly phosphorylated by ERK5, while the GST protein alone was not a substrate for this kinase.
|
SIGNOR-279215
|
O14757
|
Q9UKI8
| 1
|
phosphorylation
|
down-regulates
| 0.431
|
Chk1 phosphorylates tlk1 on serine 695 (s695) these findings identify an unprecedented functional co- operation between atm and chk1 in propagation of a checkpoint response during s phase and suggest that, through transient inhibition of tlk kinases, the atm_chk1_tlk pathway may regulate processes involved in chromatin assembly.
|
SIGNOR-99653
|
Q16539
|
Q9BY84
| 0
|
dephosphorylation
|
down-regulates
| 0.805
|
Mkp-7 binds to and inactivates p38 mapk and jnk/sapk, but not erk inhibited by dual specificity phosphatases, such as dusp1, dusp10, and dusp16(uniprot)
|
SIGNOR-108233
|
Q99801
|
P53671
| 0
|
phosphorylation
|
down-regulates activity
| 0.2
|
LIMK2 also downregulates NKX3.1 mRNA levels.|While WT-NKX3.1 was efficiently phosphorylated, the S185A mutant showed no phosphorylation ( xref A), confirming that LIMK2 only phosphorylates the S185 site in NKX3.1.
|
SIGNOR-278951
|
P20393
|
P49841
| 0
|
phosphorylation
|
up-regulates
| 0.282
|
We show here that gsk3beta phosphorylates and stabilizes the orphan nuclear receptor rev-erbalpha, a negative component of the circadian clock.
|
SIGNOR-144570
|
Q9H1A4
|
P06493
| 0
|
phosphorylation
|
up-regulates
| 0.592
|
Apc activation is thought to depend on apc phosphorylation and cdc20 binding. We have identified 43 phospho_sites on apc of which at least 34 are mitosis specific. Of these, 32 sites are clustered in parts of apc1 and the tetratricopeptide repeat (tpr) subunits cdc27, cdc16, cdc23 and apc7. In vitro, at least 15 of the mitotic phospho_sites can be generated by cyclin_dependent kinase 1 (cdk1), and 3 by polo_like kinase 1 (plk1). Apc phosphorylation by cdk1, but not by plk1, is sufficient for increased cdc20 binding and apc activation
|
SIGNOR-119705
|
Q13131
|
Q16875
| 1
|
phosphorylation
|
up-regulates
| 0.399
|
Ipfk-2 was phosphorylated on the homologous serine (ser-461) and activated by ampk in vitro.
|
SIGNOR-89760
|
O75410
|
Q9UQB9
| 0
|
phosphorylation
|
up-regulates activity
| 0.399
|
Aurora-C interacts with and phosphorylates the transforming acidic coiled-coil 1 protein. The results demonstrated that TACC1 is phosphorylated by Aurora-C on a serine at position 228. although the patho-physiological meaning of TACC1 phosphorylation by Aurora-C in normal and in malignant somatic cells remains to be fully investigated, our observations suggest that Aurora-C has a role in the later stage of mitosis, when an interaction with TACC1 may be relevant for the correct progression of the cell cycle.
|
SIGNOR-262663
|
Q9UBN7
|
P27361
| 0
|
phosphorylation
|
up-regulates
| 0.426
|
Histone deacetylase 6 (hdac6) is well known for its ability to promote cell migrationextracellular signal-regulated kinase (erk) phosphorylates histone deacetylase 6 (hdac6) at serine 1035 to stimulate cell migrationwe have identified two novel erk-mediated phosphorylation sites: threonine 1031 and serine 1035 in hdac6. Both sites were phosphorylated by erk1
|
SIGNOR-202702
|
P10275
|
P50613
| 0
|
phosphorylation
|
down-regulates
| 0.377
|
Here, we show that the transcription factor tfiih, via its cdk7 kinase, phosphorylates the androgen receptor (ar) at position ar/s515. Strikingly, this phosphorylation is a key step for an accurate transactivation that includes the cyclic recruitment of the transcription machinery, the mdm2 e3 ligase, the subsequent ubiquitination of ar at the promoter of target genes and its degradation by the proteasome machinery
|
SIGNOR-170599
|
P45983
|
Q13363
| 1
|
phosphorylation
|
down-regulates
| 0.358
|
In this study, we found that c-jun nh2-terminal kinase 1 activation triggered ctbp phosphorylation on ser-422 and subsequent degradation,
|
SIGNOR-149721
|
P07197
|
Q00535
| 0
|
phosphorylation
|
down-regulates quantity
| 0.42
|
Converse to the effect of PKA overexpression, overexpression of CDK5 and its activator, p35, decreased the association between spinophilin and NF-M as well as the expression of NF-M.|Moreover, CDK5 phosphorylates NF-M [ xref ], and this was also apparent in our data, given a dramatic molecular weight shift in the NF-M band following CDK5 overexpression.
|
SIGNOR-279683
|
Q16649
|
O15534
| 1
|
transcriptional regulation
|
down-regulates quantity by repression
| 0.346
|
E4BP4, a basic leucine zipper transcription factor, contains a DNA-binding domain closely related to DBP, HLF, and TEF, which are PAR proteins. Here, we show that the phase of e4bp4 mRNA rhythm is opposite to that of the dbp, hlf, and tef rhythms in the suprachiasmatic nucleus (SCN), the mammalian circadian center, and the liver. The protein levels of E4BP4 and DBP also fluctuate in almost the opposite phase. All PAR proteins activate, whereas E4BP4 suppresses the mPer1 promoter through the same sequence
|
SIGNOR-268056
|
P48735
|
P24752
| 0
|
acetylation
|
down-regulates activity
| 0.287
|
Mitochondrial acetyltransferase ACAT1 and deacetylase SIRT3 are responsible for acetylation and deacetylation, respectively, at K413 of mIDH2|K413 acetylation inhibits mIDH2 by simultaneously attenuating dimer formation from monomers and destabilizing dimers for conversion to monomers
|
SIGNOR-267627
|
O43683
|
P40763
| 1
|
phosphorylation
|
up-regulates activity
| 0.251
|
This study showed that the BUB1 kinase drives the progression and proliferation of BCa by regulating the transcriptional activation of STAT3 signaling and may be an attractive candidate for therapeutic targeting in BCa.|We further identified through a series of molecular and cell biological approaches that BUB1 interacted directly with STAT3 and mediated the phosphorylation of STAT3 at Ser727.
|
SIGNOR-280198
|
P38936
|
P01106
| 0
|
transcriptional regulation
|
down-regulates quantity by repression
| 0.779
|
C-myc also directly represses transcription of cdk kinase inhibitors including p27kip1, p21cip1, p15ink4b and p16ink4a
|
SIGNOR-102740
|
O15111
|
P06748
| 1
|
phosphorylation
|
up-regulates activity
| 0.2
|
S125A and a delta form lacking the aa 119-195 region completely abolished NPM phosphorylation by IKKalpha (XREF_FIG), suggesting that IKKalpha phosphorylates S125 of NPM.|We found that TNFalpha treatment induced IKKalpha phosphorylation and increased NPM hexamers, which were correlated with increased NPM phosphorylation (XREF_FIG).
|
SIGNOR-279405
|
Q9NQU5
|
O43426
| 1
|
phosphorylation
|
up-regulates activity
| 0.2
|
We identified two novel Pak5 substrates, Pacsin1 and Synaptojanin1, proteins that directly interact with one another to regulate synaptic vesicle endocytosis and recycling. Pacsin1 and Synaptojanin1 were phosphorylated by Pak5 and the other group II Paks in vitro, and Pak5 phosphorylation promoted Pacsin1-Synaptojanin1 binding both in vitro and in vivo.
|
SIGNOR-263022
|
P49757
|
P46531
| 1
|
ubiquitination
|
down-regulates quantity by destabilization
| 0.798
|
Mammalian numb proteins promote notch1 receptor ubiquitination and degradation of the notch1 intracellular domain
|
SIGNOR-99762
|
Q05655
|
P11413
| 1
|
phosphorylation
|
up-regulates
| 0.2
|
A pkc activator, significantly increased g6pd phosphorylation and activity, whereas single (s210a, t266a) and double (s210a/t266a) mutations at sites flanking the g6pd active site significantly inhibited phosphorylation, shifted the isoelectric point, and reduced enzyme activity.
|
SIGNOR-167053
|
Q9UIC8
|
P62714
| 1
|
methylation
|
up-regulates activity
| 0.661
|
Methylation of the carboxy-terminal Leu309 in a conserved TPDYFL309 motif of the C subunit has been shown to enhance the affinity of the PP2A core enzyme for some, but not all, regulatory subunits |The PP2A core enzyme was methylated by a PP2A-specific leucine carboxyl methyltransferase (LCMT1)
|
SIGNOR-265751
|
P40763
|
P29597
| 0
|
phosphorylation
|
up-regulates
| 0.687
|
Since Jak-STAT pathway primarily activated in IL-15-me- diated cell proliferation, we tested whether it is also participates in IL-15-mediated proliferation of FAPs. Interestingly, we found the expression of phospho-Jak3 and phospho-Tyk2, as well as their downstream, phospho- STAT3 and phospho-STAT5, was significantly upregulated
|
SIGNOR-256255
|
Q14596
|
P49840
| 0
|
phosphorylation
|
down-regulates activity
| 0.322
|
The autophagy receptor NBR1 (neighbor of BRCA1 gene 1) binds UB/ubiquitin and the autophagosome-conjugated MAP1LC3/LC3 (microtubule-associated protein 1 light chain 3) proteins, thereby ensuring ubiquitinated protein degradation|Here we show that NBR1 is a substrate of GSK3. NBR1 phosphorylation by GSK3 at Thr586 prevents the aggregation of ubiquitinated proteins and their selective autophagic degradation.
|
SIGNOR-261794
|
P63104
|
P17612
| 0
|
phosphorylation
|
down-regulates activity
| 0.566
|
Phosphorylation by pka leads to modulation of 14-3-3zeta dimerization and affect its interaction with partner proteins. Substitution of ser58 to ala completely abolished phosphorylation of 14-3-3zeta by pka.
|
SIGNOR-143373
|
P20823
|
Q12864
| 1
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.313
|
The present study aims to identify the transcription factors which interact and regulate CDH17 promoter activity that might contribute to the up-regulation of CDH17 gene in human HCC|we identified hepatic nuclear factor 1α (HNF1α) and caudal-related homeobox 2 (CDX2) binding sites at the proximal promoter region which modulate the CDH17 promoter activities in two HCC cell lines (Hep3B and MHCC97L)
|
SIGNOR-253970
|
Q9UJV3
|
Q5S007
| 1
|
ubiquitination
|
down-regulates quantity by destabilization
| 0.2
|
The E3 ligase TRIM1 ubiquitinates LRRK2 and controls its localization, degradation, and toxicity.
|
SIGNOR-278763
|
P15336
|
P59595
| 0
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.2
|
The transcription factors c-Fos, FosB, CREB-1, and ATF2 were all activated by the addition of SARS-CoV N protein to the sample well
|
SIGNOR-260727
|
Q96KB5
|
Q96EP1
| 0
|
polyubiquitination
|
down-regulates quantity by destabilization
| 0.346
|
CHFR ubiquitinates and degrades TOPK. Our in vivo ubiquitination assays revealed that the polyubiquitination of TOPK occurs only in the presence of full length CHFR but not with the ΔRING or Δcysteine-rich domain deletion mutants (Fig. 2a).
|
SIGNOR-271471
|
P04637
|
Q96S44
| 0
|
phosphorylation
|
up-regulates
| 0.76
|
The intrinsic transcriptional activity of p53 was up-regulated by a transient transfection of prpk to cos-7 cells. Prpk was shown to bind to p53 and to phosphorylate p53 at ser-15.
|
SIGNOR-157471
|
Q9GZV5
|
P49841
| 0
|
phosphorylation
|
down-regulates quantity by destabilization
| 0.2
|
GSK3 destabilizes TAZ. TAZS58A/S62A but not the TAZ S66A mutant diminished phos- phorylation by GSK3 , suggesting that Ser-58 and Ser-62 are important for GSK3 phosphorylation, whereas the Ser-66 is not (Fig. 4D).
|
SIGNOR-277646
|
Q99683
|
P38936
| 1
|
phosphorylation
|
up-regulates
| 0.589
|
P21cip1 is phosphorylated in vitro by both ask1 and jnk1 at s98. /phosphorylation of p21cip1 at s98, which in vivo appears to be regulated by ask1, may therefore mediate negative feedback in the ask1 signaling pathway.
|
SIGNOR-153440
|
P04792
|
Q13976
| 0
|
phosphorylation
|
down-regulates
| 0.274
|
Purified pkg isoforms ia, ib, and ii all caused incorporation of phosphate in recombinant hsp27 at ser-78, ser-82, and thr-143, but not ser-15.These Studies indicate that hsp27 is a genuine substrate for pkg and that pkg may mediate inhibition of platelet aggregation through phosphorylation of hsp27 and subsequent prevent of actin polymerization
|
SIGNOR-186784
|
P41279
|
P31749
| 0
|
phosphorylation
|
up-regulates activity
| 0.558
|
Akt-dependent phosphorylation of Cot occurs exclusively on serines 400 and 413. Akt to phosphorylate Cot at two sites in the carboxy-terminal domain, at least one of which may promote binding of substrates or coactivators to Cot, or alternatively may relieve binding of a negative regulator.
|
SIGNOR-252572
|
P25098
|
P17252
| 0
|
phosphorylation
|
up-regulates activity
| 0.2
|
Phosphorylation of GRK2 by protein kinase C abolishes its inhibition by calmodulin. In vitro, GRK2 was preferentially phosphorylated by PKC isoforms alpha, gamma, and delta. Two-dimensional peptide mapping of PKCalpha-phosphorylated GRK2 showed a single site of phosphorylation, which was identified as serine 29 by HPLC-MS. A S29A mutant of GRK2 was not phosphorylated by PKC in vitro and showed no phorbol ester-stimulated phosphorylation when transfected into human embryonic kidney (HEK)293 cells.
|
SIGNOR-249058
|
Q9Y251
|
P18146
| 0
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.37
|
Promoter CpG hypomethylation and transcription factor EGR1 hyperactivate heparanase expression in bladder cancer.
|
SIGNOR-254267
|
Q9UKX7
|
P28482
| 0
|
phosphorylation
|
down-regulates activity
| 0.2
|
Erk phosphorylates nup50 at ser221 and ser315 erk phosphorylation of the fg repeat region of nup50 reduced its affinity for importin-beta family proteins, importin-beta and transportin.
|
SIGNOR-188135
|
Q12913
|
P27361
| 1
|
dephosphorylation
|
down-regulates activity
| 0.459
|
Tumor suppressor density-enhanced phosphatase-1 (DEP-1) inhibits the RAS pathway by direct dephosphorylation of ERK1/2 kinases|Pulldown and in vitro dephosphorylation assays confirmed our prediction and demonstrated an overall specificity of DEP-1 in targeting the phosphorylated tyrosine 204 of ERK1/2.
|
SIGNOR-248707
|
Q9UQL6
|
Q15139
| 0
|
phosphorylation
|
down-regulates activity
| 0.516
|
Here, we demonstrate that signaling by protein kinase C (PKC) is sufficient and, in some cases, necessary to drive nuclear export of class II HDAC5 in cardiomyocytes.
|
SIGNOR-249270
|
P04637
|
Q93009
| 0
|
deubiquitination
|
up-regulates
| 0.741
|
Hausp counteracts the destabilizing effect of mdm2 by direct deubiquitination of p53.
|
SIGNOR-139456
|
O43683
|
P33981
| 0
|
phosphorylation
|
up-regulates activity
| 0.695
|
After Cdk1 phosphorylates Bub1 S459, Mps1 then phosphorylates Bub1 T461 (b).
|
SIGNOR-278255
|
Q13153
|
Q92974
| 1
|
phosphorylation
|
down-regulates
| 0.353
|
We identify gef-h1 as a binding target and substrate for p21-activated kinase 1 (pak1), we show that phosphorylation of gef-h1 at ser(885) by pak1 induces 14-3-3 binding to the exchange factor and relocation of 14-3-3 to microtubules.
|
SIGNOR-187573
|
Q96EP1
|
P09874
| 1
|
polyubiquitination
|
down-regulates quantity by destabilization
| 0.427
|
Here, we show that checkpoint with Forkhead-associated (FHA) and RING finger domain protein (CHFR), an E3 ubiquitin ligase, is recruited to DSBs by poly(ADP-ribose) (PAR). Moreover, CHFR ubiquitinates PAR polymerase 1 (PARP1) and regulates chromatin-associated PARP1 in vivo. Moreover, the poly-ubiquitin chain on PARP1 could be recognized by both anti-K48 and K63-linked poly-ubiquitin chain antibodies, suggesting that CHFR mediates a mixed poly-ubiquitin chain linkage on PARP1. With MG132 treatment, ubiquitinated PARP1 was significantly accumulated (Figure 4D), suggesting that the ubiquitination of PARP1 is likely involved in protein degradation. Consistently, we found that following DNA damage, PARP1 quickly dissociated from the chromatin in the wild-type cells (Figure 4F). However, in the Chfr−/− cells, the dissociation of PARP1 from the chromatin was significantly delayed.
|
SIGNOR-271470
|
Q99683
|
P52564
| 1
|
phosphorylation
|
up-regulates activity
| 0.613
|
A MAP kinase kinase kinase (MAPKKK), termed ASK1, was identified that activated two different subgroups of MAP kinase kinases (MAPKK), SEK1 (or MKK4) and MKK3/MAPKK6 (or MKK6), which in turn activated stress-activated protein kinase (SAPK, also known as JNK; c-Jun amino-terminal kinase) and p38 subgroups of MAP kinases, respectively.
|
SIGNOR-45353
|
O94856
|
P16157
| 1
|
relocalization
|
up-regulates quantity
| 0.685
|
Neurofascin, L1, NrCAM, NgCAM, and neuroglian are membrane-spanning cell adhesion molecules with conserved cytoplasmic domains that are believed to play important roles in development of the nervous system. This report presents biochemical evidence that the cytoplasmic domains of these molecules associate directly with ankyrins, a family of spectrin-binding proteins located on the cytoplasmic surface of specialized plasma membrane domains.
|
SIGNOR-266718
|
P22455
|
Q8WU20
| 1
|
phosphorylation
|
up-regulates activity
| 0.685
|
In this report, we demonstrate that FGF stimulation induces tyrosine phosphorylation of a novel lipid anchored docking protein, termed FRS2, that forms a complex with Grb2/Sos, thus linking FGF-receptor activation to the Ras/MAPK signaling pathway.
|
SIGNOR-242661
|
P05067
|
O60260
| 0
|
ubiquitination
|
down-regulates quantity
| 0.2
|
Similarly, in transgenic AD mice models, lentiviral parkin expression ubiquitinates Abeta to reduce its intracellular levels while preventing plaque deposition, and this is associated with induction of beclin dependent autophagy .|Thus, parkin reduces Abeta levels by enhancing both UPS- and autophagy dependent clearance of Abeta.
|
SIGNOR-278709
|
Q13177
|
P35240
| 1
|
phosphorylation
|
down-regulates
| 0.512
|
Merlin contains a c-terminal serine 518, which is phosphorylated both by p21-activated kinase (pak) and protein kinase a (pka) (shaw et al., 2001;kissil et al., 2002;xiao et al., 2002;alfthan et al., 2004). Phosphorylation at this site is predicted to result in a more open conformation incapable of inhibiting cell growth,
|
SIGNOR-159768
|
P04637
|
P78527
| 0
|
phosphorylation
|
up-regulates
| 0.793
|
We demonstrate that phosphorylation of p53 at serines 15 and 37 impairs the ability of mdm2 to inhibit p53-dependent transactivation. We present evidence that these effects are most likely due to a conformational change induced upon phosphorylation of p53. Our studies provide a plausible mechanism by which the induction of p53 can be modulated by dna-pk (or other protein kinases with similar specificity) in response to dna damage.
|
SIGNOR-53030
|
P09619
|
Q12913
| 0
|
dephosphorylation
|
down-regulates activity
| 0.582
|
Primary sequence determinants responsible for site-selective dephosphorylation of the PDGF beta-receptor by the receptor-like protein tyrosine phosphatase DEP-1|DEP-1 dephosphorylation of original and chimeric phospho-peptides spanning the preferred pY1021
|
SIGNOR-248704
|
P42574
|
Q13043
| 1
|
cleavage
|
up-regulates activity
| 0.617
|
In response to apoptotic stimuli, caspase cleavage of mst1 occurs at asp-326 and asp-349, resulting in the separation of its n-terminal kinase domain from the nes-containing c-terminal domain. Thus, caspase cleavage of mst1 serves two purposes: one is activation of mst1 kinase activity and the other is translocation of mst1 into the nucleus.
|
SIGNOR-109878
|
Q71U36
|
Q5SQI0
| 0
|
acetylation
|
up-regulates quantity by stabilization
| 0.268
|
Alpha-Tubulin acetyltransferase (alphaTAT1) is the major α-tubulin lysine-40 (K40) acetyltransferase in mammals, nematodes, and protozoa, and its activity plays a conserved role in several microtubule-based processes.|The tubulin subunits of microtubules are acetylated, and lysine-40 (K40) of the alpha-tubulin subunit has been identified as an important conserved site of microtubule acetylation (6–8). This modification is considered a hallmark of stable, long-lived microtubules
|
SIGNOR-272251
|
P49841
|
O15294
| 1
|
phosphorylation
|
up-regulates activity
| 0.518
|
But OGT activity is modulated by GSK3beta (XREF_FIG) and GSK3beta activity is known to oscillate through Ser9 phoshorylation.|Here, we found that OGT is phosphorylated at serines 3 or 4 by GSK3beta and that O GlcNAcylation of OGT also occurs on the same or neighboring serine residues, suggesting interacting phosphorylation and O GlcNAcylation events on OGT itself.
|
SIGNOR-279528
|
Q9Y243
|
P24666
| 0
|
dephosphorylation
|
down-regulates activity
| 0.2
|
Reduction in the levels of both LMW-PTP isoforms in vitro and in vivo increased tyrosine phosphorylation of IR and AktSer473 and increased IRS-1- and IRS-2-associated PI3-K activities in both liver and fat.|Activated PI3-K stimulates Akt (or protein kinase B) that in turn phosphorylates and inactivates glycogen synthase kinase-3
|
SIGNOR-248457
|
O00311
|
Q9HAW4
| 1
|
phosphorylation
|
up-regulates activity
| 0.742
|
Cdc7 phosphorylates Claspin in a manner dependent on AP and inhibits N\u2013C interaction.|Thus, Cdc7-ASK may activate DNA and PCNA bindings of Claspin through AP-mediated phosphorylation.
|
SIGNOR-279360
|
Q9NV92
|
P46934
| 1
|
relocalization
|
down-regulates activity
| 0.568
|
Ndfip1 is primarily localized in the Golgi apparatus where it recruits Nedd4-2 to mediate the degradation of mature hERG proteins during channel trafficking to the plasma membrane. Although Ndfip2 directs Nedd4-2 to the Golgi apparatus, it also recruits Nedd4-2 to the multivesicular bodies (MVBs), which may impair MVB function and impede the degradation of mature hERG proteins mediated by Nedd4-2.
|
SIGNOR-260995
|
P08648
|
P31249
| 0
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.25
|
The homeobox transcription factor Hox D3 promotes integrin alpha5beta1 expression and function during angiogenesis.
|
SIGNOR-261649
|
Q06710
|
P01266
| 1
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.458
|
The transcription factor Pax8 plays an important role in the expression of the differentiated phenotype of thyroid follicular cells. It has recently been shown that Pax8 is necessary for thyroglobulin (Tg) gene expression.
|
SIGNOR-251998
|
O75582
|
Q13541
| 1
|
phosphorylation
|
down-regulates activity
| 0.671
|
In response to UV-B irradiation, the translation factor 4E-BP1 (eukaryotic initiation factor 4E [eIF4E]-binding protein 1) was phosphorylated at Thr36, Thr45, Ser64 and Thr69. Using either p38 MAPK inhibitors or the MSK inhibitor H89, UV-B-irradiation-induced phosphorylation was blocked [43]. 4E-BP1 binds to eIF4E in resting cells to prevent formation of a functional eIF4F complex, which is essential for cap-dependent initiation of translation. Phosphorylation of 4E-BP1 leads to dissociation from eIF4E
|
SIGNOR-262992
|
Q9BQE3
|
Q8NG68
| 0
|
tyrosination
|
down-regulates
| 0.473
|
Tubulin tyrosine ligase (ttl) adds a c-terminal tyr to __tubulin as part of a tyrosination/detyrosination cycle present in most eukaryotic cells. / ttl inhibits spontaneous tubulin polymerization
|
SIGNOR-176918
|
P06239
|
Q9H4E7
| 1
|
phosphorylation
|
up-regulates activity
| 0.5
|
In vitro kinase assays indeed demonstrated that Lck can phosphorylate wild-type IBP but not the Y210F mutant. IBP Binds PI(3,4,5)P3 upon Phosphorylation by Lck
|
SIGNOR-251372
|
P17480
|
P01106
| 0
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.356
|
MAD1 and c-MYC regulate UBF and rDNA transcription during granulocyte differentiation|MAD1 repressed and c-MYC activated rDNA transcription in nuclear run-on assays. Repression of rDNA transcription by MAD1 was associated with its ability to interact directly with the promoter of upstream binding factor (UBF), an rDNA regulatory factor. Conversely, c-MYC activated transcription from the UBF promoter.
|
SIGNOR-269644
|
Q13304
|
P25098
| 0
|
phosphorylation
|
down-regulates activity
| 0.2
|
As depicted in Fig. 8 A and B, GRK2 silencing resulted in up-regulation of GPR17 and down-regulation of the mature markers CNPase and MBP, indicating a shift of cells toward a less differentiated stage.Having established that, in primary cultured OPCs, LTD 4 mediated desensitization of GPR17 through the primary recruitment of GRK2, we then asked whether GRK2 pharmacological inhibition had any effects on cysLT promoted cell maturation.|These data demonstrate that LTD 4 -induced GPR17 phosphorylation is preferentially mediated by GRK2 and only partially by GRK5, whereas UDP-glucose-mediated receptor phosphorylation exclusively requires the GRK5 isoform.We examined the involvement of GRK2 and GRK5 in agonist induced desensitization of GPR17.
|
SIGNOR-279999
|
P67775
|
P24071
| 1
|
dephosphorylation
|
up-regulates activity
| 0.323
|
Furthermore, FcalphaRI activation is induced by protein phosphatase 2A (PP2A) after it dephosphorylates a single serine residue (S263) in the FcalphaRI intracellular tail
|
SIGNOR-264858
|
Q12857
|
Q9HD90
| 1
|
transcriptional regulation
|
up-regulates quantity
| 0.2
|
For example, within the NFI targetome, we identified 6 collagen genes, 13 genes encoding potassium channel or glutamate receptor subunits and a range of factors related to axon guidance (e.g. Slit1, Robo1, Epha4, Epha5, Epha8)
|
SIGNOR-268891
|
Q8NEV1
|
Q99250
| 1
|
phosphorylation
|
up-regulates activity
| 0.2
|
We found that the ankyrin-binding motif of Na(v)1.2 that determines channel concentration at the AIS depends on a glutamate residue (E1111), but also on several serine residues (S1112, S1124, and S1126). We showed that phosphorylation of these residues by protein kinase CK2 (CK2) regulates Na(v) channel interaction with ankyrins. | inhibition of CK2 activity reduced sodium channel accumulation at the AIS of neurons. In conclusion, CK2 contributes to sodium channel organization by regulating their interaction with ankyrin G.
|
SIGNOR-275755
|
P10275
|
P49841
| 0
|
phosphorylation
|
down-regulates activity
| 0.649
|
Glycogen synthase kinase-3 beta is involved in the phosphorylation and suppression of androgen receptor activity.|In particular, we showed that glycogen synthase kinase-3 beta phosphorylates the androgen receptor, thereby inhibiting androgen receptor-driven transcription.
|
SIGNOR-279334
|
P15259
|
Q8IXJ6
| 0
|
deacetylation
|
up-regulates activity
| 0.2
|
Here we report that PGAM is acetylated at lysine 100 (K100), an active site residue that is invariably conserved from bacteria, to yeast, plant, and mammals. K100 acetylation is detected in fly, mouse, and human cells and in multiple tissues and decreases PGAM2 activity. The cytosolic protein deacetylase sirtuin 2 (SIRT2) deacetylates and activates PGAM2.
|
SIGNOR-266518
|
P27361
|
Q02447
| 1
|
phosphorylation
|
up-regulates
| 0.299
|
Here, we show that sp3, which, as sp1, belongs to the gc-rich binding transcription factor family, is also phosphorylated by erk in vitro on serine 73.
|
SIGNOR-157276
|
P52564
|
Q15759
| 1
|
phosphorylation
|
up-regulates
| 0.702
|
The p38 mapkinasekinasemkk6 is identified as a common activator of p38 alpha, p38 beta 2, and p38 gamma mapkinaseisoforms.
|
SIGNOR-54947
|
Q9Y6X2
|
P40763
| 1
|
sumoylation
|
down-regulates
| 0.731
|
Stat3 mediated signaling pathways can be inhibited by pias3 (protein inhibitor of activated stat3), which was recently found to regulate protein stability and function by its sumo (small-ubiquitin like modifiers) ligase activity in promoting sumoylation of important nuclear proteins.
|
SIGNOR-124723
|
P01178-PRO_0000020495
|
P16519
| 0
|
cleavage
|
up-regulates quantity
| 0.2
|
Oxytocin-extended form is further cleaved by enzymatic activity to yield the nine-amino-acid active peptide, OT. The proteolysis may involve several pro-hormone convertases, convertase 2 (PC2) (20p11-1-11.2) and convertase 5 (PC5) (9q21.3) (Gabreels et al 1998). Both enzymes are found in OT neurosecretory vesicles and are a part of a family of subtilisen/kexinlike convertases (Seidah et al 1994). It is a product of the OT gene located at human gene locus 20p13 (Rao et al 1992). The processing cascade results in the production of neurophysin I and OT extended form (OT-X), which is OT with a C-terminal, three-amino-acid extension.
|
SIGNOR-270335
|
Q15154
|
P41208
| 1
|
relocalization
|
up-regulates
| 0.531
|
Rna silencing of pcm-1 leads to reduced assembly of centrin, pericentrin, and ninein at the centrosome
|
SIGNOR-94990
|
P08581
|
P46940
| 1
|
phosphorylation
|
up-regulates activity
| 0.272
|
IQGAP1 was phosphorylated exclusively on Tyr-1510 under conditions with enhanced MET or c-Src signaling, including in human lung cancer cell lines. This phosphorylation was significantly reduced by chemical inhibitors of MET or c-Src or by siRNA-mediated knockdown of MET.
|
SIGNOR-277532
|
Q53ET0
|
Q9Y4K3
| 0
|
ubiquitination
|
down-regulates quantity
| 0.307
|
Consistently, TRAF6 reduced G6pase gene expression or reporter activity induced by wild-type CRTC1 and CRTC2 but not TRAF6-interaction-defective CRTC1 and CRTC2 (XREF_FIG and XREF_SUPPLEMENTARY).|Indeed, TRAF6, the E3 ubiquitin ligase activated by IL-1beta associates with and ubiquitinates CRTC2.
|
SIGNOR-278725
|
P11362
|
P00338
| 1
|
phosphorylation
|
up-regulates
| 0.366
|
We found that the oncogenic receptor tyrosine kinase fgfr1 directly phosphorylates ldh-a. Phosphorylation at y10 and y83 enhances ldh-a activity by enhancing the formation of active, tetrameric ldh-a and the binding of ldh-a substrate nadh, respectively.
|
SIGNOR-176730
|
P60709
|
P12277
| 0
|
relocalization
|
up-regulates quantity
| 0.292
|
In summary, data presented here strongly suggest that locally generated ATP is an important regulator for actin-based cytoskeletal dynamics involved in cell extension and motility and that CK-B is a controlling enzyme in the compartmentalization of ATP availability. CK-B co-localizes with cortical actin and facilitates spreading of astrocytes
|
SIGNOR-265791
|
Q13285
|
P11511
| 1
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.479
|
The in vivo existence of an SF-1 corepressor complex consisting of DAX-1, RNF31, and SMRT at the steroidogenic promoters of the human StAR and CYP19 genes. We demonstrate that RNF31 is necessary for the stable association of the DAX-1 corepressor complex with chromatin-bound SF-1, thereby inhibiting the recruitment of coactivators and Pol II and controlling basal transcription levels of SF-1 target genes.
|
SIGNOR-271787
|
Q01082
|
P68400
| 0
|
phosphorylation
|
down-regulates
| 0.334
|
We show here that the short c-terminal splice variant of betaii-spectrin (betaiisigma2) is a substrate for phosphorylation. In vitro, protein kinase ck2 phosphorylates ser-2110 and thr-2159 / phosphorylation of ?II?2 C-terminal fragment inhibits its interaction with ?II N-terminal fragment.
|
SIGNOR-150471
|
Q6UUV7
|
P57059
| 0
|
phosphorylation
|
down-regulates
| 0.418
|
These results suggested that sik1 could phosphorylate all torcs and thereby repress their transactivation activities.
|
SIGNOR-147703
|
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