IdA
stringlengths 6
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| IdB
stringlengths 6
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| labels
float64 0
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| mechanism
stringclasses 40
values | effect
stringclasses 10
values | score
float64 0.1
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⌀ | sentence
stringlengths 10
1.63k
⌀ | signor_id
stringlengths 12
14
|
|---|---|---|---|---|---|---|---|
O00762
|
P10275
| 0
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.397
|
The evolution of prostate cancer from an androgen-dependent state (ADPCa) to one that is androgen-independent (AIPCa) marks its lethal progression. The androgen receptor (AR) is essential in both, though its function in AIPCa is poorly understood. We have defined the direct AR-dependent target genes in both AIPCa and ADPCa by generating AR-dependent gene expression profiles and AR cistromes. In contrast to ADPCa, AR selectively up-regulates M-phase cell cycle genes in AIPCa including UBE2C, a gene that inactivates the M-phase checkpoint.
|
SIGNOR-251543
|
P17544
|
O00268
| 0
|
binding
|
down-regulates activity
| 0.397
|
These results not only demonstrate an interaction between ATF7 and TAF4 but also indicate, as in the case of TAF12 (see Figure 3e), that no additional cellular component is required for this binding. They also suggest that TAF4 may interfere with the formation of ATF7TAF12 subcomplexes, thereby inhibiting ATF7-induced transactivation.
|
SIGNOR-225300
|
P38398
|
Q7Z6Z7
| 0
|
ubiquitination
|
down-regulates quantity by destabilization
| 0.397
|
Collectively, these data indicate that HUWE1 targets BRCA1, but not BARD1, for polyubiquitination and degradation.Because HUWE1 promotes BRCA1 ubiquitination and degradation, we wondered whether it might contribute to the reduced BRCA1 protein levels in sporadic breast cancer.
|
SIGNOR-278583
|
P03372
|
P51948
| 0
|
phosphorylation
|
up-regulates activity
| 0.397
|
Human Estrogen Receptor α Is Phosphorylated at Serine 118 In Vivo by Cdk7
|
SIGNOR-260837
|
Q8IXJ6
|
Q00535
| 0
|
phosphorylation
|
up-regulates activity
| 0.397
|
Cdk5 phosphorylation-induced SIRT2 nuclear translocation promotes the death of dopaminergic neurons in Parkinson's disease.|Moreover, the cyclin-dependent kinase 5 (Cdk5)-mediated phosphorylation of SIRT2 at the Ser331 and Ser335 sites appears to be necessary for such nuclear translocation.
|
SIGNOR-279684
|
Q92793
|
O75177
| 0
|
relocalization
|
up-regulates
| 0.397
|
The calcium-responsive transactivator recruits creb binding protein to nuclear bodies.
|
SIGNOR-129926
|
P84022
|
Q8N6I1
| 0
|
binding
|
down-regulates
| 0.397
|
In this study, we examined the effect of eid-2 on smad-mediated tgf- signaling. Here, we show that eid-2 inhibits tgf- /smad transcriptional responses. Eid-2 interacts constitutively with smad proteins, and most strongly with smad3.
|
SIGNOR-119171
|
P16615
|
Q9UQM7
| 0
|
phosphorylation
|
up-regulates activity
| 0.397
|
SERCA2 and SERCA2 mutants S38A, S167A, and S531A were expressed in HEK-293 cells and tested for phosphorylation with CaM kinase. Mutant S38A was not phosphorylated, while mutants S167A and S531A were phosphorylated, suggesting that Ser38 is the site of CaM kinase phosphorylation in SERCA2. This conclusion was supported by the observation that phosphorylation of SERCA2 and mutants S167A and S531A by CaM kinase increased the Vmax for Ca2+ transport, while the Vmax for Ca2+ transport by mutant S38A was unaffected by exposure to a phosphorylation reaction mix.
|
SIGNOR-250616
|
Q00653
|
Q969H0
| 0
|
binding
|
down-regulates quantity by destabilization
| 0.396
|
Fbxw7α is a member of the F-box family of proteins, which function as the substrate-targeting subunits of SCF (Skp1/Cul1/F-box protein) ubiquitin ligase complexes. Using differential purifications and mass spectrometry, we identified p100, an inhibitor of NF-κB signalling, as an interactor of Fbxw7α. p100 is constitutively targeted in the nucleus for proteasomal degradation by Fbxw7α
|
SIGNOR-272907
|
Q9BQQ3
|
P42574
| 0
|
cleavage
|
up-regulates activity
| 0.396
|
In contrast, Caspase‐3 cleavage of GRASP‐1 releases the C‐terminal fragment, which in turn activates JNK signaling by serving as a scaffold protein
|
SIGNOR-260613
|
O75581
|
P12931
| 0
|
phosphorylation
|
down-regulates activity
| 0.396
|
Both Src and Fer associate with LRP6 and phosphorylate LRP6 directly.|Wnt3a treatment of cells enhances tyrosine phosphorylation of endogenous LRP6 and, mechanistically, Src reduces cell surface LRP6 levels and disrupts LRP6 signalosome formation.
|
SIGNOR-279289
|
Q7LDG7
|
P28482
| 0
|
phosphorylation
|
down-regulates activity
| 0.396
|
ERK2 phosphorylates RasGRP2 at Ser394 located in the linker region implicated in its autoinhibition.
|
SIGNOR-279537
|
Q02556
|
P10914
| 0
|
binding
|
up-regulates activity
| 0.396
|
We found that tyrosine phosphorylated ICSBP activates CYBB and NCF2 transcription, during late myeloid differentiation, by interacting with PU.1, IRF1 and CBP.
|
SIGNOR-222841
|
P49418
|
Q13627
| 0
|
phosphorylation
|
down-regulates
| 0.396
|
Recent studies show that phosphorylation of amphiphysin1 prd by cdk5 inhibited the association of amphiphysin1 with ap-2 in synaptic vesicle endocytosis (7, 8) similar to that by mapk (present report). Cdk5 appears to phosphorylate amphiphysin1 at serines 261, 272, 276, and 285 and threonine 310, located in the prd
|
SIGNOR-126843
|
Q13485
|
Q9UNE7
| 0
|
polyubiquitination
|
down-regulates quantity by destabilization
| 0.396
|
We demonstrate that the coexpression of Smad1 and Smad4 with the CHIP protein results in the degradation of the Smad proteins through a ubiquitin-mediated process.
|
SIGNOR-272947
|
Q01668
|
P17612
| 0
|
phosphorylation
|
up-regulates activity
| 0.396
|
We recently demonstrated that PKA activation led to increased alpha(1D) Ca(2+) channel activity in tsA201 cells by phosphorylation of the channel protein. Western blotting showed that the N terminus and C terminus were phosphorylated. Serines 1743 and 1816, two PKA consensus sites, were phosphorylated by PKA and identified by mass spectrometry.
|
SIGNOR-263109
|
O95475
|
Q04724
| 0
|
binding
|
up-regulates activity
| 0.396
|
Biochemical and mutational analysis shows that the Six domain of both SIX3 and SIX6 strongly interact with the QD domain of TLE1 and AES. TLE1 over-expression induces an enlargement of the eye field and reinforcesSIX3/SIX6 capability of initiating retina formation
|
SIGNOR-234592
|
P15514
|
P19544
| 0
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.396
|
The Wilms Tumor Suppressor WT1 Encodes a Transcriptional Activator of amphiregulin
|
SIGNOR-251745
|
P33032
|
Q8TCY5
| 0
|
binding
|
down-regulates activity
| 0.396
|
We report that MRAP and MRAP2 can interact with all 5 MCRs. This interaction results in MC2R surface expression and signaling. In contrast, MRAP and MRAP2 can reduce MC1R, MC3R, MC4R, and MC5R responsiveness to [Nle4,D-Phe7]alpha-melanocyte-stimulating hormone (NDP-MSH). MRAP and MRAP2 can reduce the surface expression of MC4R and also the signaling of this receptor. we observed a significant decrease in the cell-surface expression of MC4R and MC5R in the presence of MRAP and MRAP2. It is interesting that MRAP and MRAP2 have opposite effects in the modulation of different MCR family members.
|
SIGNOR-252368
|
P53355
|
Q9Y2M5
| 0
|
binding
|
down-regulates quantity by destabilization
| 0.396
|
Here, we identify the BTB-Kelch protein KLHL20 as a negative regulator of DAPK. KLHL20 binds DAPK and Cullin 3 (Cul3) via its Kelch-repeat domain and BTB domain, respectively. The KLHL20-Cul3-ROC1 E3 ligase complex promotes DAPK polyubiquitination, thereby inducing the proteasomal degradation of DAPK.
|
SIGNOR-271960
|
P31269
|
Q15910
| 0
|
transcriptional regulation
|
down-regulates quantity by repression
| 0.396
|
These data support the proposed regulatory impact of particular PRC2-proteins in expression of HOXA9 and HOXA10 in NK/T-cells. In mammalian cells knockdown of PRC2 components EZH2 or PHF1 led to upregulated HOXA gene expression.
|
SIGNOR-260068
|
Q07820
|
Q9Y4K3
| 0
|
ubiquitination
|
up-regulates activity
| 0.396
|
TRAF6 likely directly ubiquitinates MCL-1 since purified TRAF6 promoted the ubiquitination of recombinant GST-MCL-1 and co-expression of Tax with TRAF6 further enhanced MCL-1 ubiquitination .|Therefore, TRAF6 mediated MCL-1 stabilization appears to be a common mechanism of cell survival usurped by both viral and non viral cancers.
|
SIGNOR-278726
|
P46531
|
Q13627
| 0
|
phosphorylation
|
down-regulates
| 0.396
|
Dyrk1a physically interacts with the nicd inducing its phosphorylation in the ankyrin domain, thereby attenuating notch .
|
SIGNOR-185494
|
P09038
|
P09629
| 0
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.396
|
Band shift and cotransfection experiments showed that HOXB7 directly transactivates the hFGF gene through one out of five putative homeodomain binding sites present in its promoter.
|
SIGNOR-261639
|
P01903
|
Q12986
| 0
|
transcriptional regulation
|
down-regulates quantity by repression
| 0.396
|
A novel cysteine-rich sequence-specific DNA-binding protein interacts with the conserved X-box motif of the human major histocompatibility complex class II genes via a repeated Cys-His domain and functions as a transcriptional repressor
|
SIGNOR-266224
|
P10275
|
O15164
| 0
|
binding
|
up-regulates
| 0.396
|
We found that trim24/transcriptional intermediary factor 1alpha (tif1alpha), which is known as a ligand-dependent nuclear receptor co-regulator, interacts with ar and enhances transcriptional activity of ar
|
SIGNOR-189113
|
Q92974
|
Q96SB3
| 0
|
binding
|
up-regulates activity
| 0.396
|
The Rho Family GEF Lfc Interacts with Neurabin and Spinophilin. Neurabin and spinophilin are homologous protein phosphatase 1 and actin binding proteins that regulate dendritic spine function. The results obtained in the present study suggest a mechanism by which neurabin or spinophilin contributes to the organization of the F-actin cytoskeleton in dendritic spines, and in turn to the regulation of spine morphology, via the activity-dependent recruitment of the Rho-specific GEF Lfc
|
SIGNOR-269176
|
P20336
|
Q8WXG6
| 0
|
guanine nucleotide exchange factor
|
up-regulates activity
| 0.396
|
Rab3A, a member of the Rab3 small G protein family, regulates Ca(2+)-dependent exocytosis of neurotransmitter. The cyclical activation and inactivation of Rab3A are essential for the Rab3A action in exocytosis. GDP-Rab3A is activated to GTP-Rab3A by Rab3 GDP/GTP exchange protein (Rab3 GEP), and GTP-Rab3A is inactivated to GDP-Rab3A by Rab3 GTPase-activating protein (Rab3 GAP).
|
SIGNOR-265579
|
P04637
|
O95155
| 0
|
polyubiquitination
|
down-regulates quantity by destabilization
| 0.396
|
We show that ubiquitination factor E4B (UBE4B), an E3 and E4 ubiquitin ligase, physically interacts with p53 and Hdm2 (also known as Mdm2 in mice). UBE4B promotes p53 polyubiquitination and degradation and inhibits p53-dependent transactivation and apoptosis.
|
SIGNOR-271907
|
P01111
|
Q7Z5G4
| 0
|
palmitoylation
|
up-regulates activity
| 0.396
|
Covalent lipid modifications mediate the membrane attachment and biological activity of Ras proteins. All Ras isoforms are farnesylated and carboxyl-methylated at the terminal cysteine; H-Ras and N-Ras are further modified by palmitoylation. Here we report that H- and N-Ras are palmitoylated by a human protein palmitoyltransferase encoded by the ZDHHC9 and GCP16 genes. DHHC9 is an integral membrane protein that contains a DHHC cysteine-rich domain. GCP16 encodes a Golgi-localized membrane protein.
|
SIGNOR-261354
|
P61586
|
Q13618
| 0
|
ubiquitination
|
down-regulates quantity by destabilization
| 0.396
|
BACURDs form ubiquitin ligase complexes, which selectively ubiquitinate RhoA, with Cul3. Our studies reveal a previously unknown mechanism for controlling RhoA degradation and regulating RhoA function in various biological contexts, which involves a Cul3/BACURD ubiquitin ligase complex.
|
SIGNOR-264238
|
Q96SB3
|
Q00535
| 0
|
phosphorylation
|
down-regulates quantity
| 0.396
|
CDK5 decreased the expression of both spinophilin (30%) and neurabin (64%).|This suggests that CDK5 phosphorylation of spinophilin at Ser17 is not responsible for the CDK5 dependent increase in the spinophilin and PP1 association.
|
SIGNOR-279453
|
P42771
|
O14920
| 0
|
phosphorylation
|
down-regulates
| 0.396
|
Ikkbeta specifically binds to p16 and phosphorylates ser8 of p16 phosphorylation at ser8 of p16 brings about a significant loss of its cyclin-dependent kinase (cdk) 4-inhibitory activity
|
SIGNOR-163801
|
Q14739
|
P06493
| 0
|
phosphorylation
|
down-regulates
| 0.396
|
The binding of the nk fragment to chromatin pretreated with an s-phase extract was suppressed by incubation with an m-phase extract. Enzyme inhibitor experiments revealed that multiple kinases participate in the suppression. One of these kinases was shown to be cdc2 experiments involving a mutant nk fragment showed that the phosphorylation of serine 71 by cdc2 kinase is responsible for the suppression.
|
SIGNOR-121335
|
P41594
|
Q02156
| 0
|
phosphorylation
|
up-regulates activity
| 0.396
|
Thus, we showed that it is phosphorylation of Ser-839, not Thr-840, that is absolutely required for the unique Ca2+ oscillations produced by mGluR5 activation. The Thr-840 residue is important only in that it is permissive for the PKC-dependent phosphorylation of Ser-839.
|
SIGNOR-249288
|
P49427
|
P68400
| 0
|
phosphorylation
|
down-regulates activity
| 0.395
|
The ubiquitin-conjugating enzyme, cdc34, has been implicated in the ubiquitination of a number of vertebrate substrates, including p27(kip1), ikappabalpha, wee1, and myod. We show that mammalian cdc34 is a phosphoprotein that is phosphorylated in proliferating cells. Phosphorylation of cdc34 by the associated kinase maps predominantly to residues 203 and 222. Mutation of cdc34 at ck2-targeted residues, ser-203, ser-222, ser-231, thr-233, and ser-236, abolishes the phosphorylation of cdc34 observed in vivo and markedly shifts nuclearly localized cdc34 to the cytoplasm.
|
SIGNOR-110399
|
Q96KB5
|
P12931
| 0
|
phosphorylation
|
up-regulates quantity by stabilization
| 0.395
|
Phosphorylation of TOPK at Y74, Y272 by Src increases the stability of TOPK and promotes tumorigenesis of colon
|
SIGNOR-277217
|
P53671
|
Q5VT25
| 0
|
phosphorylation
|
up-regulates activity
| 0.395
|
These results indicate that mrckalpha phosphorylates and activates lim kinases downstream of cdc42, which in turn regulates the actin cytoskeletal reorganization through the phosphorylation and inactivation of adf/cofilin.
|
SIGNOR-107584
|
Q9Y570
|
Q14012
| 0
|
phosphorylation
|
up-regulates activity
| 0.395
|
CaMKI Is the Upstream Kinase for Phosphorylation of PME-1/Ser15
|
SIGNOR-277827
|
P55210
|
P12931
| 0
|
phosphorylation
|
up-regulates activity
| 0.395
|
Src enhances caspase-7 activity in vitro and in cells.|When all four sites were mutated to phenylalanine, the in vitro kinase assay results showed that phosphorylation of the Mut-caspase-7 protein by Src decreased dramatically compared with Wt-caspase-7, suggesting that these four sites, Tyr58, Tyr151, Tyr229 and Tyr230, are the most important sites of caspase-7 to be phosphorylated by Src (XREF_FIG).
|
SIGNOR-278455
|
P27361
|
P30304
| 0
|
dephosphorylation
|
down-regulates
| 0.395
|
We found that cdc25a physically interacted with and de-phosphorylated phospho-erk both in vitro and in cell culture.
|
SIGNOR-133392
|
P18887
|
P68400
| 0
|
phosphorylation
|
up-regulates
| 0.395
|
Xrcc1 phosphorylation by ck2 is required for its stability and efficient dna repair
|
SIGNOR-165419
|
P62136
|
Q00535
| 0
|
phosphorylation
|
down-regulates activity
| 0.395
|
Pp1 isoforms contain an arg-pro-ile/val-thr-pro-pro-arg sequence near the c terminus, a known site of phosphorylation by cdc/cdk kinases, and phosphorylation attenuates phosphatase activity. Increasing doses of cdk2 resulted in increased phosphorylation of the thr-320 site. Phosphorylation of this site in pp1 corresponded to decreased pp1 activity.
|
SIGNOR-92269
|
P55085
|
P08246
| 0
|
cleavage
|
down-regulates activity
| 0.395
|
PAR1E and PAR2E (10 microM) were incubated in the presence of the different proteases | The enzymes were used at the following concentrations: 0.5 unit/mL thrombin, 2.5 nM trypsin, 20 nM plasmin, 20 nM cathepsin G, 20 nM elastase, 20 nM proteinase 3, and 2 units/mL calpain I and II|Protease-activated receptors (PARs) mediate cell activation after proteolytic cleavage of their extracellular amino terminus.|Mass spectrometry studies of PAR2E predicted activation of PAR2 by trypsin through cleavage at the Arg36-Ser37 site, no effect of thrombin, and inactivation of the receptor by plasmin, calpain and leukocyte elastase, cathepsin G, and proteinase 3
|
SIGNOR-263588
|
Q99683
|
P04049
| 0
|
binding
|
down-regulates
| 0.395
|
Raf-1 interacts with the proapoptotic, stress-activated protein kinase ask1 (apoptosis signal-regulating kinase 1) in vitro and in vivo.
|
SIGNOR-109023
|
Q99683
|
Q13627
| 0
|
phosphorylation
|
up-regulates activity
| 0.395
|
Moreover, Dyrk1A appears to directly phosphorylate the C-terminal domain of ASK1.|The current finding that Dyrk1A enhances the activities of ASK1 and JNK1, it could act as a pro-apoptotic player.
|
SIGNOR-279366
|
Q8N726
|
O15119
| 0
|
transcriptional regulation
|
down-regulates quantity by repression
| 0.395
|
TBX2 and TBX3 function as transcriptional repressors and both have been shown to inhibit myogenesis (Carlson et al, 2002; Zhu et al, 2014). Abnormal expression of TBX2 has been reported in several cancers including breast, pancreas, and melanoma, where it has been shown to drive proliferation (reviewed in Abrahams et al (2010)). As has been previously shown in other cell types, TBX2 was found to induce a downregulation of p14/19ARF and function as a direct repressor of p21 in RMS
|
SIGNOR-249603
|
Q92934
|
Q15418
| 0
|
phosphorylation
|
down-regulates activity
| 0.395
|
We report here that the phosphorylation of BAD at Ser-155 within the BH3 domain is a second phosphorylation-dependent mechanism that inhibits the death-promoting activity of BAD. Protein kinase A, RSK1, and survival factor signaling stimulate phosphorylation of BAD at Ser-155, blocking the binding of BAD to Bcl-XL. RSK1 phosphorylates BAD at both Ser-112 and Ser-155 and rescues BAD-mediated cell death in a manner dependent upon phosphorylation at both sites.
|
SIGNOR-249045
|
O00329
|
Q15303
| 0
|
binding
|
up-regulates
| 0.395
|
Pi3k is the sole binding partner to six tyrosines of erbb3 and one in erbb4.
|
SIGNOR-146885
|
Q9Y6Q9
|
O15111
| 0
|
phosphorylation
|
up-regulates
| 0.395
|
Herein, we report the successful identification of six functional in vivo src-3 phosphorylation sites.
|
SIGNOR-196953
|
Q9UN36
|
O00141
| 0
|
phosphorylation
|
up-regulates
| 0.395
|
Sgk1 phosphorylated ndrg2 at thr330, ser332 and thr348 in vitro. for example, the phosphorylation of thr330 or ser332 by sgk1 may prime ndrg2 for phosphorylation by gsk3 at ser326 and ser328 respectively, for example, the phosphorylation of thr330 or ser332 by sgk1 may prime ndrg2 for phosphorylation by gsk3 at ser326 and ser328 respectively, the phosphorylation of thr348 by sgk1 may prime for phosphorylation at ser344
|
SIGNOR-129676
|
Q9GZM8
|
P60510
| 0
|
dephosphorylation
|
down-regulates activity
| 0.395
|
Protein phosphatase 4 catalytic subunit regulates Cdk1 activity and microtubule organization via NDEL1 dephosphorylation|PP4c selectively dephosphorylates NDEL1 at Cdk1 sites. We also demonstrate that PP4c negatively regulates Cdk1 activity at the centrosome.|We next examined the ability of PP4c to dephosphorylate a Cdk1 phosphorylation site, phospho-T219
|
SIGNOR-248550
|
O43318
|
P49593
| 0
|
dephosphorylation
|
down-regulates activity
| 0.395
|
However, our current work shows that POPX2 can downregulate TAK1 and affect the anti-apoptotic activities of TAK1, implying that silencing POPX2 could facilitate TAK1 activation and will lead to increased cell survival.|We have also demonstrated that POPX2 can directly dephosphorylate TAK1 (XREF_FIG).
|
SIGNOR-277047
|
P07332
|
P15311
| 0
|
relocalization
|
up-regulates
| 0.395
|
The recruitment and the activation of fes to the cell-cell contacts in confluent cells depend on its interaction with ezrin.
|
SIGNOR-159496
|
Q8IXJ6
|
P24941
| 0
|
phosphorylation
|
down-regulates
| 0.395
|
We define ser-331 as the site phosphorylated by cyclin e-cdk2, cyclin a-cdk2, and p35-cdk5 both in vitro and in cells. Importantly, phosphorylation at ser-331 inhibits the catalytic activity of sirt2.
|
SIGNOR-177972
|
P17676
|
P24941
| 0
|
phosphorylation
|
up-regulates
| 0.395
|
Mass spectrometric analysis revealed that cdk2/cyclina phosphorylates c/ebpbeta on thr(188) and is required for phosphorylation (on ser(184) or thr(179)) of c/ebpbeta by gsk3beta and maintenance of dna binding activity.
|
SIGNOR-196372
|
P51397
|
P42345
| 0
|
phosphorylation
|
down-regulates activity
| 0.395
|
A critical step in autophagy induction comprises the inactivation of a key negative regulator of the process, the Ser/Thr kinase mammalian target of rapamycin (mTOR). Here we identify death-associated protein 1 (DAP1) as a novel substrate of mTOR that negatively regulates autophagy. Mapping of the phosphorylation sites and analysis of phosphorylation mutants indicated that DAP1 is functionally silenced in growing cells through mTOR-dependent phosphorylations on Ser3 and Ser51.
|
SIGNOR-259812
|
Q96EB6
|
Q13131
| 0
|
phosphorylation
|
down-regulates activity
| 0.395
|
Previous studies have reported that AMP-activated protein kinase phosphorylates and inactivates SIRT1, resulting in increased p53 acetylation in liver cancer [ xref , xref ].
|
SIGNOR-280076
|
Q9UPY3
|
Q06945
| 0
|
transcriptional regulation
|
up-regulates quantity
| 0.395
|
.... showed that Sox4 positively regulates Dicer expression by binding to its promoter sequences and enhancing its activity. We found that knockdown of Dicer enhances the matrigel invasion of melanoma cells by at least twofold. In addition, we revealed that overexpression of exogenous Dicer reverts the enhanced melanoma cell invasion upon Sox4 knockdown
|
SIGNOR-258987
|
P43354
|
P28482
| 0
|
phosphorylation
|
up-regulates
| 0.395
|
We have shown that erk2 is a kinase to phosphorylate nurr1 on multiple sites. S126 and t132, which are located near af1 core of nurr1, are dominant sites phosphorylated by erk2. reporter gene assays show that nurr1delta124-133/t185a, an erk2 phospho-site mutant form, could not further increase its transcriptional activity on th promoter, suggesting that nurr1 phosphorylation by erk2 may regulate its transcriptional activity on th promoter.
|
SIGNOR-157167
|
P04049
|
P30304
| 0
|
dephosphorylation
|
down-regulates
| 0.395
|
Cdc25a can act on substrates other than cdks, since it dephosphorylates the homeodomain transcription factor cut and interacts with and dephosphorylates the proto-oncogene raf-1, resulting in a significant decrease in raf-1 kinase activity
|
SIGNOR-32548
|
P09471
|
P18825
| 0
|
binding
|
up-regulates activity
| 0.395
|
Here we systematically quantified ligand-induced interactions between 148 GPCRs and all 11 unique G alpha subunit C-termini. For each receptor, we probed chimeric G alpha subunit activation via a transforming growth factor-alpha (TGF alpha) shedding response in HEK293 cells lacking endogenous Gq/11- and G12/13- signaling. | We defined positive coupling if any member of the subfamily scored LogRAi ≥ -1 and negative coupling if all of the members scored LogRAi < -1 (Figure 3A-B). ROC analysis gives AUC = 0.78 (Figure S4A) when considering high-confidence known coupling data and suggested a threshold of LogRAi ≥ -1.0 for defining true couplings. | The score associated to this interaction has a LogRAi ≥ -1.0.
|
SIGNOR-256978
|
P24385
|
Q13627
| 0
|
phosphorylation
|
down-regulates
| 0.395
|
Dyrk1a controls the rate of cycd1 degradation by directly phosphorylating cycd1 at thr 286 and thereby regulates the fraction of cycling cells.
|
SIGNOR-202838
|
P55010
|
P68400
| 0
|
phosphorylation
|
up-regulates
| 0.394
|
We find that eif5 is associated with ck2 when the kinase activity is at the highest level in vivo, and is phosphorylated at ser389 and ser390 by ck2.
|
SIGNOR-141159
|
O95471
|
P09758
| 0
|
binding
|
up-regulates quantity
| 0.394
|
In summary, our findings provide evidence that Trop-2 is phosphorylated at Ser-322 by PKCα/δ and that this phosphorylation enhances cell motility and decreases claudin-7 localization to cellular borders.
|
SIGNOR-273822
|
P18847
|
Q99612
| 0
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.394
|
KLF6 binds directly to and activates the ATF3 promoter.
|
SIGNOR-266051
|
P14598
|
Q05513
| 0
|
phosphorylation
|
up-regulates
| 0.394
|
Phosphopeptide mapping of p47(phox) showed that, as opposed to pkc zeta, pkc alpha, beta ii, and delta are able to phosphorylate all the major pkc sites. The use of p47(phox) mutants identified serines 303, 304, 315, 320, 328, 359, 370, and 379 as targets of pkc alpha, beta ii, and delta.Taken together, these results suggest that pkc alpha, beta ii, delta, and zeta expressed in human neutrophils can individually phosphorylate p47(phox) and induce both its translocation and nadph oxidase activation.
|
SIGNOR-89280
|
Q13485
|
O75925
| 0
|
sumoylation
|
up-regulates
| 0.394
|
These data demonstrate that pias1 protein positively modulates tgf-beta responses as a sumo e3 ligase for smad4
|
SIGNOR-123462
|
P98170
|
P49841
| 0
|
phosphorylation
|
up-regulates activity
| 0.394
|
We now demonstrate that XIAP is phosphorylated by GSK3 at threonine 180, and that an alanine mutant (XIAPT180A) exhibits decreased Wnt activity compared to wild-type XIAP in cultured human cells and in Xenopus embryos.
|
SIGNOR-277390
|
Q8IX90
|
P06493
| 0
|
phosphorylation
|
up-regulates activity
| 0.394
|
Cdk1 treatment further enhanced the binding of Ska3 2D to Ndc80, suggesting that phosphorylation of other Cdk1 sites in Ska3 further contributes to the Ndc80C-Ska3 interaction, although this contribution is not apparent in our kinetochore localization assay.We next purified the GST-Ndc80C Bonsai construct that lacks the loop region of Ndc80 as well as the coiled coil regions of Ndc80C [17].|Thus, Ska3 can be phosphorylated by Cdk1 on T358 and T360 sites in vitro.We next tested whether Ska3 was required for Ska1 or Ska2 localization.
|
SIGNOR-278376
|
P30291
|
Q9Y297
| 0
|
binding
|
down-regulates
| 0.394
|
Scfb-trcp continues to have a role in this phase, however, through its induced degradation of the cdk1 inhibitor, wee1.
|
SIGNOR-128439
|
P17480
|
P28482
| 0
|
phosphorylation
|
down-regulates
| 0.394
|
Erk1/2 was found to phosphorylate the architectural transcription factor ubf at amino acids 117 and 201 within hmg boxes 1 and 2, preventing their interaction with dna
|
SIGNOR-112809
|
O15534
|
P78368
| 0
|
phosphorylation
|
down-regulates
| 0.394
|
Ck1_ and ck1_2 can promote proteasome-dependent per1 degradation in mammalian tissue culture cells, and their removal by rnai leads to an increased abundance of per1.
|
SIGNOR-137751
|
P09874
|
P00533
| 0
|
phosphorylation
|
up-regulates activity
| 0.394
|
EGFR and MET heterodimer interacts with and phosphorylates PARP1.
|
SIGNOR-279169
|
Q7Z6J0
|
P31749
| 0
|
phosphorylation
|
down-regulates
| 0.394
|
We report here that posh is a direct substrate for phosphorylation by akt in vivo and in vitro, and we identify a major site of akt phosphorylation as serine 304 of posh, which lies within the rac-binding domain. We further show that phosphorylation of posh results in a decreased ability to bind activated rac, as does phosphomimetic s304d and s304e mutation of posh.
|
SIGNOR-252501
|
P48431
|
P24941
| 0
|
phosphorylation
|
up-regulates activity
| 0.394
|
Cdk2 physically interacts with Sox2 and phosphorylates Sox2 at Ser 39 and Ser 253 in vitro.
|
SIGNOR-279448
|
Q15643
|
P61019
| 0
|
binding
|
up-regulates activity
| 0.394
|
Vesicle-associated Rab2 then mediates attachment to the Rab2 binding site within the central coiled-coil region of GMAP-210, bringing the vesicle into closer proximity to the target membrane. GMAP-210 function in vivo is dependent upon its ability to tether membranes, which is mediated exclusively by the amino-terminal ALPS motif. Binding to Rab2 is also important for GMAP-210 function, although it is dispensable for tethering per se.
|
SIGNOR-261300
|
O14645
|
Q92949
| 0
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.394
|
FOXJ1 expression in basal cells induced the expression of a panel of cilia-associated genes, including centrin 2 (CETN2); dynein, axonemal, heavy chain 11 (DNAH11); dynein, axonemal, intermediate chain 1 (DNAI1); dynein, axonemal, light intermediate chain 1 (DNALI1); EF-hand domain, C-terminal, containing 1 (EFHC1); sperm associated antigen 6 (SPAG6); tektin 1 (TEKT1), TEKT2 and tubulin, alpha 1a (TUBA1A; Figure 3C and Additional file 2: Table S1).
|
SIGNOR-266933
|
Q15303
|
Q6UW88
| 0
|
binding
|
up-regulates
| 0.394
|
Areg (amphiregulin), btc (beta-cellulin), egf, epgn (epigen), ereg (epiregulin), hbegf, nrg1, nrg2, nrg3, nrg4 and tgfa (tgfalpha) constitute egf family ligands for erbb family receptors.
|
SIGNOR-147835
|
P08581
|
Q6ZN28
| 0
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.394
|
Human colon carcinoma SW480 cells express virtually no MACC1. MACC1 cDNA transfection led not only to strong increases in MACC1 mRNA expression (Fig. 3a), but also to a 40-fold upregulation of the HGF receptor MET mRNA expression (Fig. 3b). This was confirmed on the protein level
|
SIGNOR-266058
|
P56945
|
Q15678
| 0
|
dephosphorylation
|
down-regulates
| 0.394
|
We show that p130 crk-associated substrate (p130cas) is a direct substrate of ptpn14 and that ptpn14 specifically regulates p130cas phosphorylation at tyrosine residue 128 (y128) in colorectal cancer (crc) cells. We engineered crc cells homozygous for a p130cas y128f knock-in mutant and found that these cells exhibit significantly reduced migration and colony formation
|
SIGNOR-197923
|
Q96R06
|
P53350
| 0
|
phosphorylation
|
up-regulates activity
| 0.394
|
Phosphorylation of the astrin N-terminal domain by Plk1 contributes to kinetochore\u2013microtubule attachment stability.|Taken together with the localisation data in XREF_FIG B, these data suggest that the presence of the Plk1 phosphorylated astrin N-terminus promotes the accumulation of the astrin complex at attached kinetochores, without which attachments appear more prone to dissociate.
|
SIGNOR-279423
|
P63092
|
Q00987
| 0
|
binding
|
down-regulates activity
| 0.394
|
Western blotting showed that increased MDM2 expression decreased Gαs protein content in HEK293 cells (Fig. 4B). Taken together, these data indicate that MDM2 binds to Gαs and has a direct impact on Gαs protein content.
|
SIGNOR-278070
|
Q92686
|
P17252
| 0
|
phosphorylation
|
up-regulates activity
| 0.394
|
Phosphorylation of RC3 by PKC alpha, beta, or gamma was stimulated by Ca2+, phospholipid, and diacylglycerol. A single site, Ser36, which is adjacent to the predicted calmodulin (CaM)-binding domain, was phosphorylated by these enzymes. Phosphorylation of RC3 by PKC or PKM, a protease-degraded PKC, was inhibited by CaM. The effect of CaM apparently targets at RC3, as phosphorylation of protamine sulfate by PKM was not inhibited by CaM.
|
SIGNOR-248913
|
Q13547
|
Q96EP1
| 0
|
polyubiquitination
|
down-regulates quantity by destabilization
| 0.394
|
Histone deacetylase 1 (HDAC1), which represses transcription by deacetylating histones, was newly isolated as a Chfr-interacting protein. Chfr binds and downregulates HDAC1 by inducing its polyubiquitylation, both in vitro and in vivo. Together, these results suggest that the ubiquitin ligase activity of Chfr targets HDAC1 for degradation.
|
SIGNOR-271465
|
Q07954
|
P12931
| 0
|
phosphorylation
|
up-regulates activity
| 0.394
|
We recently observed that the ldl receptor-related protein 1 (lrp-1) is tyrosine phosphorylated in v-src-transformed cells.Of the four tyrosine residues present in the cytoplasmic domain of lrp-1, only tyr 63 is phosphorylated by v-src in vivo or in vitro. Using fibroblasts deficient in src, yes and fyn, we were able to show that there are multiple kinases present in the cell that can phosphorylate lrp-1. Tyrosine-phosphorylated lrp-1 associates with shc, a ptb and sh2 domain containing signaling protein that is involved in the activation of ras
|
SIGNOR-101535
|
Q15438
|
P06241
| 0
|
phosphorylation
|
up-regulates activity
| 0.394
|
Fyn directly binds, phosphorylates, and activates cytohesin-1.
|
SIGNOR-280015
|
Q9H257
|
P40337
| 0
|
binding
|
down-regulates activity
| 0.393
|
We found that pVHL associates with the NF-kappaB agonist Card9 but does not target Card9 for destruction. Instead, pVHL serves as an adaptor that promotes the phosphorylation of the Card9 C terminus by CK2.
|
SIGNOR-257603
|
Q9BZL6
|
P17252
| 0
|
phosphorylation
|
up-regulates activity
| 0.393
|
Our data demonstrate that gastrin-stimulated PKD2 activation involves a heterotrimeric G alpha(q) protein as well as the activation of phospholipase C. Furthermore, we show that PKD2 can be activated by classical and novel members of the protein kinase C (PKC) family such as PKC alpha, PKC epsilon, and PKC eta.|The position of PKD2 phosphorylated at Ser876 and Ser706/Ser710 is indicated by anarrowhead.
|
SIGNOR-275955
|
Q9H4A3
|
P31749
| 0
|
phosphorylation
|
up-regulates
| 0.393
|
Phosphorylation of wnk1 on thr-58 contributes to sgk1 activation. these data suggest that activation of sgk1 by wnk1 requires the catalytic activity of akt.
|
SIGNOR-252481
|
O95967
|
P35555
| 0
|
binding
|
down-regulates activity
| 0.393
|
Fibulin-4 and -5 are extracellular glycoproteins with essential non-compensatory roles in elastic fiber assembly. Both fibulins differentially bound N-terminal fibrillin-1, which strongly inhibited their binding to lysyl oxidase and tropoelastin.
|
SIGNOR-251860
|
P23588
|
P31749
| 0
|
phosphorylation
|
up-regulates
| 0.393
|
Using an in vitro kinase assay, we found that pkb can directly phosphorylate eif4b on serine 422 (ser422). This was prevented by pretreatment of cells with the phosphatidylinositol 3-kinase (pi3k) inhibitor ly294002 or pharmacological inhibition of pkb. Phosphorylation regultes the activation of eukaryotic translation initiation factor 4b.
|
SIGNOR-252520
|
P46527
|
Q15418
| 0
|
phosphorylation
|
up-regulates activity
| 0.393
|
As for other PI3K effectors, RSK1 phosphorylates p27 at T198.|RSK1 overexpression increases p27pT198, p27-cyclin D1-Cdk4 complexes, and p27 stability.
|
SIGNOR-279653
|
Q99102
|
P42224
| 0
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.393
|
Through promoter screening, overexpressing methods and luciferase reporter studies, we found that transcription factors CREB, Ets-1, Elk-1 and STAT1 can positively regulate MUC4 expression at the promoter and mRNA level.
|
SIGNOR-254099
|
Q13547
|
P17844
| 0
|
binding
|
up-regulates
| 0.393
|
Wt p68 co-immunoprecipitates efficiently with hdac1, the k53r p68 does not / sumoylation is important for the interaction of p68 with hdac1 and for transcriptional repression by p68
|
SIGNOR-153715
|
P29353
|
Q16832
| 0
|
binding
|
up-regulates
| 0.393
|
Collectively, our findings are consistent with the following mechanism for src-dependent ddr2 activation and signaling: 1) ligand binding promotes phosphorylation of tyr-740 in the ddr2 activation loop by src;2) tyr-740 phosphorylation stimulates intramolecular autophosphorylation of ddr2;3) ddr2 autophosphorylation generates cytosolic domain phosphotyrosines that promote the formation of ddr2 cytosolic domain-shc signaling complexes.
|
SIGNOR-140724
|
Q9Y618
|
P51843
| 0
|
binding
|
up-regulates activity
| 0.393
|
The in vivo existence of an SF-1 corepressor complex consisting of DAX-1, RNF31, and SMRT at the steroidogenic promoters of the human StAR and CYP19 genes. We demonstrate that RNF31 is necessary for the stable association of the DAX-1 corepressor complex with chromatin-bound SF-1, thereby inhibiting the recruitment of coactivators and Pol II and controlling basal transcription levels of SF-1 target genes.
|
SIGNOR-271785
|
Q8WUM4
|
P12931
| 0
|
phosphorylation
|
down-regulates activity
| 0.393
|
Src phosphorylation of Alix/AIP1 modulates its interaction with binding partners and antagonizes its activities. Phosphorylation of Alix by Src caused it to translocate from the membrane and cytoskeleton to the cytoplasm and reduced its interaction with binding partners SETA/CIN85, epidermal growth factor receptor, and Pyk2.
|
SIGNOR-263201
|
P00533
|
O14965
| 0
|
phosphorylation
|
up-regulates activity
| 0.393
|
Because AURKA associated with EGFR, we next investigated whether AURKA phosphorylates EGFR at Thr654 and Ser1046.|Protein phosphorylation profiling using an in situ proximity ligation assay: phosphorylation of AURKA-elicited EGFR-Thr654 and EGFR-Ser1046 in lung cancer cells.
|
SIGNOR-279589
|
Q06413
|
Q92585
| 0
|
binding
|
up-regulates
| 0.393
|
Unexpectedly, however, emerging evidence implicate maml proteins as exciting key transcriptional co-activators in other signal transduction pathways including: muscle differentiation and myopathies (mef2c), tumor suppressor pathway (p53) and colon carcinoma survival (beta-catenin).
|
SIGNOR-144913
|
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