Accession stringlengths 8 11 | Organism_Name stringlengths 10 53 | Submitters stringlengths 4 2.42k ⌀ | Organization stringlengths 3 234 ⌀ | Org_location stringlengths 3 24 ⌀ | Release_Date stringlengths 10 10 | Isolate stringlengths 1 75 ⌀ | Species stringlengths 10 53 ⌀ | Genus stringlengths 7 22 ⌀ | Family stringlengths 10 19 ⌀ | Molecule_type stringclasses 14
values | Length int64 5k 95.4k | Sequence_Type stringclasses 2
values | Publications float64 1 134 ⌀ | Geo_Location stringlengths 3 88 ⌀ | Country stringlengths 3 32 ⌀ | Host stringlengths 3 64 ⌀ | Isolation_Source stringlengths 3 31 ⌀ | Collection_Date stringlengths 4 10 ⌀ | BioSample stringlengths 12 14 ⌀ | BioProject stringlengths 9 23 ⌀ | GenBank_Title stringlengths 22 320 | Sequence stringlengths 5k 95.4k | __index_level_0__ int64 39 112k |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KP067444.1 | Sapovirus GII | Liu,X., Yamamoto,D., Saito,M., Imagawa,T., Ablola,A., Tandoc,A.O. III, Segubre-Mercado,E., Lupisan,S.P., Okamoto,M., Furuse,Y., Oshitani,H., Tandoc,A., Oshitania,H. | Tohoku University Graduate School of Medicine, Department of Virology | Japan | 2015-07-15 | null | Sapporo virus | Sapovirus | Caliciviridae | ssRNA(+) | 7,460 | GenBank | 1 | Philippines | Philippines | Homo sapiens | feces | 2012-09-29 | null | null | Sapovirus GII strain PHL-TGO12-028, complete genome | GTGATTGGTTGGTATGGCTTCCAAGCCATTCTACCCAATTGAGTTCAACCGCAAGGTTGAAACAACAGTCCTCTTCTCTGCTCACCTCAGGGTGAGCGGGAGAGAGGAAATTTTTGAAACCAAGCAGGACATGTACGCCCATGTTTGTCGAGTGGTTGCCGGGGTGTGGCGCGAAATATTGCGTCGCATCCCGGTGGTCAGCCCCGTTTTCAGTGCGGAGGGGCTCCTAGATGCTTTTGCATCCAAACCCCCAGTGGACATTAACCCTGACACCACATTTCGTGAGTTGTTTGGGATAGATCCACATGAACAATTCCCAT... | 86,634 |
OK484998.1 | Sapovirus GIII | Liu,X., Liu,Y., Yin,G. | Yunnan Agricultural university, College of Veterinary Medicine | China | 2022-11-05 | null | Sapporo virus | Sapovirus | Caliciviridae | ssRNA(+) | 7,341 | GenBank | null | China | China | Sus scrofa | feces | 2020-06-08 | null | null | Sapovirus GIII strain YNJD, complete genome | GTGATCGTGATGGCTAATTGCCGTCCGTTGCCTATTGGGCATTTGCCCAACAGGATTTTTGGCACCCCACGACTCACCCCAGGGTGGGTGTGGGCGTGCACCAAAGGAGCTGCATTCAAATTAGAGTGGCTCCAAGATCCGGTGGTCATACGGCCCCCGGAGATTTTTGTTGCGCAAGGGGTGGTTGATGACTTCTTCCGCCCCAAGCGCGTTTTGCAGGGTGACCCACAACTCATTGCACAGGTTTTGCTGGGCGACGCCAACGGGCCACTCGTTGGTCCCGTGTCCATGCAGCAGCTAACATCACTGCTGCATGAGGT... | 22,366 |
OK484999.1 | Sapovirus GIII | Liu,X., Liu,Y., Yin,G. | Yunnan Agricultural university, College of Veterinary Medicine | China | 2022-11-05 | null | Sapporo virus | Sapovirus | Caliciviridae | ssRNA(+) | 7,341 | GenBank | null | China | China | Sus scrofa | feces | 2020-06-08 | null | null | Sapovirus GIII strain YNAN, complete genome | GTGATCGTGATGGCTAATTGCCGTCCGTTGCCTATTGGGCATTTGCCCAACAGGATTTTTGGCACCCCACGACTCACCCCAGGGTGGGTGTGGGCGTGCACCAATGGAGCTGCATTCAAACTAGAGTGGCTCCAAGACCTGGTGGTCATACGACCCCCCGAGGTTTTTGTTGCGCAAGGGGTAGTGGATGACTTCTTCCGCCCCAAGCGCGTTTTGCAGGGTGACCCGCAACTCATTGCACAGGTTTTGCTGGGCGATGCCAACGGGCCACTCGTTGGCCCTGTGTCCATGCAGCAGCTAACATCGCTGCTGCATGAGGT... | 22,367 |
OK485000.1 | Sapovirus GIII | Liu,X., Liu,Y., Yin,G. | Yunnan Agricultural university, College of Veterinary Medicine | China | 2022-11-05 | null | Sapporo virus | Sapovirus | Caliciviridae | ssRNA(+) | 7,350 | GenBank | null | China | China | Sus scrofa | feces | 2020-06-08 | null | null | Sapovirus GIII strain YNLH, complete genome | GTGATCGTGATGGCTAATTGCCGTCCGTTGCCTATTGGGCATTTGCCCAACAGGATTTTTGGCACCCCACGACTCACCCCAGGGTGGGTGTGGGCGTGCACTAATGGAGCTGCATTCAAACTGGAGTGGCTCCAAGACCCGGTGGTCATACGACCCCCGGAAATTTTTGTTGCGCAGGGGGTGGTGGACGATTTCTTCCGCCCCAAGCGCGTTTTGCAGGGTGACCCACAACTCATCGCACAGGTTTTGCTGGGCGACGCCAACGGACCTCTCGTTGGCCCCGTGTCCATGCAGCAGCTAACATCACTGCTGCATGAGGT... | 22,368 |
MW285640.1 | Sapovirus GIII | Liu,X., Liu,Y., Bi,J., Yin,G. | Yunnan Agricultural University, Veterinary Medicine College | China | 2021-12-28 | null | Sapporo virus | Sapovirus | Caliciviridae | ssRNA(+) | 7,341 | GenBank | null | China | China | Sus scrofa | feces | 2020-06-28 | null | null | Sapovirus GIII strain YNJD2020, complete genome | GTGATCGTGATGGCTAATTGCCGTCCGTTGCCTATTGGGCATTTGCCCAACAGGATTTTTGGCACCCCACGACTCACCCCAGGGTGGGTGTGGGCGTGCACCAAAGGAGCTGCATTCAAATTAGAGTGGCTCCAAGATCCGGTGGTCATACGGCCCCCGGAGATTTTTGTTGCGCAAGGGGTGGTTGATGACTTCTTCCGCCCCAAGCGCGTTTTGCAGGGTGACCCACAACTCATTGCACAGGTTTTGCTGGGCGACGCCAACGGGCCACTCGTTGGTCCCGTGTCCATGCAGCAGCTAACATCACTGCTGCATGAGGT... | 34,529 |
MW285641.1 | Sapovirus GIII | Liu,X., Liu,Y., Bi,J., Yin,G. | Yunnan Agricultural University, Veterinary Medicine College | China | 2021-12-28 | null | Sapporo virus | Sapovirus | Caliciviridae | ssRNA(+) | 7,341 | GenBank | null | China | China | Sus scrofa | feces | 2020-07-24 | null | null | Sapovirus GIII strain YNAN2020, complete genome | GTGATCGTGATGGCTAATTGCCGTCCGTTGCCTATTGGGCATTTGCCCAACAGGATTTTTGGCACCCCACGACTCACCCCAGGGTGGGTGTGGGCGTGCACCAATGGAGCTGCATTCAAACTAGAGTGGCTCCAAGACCTGGTGGTCATACGACCCCCCGAGGTTTTTGTTGCGCAAGGGGTAGTGGATGACTTCTTCCGCCCCAAGCGCGTTTTGCAGGGTGACCCGCAACTCATTGCACAGGTTTTGCTGGGCGATGCCAACGGGCCACTCGTTGGCCCTGTGTCCATGCAGCAGCTAACATCGCTGCTGCATGAGGT... | 34,530 |
MW285642.1 | Sapovirus GIII | Liu,X., Liu,Y., Bi,J., Yin,G. | Yunnan Agricultural University, Veterinary Medicine College | China | 2021-12-28 | null | Sapporo virus | Sapovirus | Caliciviridae | ssRNA(+) | 7,350 | GenBank | null | China | China | Sus scrofa | feces | 2020-08-08 | null | null | Sapovirus GIII strain YNLH2020, complete genome | GTGATCGTGATGGCTAATTGCCGTCCGTTGCCTATTGGGCATTTGCCCAACAGGATTTTTGGCACCCCACGACTCACCCCAGGGTGGGTGTGGGCGTGCACTAATGGAGCTGCATTCAAACTGGAGTGGCTCCAAGACCCGGTGGTCATACGACCCCCGGAAATTTTTGTTGCGCAGGGGGTGGTGGACGATTTCTTCCGCCCCAAGCGCGTTTTGCAGGGTGACCCACAACTCATCGCACAGGTTTTGCTGGGCGACGCCAACGGACCTCTCGTTGGCCCCGTGTCCATGCAGCAGCTAACATCACTGCTGCATGAGGT... | 34,531 |
KX688105.1 | Sapovirus GIII | Li,J. | Shanghai Jiao Tong University | China | 2018-08-31 | 1ah | Sapporo virus | Sapovirus | Caliciviridae | ssRNA(+) | 7,319 | GenBank | null | China | China | Sus scrofa | null | 2010 | null | null | Sapovirus GIII isolate 1ah, complete genome | GATGGCTAACTGCCGTCCGTTGCCTATTGGGCATTTGCCCAACAGGATTTTTAGCACCCCACGACTCACCCCAGGGTGGGTGTGGGCGTGCACTAGAGAAGCCATGTTCAAACTAGAGTGGCTTCAAGATCCGGTTGTTATTCAACCGCCGGATATTTATGTCGCACAAGGGGTGGTGGATGACTTCTTCCGCCCCAAGCGCGTTTTACAGGGTGATCCACAGCTCATTGCCCAGGTGCTGCTTGGTGATGCCAGTGGCCCGCTGGTTGGCCCCGTTTCCATGCAGCAACTGACATCATTACTGCATGAGGTCTCGCAGG... | 68,905 |
KX688107.1 | Sapovirus GIII | Li,J., Shen,Q., Zhang,W., Zhao,T., Li,Y., Jiang,J., Yu,X., Guo,Z., Cui,L., Hua,X. | Shanghai Jiao Tong University | China | 2017-03-29 | p2 | Sapporo virus | Sapovirus | Caliciviridae | ssRNA(+) | 7,387 | GenBank | 1 | China | China | Sus scrofa | null | 2015-10-16 | null | null | Sapovirus GIII isolate p2, complete genome | GTGATCGTGATGGCTAATTGCCGTCCGTTACCTATTGGGCATTTGCCCAACAGGATTTTCAGCACCCCACGACTCACCCCAGGGTGGGTGTGGGCGTGCACCAAAGAAGCCATGTTTAAGTTGGAGTGGCTTCAGGATCCGGTAGTCATTCGACAGCCGGATGTTTACGTCGCGCAAGGGGTGGTGGATGATTTCTTCCGCCCCAAGCGAGTTTTGCAGGGTGATCCACAGCTCATAGCACAAGTGTTACTTGGTGATGCCAGTGGCCCACTAGTTGGCCCTGTTTCCATGCAGCAACTGACATCATTGCTGCATGAGGT... | 77,481 |
OR837774.1 | Sapovirus sp. | George,U.E., Faleye,T.C., De Coninck,L., Agbaje,S.T., Ifeorah,I.M., Onoja,B.A., Oni,E.I., Olayinka,O.A., Ajileye,T.G., Oragwa,A.O., Akinleye,T.E., Popoola,B.O., Osasona,O.G., Olayinka,O.T., George,O.A., Ahmed,M.I., Komolafe,I.O., Adeniji,A.J., Matthijnssens,J., Adewumi,O.M. | Redeemer's University, African Centre of Excellence for Genomics of Infectious Diseases | Nigeria | 2023-12-25 | SaV/A14/AFP01/NGR/2020/S01 | Sapovirus sp. | Sapovirus | Caliciviridae | ssRNA(+) | 7,483 | GenBank | null | Nigeria: Lagos State | Nigeria | Homo sapiens | feces | 2020-01 | null | null | Sapovirus sp. isolate SaV/A14/AFP01/NGR/2020/S01, complete genome | AGAGACAGGTGTTGGGTGTGTTTGGTTGGTTGGTATGGCTTCTAAGCCATTCTATCCAATTGATTTCAACCAGAAGGTTGAAATTGCAATCCTCTTCTCCGCCCACCTCAGGGTGAGTGGGAGGGAGGAAATTTTTGAGACAAAGCATGATATGTACGCTCATGTTTGCCAGGTGGTTGCCGGGGTGCGGCGCGAGATATTGCGTCGTGTCCCGGTACCCACGCCCTCTTTTGATGAAGAGGGGCTCCTCGATGCATTTGCATCTAAACCCCCTGTGGATATCAACCCTGACACCACATTTCGTGAGTTGTTCGGTGTTG... | 10,009 |
OR837776.1 | Sapovirus sp. | George,U.E., Faleye,T.C., De Coninck,L., Agbaje,S.T., Ifeorah,I.M., Onoja,B.A., Oni,E.I., Olayinka,O.A., Ajileye,T.G., Oragwa,A.O., Akinleye,T.E., Popoola,B.O., Osasona,O.G., Olayinka,O.T., George,O.A., Ahmed,M.I., Komolafe,I.O., Adeniji,A.J., Matthijnssens,J., Adewumi,O.M. | Redeemer's University, African Centre of Excellence for Genomics of Infectious Diseases | Nigeria | 2023-12-25 | SaV/A16/AFP15/NGR/2020/S015 | Sapovirus sp. | Sapovirus | Caliciviridae | ssRNA(+) | 7,502 | GenBank | null | Nigeria: FCT, Abuja | Nigeria | Homo sapiens | feces | 2020-04 | null | null | Sapovirus sp. isolate SaV/A16/AFP15/NGR/2020/S015, complete genome | AGAGACAGGTGTTGGGTGTGTTTGGTTGGCATGGCTTCTAAGCCATTCTACCCAATTAAGTTCAACCCACGAGTTGAACATGCAGTCCTGTGTTCTGCCTACCTCAGGGTAGGTGGACGGGACTCAATCTTTGAAAACCACGAGGACATGTTAGCTCATGTTTCCCGTTTGGTTGAGCGGGCCTGGCAGCAACACCAGGCCCGCATTCCACGGCAGTTGGGGCTTGAATTTGAGGCTGAGGGGTTGTTGGACGCATTTTCATCCAAACCACCAGCCGACATTAATCCTGACACCACGTTTCGTGAACTCTTTGGCGTCGA... | 10,010 |
OR837777.1 | Sapovirus sp. | George,U.E., Faleye,T.C., De Coninck,L., Agbaje,S.T., Ifeorah,I.M., Onoja,B.A., Oni,E.I., Olayinka,O.A., Ajileye,T.G., Oragwa,A.O., Akinleye,T.E., Popoola,B.O., Osasona,O.G., Olayinka,O.T., George,O.A., Ahmed,M.I., Komolafe,I.O., Adeniji,A.J., Matthijnssens,J., Adewumi,O.M. | Redeemer's University, African Centre of Excellence for Genomics of Infectious Diseases | Nigeria | 2023-12-25 | SaV/A18/AFP18/NGR/2020/S018 | Sapovirus sp. | Sapovirus | Caliciviridae | ssRNA(+) | 7,456 | GenBank | null | Nigeria: Edo State | Nigeria | Homo sapiens | feces | 2020-05 | null | null | Sapovirus sp. isolate SaV/A18/AFP18/NGR/2020/S018, complete genome | TATAAGAGACAGGTGTTGGGTGTGTTTGGTTAGTATGGCTTCTAAGCCATTCTACCCTATTTCATTCAACCGCAAGGTTGAATATTCAGTGCTCAGATCGGCTCACCTCAGGGTGAGTGGTCGTGAGCAAATGTTTGAAACTATAGCAGAATTAGATAACTATGTAGAAACAGTGGTTGCTGGGCTGTGGCGTGACAATTTACGCCGCAGCCTGGAAGCGATCCCTACCTTCACTGAAGAGGGGCTGCTAGATTCTTTCTTGTCGAAACCACCCGTGGACATCAACCCAGACACGACGTTTCGTGAGTTATTTGGAGTTG... | 10,011 |
OR837779.1 | Sapovirus sp. | George,U.E., Faleye,T.C., De Coninck,L., Agbaje,S.T., Ifeorah,I.M., Onoja,B.A., Oni,E.I., Olayinka,O.A., Ajileye,T.G., Oragwa,A.O., Akinleye,T.E., Popoola,B.O., Osasona,O.G., Olayinka,O.T., George,O.A., Ahmed,M.I., Komolafe,I.O., Adeniji,A.J., Matthijnssens,J., Adewumi,O.M. | Redeemer's University, African Centre of Excellence for Genomics of Infectious Diseases | Nigeria | 2023-12-25 | SaV/A36/AFP33/NGR/2020/S033 | Sapovirus sp. | Sapovirus | Caliciviridae | ssRNA(+) | 7,494 | GenBank | null | Nigeria: Edo State | Nigeria | Homo sapiens | feces | 2020-08 | null | null | Sapovirus sp. isolate SaV/A36/AFP33/NGR/2020/S033, complete genome | GTATAAGAGACAGGTGTTGGGTGTGTTTGGTTAGTATGGCTTCTAAGCCATTCTACCCTATTTCATTCAACCGCAAGGTTGAATATTCAGTGCTCAGATCGGCTCACCTCAGGGTGAGTGGTCGTGAGCAAATGTTTGAAACTATAGCAGAATTAGATAACCATGTAGAAACAGTGGTTGCTGGGCTGTGGCGTGACAATTTACGCCGCAGCCTGGAAGCGATCCCTACCTTCACTGAAGAGGGGCTGCTAGATTCTTTCTTGTCGAAACCACCCGTGGACATCAACCCAGACACGACGTTTCGTGAGTTATTTGGAGTT... | 10,012 |
OR837780.1 | Sapovirus sp. | George,U.E., Faleye,T.C., De Coninck,L., Agbaje,S.T., Ifeorah,I.M., Onoja,B.A., Oni,E.I., Olayinka,O.A., Ajileye,T.G., Oragwa,A.O., Akinleye,T.E., Popoola,B.O., Osasona,O.G., Olayinka,O.T., George,O.A., Ahmed,M.I., Komolafe,I.O., Adeniji,A.J., Matthijnssens,J., Adewumi,O.M. | Redeemer's University, African Centre of Excellence for Genomics of Infectious Diseases | Nigeria | 2023-12-25 | SaV/A143/AFP39/NGR/2020/S039 | Sapovirus sp. | Sapovirus | Caliciviridae | ssRNA(+) | 7,526 | GenBank | null | Nigeria: FCT, Abuja | Nigeria | Homo sapiens | feces | 2020-09 | null | null | Sapovirus sp. isolate SaV/A143/AFP39/NGR/2020/S039, complete genome | TATAAGAGACAGGTTGGGTGTGTTTGGTTGGTATGGCTTCTAAGCCATTCTATCCAATTGATTTCAACCAGAAGGTTGAAATTGCAATCCTCTTCTCCGCCCACCTCAGGGTGAGTGGGAGGGAGGAAATTTTTGAGACAAAGCATGATATGTACGCTCATGTTTGTCAGGTGGTTGCCGGGGTGCGGCGCGAGATACTGCGTCGTGTCCCGGTACCCACGCCCTCTTTTGATGAAGAGGGGCTCCTCGATGCATTTGCATCTAAACCCCCTGTGGATATTAACCCTGACACCACATTTCGTGAGTTGTTCGGTATTGAC... | 10,013 |
OR837781.1 | Sapovirus sp. | George,U.E., Faleye,T.C., De Coninck,L., Agbaje,S.T., Ifeorah,I.M., Onoja,B.A., Oni,E.I., Olayinka,O.A., Ajileye,T.G., Oragwa,A.O., Akinleye,T.E., Popoola,B.O., Osasona,O.G., Olayinka,O.T., George,O.A., Ahmed,M.I., Komolafe,I.O., Adeniji,A.J., Matthijnssens,J., Adewumi,O.M. | Redeemer's University, African Centre of Excellence for Genomics of Infectious Diseases | Nigeria | 2023-12-25 | SaV/A143/AFP46/NGR/2020/S046 | Sapovirus sp. | Sapovirus | Caliciviridae | ssRNA(+) | 7,524 | GenBank | null | Nigeria: Lagos State | Nigeria | Homo sapiens | feces | 2020-11 | null | null | Sapovirus sp. isolate SaV/A143/AFP46/NGR/2020/S046, complete genome | GTATAAGAGACAGGTGTTGGGTGTGTTTGGTTAGGATGGCTTCAAAGCCATTTAAGCCAATAATCCTCAACCCCACTTTTGAGTGGGCTGTTTTCCAACGGTGCTACCTCAGGGTAGCACCACGGGAAACGTTTGTTGAGAACGTTACAGAATTACAAACATACTTCCACACGCGCGTCAGCGCGTGGGTCCGGCGTCGTCTGGAGCCTTCTTCCACGTTACGTTTCGTGGAGGAGGGTCTTCTAGACGCGTTCGGCAGCAAGCCACAGAACGACCCCAATGAGGACTTGCTTTTCCGTGACCTCTTTGGGATTGATGTG... | 10,014 |
MN187064.1 | Sapovirus sp. | Liu,J., Ge,L., Huo,Y. | The Sixth People's Hospital of Zhengzhou, Center for Translational Medicine | China | 2020-03-04 | null | Sapovirus sp. | Sapovirus | Caliciviridae | ssRNA(+) | 7,492 | GenBank | null | China | China | Homo sapiens | feces | 2015-09-07 | null | null | Sapovirus sp. strain 20150907, complete genome | GTGATTGGTTGGATGGCTTCCAAGCCATTCAAGCCAATAGTTCTCAATGTCACTTTCGAGTGGCAGGTCTTCAAGCGGTGCTACCTCAGGGTAGCGCCGCGTGAAGCATTTTGTGAGAACTTGAGTGAACTTCATCACTATTTTGCCAGGCGTGTGAACGCCTGGCTCAAGCATGCCACAAGGACCCTCCCAGACAAATACACGTTTGTCGAGGAGGGTCTCCTTGACATGTTTGGTACAAAGGCTCCTGACAGTGTTCAAGAAGGCACACTGTTCCGGGAGCTGTTCGGGGTTGACCAAACCGAGCAATTCCCGCTGTC... | 53,672 |
MF944258.1 | Sapovirus sp. | Liu,J. | The Sixth People's Hospital of Zhengzhou, Center for Translational Medicine | China | 2018-04-17 | null | Sapovirus sp. | Sapovirus | Caliciviridae | ssRNA(+) | 7,484 | GenBank | null | China | China | Homo sapiens | null | 2015-10-18 | null | null | Sapovirus sp. strain 20151018, complete genome | TGTGATTTGTTTGGATGGTTTCCAAGCCATTCTACCCAATAGAGTTCAACCCTAAAGTTGAGCTTCAAGTGCTCCGATCGGCCCACCTCAGGGTGGGTGGTCGTGAGCAAATGTTTGAAACCATCAACGATCTCAATGATCATGTTAGGGGTGTGGTGGCCAGACTGTGGTGTAAGCATCTGCATCGCAGTTTGGCTGCCACCCCCACATTCACAGAGGAGGGTTTGTTGGACTCTTTCCTTTCAAAGCCACCTGTTGACATCAATCCTGATACAACATTCCGCGAGCTATTCGGCATTGACCCACACGAACAATTCCCG... | 71,119 |
ON812168.1 | Sara tick phlebovirus | Cao,W., Jia,N., Lam,T.T.-Y., Ni,X., Liu,J. | Beijing Institute of Microbiology and Epidemiology, State Key Laboratory of Pathogen and Biosecurity | China | 2022-12-16 | TIGMIC_1 | Sara tick phlebovirus | Phlebovirus | Phenuiviridae | ssRNA(+/-) | 6,721 | GenBank | null | China:Heilongjiang | China | Ixodes persulcatus | null | 2019 | SAMN28669420 | PRJNA841744 | MAG: Sara tick phlebovirus isolate TIGMIC_1, complete genome | CACAGAGGCGACCCCCTTATATCCGAAATCTGCAAGAATGTCCTTGAGTCGGCTAGACCAATTGTCTCAATACCTGGTGGAGCAGGTAAGGGACAGAGAGCCTGGCTTGATTGTCCCAGATCACGTCTTCACAGATCTGGGTACATGGCTGAAACCACCTAGTGTGCTAGTGGAACAGACTCAGAGTGGTGTCCTGAGTGTGAAGTTTCCAGGACTGGAGCAATGGAAAAGCGCATCTGAGGTCTCCATGTCCTCAATAATAGAGGAGACATGGCCACAGGAAAGGGCCTCACACCTGCGACATGACTACACTGCTGGGT... | 20,544 |
ON812251.1 | Sara tick phlebovirus | Cao,W., Jia,N., Lam,T.T.-Y., Ni,X., Liu,J. | Beijing Institute of Microbiology and Epidemiology, State Key Laboratory of Pathogen and Biosecurity | China | 2022-12-16 | TIGMIC_2 | Sara tick phlebovirus | Phlebovirus | Phenuiviridae | ssRNA(+/-) | 6,707 | GenBank | null | China:Heilongjiang | China | Ixodes persulcatus | null | 2019 | SAMN28704359 | PRJNA841744 | MAG: Sara tick phlebovirus isolate TIGMIC_2, complete genome | CGGCCCCCTTATATCCGAAATCTGCAAGAATGTCCTTGAGTCGGCTAGACCAATTGTCTCAATACCTGGTGGAGCAGGTAAGGGACAGAGAGCCTGGCTTGATTGTCCCAGATCACGTCTTCACAGATCTGGGTACATGGCTGAAACCACCCAGTGTGCTAGTGGAACAGACTCAGAGTGGTGTCCTGAGTGTGAAGTTTCCAGGACTGGAGCAATGGAAAAGCGCATCTGAGGTCTCCATGTCCTCAATAATAGAGGAGACATGGCCACAGGAAAGGGCCTCACACCTGCGACATGATTACACTGCTGGTTTCTTTTGC... | 20,615 |
ON812253.1 | Sara tick phlebovirus | Cao,W., Jia,N., Lam,T.T.-Y., Ni,X., Liu,J. | Beijing Institute of Microbiology and Epidemiology, State Key Laboratory of Pathogen and Biosecurity | China | 2022-12-16 | TIGMIC_3 | Sara tick phlebovirus | Phlebovirus | Phenuiviridae | ssRNA(+/-) | 6,716 | GenBank | null | China:Heilongjiang | China | Ixodes persulcatus | null | 2019 | SAMN28704360 | PRJNA841744 | MAG: Sara tick phlebovirus isolate TIGMIC_3, complete genome | CGACCCCCTTATATCCGAAATCTGCAAGAATGTCCTTGAGTCGGCTAGACCAATTGTCTCAATACCTGGTGGAGCAGGTAAGGGACAGAGAGCCTGGCTTGATTGTCCCAGATCACGTCTTCACAGATCTGGGTACATGGCTGAAACCACCTAGTGTGCTAGTGGAACAGACTCAGAGTGGTGTCCTGAGTGTGAAGTTTCCAGGACTGGAGCAATGGAAAAGCGCATCTGAGGTCTCCATGTCCTCAATAATAGAGGAGACATGGCCACAGGAAAGGGCCTCACACCTGCGACATGATTACACTGCTGGTTTCTTTTGC... | 20,617 |
ON812254.1 | Sara tick phlebovirus | Cao,W., Jia,N., Lam,T.T.-Y., Ni,X., Liu,J. | Beijing Institute of Microbiology and Epidemiology, State Key Laboratory of Pathogen and Biosecurity | China | 2022-12-16 | TIGMIC_4 | Sara tick phlebovirus | Phlebovirus | Phenuiviridae | ssRNA(+/-) | 6,712 | GenBank | null | China:Heilongjiang | China | Ixodes persulcatus | null | 2019 | SAMN28669421 | PRJNA841744 | MAG: Sara tick phlebovirus isolate TIGMIC_4, complete genome | CACCCCCTTATATCCGAAATCTGCAAGAATGTCCTTGAGTCGGCTAGACCAATTGTCTCAATACCTGGTGGAGCAGGTAAGGGACAGAGAGCCTGGCTTGATTGTCCCAGATCACGTCTTCACAGATCTGGGTACATGGCTGAAACCACCTAGTGTGCTAGTGGAACAGACTCAGAGTGGTGTCCTGAGTGTGAAGTTTCCAGGACTGGAGCAATGGAAAAGCGCATCTGAGGTCTCCATGTCCTCAATAATAGAGGAGACATGGCCACAGGAAAGGGCCTCACACCTGCGACATGATTACACTGCTGGTTTCTTTTGCA... | 20,618 |
ON812305.1 | Sara tick phlebovirus | Cao,W., Jia,N., Lam,T.T.-Y., Ni,X., Liu,J. | Beijing Institute of Microbiology and Epidemiology, State Key Laboratory of Pathogen and Biosecurity | China | 2022-12-16 | TIGMIC_5 | Sara tick phlebovirus | Phlebovirus | Phenuiviridae | ssRNA(+/-) | 6,705 | GenBank | null | China:Jilin | China | Ixodes persulcatus | null | 2019 | SAMN28669474 | PRJNA841744 | MAG: Sara tick phlebovirus isolate TIGMIC_5, complete genome | CCCCCTTATATCCGAAATCTGCAAAAATGTCCATGAGTCGGCTAGACCAATTGTCACAGTACCTGGTGGACCAGGTCAGAGACAGAGAGCCTGGTCTCATTGTGCCAGATCATGTCTTTACAGACTTGGGCACTTGGTTGAAACCACCTAGTGTGCTGGTGGAGCAAACCCAGAGTGGGATCCTGACCGTAAAGTTCCCAGGTCTTGAGCAGTGGAAGAGTGCATCTGAGGTCTCTATGTCCTCTATTGTAGAGGAAACCTGGCCACAAGAGAGAGCTTCACACTTGCGGCATGACTACACTGCTGGCTTCTTTTGCCGG... | 20,667 |
ON812306.1 | Sara tick phlebovirus | Cao,W., Jia,N., Lam,T.T.-Y., Ni,X., Liu,J. | Beijing Institute of Microbiology and Epidemiology, State Key Laboratory of Pathogen and Biosecurity | China | 2022-12-16 | TIGMIC_6 | Sara tick phlebovirus | Phlebovirus | Phenuiviridae | ssRNA(+/-) | 6,715 | GenBank | null | China:Jilin | China | Ixodes persulcatus | null | 2019 | SAMN28669475 | PRJNA841744 | MAG: Sara tick phlebovirus isolate TIGMIC_6, complete genome | CGACCCCCTTATATCCGAAATCTGCAAGAATGTCCTTGAGTCGGCTAGACCAATTGTCTCAATACCTGGTGGAACAGGTAAGGGACAGAGAGCCTGGCTTGATTGTCCCAGATCACGTCTTCACAGATCTGGGTACATGGCTGAAACCACCTAGTGTGCTAGTGGAACAGACTCAGAGTGGTGTCCTGAGTGTGAAGTTTCCAGGACTGGAGCAATGGAAAAGCGCATCTGAGGTCTCCATGTCCTCAATAATAGAGGAGACATGGCCACAGGAAAGGGCCTCACACCTGCGACATGATTACACTGCTGGCTTCTTTTGC... | 20,668 |
ON812307.1 | Sara tick phlebovirus | Cao,W., Jia,N., Lam,T.T.-Y., Ni,X., Liu,J. | Beijing Institute of Microbiology and Epidemiology, State Key Laboratory of Pathogen and Biosecurity | China | 2022-12-16 | TIGMIC_7 | Sara tick phlebovirus | Phlebovirus | Phenuiviridae | ssRNA(+/-) | 6,715 | GenBank | null | China:Jilin | China | Ixodes persulcatus | null | 2019 | SAMN28688391 | PRJNA841744 | MAG: Sara tick phlebovirus isolate TIGMIC_7, complete genome | CGACCCCCTTATATCCGAAATCTGCAAGAATGTCCTTGAGTCGGCTAGACCAATTGTCTCAATACCTGGTGGAGCAGGTAAGGGACAGAGAGCCTGGCTTGATTGTCCCAGATCACGTCTTCACAGATCTGGGTACATGGCTGAAACCACCTAGTGTGCTAGTGGAACAGACTCAGAGTGGTGTCCTGAGTGTGAAGTTTCCAGGACTGGAGCAATGGAAAAGCGCATCTGAGGTCTCCATGTCCTCAATAATAGAGGAGACATGGCCACAGGAAAGGGCCTCACACCTGCGACATGATTACACTGCTGGTTTCTTTTGC... | 20,669 |
ON812308.1 | Sara tick phlebovirus | Cao,W., Jia,N., Lam,T.T.-Y., Ni,X., Liu,J. | Beijing Institute of Microbiology and Epidemiology, State Key Laboratory of Pathogen and Biosecurity | China | 2022-12-16 | TIGMIC_8 | Sara tick phlebovirus | Phlebovirus | Phenuiviridae | ssRNA(+/-) | 6,716 | GenBank | null | China:Jilin | China | Ixodes persulcatus | null | 2019 | SAMN28697475 | PRJNA841744 | MAG: Sara tick phlebovirus isolate TIGMIC_8, complete genome | CGACCCCCTTATATCCGAAATCTGCAAGAATGTCCTTGAGTCGGCTAGACCAATTGTCTCAATACCTGGTGGAGCAGGTAAGGGACAGAGAGCCTGGCTTGATTGTCCCAGATCACGTCTTCACAGATCTGGGTACATGGCTGAAACCACCTAGTGTGCTAGTGGAACAGACTCAGAGTGGTGTCCTGAGTGTGAAGTTCCCAGGACTGGAGCAATGGAAAAGCGCATCTGAGGTCTCCATGTCCTCAATAATAGAGGAGACATGGCCACAGGAAAGGGCCTCACACCTGCGACATGATTACACTGCTGGTTTCTTTTGC... | 20,670 |
ON812310.1 | Sara tick phlebovirus | Cao,W., Jia,N., Lam,T.T.-Y., Ni,X., Liu,J. | Beijing Institute of Microbiology and Epidemiology, State Key Laboratory of Pathogen and Biosecurity | China | 2022-12-16 | TIGMIC_10 | Sara tick phlebovirus | Phlebovirus | Phenuiviridae | ssRNA(+/-) | 6,715 | GenBank | null | China:Jilin | China | Ixodes persulcatus | null | 2019 | SAMN28669476 | PRJNA841744 | MAG: Sara tick phlebovirus isolate TIGMIC_10, complete genome | CACCCCCTTATATCCGAAATCTGCAAGAATGTCCTTGAGTCGGCTAGACCAATTGTCTCAATACCTGGTGGAGCAGGTAAGGGACAGAGAGCCTGGCTTGATTGTCCCAGATCACGTCTTCACAGATCTGGGTACATGGCTGAAACCACCTAGTGTGCTAGTGGAACAGACTCAGAGTGGTGTCCTGAGTGTGAAGTTTCCAGGACTGGAGCAATGGAAAAGCGCATCTGAGGTCTCCATGTCCTCAATAATAGAGGAGACATGGCCACAGGAAAGGGCCTCACACCTGCGACATGATTACACTGCTGGTTTCTTTTGCA... | 20,671 |
ON812311.1 | Sara tick phlebovirus | Cao,W., Jia,N., Lam,T.T.-Y., Ni,X., Liu,J. | Beijing Institute of Microbiology and Epidemiology, State Key Laboratory of Pathogen and Biosecurity | China | 2022-12-16 | TIGMIC_11 | Sara tick phlebovirus | Phlebovirus | Phenuiviridae | ssRNA(+/-) | 6,714 | GenBank | null | China:Jilin | China | Ixodes persulcatus | null | 2019 | SAMN28669477 | PRJNA841744 | MAG: Sara tick phlebovirus isolate TIGMIC_11, complete genome | CGACCCCCTTATATCCGAAATCTGCAAGAATGTCCTTGAGTCGGCTAGACCAATTGTCTCAATACCTGGTGGAGCAGGTAAGGGACAGAGAGCCTGGCTTGATTGTCCCAGATCACGTCTTCACAGATCTGGGTACATGGCTGAAACCACCTAGTGTGCTAGTGGAACAGACTCAGAGTGGTGTCCTGAGTGTGAAGTTCCCAGGACTGGAGCAATGGAAAAGCGCATCTGAGGTCTCCATGTCCTCAATAATAGAGGAGACATGGCCACAGGAAAGGGCCTCACACCTGCGACATGATTACACTGCTGGTTTCTTTTGC... | 20,672 |
ON812313.1 | Sara tick phlebovirus | Cao,W., Jia,N., Lam,T.T.-Y., Ni,X., Liu,J. | Beijing Institute of Microbiology and Epidemiology, State Key Laboratory of Pathogen and Biosecurity | China | 2022-12-16 | TIGMIC_12 | Sara tick phlebovirus | Phlebovirus | Phenuiviridae | ssRNA(+/-) | 6,708 | GenBank | null | China:Jilin | China | Ixodes persulcatus | null | 2019 | SAMN28688392 | PRJNA841744 | MAG: Sara tick phlebovirus isolate TIGMIC_12, complete genome | GACCCCCTTATATCCGAAATCTGCAAGAATGTCCTTGAGTCGGCTAGACCAATTGTCTCAATACCTGGTGGAGCAGGTAAGGGACAGAGAGCCTGGCTTGATTGTCCCAGATCACGTCTTCACAGATCTGGGTACATGGCTGAAACCACCTAGTGTGCTAGTGGAACAGACTCAGAGTGGTGTCCTGAGTGTGAAGTTTCCAGGACTGGAGCAATGGAAAAGCGCATCTGAGGTCTCCATGTCCTCAATAATAGAGGAGACATGGCCACAGGAAAGGGCCTCACACCTGCGACATGATTACACTGCTGGTTTCTTTTGCA... | 20,674 |
ON812315.1 | Sara tick phlebovirus | Cao,W., Jia,N., Lam,T.T.-Y., Ni,X., Liu,J. | Beijing Institute of Microbiology and Epidemiology, State Key Laboratory of Pathogen and Biosecurity | China | 2022-12-16 | TIGMIC_13 | Sara tick phlebovirus | Phlebovirus | Phenuiviridae | ssRNA(+/-) | 6,719 | GenBank | null | China:Jilin | China | Ixodes persulcatus | null | 2019 | SAMN28697476 | PRJNA841744 | MAG: Sara tick phlebovirus isolate TIGMIC_13, complete genome | TCCGATCTCCCTTATATCCGAAATCTGCAAGAATGTCCTTGAGTCGGCTAGACCAATTGTCTCAATACCTGGTGGAGCAGGTAAGGGACAGAGAGCCTGGCTTGATTGTCCCAGATCACGTCTTCACAGATCTGGGTACATGGCTGAAACCTCCTAGTGTGCTAGTGGAACAGACTCAGAGTGGTGTCCTGAGTGTGAAGTTTCCAGGGCTGGAGCAATGGAAAAGCGCATCTGAGGTCTCCATGTCCTCAATAATAGAGGAGACATGGCCACAGGAAAGGGCCTCACACCTGCGACATGATTACACTGCTGGTTTCTTT... | 20,676 |
ON812316.1 | Sara tick phlebovirus | Cao,W., Jia,N., Lam,T.T.-Y., Ni,X., Liu,J. | Beijing Institute of Microbiology and Epidemiology, State Key Laboratory of Pathogen and Biosecurity | China | 2022-12-16 | TIGMIC_14 | Sara tick phlebovirus | Phlebovirus | Phenuiviridae | ssRNA(+/-) | 6,714 | GenBank | null | China:Jilin | China | Ixodes persulcatus | null | 2019 | SAMN28704362 | PRJNA841744 | MAG: Sara tick phlebovirus isolate TIGMIC_14, complete genome | CAGAGGCGACCCCCTTATATCCGAAATCTGCAAGAATGTCCTTGAGTCGGCTAGACCAATTGTCTCAATACCTGGTGGAGCAGGTAAGGGACAGAGAGCCTGGCCTGATTGTCCCAGATCACGTCTTCACAGATCTGGGTACATGGCTGAAACCACCTAGTGTGCTAGTGGAACAGACTCAGAGTGGTGTCCTGAGTGTGAAGTTTCCAGGACTGGAGCAATGGAAAAGCGCATCTGAGGTCTCCATGTCCTCAATAATAGAGGAGACATGGCCACAGGAAAGGGCCTCACACCTGCGACATGATTACACTGCTGGTTTC... | 20,677 |
OP776338.1 | Sarbecovirus sp. | Apaa,T., Tarlinton,R., Staley,C., Withers,A., Chadwick,E., Hailer,F., Mckenzie,L., Lambin,X., Mathews,F., Harrison,S., Bremner-Harrision,S., Loose,M., Blanchard,A., Bennett,M. | University of Nottingham, School of Veterinary Medicine and Science | United Kingdom | 2023-02-06 | RhGB02 | Sarbecovirus sp. | Betacoronavirus | Coronaviridae | ssRNA(+) | 29,566 | GenBank | null | United Kingdom | United Kingdom | Rhinolophus hipposideros | null | 2021-06-24 | null | null | Sarbecovirus sp. isolate RhGB02, complete genome | TCCTTCCCAGGATAGCCTCCCAACTTTGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTACTTGTCACTTGGCTGTATGCCCAGTGCATCTACGCAGTATTATTTTTAATTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCCGTCTTCTGCAGGTTGCTTACGGTTTCGTCCGTGTTGCAGCCGACAATCAGCATACCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTTCAACTTAGTTTACCTGTATTACAGGTTCGC... | 18,721 |
OP776339.1 | Sarbecovirus sp. | Apaa,T., Tarlinton,R., Staley,C., Withers,A., Chadwick,E., Hailer,F., Mckenzie,L., Lambin,X., Mathews,F., Harrison,S., Bremner-Harrision,S., Loose,M., Blanchard,A., Bennett,M. | University of Nottingham, School of Veterinary Medicine and Science | United Kingdom | 2023-02-06 | RhGB05 | Sarbecovirus sp. | Betacoronavirus | Coronaviridae | ssRNA(+) | 30,600 | GenBank | null | United Kingdom | United Kingdom | Rhinolophus hipposideros | null | 2021-09-10 | null | null | Sarbecovirus sp. isolate RhGB05, complete genome | CCTTCCCAGGATAGCCTCCCAACTTTGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTACTTGTCACTAGGCTGTATGCCCAGTGCATCTACGCAGTATTGTTTTTAATTAACTACTGTCGTTGACAGGACACGAGTAACTCGTCCGTCTTCTGCAGGTTGCTTACGGTTTCGTCCGTGTTGCAGCCGACAATCAGCATATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTTAGTTTACCTGTTTTACAGGTTCGCG... | 18,722 |
OP776340.1 | Sarbecovirus sp. | Apaa,T., Tarlinton,R., Staley,C., Withers,A., Chadwick,E., Hailer,F., Mckenzie,L., Lambin,X., Mathews,F., Harrison,S., Bremner-Harrision,S., Loose,M., Blanchard,A., Bennett,M. | University of Nottingham, School of Veterinary Medicine and Science | United Kingdom | 2023-02-06 | RhGB06 | Sarbecovirus sp. | Betacoronavirus | Coronaviridae | ssRNA(+) | 30,463 | GenBank | null | United Kingdom | United Kingdom | Rhinolophus hipposideros | null | 2021-08-30 | null | null | Sarbecovirus sp. isolate RhGB06, complete genome | ATCCTTCCCAGGATAGCCTCCCAACTTTGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTACTTGTCACTAGGCTGTATGCCCAGTGCATCTACGCAGTATTGTTTTTAATTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCCGTCTTCTGCAGGTTGCTTACGGTTTCGTCCGTGTTGCAGCCGACAATCAGCATATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTTAGTTTACCTGTTTTACAGGTTCG... | 18,723 |
LC663793.1 | Sarbecovirus sp. | Murakami,S., Horimoto,T. | Laboratory of Veterinary Microbiology; 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657 | Japan | 2022-09-03 | null | Sarbecovirus sp. | Betacoronavirus | Coronaviridae | ssRNA(+) | 29,718 | GenBank | null | Japan: Shizuoka | Japan | Rhinolophus cornutus | feces | 2020-09 | null | null | Sarbecovirus sp. Rc-kw8 RNA, complete genome | ATATTAGGTTTATACCTTCCCAGGGTGGAAACCAACCAACTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCGCTCAGCTGCATGCTCAGTGCACCCACGCAGTATAATTAATAAACTTTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCATACCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGATTCAACGAGAAAACACACGTCCAACTCAGTTTGCCT... | 25,846 |
OK287354.1 | Sarbecovirus sp. | Xia,X., Wang,B., Huang,B., Fan,Y., Huang,X., Qu,L., Hou,Y., Wang,R. | Faculty of Life Science and Technology, Kunming University of Science and Technology | China | 2022-08-20 | BetaCoV_Yunnan_Rs_KMC6_2020 | Sarbecovirus sp. | Betacoronavirus | Coronaviridae | ssRNA(+) | 29,528 | GenBank | null | China | China | Rhinolophus sinicus | feces, abdominal cavity | 2020-10 | null | null | Sarbecovirus sp. isolate BetaCoV_Yunnan_Rs_KMC6_2020, complete genome | TTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTAGCTGTCGCTCGGCTGCATGCCTAGTGCACCTACGCAGTATAAACAATAATAAATTTTACTGTCGTTGACAAGAAACGAGTAACTCGTCCCTCTTCTGCAGACTGCTTACGGTTTCGTCCGTGTTGCAGTCGATCATCAGCATACCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTTCTTGGTGTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTCTTCAGGTTAGAGACGTGTTAGTGCGTGGCTTCGGGGACT... | 26,708 |
OK287355.1 | Sarbecovirus sp. | Xia,X., Wang,B., Huang,B., Fan,Y., Huang,X., Qu,L., Hou,Y., Wang,R. | Faculty of Life Science and Technology, Kunming University of Science and Technology | China | 2022-08-20 | BetaCoV_Yunnan_Rp_JCC9_2020 | Sarbecovirus sp. | Betacoronavirus | Coronaviridae | ssRNA(+) | 29,694 | GenBank | null | China | China | Rhinolophus blythi | feces, abdominal cavity | 2020-03 | null | null | Sarbecovirus sp. isolate BetaCoV_Yunnan_Rp_JCC9_2020, complete genome | TTACCTACCCAAGAAAAGCCAACCACTCTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGTTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTT... | 26,709 |
OK017792.1 | Sarbecovirus sp. | Wu,Z., Han,Y., Wang,Y., Liu,B., Zhao,L., Zhang,J., Su,H., Zhao,W., Liu,L., Bai,S., Dong,J., Sun,L., Zhu,Y., Zhou,S., Song,Y., Sui,H., Yang,J., Wang,J., Zhang,S., Qian,Z., Jin,Q. | Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College, NHC Key Laboratory of Systems Biology of Pathogens | null | 2021-09-22 | GD2017F | Sarbecovirus sp. | Betacoronavirus | Coronaviridae | ssRNA(+) | 29,537 | GenBank | 1 | China: Guangdong | China | Rhinolophus affinis | null | 2017-08 | null | null | Sarbecovirus sp. isolate GD2017F, complete genome | AATTTTACTGTCGTTGACAAGAAACGAGTAACTCGTCCTTCTTCTGCAGACTGCTTACGGTTTCGTCCGTGTTGCAGTCGATCATCAGCATACCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTTCTTGGTGTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTCTTCAGGTTAGAGACGTGCTAGTGCGTGGCTTCGGGGACTCTGTGGAAGAGGCCCTATCGGAGGCACGTGAACATCTTAAAAATGGCACTTGTGGTTTAGTAGAGCTGGAAAAAGGCGTGCTGCCCCAGCTTGA... | 37,902 |
OK017793.1 | Sarbecovirus sp. | Wu,Z., Han,Y., Wang,Y., Liu,B., Zhao,L., Zhang,J., Su,H., Zhao,W., Liu,L., Bai,S., Dong,J., Sun,L., Zhu,Y., Zhou,S., Song,Y., Sui,H., Yang,J., Wang,J., Zhang,S., Qian,Z., Jin,Q. | Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College, NHC Key Laboratory of Systems Biology of Pathogens | null | 2021-09-22 | YN2020A | Sarbecovirus sp. | Betacoronavirus | Coronaviridae | ssRNA(+) | 29,310 | GenBank | 1 | China: Yunnan | China | Rhinolophus affinis | null | 2020-09 | null | null | Sarbecovirus sp. isolate YN2020A, complete genome | ACGAGTAACTCGTCCCTCTTCTGCAGACTGCTTACGGTTTCGTCCGTGTTGCAGTCGATCATCAGCATACCTAGGTTTTGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTTCTTGGTGTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTCTTCAGGTTAGAGACGTGCTAGTGCGTGGCTTCGGGGACTCTGTGGAAGAGGCCCTATCGGAGGCACGTGAACATCTTAAAAATGGCACTTGTGGTTTAGTAGAGCTGGAAAAAGGCGTACTGCCCCAGCTTGAACAGCCCTATGTGTTCATTAAAC... | 37,903 |
OK017794.1 | Sarbecovirus sp. | Wu,Z., Han,Y., Wang,Y., Liu,B., Zhao,L., Zhang,J., Su,H., Zhao,W., Liu,L., Bai,S., Dong,J., Sun,L., Zhu,Y., Zhou,S., Song,Y., Sui,H., Yang,J., Wang,J., Zhang,S., Qian,Z., Jin,Q. | Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College, NHC Key Laboratory of Systems Biology of Pathogens | null | 2021-09-22 | LN2020A | Sarbecovirus sp. | Betacoronavirus | Coronaviridae | ssRNA(+) | 29,167 | GenBank | 1 | China: Liaoning | China | Rhinolophus ferrumequinum | null | 2020-09 | null | null | Sarbecovirus sp. isolate LN2020A, complete genome | AACTTTACTGTCGTTGACAAGAAACGAGTAACTCGTCCTTCTTCTGCAGACTGCTTACGGTTTCGTCCGTGTCGCAGTCGATCATCAGCATACCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTTCTTGGTGTCAACGAGAAAACACACGTCCAACTCAGTTTACCTGTTCTTCAGGTTAGTGACGTGTTAGTGCGTGGTTTCGGGGATACTGTGGAAGAAGCCCTAGCGGAAGCACGTGAACATCTTAAAAATGGCACTTGTGGCCTAGTAGAGCTGGAAAAAGGTGTCTTACGCCAGCTTGA... | 37,904 |
OK017795.1 | Sarbecovirus sp. | Wu,Z., Han,Y., Wang,Y., Liu,B., Zhao,L., Zhang,J., Su,H., Zhao,W., Liu,L., Bai,S., Dong,J., Sun,L., Zhu,Y., Zhou,S., Song,Y., Sui,H., Yang,J., Wang,J., Zhang,S., Qian,Z., Jin,Q. | Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College, NHC Key Laboratory of Systems Biology of Pathogens | null | 2021-09-22 | LN2020B | Sarbecovirus sp. | Betacoronavirus | Coronaviridae | ssRNA(+) | 29,167 | GenBank | 1 | China: Liaoning | China | Rhinolophus ferrumequinum | null | 2020-09 | null | null | Sarbecovirus sp. isolate LN2020B, complete genome | AACTTTACTGTCGTTGACAAGAAACGAGTAACTCGTCCTTCTTCTGCAGACTGCTTACGGTTTCGTCCGTGTCGCAGTCGATCATCAGCATACCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTTCTTGGTGTCAACGAGAAAACACACGTCCAACTCAGTTTACCTGTTCTTCAGGTTAGTGACGTGTTAGTGCGTGGTTTCGGGGATACTGTGGAAGAAGCCCTAGCGGAAGCACGTGAACATCTTAAAAATGGCACTTGTGGCCTAGTAGAGCTGGAAAAAGGTGTCTTACGCCAGCTTGA... | 37,905 |
OK017796.1 | Sarbecovirus sp. | Wu,Z., Han,Y., Wang,Y., Liu,B., Zhao,L., Zhang,J., Su,H., Zhao,W., Liu,L., Bai,S., Dong,J., Sun,L., Zhu,Y., Zhou,S., Song,Y., Sui,H., Yang,J., Wang,J., Zhang,S., Qian,Z., Jin,Q. | Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College, NHC Key Laboratory of Systems Biology of Pathogens | null | 2021-09-22 | LN2020C | Sarbecovirus sp. | Betacoronavirus | Coronaviridae | ssRNA(+) | 28,588 | GenBank | 1 | China: Liaoning | China | Rhinolophus ferrumequinum | null | 2020-09 | null | null | Sarbecovirus sp. isolate LN2020C, complete genome | AACTTTACTGTCGTTGACAAGAAACGAGTAACTCGTCCTTCTTCTGCAGACTGCTTACGGTTTCGTCCGTGTCGCAGTCGATCATCAGCATACCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTTCTTGGTGTCAACGAGAAAACACACGTCCAACTCAGTTTACCTGTTCTTCAGGTTAGTGACGTGTTAGTGCGTGGTTTCGGGGATACTGTGGAAGAAGCCCTAGCGGAAGCACGTGAACATCTTAAAAATGGCACTTGTGGCCTAGTAGAGCTGGAAAAAGGTGTCTTACGCCAGCTTGA... | 37,906 |
OK017797.1 | Sarbecovirus sp. | Wu,Z., Han,Y., Wang,Y., Liu,B., Zhao,L., Zhang,J., Su,H., Zhao,W., Liu,L., Bai,S., Dong,J., Sun,L., Zhu,Y., Zhou,S., Song,Y., Sui,H., Yang,J., Wang,J., Zhang,S., Qian,Z., Jin,Q. | Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College, NHC Key Laboratory of Systems Biology of Pathogens | null | 2021-09-22 | LN2020E | Sarbecovirus sp. | Betacoronavirus | Coronaviridae | ssRNA(+) | 29,167 | GenBank | 1 | China: Liaoning | China | Rhinolophus ferrumequinum | null | 2020-09 | null | null | Sarbecovirus sp. isolate LN2020E, complete genome | AACTTTACTGTCGTTGACAAGAAACGAGTAACTCGTCCTTCTTCTGCAGACTGCTTACGGTTTCGTCCGTGTCGCAGTCGATCATCAGCATACCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTTCTTGGTGTCAACGAGAAAACACACGTCCAACTCAGTTTACCTGTTCTTCAGGTTAGTGACGTGTTAGTGCGTGGTTTCGGGGATACTGTGGAAGAAGCCCTAGCGGAAGCACGTGAACATCTTAAAAATGGCACTTGTGGCCTAGTAGAGCTGGAAAAAGGTGTCTTACGCCAGCTTGA... | 37,907 |
OK017798.1 | Sarbecovirus sp. | Wu,Z., Han,Y., Wang,Y., Liu,B., Zhao,L., Zhang,J., Su,H., Zhao,W., Liu,L., Bai,S., Dong,J., Sun,L., Zhu,Y., Zhou,S., Song,Y., Sui,H., Yang,J., Wang,J., Zhang,S., Qian,Z., Jin,Q. | Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College, NHC Key Laboratory of Systems Biology of Pathogens | null | 2021-09-22 | LN2020F | Sarbecovirus sp. | Betacoronavirus | Coronaviridae | ssRNA(+) | 29,167 | GenBank | 1 | China: Liaoning | China | Rhinolophus ferrumequinum | null | 2020-09 | null | null | Sarbecovirus sp. isolate LN2020F, complete genome | AACTTTACTGTCGTTGACAAGAAACGAGTAACTCGTCCTTCTTCTGCAGACTGCTTACGGTTTCGTCCGTGTCGCAGTCGATCATCAGCATACCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTTCTTGGTGTCAACGAGAAAACACACGTCCAACTCAGTTTACCTGTTCTTCAGGTTAGTGACGTGTTAGTGCGTGGTTTCGGGGATACTGTGGAAGAAGCCCTAGCGGAAGCACGTGAACATCTTAAAAATGGCACTTGTGGCCTAGTAGAGCTGGAAAAAGGTGTCTTACGCCAGCTTGA... | 37,908 |
OK017799.1 | Sarbecovirus sp. | Wu,Z., Han,Y., Wang,Y., Liu,B., Zhao,L., Zhang,J., Su,H., Zhao,W., Liu,L., Bai,S., Dong,J., Sun,L., Zhu,Y., Zhou,S., Song,Y., Sui,H., Yang,J., Wang,J., Zhang,S., Qian,Z., Jin,Q. | Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College, NHC Key Laboratory of Systems Biology of Pathogens | null | 2021-09-22 | LN2020G | Sarbecovirus sp. | Betacoronavirus | Coronaviridae | ssRNA(+) | 29,168 | GenBank | 1 | China: Liaoning | China | Rhinolophus ferrumequinum | null | 2020-09 | null | null | Sarbecovirus sp. isolate LN2020G, complete genome | AACTTTACTGTCGTTGACAAGAAACGAGTAACTCGTCCTTCTTCTGCAGACTGCTTACGGTTTCGTCCGTGTCGCAGTCGATCATCAGCATACCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTTCTTGGTGTCAACGAGAAAACACACGTCCAACTCAGTTTACCTGTTCTTCAGGTTAGTGACGTGTTAGTGCGTGGTTTCGGGGATACTGTGGAAGAAGCCCTAGCGGAAGCACGTGAACATCTTAAAAATGGCACTTGTGGCCTAGTAGAGCTGGAAAAAGGTGTCTTACGCCAGCTTGA... | 37,909 |
OK017800.1 | Sarbecovirus sp. | Wu,Z., Han,Y., Wang,Y., Liu,B., Zhao,L., Zhang,J., Su,H., Zhao,W., Liu,L., Bai,S., Dong,J., Sun,L., Zhu,Y., Zhou,S., Song,Y., Sui,H., Yang,J., Wang,J., Zhang,S., Qian,Z., Jin,Q. | Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College, NHC Key Laboratory of Systems Biology of Pathogens | null | 2021-09-22 | LN2020H | Sarbecovirus sp. | Betacoronavirus | Coronaviridae | ssRNA(+) | 29,167 | GenBank | 1 | China: Liaoning | China | Rhinolophus ferrumequinum | null | 2020-09 | null | null | Sarbecovirus sp. isolate LN2020H, complete genome | AACTTTACTGTCGTTGACAAGAAACGAGTAACTCGTCCTTCTTCTGCAGACTGCTTACGGTTTCGTCCGTGTCGCAGTCGATCATCAGCATACCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTTCTTGGTGTCAACGAGAAAACACACGTCCAACTCAGTTTACCTGTTCTTCAGGTTAGTGACGTGTTAGTGCGTGGTTTCGGGGATACTGTGGAAGAAGCCCTAGCGGAAGCACGTGAACATCTTAAAAATGGCACTTGTGGCCTAGTAGAGCTGGAAAAAGGTGTCTTACGCCAGCTTGA... | 37,910 |
OK017801.1 | Sarbecovirus sp. | Wu,Z., Han,Y., Wang,Y., Liu,B., Zhao,L., Zhang,J., Su,H., Zhao,W., Liu,L., Bai,S., Dong,J., Sun,L., Zhu,Y., Zhou,S., Song,Y., Sui,H., Yang,J., Wang,J., Zhang,S., Qian,Z., Jin,Q. | Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College, NHC Key Laboratory of Systems Biology of Pathogens | null | 2021-09-22 | HB2020D | Sarbecovirus sp. | Betacoronavirus | Coronaviridae | ssRNA(+) | 29,552 | GenBank | 1 | China: Hubei | China | Rhinolophus | null | 2020-07 | null | null | Sarbecovirus sp. isolate HB2020D, complete genome | ATCTTTACTGTCGTTGACAAGAAACGAGTAACTCGTCCCTCTTCTGCAGACTGTTCACGGTTTCGCCCGTGTTGCAGTCGATCATCAGCATACCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTTCTTGGTGTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTCTTCAGGTTAGAGACGTGCTAGTGCGTGGCTTCGGGGACTCTGTGGAAGAGGCCCTATCGGAGGCACGTGAACACCTTAAAAATGGCACTTGTGGCCTAGTAGAGCTGGAAAAAGGTGTGCTGCCGCAGCTTGA... | 37,911 |
OK017802.1 | Sarbecovirus sp. | Wu,Z., Han,Y., Wang,Y., Liu,B., Zhao,L., Zhang,J., Su,H., Zhao,W., Liu,L., Bai,S., Dong,J., Sun,L., Zhu,Y., Zhou,S., Song,Y., Sui,H., Yang,J., Wang,J., Zhang,S., Qian,Z., Jin,Q. | Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College, NHC Key Laboratory of Systems Biology of Pathogens | null | 2021-09-22 | HB2020E | Sarbecovirus sp. | Betacoronavirus | Coronaviridae | ssRNA(+) | 29,544 | GenBank | 1 | China: Hubei | China | Rhinolophus | null | 2020-07 | null | null | Sarbecovirus sp. isolate HB2020E, complete genome | AACTTTACTGTCGTTGACAAGAAACGAGTAACTCGTCCCTCTTCTGCAGACTGCTTACGGTTTCGTCCGTGTTGCAGTCGATCATCAGCACACCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTTCTTGGTGTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTCTTCAGGTTAGAGACGTGCTAGTGCGTGGCTTCGGGGACTCTGTGGAAGAGGCCCTATCGGAGGCACGTGAACACCTTAAAAATGGCACTTGTGGCCTAGTAGAGCTGGAAAAAGGTGTGCTGCCGCAGCTTGA... | 37,912 |
OK017803.1 | Sarbecovirus sp. | Wu,Z., Han,Y., Wang,Y., Liu,B., Zhao,L., Zhang,J., Su,H., Zhao,W., Liu,L., Bai,S., Dong,J., Sun,L., Zhu,Y., Zhou,S., Song,Y., Sui,H., Yang,J., Wang,J., Zhang,S., Qian,Z., Jin,Q. | Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College, NHC Key Laboratory of Systems Biology of Pathogens | null | 2021-09-22 | HN2021A | Sarbecovirus sp. | Betacoronavirus | Coronaviridae | ssRNA(+) | 29,601 | GenBank | 1 | China: Hunan | China | Rhinolophus pusillus | null | 2021-02 | null | null | Sarbecovirus sp. isolate HN2021A, complete genome | TTACTGTCGTTGACAGGACACGAGTAACTCGTCCATCTTCTGCAGGTTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCATACCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTTCAACTCAGTTTGCCTGTCTTACAGGTTCGTGACGTGCTTGTACGTGGCTTTGGAGACTCCGTAGAGGAGGCTTTGTCAGAGGCACGTCAACATCTTAAAGATGGCACTTGTGGCTTAGTAGAAGTTGAAAAAGGTGTTTTACCTCAACTTGAACAG... | 37,913 |
OK017804.1 | Sarbecovirus sp. | Wu,Z., Han,Y., Wang,Y., Liu,B., Zhao,L., Zhang,J., Su,H., Zhao,W., Liu,L., Bai,S., Dong,J., Sun,L., Zhu,Y., Zhou,S., Song,Y., Sui,H., Yang,J., Wang,J., Zhang,S., Qian,Z., Jin,Q. | Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College, NHC Key Laboratory of Systems Biology of Pathogens | null | 2021-09-22 | HN2021B | Sarbecovirus sp. | Betacoronavirus | Coronaviridae | ssRNA(+) | 29,592 | GenBank | 1 | China: Hunan | China | Rhinolophus pusillus | null | 2021-02 | null | null | Sarbecovirus sp. isolate HN2021B, complete genome | TTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGTTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCATACCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTTCAACTCAGTTTGCCTGTCTTACAGGTTCGTGACGTGCTTGTACGTGGCTTTGGAGACTCCGTAGAGGAGGCTTTGTCAGAGGCACGTCAACATCTTAAAGATGGCACTTGTGGCTTAGTAGAAGTTGAAAAAGGTGTTTTACCTCAACTTGAACAG... | 37,914 |
OK017805.1 | Sarbecovirus sp. | Wu,Z., Han,Y., Wang,Y., Liu,B., Zhao,L., Zhang,J., Su,H., Zhao,W., Liu,L., Bai,S., Dong,J., Sun,L., Zhu,Y., Zhou,S., Song,Y., Sui,H., Yang,J., Wang,J., Zhang,S., Qian,Z., Jin,Q. | Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College, NHC Key Laboratory of Systems Biology of Pathogens | null | 2021-09-22 | HN2021G | Sarbecovirus sp. | Betacoronavirus | Coronaviridae | ssRNA(+) | 29,571 | GenBank | 1 | China: Hunan | China | Rhinolophus pusillus | null | 2021-03 | null | null | Sarbecovirus sp. isolate HN2021G, complete genome | TTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGTTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCATACCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGTGACGTGCTTGTACGTGGCTTTGGAGACTCCGTAGAGGAGGCTTTGTCAGAGGCACGTCAACATCTTAAAGATGGCACTTGTGGCTTAGTAGAAGTTGAAAAAGGTGTCTTACCTCAACTTGAACAG... | 37,915 |
NC_003785.2 | Satsuma dwarf virus | Iwanami,T., Kondo,Y., Karasev,A.V. | National Center for Biotechnology Information, NIH | USA | 1999-04-06 | S-58 | Sadwavirus citri | Sadwavirus | Secoviridae | ssRNA(+) | 6,794 | RefSeq | 1 | null | null | null | null | null | null | PRJNA485481 | Satsuma dwarf virus RNA 1, complete sequence | TTGATTCAAGCGAAGCAGAAGCCCTGCAACAAAACTAAATCTTGTCCCTTCTTTCTCTCTCTCTAAGCGACAATCTTTTCTTGCTTTCAAATGACTTCTTTCTTCTCTTGCTCTATGATGTGTGGGATAGCGCCCACACTACGAAACTAGGGATAGCGCCCTAGCTCCGATTATTGGGATAGCGCCCAATATTTTCTGTTAATATTTCGATATTTTCATTTTGTAATTTCGATTACTTATATATAATAAAAACCAAAAAGATTTTCTTATTTCCTTAATTTCTTTTTTGTTTGCTTTTTCATGGAGATCTACGGATTCTC... | 8,761 |
NC_003786.2 | Satsuma dwarf virus | Iwanami,T., Kondo,Y., Karasev,A.V. | National Center for Biotechnology Information, NIH | USA | 1999-04-06 | S-58 | Sadwavirus citri | Sadwavirus | Secoviridae | ssRNA(+) | 5,344 | RefSeq | 1 | null | null | null | null | null | null | PRJNA485481 | Satsuma dwarf virus RNA 2, complete sequence | TTGATTCAAGCGAAGTGGAAGCCCCACACAAAAATCATTCTGTTGTACTCTCTCTCTCTTTCACTGAGTCACATTTACTTTTGATGATGACTTCTTCTTCACTTTTTCTTTCGATGTTCGGGATAGCGCCCGTTCACCACTGATACTAGGGATAGCGCCCTAGTTTCGATTGCTGGGATAGCGCCCAGTTTCTTTTGTTAATATTTCGATATTTTCATTTTGTAATTTCGATTACTTTTCTTTTATATAAAAACCAAAAAGATTTTCCTATTTCTTTGATTTCTTTTTTGTTTATTTCTTTATGGAGATCTACGGATTCT... | 8,762 |
MT344107.1 | Satsuma dwarf virus | Yan,J., Zhang,S., Wu,J., Yang,F., Zhou,Y., Zhou,C., Cao,M. | Citrus Research Institute, Chinese Academy of Agricultural Sciences, National Center for Citrus Virus Exclusion | China | 2020-12-16 | EH1 | Sadwavirus citri | Sadwavirus | Secoviridae | ssRNA(+) | 6,726 | GenBank | null | China | China | Citrus | null | 2018 | null | null | Satsuma dwarf virus isolate EH1 segment RNA1, complete sequence | AAATTTTCAATTTCACTCTCTCTCTCTTTTAAATTTTAAAAGATTTGAAATTCTGATTTCATGTCTATTCTTTCAGTTCACTTTATGATGTGTAGGATAGCGCCTACACTACGAAACTAGGGATAGCGCCCTAGCTCCGATACTGAGGATAGCGCCTCAGCTTGTTTTAAATTTGCACACATATTTCGATTTGTGTTTTATAATTTCGATTATTTTAATATCAAAAACCAAAAAGATTTTACCATTTCTTTCATTTCTTTTTGTTTTAATTCCTTATTTTAATGGAGATCTACGGATTCTCCCCACTCTCCTTCCAGGAC... | 45,148 |
MT344108.1 | Satsuma dwarf virus | Yan,J., Zhang,S., Wu,J., Yang,F., Zhou,Y., Zhou,C., Cao,M. | Citrus Research Institute, Chinese Academy of Agricultural Sciences, National Center for Citrus Virus Exclusion | China | 2020-12-16 | EH1 | Sadwavirus citri | Sadwavirus | Secoviridae | ssRNA(+) | 5,362 | GenBank | null | China | China | Citrus | null | 2018 | null | null | Satsuma dwarf virus isolate EH1 segment RNA2, complete sequence | AAATTTTCAATTTCACTCTTTCTCTCTTTTAAATTTTAAAAGATTTGAAATTCTGATTTCATGTCTATTCTTTCAGCTCACTTTATGATGTGTAGGATAGCGCCTACACTACGAAACTAGGGATAGCGCCCTAGCTCCGATACTGAGGATAGCGCCTCAGCTTGTTTTAAATTTGCACACATATTTCGATTTGTGTTTTGTAATTTCGATTATTTTAATTTTTAAAACCAAAAAGATTTTACTATTTCTCTTATTTCTTTTTTTGTTTTAATTTCTTATCTATATGGAGATTTACGGATTCTCCCCATTCTCCTTCCAGG... | 45,149 |
GU901210.1 | Satsuma dwarf virus | Sun,X., Wu,G., Li,Y. | Southwest University, Lab of Plant Virology, College of Plant Protection | China | 2010-04-14 | FJ | Sadwavirus citri | Sadwavirus | Secoviridae | ssRNA(+) | 5,349 | GenBank | null | China: Chongqing, Fengjie | China | Citrus unshiu | null | 2009-05-20 | null | null | Satsuma dwarf virus isolate FJ segment RNA2, complete sequence | TTGATTCAAGCGAAGTGGAAGCCCCACACAAAAACCATCTTGTTGTACTCTCTCTCTCTCTCACTGAGTCACATTTACTTTTGATGATGACTTCTTCTTCACTTTTTCTTTCGATGTTCGGGATAGCGCCCGTTCACCACTGATACTAGGGATAGCGCCCTAGTTTCGATTGCTGGGATAGCGCCCAGTTTCTTTTGTTAATATTTCGATATTTTCATTTTGTAATTTCGATTACTTTTCTTTTATATTAAATTAAAACCAAAAAGATTTTCCCATTTCTTTGATTTCTTTTTTGTTTATTTCTTTATGGAGATCTACGG... | 101,112 |
NC_003399.1 | Scallion mosaic virus | Che,J., Zheng,H.Y., Chen,J.P., Adams,M.J. | National Center for Biotechnology Information, NIH | USA | 2002-02-06 | null | Scallion mosaic virus | Potyvirus | Potyviridae | ssRNA(+) | 9,324 | RefSeq | 1 | China:Zhejiang: Hangzhou | China | Allium chinense | null | null | null | PRJNA485481 | Scallion mosaic virus, complete genome | AAAATATAAAAACTCAACACAACATACACGAATTGAATGAATTGACAAAATTTGCGTTTATTAGCTCAAATTCACTGCAATTAGCACTTTTCGTAACACACCATTCACAATGGCCGTGGCCACACTACACGCTCCGATAATCCAAACTAATAAAAATTATAAGAAATTAGCAGTTATTCAGTTCGGAGAGAACAAACCAATGTTAATCACTAGGATTAACACTGAGCAGATTAAGATTTCAAAAGCAAGTGATGTGGATCAGGTAATTGCTGGTCACTATAGACACCACAGAGCAAAGTGTAAGGTAGATCAGAATAAAA... | 8,597 |
LC651456.1 | Scallion mosaic virus | Ohshima,K., Kawakubo,S., Muraoka,S., Gao,F., Ishimaru,K., Kayashima,T., Fukuda,S. | Faculty of Agriculture, Laboratory of Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502 | Japan | 2022-03-30 | WOTC465 | Scallion mosaic virus | Potyvirus | Potyviridae | ssRNA(+) | 9,300 | GenBank | 1 | Japan: Tochigi | Japan | Allium macrostemon | plant leaf | 2015 | null | null | Scallion mosaic virus WOTC465 RNA, nearly complete genome | CACGAATTGAATGAATTGACAAAATTTGCGTTTCTTAACTCAAATTCACTGCAATTAGCACTTTTCGTATTCCACCACTCACGATGGCTGCGGTCACATTACACGCTCCGATAATCCAAACTAGTAATAATTATAAGAAGTTGACAGTTATCCAGTTCGGGGAGAACAAACCAATGTTGATCACTAGGATTAACACTGAGCAGATTAAAATTTCAAAAGCAAGTGATGTTGATCAGGTTATTGCTGGTCACTATAGACATCGCAGAGCAAAATCTGAGGCAAGCCAGAATAAAATTGGTGTAGACCAATTGGTTGGACTT... | 31,942 |
LC651457.1 | Scallion mosaic virus | Ohshima,K., Kawakubo,S., Muraoka,S., Gao,F., Ishimaru,K., Kayashima,T., Fukuda,S. | Faculty of Agriculture, Laboratory of Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502 | Japan | 2022-03-30 | WOA294 | Scallion mosaic virus | Potyvirus | Potyviridae | ssRNA(+) | 9,298 | GenBank | 1 | Japan: Aomori | Japan | Allium macrostemon | plant leaf | 2014 | null | null | Scallion mosaic virus WOA294 RNA, nearly complete genome | CACGAATTGAATGAATTGACACAATTTGCGTTTATTAGCTCAAATTCACTGCAATTAGCACTTTTCGTACCTCACCATTCACAATGGCCATGGCCACACTACACGCACCAGTCATGCAAGCTAGTATTAATTACGAGAAATTAGCAGTAATTAAGTTTGGGGACAACAAACCAGTTTTAGTTACCAGAATTAACACTGGACAGATTAGAGTATCGGAAGCAAGCAAGGTGGATCAAGCCATTGTTGGACGTTACAGACACCGCAAAATGAAGTCTAATGTCAAGCAAGTCAGTTTTAGTGTGGAACAGTTAATCGGACTT... | 31,943 |
LC651458.1 | Scallion mosaic virus | Ohshima,K., Kawakubo,S., Muraoka,S., Gao,F., Ishimaru,K., Kayashima,T., Fukuda,S. | Faculty of Agriculture, Laboratory of Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502 | Japan | 2022-03-30 | WOAI216 | Scallion mosaic virus | Potyvirus | Potyviridae | ssRNA(+) | 9,298 | GenBank | 1 | Japan: Aichi | Japan | Allium macrostemon | plant leaf | 2014 | null | null | Scallion mosaic virus WOAI216 RNA, nearly complete genome | CACGAATTGAATGAATTGACATAATTTGCGTTTATTAGCTCAAATTCACTGCAATTAGCACTTTTCGTATTCTACCATTCACAATGGCCACGACCACACTACACGCACCAGTTACGCAGGTTAGCACTGATCATAAGCAGTTAGCAATAATTAAGTTTGGCGACAACAAACCAGTTTTAGTTACCAGAATTAACACTGGACAGATTAGAGTATCAGGCGCAAGTAAGGTTGACCAGGCTATTGTCGGGCATTATAGGCACCACAAGATGGAGTCTGTTGTCAAGCAAAACAGTCTTGGTGTAGAGCAGCTAATTGGACTC... | 31,944 |
LC651459.1 | Scallion mosaic virus | Ohshima,K., Kawakubo,S., Muraoka,S., Gao,F., Ishimaru,K., Kayashima,T., Fukuda,S. | Faculty of Agriculture, Laboratory of Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502 | Japan | 2022-03-30 | WOAI218 | Scallion mosaic virus | Potyvirus | Potyviridae | ssRNA(+) | 9,298 | GenBank | 1 | Japan: Aichi | Japan | Allium macrostemon | plant leaf | 2014 | null | null | Scallion mosaic virus WOAI218 RNA, nearly complete genome | CACGAATTGAATGAATTGACATAATTTGCGTTTATTAGCTCAAATTCACTGCAATTAGCACTTTTCGTATTCTACCATTCACAATGGCCACGACCACACTACACGCACCAGTTACGCAGGTTAGCACTGATCATAAGCAGTTAGCAATAATTAAGTTTGGCGACAACAAACCAGTTTTAGTTACCAGAATTAACACTGGACAGATTAGAGTATCAGGCGCAAGTAAGGTTGACCAGGCTATTGTCGGGCATTATAGGCACCACAAGATGGAGTCTGTTGTCAAGCAAAACAGTCTTGGTGTAGAGCAGCTAATTGGACTC... | 31,945 |
LC651460.1 | Scallion mosaic virus | Ohshima,K., Kawakubo,S., Muraoka,S., Gao,F., Ishimaru,K., Kayashima,T., Fukuda,S. | Faculty of Agriculture, Laboratory of Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502 | Japan | 2022-03-30 | WOC441 | Scallion mosaic virus | Potyvirus | Potyviridae | ssRNA(+) | 9,298 | GenBank | 1 | Japan: Chiba | Japan | Allium macrostemon | plant leaf | 2015 | null | null | Scallion mosaic virus WOC441 RNA, nearly complete genome | CACGAATTGAATGAATTGACAAAATTTGCGTTTCTTAGCTCAAATTCACTGCAATTAGCACTTTTCGTATCCCACCACTCACGATGGCCGCAGTCACATTACACGCTCCGATAATCCAAACTAGCAATAGTTATAAGAAGTCAGCAGTTATCCAGTTCGGAGAGAACAAACCAATGTTGATCACTAGGATTAACACTGAGCAGATTAAGATTTCAAAAGCAAGTGATGTTGATCAGGTTATTGCTGATCACTATAGACATCGCATAGCAAAGTCTGAGGCAAACCAGAATAAAATTGGTGTAGACCAATTGGTTGGACTT... | 31,946 |
LC651461.1 | Scallion mosaic virus | Ohshima,K., Kawakubo,S., Muraoka,S., Gao,F., Ishimaru,K., Kayashima,T., Fukuda,S. | Faculty of Agriculture, Laboratory of Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502 | Japan | 2022-03-30 | WOF98 | Scallion mosaic virus | Potyvirus | Potyviridae | ssRNA(+) | 9,298 | GenBank | 1 | Japan: Fukuoka | Japan | Allium macrostemon | plant leaf | 2013 | null | null | Scallion mosaic virus WOF98 RNA, nearly complete genome | CACGAATTGAATGAATTGACAAAATTTGCGTTTCTTAGCTCAAATTCACTGCAATTAGCACTTTTCGTATTCCACCACTCACGATGGCCGCGGTCACATTACACGCTCCGATAATCCAAACTAGTAATAATTATAAGAAGTTAGCAGTTATCCAGTTCGGGGAGAACAAACCAATGTTGATCACTAGGATTAACACTGAGCAGATTAAAATTTCAAAAGCAAGTGATGTTGATCAGGTTATTGCCGGTCACTATAGACATCGTAGGGCAAAGTCTGAGGCAAGCCAGAATAAAATTGGTGTAGACCAATTGGTTGGACTT... | 31,947 |
LC651462.1 | Scallion mosaic virus | Ohshima,K., Kawakubo,S., Muraoka,S., Gao,F., Ishimaru,K., Kayashima,T., Fukuda,S. | Faculty of Agriculture, Laboratory of Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502 | Japan | 2022-03-30 | WOHR52 | Scallion mosaic virus | Potyvirus | Potyviridae | ssRNA(+) | 9,298 | GenBank | 1 | Japan: Hiroshima | Japan | Allium macrostemon | plant leaf | 2013 | null | null | Scallion mosaic virus WOHR52 RNA, nearly complete genome | CACGAATTGAATGAATTGACAAAATTTGCGTTTCTTAGCTCAAATTCACTGCAATTAGCACTTTTCGTATCCCACCATTCACGATGGCCGCGGTCACACTACACGCTCCAATAATCCAAACTAGCAATAGTTACAAAAAGTTAGCAGTTATCCAGTTCGGAGAGAACAAACCAATGTTGATCACTAGGATTAACACTGGGCAGATTAAGATTTCAAAAGCAAGTGATGTTGATCAGGTTATTGCTGGTCACTATAGACATCGCATAGCAAAGTCTGAGGCAAGCCAGAATAAAATTGGTGTAGACCAATTGATTGGACTT... | 31,948 |
LC651463.1 | Scallion mosaic virus | Ohshima,K., Kawakubo,S., Muraoka,S., Gao,F., Ishimaru,K., Kayashima,T., Fukuda,S. | Faculty of Agriculture, Laboratory of Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502 | Japan | 2022-03-30 | WOIW305 | Scallion mosaic virus | Potyvirus | Potyviridae | ssRNA(+) | 9,298 | GenBank | 1 | Japan: Iwate | Japan | Allium macrostemon | plant leaf | 2014 | null | null | Scallion mosaic virus WOIW305 RNA, nearly complete genome | CACGAATTGAATGAATTGACATAATTTGCGTTTATTAGCTCAAATTCACTGCAATTAGCACTTTTCGTACCTCACCATTCACAATGGCCATGACCACACTACACGCACCAGTCATGCAATCTAGTATTAATTATGAGAAATTAGCAGTAATTAAGTTTGGGGACAACAAACCAGTTTTGGTAACCAGAATCAACACTGGACAGATTAGAATATCGGAGGCAAGCAAGGTGGATCAAGCCATTGTTGGACGTTACAGACACCACAAGATGAAGACTAATGTCAAGCAAGGCAGCTTTAGTGTGGACCAGTTAATCGGACTT... | 31,949 |
LC651464.1 | Scallion mosaic virus | Ohshima,K., Kawakubo,S., Muraoka,S., Gao,F., Ishimaru,K., Kayashima,T., Fukuda,S. | Faculty of Agriculture, Laboratory of Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502 | Japan | 2022-03-30 | WOK140 | Scallion mosaic virus | Potyvirus | Potyviridae | ssRNA(+) | 9,298 | GenBank | 1 | Japan: Kumamoto | Japan | Allium macrostemon | plant leaf | 2014 | null | null | Scallion mosaic virus WOK140 RNA, nearly complete genome | CACGAATTGAATGAATTGACAAAATTTGCGTTTCTTAGCTCAAATTCACTGCAATTAGCACTTTTCGTATTCCACCACTCACGATGGCCGCGGTCACATTACACGCTCCGATAATCCAAACTAGTAGTAATTATAAGAAGTTAGCAGTTATCCAGTTCGGGGAGAATAAACCAATGTTGATCACTAGGATTAACACTGAGCAGATTAAAATCTCAAAAGCAAGTGATGTTGATCAGGTTATTGCTGGTCACTATAGACATCGCAGAGCAAAGTCTGAGGCAAGCCAGAACAAAATTGGTGTAGACCAATTGGTTGGACTT... | 31,950 |
LC651465.1 | Scallion mosaic virus | Ohshima,K., Kawakubo,S., Muraoka,S., Gao,F., Ishimaru,K., Kayashima,T., Fukuda,S. | Faculty of Agriculture, Laboratory of Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502 | Japan | 2022-03-30 | WOKG131 | Scallion mosaic virus | Potyvirus | Potyviridae | ssRNA(+) | 9,298 | GenBank | 1 | Japan: Kagoshima | Japan | Allium macrostemon | plant leaf | 2013 | null | null | Scallion mosaic virus WOKG131 RNA, nearly complete genome | TACGAATCGAATGAATTGACACAATTTGCGTTTATTAGCTCAAATTCACTGCAATTAGCACTTTTCGTAGCCCACCATTCACCATGGCTTTGGCCGTTCCACAAACAGTAGTTATGCGAACTAGTAGTAAGAGCGAGAAGCTATCAGTAATTCAATTTGGTACAAATAAACCAGTGTTAGTCACGAGAGTTAACGCTGGACAAATAAAAATCTCAAAAGCAAGTAAAATGGACCAAGCCATAGTTGGCCATTATAAGCACCGCAGTGCAAAATCTGGGGTGAGCCAGGAGAAGATCAGTGTGGACCAACTAGTAGGGCTT... | 31,951 |
LC651466.1 | Scallion mosaic virus | Ohshima,K., Kawakubo,S., Muraoka,S., Gao,F., Ishimaru,K., Kayashima,T., Fukuda,S. | Faculty of Agriculture, Laboratory of Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502 | Japan | 2022-03-30 | WOKN375 | Scallion mosaic virus | Potyvirus | Potyviridae | ssRNA(+) | 9,298 | GenBank | 1 | Japan: Kanagawa | Japan | Allium macrostemon | plant leaf | 2014 | null | null | Scallion mosaic virus WOKN375 RNA, nearly complete genome | TACGAATCGAATGAATTGACACAATTTGCGTTTATTAGCTCAAATTCACTGCAATTAGCACTTTTCGTAGCCCACCATTCACCATGGCTTTGGCCGTTCCACAAACAGTAGTTATGCGAACTAGTAGTAAGAGCGAGAAGCTATCAGTAATTCAGTTTGGTACAAATAAACCAGTGTTAGTCACGAGAGTTAACGCTGGACAAATAAAAATCTCAAAAGCAAGTAAAATGGACCAAGCCATAGTTGGCCATTATAAGCACCGCAGTGCAAAATCTGGGGTGAGCCAGGAGAAGATCAGTGTGGACCAACTAGTAGGACTT... | 31,952 |
LC651467.1 | Scallion mosaic virus | Ohshima,K., Kawakubo,S., Muraoka,S., Gao,F., Ishimaru,K., Kayashima,T., Fukuda,S. | Faculty of Agriculture, Laboratory of Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502 | Japan | 2022-03-30 | WOKN438 | Scallion mosaic virus | Potyvirus | Potyviridae | ssRNA(+) | 9,298 | GenBank | 1 | Japan: Kanagawa | Japan | Allium macrostemon | plant leaf | 2015 | null | null | Scallion mosaic virus WOKN438 RNA, nearly complete genome | CACGAATTGAATGAATTGACAAAATTTGCGTTTCTTAGCTCAAATTCACTGCAATTAGCACTTTTCGTACCCCACCACTCACGATGGCCGCGGTCACATTACACGCCCCGATAATCCAAACTAGCAATAATTATAAGAAGTTAGCAGTTATCCAGTTCGGAGAGAACAAACCAATGTTGATCACTAGGATTAACACTGAGCAGATTAAGATTTCAAAAGCAAGTGATGTTGATCAGGTTATTGTTGATCACTATAGACATCGCATAGCAAAGTCTGAGACAAGCCAGAATAAAATTGGTGTAGACCAATTAGTTGGACTT... | 31,953 |
LC651468.1 | Scallion mosaic virus | Ohshima,K., Kawakubo,S., Muraoka,S., Gao,F., Ishimaru,K., Kayashima,T., Fukuda,S. | Faculty of Agriculture, Laboratory of Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502 | Japan | 2022-03-30 | WOKN613 | Scallion mosaic virus | Potyvirus | Potyviridae | ssRNA(+) | 9,298 | GenBank | 1 | Japan: Kanagawa | Japan | Allium macrostemon | plant leaf | 2015 | null | null | Scallion mosaic virus WOKN613 RNA, nearly complete genome | CACGAATTGAATGAATTGACAAAATTTGCGTTTCTTAGCTCAAATTCACTGCAATTAGCACTTTTCGTACCCCACCACTCACGATGGCCGCGGTCACATTACACGCCCCGATAATCCAAACTAGCAATAATTATAAGAAGTTAGCAGTTATCCAGTTCGGAGAGAACAAACCAATGTTGATCACTAGGATTAACACTAAGCAAATTAAGATTGCAAAAGCAAGTGAAGTTGATCAGGTTACTGCTGATCACTATAGACATCGCATAGCAAAGTCTGAGGCAAGCCAGAATAAAATTGGAGTAGACCAATTGGTTGGACTT... | 31,954 |
LC651469.1 | Scallion mosaic virus | Ohshima,K., Kawakubo,S., Muraoka,S., Gao,F., Ishimaru,K., Kayashima,T., Fukuda,S. | Faculty of Agriculture, Laboratory of Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502 | Japan | 2022-03-30 | WOKW282 | Scallion mosaic virus | Potyvirus | Potyviridae | ssRNA(+) | 9,298 | GenBank | 1 | Japan: Kagawa | Japan | Allium macrostemon | plant leaf | 2014 | null | null | Scallion mosaic virus WOKW282 RNA, nearly complete genome | CACGAATTGAATGAATTGACAAAATTTGCGTTTCTTAGCTCAAATTCACTGCAATTAGCACTTTTCGTATTCCACCACTCACGATGGCCGCGGTCACATTACACGCTCCGATAATCCAAACTAGTAATAATTATAAGAAGTTAGCAGTTATCCAGTTCGGGGAGAACAAACCAATGTTGATCACTAGGATTAACACTGAGCAGATTAAAATTTCAAAAGCAAGTGATGTTGATCAGGTTATTGCTGGTCACTATAGACATCGCAGAGCAAAATCTGAGACGAATCAGAATAAAATTGGTGTAGACCAGTTGGTTGGACTT... | 31,955 |
LC651470.1 | Scallion mosaic virus | Ohshima,K., Kawakubo,S., Muraoka,S., Gao,F., Ishimaru,K., Kayashima,T., Fukuda,S. | Faculty of Agriculture, Laboratory of Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502 | Japan | 2022-03-30 | WOM206 | Scallion mosaic virus | Potyvirus | Potyviridae | ssRNA(+) | 9,298 | GenBank | 1 | Japan: Miyazaki | Japan | Allium macrostemon | plant leaf | 2014 | null | null | Scallion mosaic virus WOM206 RNA, nearly complete genome | CACGAATTGAATGAATTGACAAAATTTGCGTTTCTTAGCTCAAATTCACTGCAATTAGCACTTTTCGTATCCCACTACTCACGATGGCCGCGGTCACATTACACGCTCCAATAATCCAAACTAGCAATAGTTATAAGAAGTTAGCAGTTATTCAGTTCGGAGAGAACAAACCAATGTTGATCACTAGGATTAACACTGGTCAGATTAAGATTTCAAAAGCAAGTGATGTTGATCAGGTTATTGCTGATCACTATAGACATCGCATAGCAAAGTCTGAAGCAAGCCAGAATAAAATTGGTGTAGATCAATTGGTTGGACTT... | 31,956 |
LC651471.1 | Scallion mosaic virus | Ohshima,K., Kawakubo,S., Muraoka,S., Gao,F., Ishimaru,K., Kayashima,T., Fukuda,S. | Faculty of Agriculture, Laboratory of Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502 | Japan | 2022-03-30 | WOM210 | Scallion mosaic virus | Potyvirus | Potyviridae | ssRNA(+) | 9,298 | GenBank | 1 | Japan: Miyazaki | Japan | Allium macrostemon | plant leaf | 2014 | null | null | Scallion mosaic virus WOM210 RNA, nearly complete genome | CACGAATTGAATGAATTGACAAAATTTGCGTTTCTTAGCTCAAATTCACTGCAATTAGCACTTTTCGTATTCCACCACTCACGATGGCCGCGGTCACATTACACGCTCCGATAATCCAAACTAGTAATAATTACAAGAAGTTAGCAGTTATCCAGTTCGGGGAGAACAAACCAATGTTGATCACTAGGATTAACACTGAGCAGATCAAAATTTCAAAAGCAAGTGATGTTGATCAGGTTATTGCTGGTCACTATAGACATCGCAGAGCAAAGTTTGAGGCAAGCCAGAATAAAATTGGTGTAGACCAATTGGTTGGACTT... | 31,957 |
LC651472.1 | Scallion mosaic virus | Ohshima,K., Kawakubo,S., Muraoka,S., Gao,F., Ishimaru,K., Kayashima,T., Fukuda,S. | Faculty of Agriculture, Laboratory of Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502 | Japan | 2022-03-30 | WONS12 | Scallion mosaic virus | Potyvirus | Potyviridae | ssRNA(+) | 9,298 | GenBank | 1 | Japan: Saga | Japan | Allium macrostemon | plant leaf | 2012 | null | null | Scallion mosaic virus WONS12 RNA, nearly complete genome | CACGAATTGAATGAATTGACAAAATTTGCGTTTCTTAGCTCAAATTCACTGCAATTAGCACTTTTCGTATTCCACCACTCACGATGGCCGCGGTCACATTACACGCTCCGATAATCCAAACTAGTAATAATTATAAGAAGTTATCAGTTATCCAGTTCGGGAAGAACAAACCAATGTTGATCACTAGGATTAACACTAAGCAGATTAAAATTTCAAAAGCAAGTGATGTCGATCAGGTTGTTGCTGGTCACTATAGACATCGCAGAGCAAGGTCTGAGGCAAGCCAGAATAAAATTGGTGTAGACCAATTGGTTGGGCTT... | 31,958 |
LC651473.1 | Scallion mosaic virus | Ohshima,K., Kawakubo,S., Muraoka,S., Gao,F., Ishimaru,K., Kayashima,T., Fukuda,S. | Faculty of Agriculture, Laboratory of Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502 | Japan | 2022-03-30 | WON223 | Scallion mosaic virus | Potyvirus | Potyviridae | ssRNA(+) | 9,298 | GenBank | 1 | Japan: Nagasaki | Japan | Allium macrostemon | plant leaf | 2014 | null | null | Scallion mosaic virus WON223 RNA, nearly complete genome | CACGAATTGAATGAATTGACAAAATTTGCGTTTCTTAGCTCAAATTCACTGCAATTAGCACTTTTCGTATTCCACCACTCACGATGGCCGCGGTCACATTACACGCTCCGATAATCCAAACTAGTAGCAATTATAAGAAGTTAGCAGTTATCCAGTTCGGGGAGAACAAACCAATGTTGATCACTAGGATTAACACTGAGCAGATTAAAATTTCAAAAGCAAGTGATGTTGATCAGGTTATTGCTGATCACTATAGACATCGCAGAGCAAAGTCTGAGGCAAGCCAGAATAAAATTGGTGTAGACCAATTGGTTGGACTT... | 31,959 |
LC651474.1 | Scallion mosaic virus | Ohshima,K., Kawakubo,S., Muraoka,S., Gao,F., Ishimaru,K., Kayashima,T., Fukuda,S. | Faculty of Agriculture, Laboratory of Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502 | Japan | 2022-03-30 | WON224 | Scallion mosaic virus | Potyvirus | Potyviridae | ssRNA(+) | 9,298 | GenBank | 1 | Japan: Nagasaki | Japan | Allium macrostemon | plant leaf | 2014 | null | null | Scallion mosaic virus WON224 RNA, nearly complete genome | CACGAATTGAATGAATTGACAAAATTTGCGTTTCTTAGCTCAAATTCACTGCAATTAGCACTTTTCGTATCCCACCACTCACGATGGCCGCGGTCACATTACACGCTCCGATAATCCAAACTAGCAATAGTTATAAGAAGTTAGCAGTTATCCAGTTCGGAGAGAACAAACCAATGTTGATCACTAGGATTAACACTGAGCAGATTAAGATTTCAAAAGCAAGTGATGTTGATCAGGTTATTGCTGGTCACTATAGACATCGCATAGCAAAGTCTGAGGCAAGCCAGAATAAAATTGGTGTAGACCAATTGGTTGGACTT... | 31,960 |
NC_043583.1 | Schmallenberg virus | Hulst,M., Kortekaas,J., Hakze-van der Honing,R., Vastenhouw,S., Cornellissen,J., van Maanen,K., Bossers,A., Harders,F., Stockhofe,N., van der Poel,W. | National Center for Biotechnology Information, NIH | USA | 2019-06-28 | F6 | Orthobunyavirus schmallenbergense | Orthobunyavirus | Peribunyaviridae | ssRNA(-) | 6,882 | RefSeq | 1 | Netherlands | Netherlands | Bos taurus | null | 2011 | null | PRJNA485481 | Schmallenberg virus isolate F6 segment L, complete sequence | AGTAGTGTACCCCTAATTACAATCACTATGGAGACATACAAGATTAACATTTTTAGAGATAGGATCAACCAGTGTCGAAGTGCTGAAGAAGCCAAAGACATTGTTGCTGATCTTCTCATGGCTAGACATGACTACTTTGGTAGAGAGGTATGTTATTACCTGGATATCGAATTCCGGCAGGATGTTCCAGCTTACGACATACTTCTTGAATTTCTGCCAGCTGGCACTGCTTTCAACATTCGCAATTGTACACCAGACAATTTTATCATTCACAATGGCAAGCTTTATATCATTGACTATAAAGTATCAACTGATCATGC... | 3,458 |
KM047416.1 | Schmallenberg virus | Hofmann,M.A., Mader,M., Fluckiger,F., Renzullo,S. | Institute of Virology and Immunology IVI, Development | Switzerland | 2015-01-21 | 79.4 | Orthobunyavirus schmallenbergense | Orthobunyavirus | Peribunyaviridae | ssRNA(-) | 6,864 | GenBank | 1 | Switzerland: Muehleberg, BE | Switzerland | Bos taurus | blood | 2012-07-20 | null | null | Schmallenberg virus isolate 79.4 segment L, complete sequence | CTAATTACAATCACTATGGAGACATACAAGATTAACATTTTTAGAGATAGGATCAACCAGTGTCGAAGTGCTGAAGAAGCCAAAGACATTGTTGCTGATCTTCTCATGGCTAGACATGACTACTTTGGTAGAGAGGTATGTTATTACCTGGATATCGAATTCCGGCAGGATGTTCCAGCTTACGACATACTTCTTGAATTTCTGCCAGCTGGCACTGCTTTCAACATTCGCAATTGTACACCAGACAATTTTATCATTCACAATGGCAAGCTTTATATCATTGACTATAAAGTATCAACTGATCATGCATATGGTCAAAA... | 88,094 |
KC355454.1 | Schmallenberg virus | Hulst,M., Kortekaas,J., Hakze-van der Honing,R., Vastenhouw,S., Cornellissen,J., van Maanen,K., Bossers,A., Harders,F., Stockhofe,N., van der Poel,W. | Central Veterinary Institute of Wageningen UR (CVI), Virology Department | Netherlands | 2013-09-01 | HL1 | Orthobunyavirus schmallenbergense | Orthobunyavirus | Peribunyaviridae | ssRNA(-) | 6,882 | GenBank | 1 | Netherlands | Netherlands | Ovis aries | brain | 2011 | null | null | Schmallenberg virus isolate HL1 segment L, complete sequence | AGTAGTGTACCCCTAATTACAATCACTATGGAGACATACAAGATTAACATTTTTAGAGATAGGATCAACCAGTGTCGAAGTGCTGAAGAAGCCAAAGACATTGTTGCTGATCTTCTCATGGCTAGACATGACTACTTTGGTAGAGAGGTATGTTATTACCTGGATATCGAATTCCGGCAGGATGTTCCAGCTTACGACATACTTCTTGAATTTCTGCCAGCTGGCACTGCTTTCAACATTCGCAATTGTACACCAGACAATTTTATCATTCACAATGGCAAGCTTTATATCATTGACTATAAAGTATCAACTGATCATGC... | 93,299 |
KC355457.1 | Schmallenberg virus | Hulst,M., Kortekaas,J., Hakze-van der Honing,R., Vastenhouw,S., Cornellissen,J., van Maanen,K., Bossers,A., Harders,F., Stockhofe,N., van der Poel,W. | Central Veterinary Institute of Wageningen UR (CVI), Virology Department | Netherlands | 2013-09-01 | F6 | Orthobunyavirus schmallenbergense | Orthobunyavirus | Peribunyaviridae | ssRNA(-) | 6,882 | GenBank | 1 | Netherlands | Netherlands | Bos taurus | null | 2011 | null | null | Schmallenberg virus isolate F6 segment L, complete sequence | AGTAGTGTACCCCTAATTACAATCACTATGGAGACATACAAGATTAACATTTTTAGAGATAGGATCAACCAGTGTCGAAGTGCTGAAGAAGCCAAAGACATTGTTGCTGATCTTCTCATGGCTAGACATGACTACTTTGGTAGAGAGGTATGTTATTACCTGGATATCGAATTCCGGCAGGATGTTCCAGCTTACGACATACTTCTTGAATTTCTGCCAGCTGGCACTGCTTTCAACATTCGCAATTGTACACCAGACAATTTTATCATTCACAATGGCAAGCTTTATATCATTGACTATAAAGTATCAACTGATCATGC... | 93,300 |
KC139362.1 | Schmallenberg virus | Coupeau,D., Claine,F., Wiggers,L., Kirschvink,N., Muylkens,B. | University of Namur (FUNDP), Veterinary Integrated Research Unit (URVI) | Belgium | 2013-02-03 | Na1-CNS | Orthobunyavirus schmallenbergense | Orthobunyavirus | Peribunyaviridae | ssRNA(-) | 6,882 | GenBank | 1 | Belgium | Belgium | Ovis aries | null | 2012-01 | null | null | Schmallenberg virus strain Na1 isolate Na1-CNS RNA-dependent RNA polymerase gene, complete cds | AGTAGTGTACCCCTAATTACAATCACTATGGAGACATACAAGATTAACATTTTTAGAGATAGGATCAACCAGTGTCGAAGTGCTGAAGAAGCCAAAGACATTGTTGCTGATCTTCTCATGGCTAGACATGACTACTTTGGTAGAGAGGTATGTTATTACCTGGATATCGAATTCCGGCAGGATGTTCCAGCTTACGACATACTTCTTGAATTTCTGCCAGCTGGCACTGCTTTCAACATTCGCAATTGTACACCAGACAATTTTATCATTCACAATGGCAAGCTTTATATCATTGACTATAAAGTATCAACTGATCATGC... | 95,281 |
KC139363.1 | Schmallenberg virus | Coupeau,D., Claine,F., Wiggers,L., Kirschvink,N., Muylkens,B. | University of Namur (FUNDP), Veterinary Integrated Research Unit (URVI) | Belgium | 2013-02-03 | Na1-BHK21-P2 | Orthobunyavirus schmallenbergense | Orthobunyavirus | Peribunyaviridae | ssRNA(-) | 6,882 | GenBank | 1 | Belgium | Belgium | Ovis aries | null | 2012-01 | null | null | Schmallenberg virus strain Na1 isolate Na1-BHK21-P2 RNA-dependent RNA polymerase gene, complete cds | AGTAGTGTACCCCTAATTACAATCACTATGGAGACATACAAGATTAACATTTTTAGAGATAGGATCAACCAGTGTCGAAGTGCTGAAGAAGCCAAAGACATTGTTGCTGATCTTCTCATGGCTAGACATGACTACTTTGGTAGAGAGGTATGTTATTACCTGGATATCGAATTCCGGCAGGATGTTCCAGCTTACGACATACTTCTTGAATTTCTGCCAGCTGGCACTGCTTTCAACATTCGCAATTGTACACCAGACAATTTTATCATTCACAATGGCAAGCTTTATATCATTGACTATAAAGTATCAACTGATCATGC... | 95,282 |
KC139364.1 | Schmallenberg virus | Coupeau,D., Claine,F., Wiggers,L., Kirschvink,N., Muylkens,B. | University of Namur (FUNDP), Veterinary Integrated Research Unit (URVI) | Belgium | 2013-02-03 | Na1-BHK21-P10 | Orthobunyavirus schmallenbergense | Orthobunyavirus | Peribunyaviridae | ssRNA(-) | 6,882 | GenBank | 1 | Belgium | Belgium | Ovis aries | null | 2012-01 | null | null | Schmallenberg virus strain Na1 isolate Na1-BHK21-P10 RNA-dependent RNA polymerase gene, complete cds | AGTAGTGTACCCCTAATTACAATCACTATGGAGACATACAAGATTAACATTTTTAGAGATAGGATCAACCAGTGTCGAAGTGCTGAAGAAGCCAAAGACATTGTTGCTGATCTTCTCATGGCTAGACATGACTACTTTGGTAGAGAGGTATGTTATTACCTGGATATCGAATTCCGGCAGGATGTTCCAGCTTACGACATACTTCTTGAATTTCTGCCAGCTGGCACTGCTTTCAACATTCGCAATTGTACACCAGACAATTTTATCATTCACAATGGCAAGCTTTATATCATTGACTATAAAGTATCAACTGATCATGC... | 95,283 |
KC139365.1 | Schmallenberg virus | Coupeau,D., Claine,F., Wiggers,L., Kirschvink,N., Muylkens,B. | University of Namur (FUNDP), Veterinary Integrated Research Unit (URVI) | Belgium | 2013-02-03 | Na2-CNS | Orthobunyavirus schmallenbergense | Orthobunyavirus | Peribunyaviridae | ssRNA(-) | 6,882 | GenBank | 1 | Belgium | Belgium | Ovis aries | null | 2012-01 | null | null | Schmallenberg virus strain Na2 isolate Na2-CNS RNA-dependent RNA polymerase gene, complete cds | AGTAGTGTACCCCTAATTACAATCACTATGGAGACATACAAGATTAACATTTTTAGAGATAGGATCAACCAGTGTCGAAGTGCTGAAGAAGCCAAAGACATTGTTGCTGATCTTCTCATGGCTAGACATGACTACTTTGGTAGAGAGGTATGTTATTACCTGGATATCGAATTCCGGCAGGATGTTCCAGCTTACGACATACTTCTTGAATTTCTGCCAGCTGGCACTGCTTTCAACATTCGCAATTGTACACCAGACAATTTTATCATTCACAATGGCAAGCTTTATATCATTGACTATAAAGTATCAACTGATCATGT... | 95,284 |
KC139366.1 | Schmallenberg virus | Coupeau,D., Claine,F., Wiggers,L., Kirschvink,N., Muylkens,B. | University of Namur (FUNDP), Veterinary Integrated Research Unit (URVI) | Belgium | 2013-02-03 | Na2-BHK21-P2 | Orthobunyavirus schmallenbergense | Orthobunyavirus | Peribunyaviridae | ssRNA(-) | 6,882 | GenBank | 1 | Belgium | Belgium | Ovis aries | null | 2012-01 | null | null | Schmallenberg virus strain Na2 isolate Na2-BHK21-P2 RNA-dependent RNA polymerase gene, complete cds | AGTAGTGTACCCCTAATTACAATCACTATGGAGACATACAAGATTAACATTTTTAGAGATAGGATCAACCAGTGTCGAAGTGCTGAAGAAGCCAAAGACATTGTTGCTGATCTTCTCATGGCTAGACATGACTACTTTGGTAGAGAGGTATGTTATTACCTGGATATCGAATTCCGGCAGGATGTTCCAGCTTACGACATACTTCTTGAATTTCTGCCAGCTGGCACTGCTTTCAACATTCGCAATTGTACACCAGACAATTTTATCATTCACAATGGCAAGCTTTATATCATTGACTATAAAGTATCAACTGATCATGT... | 95,285 |
KC139367.1 | Schmallenberg virus | Coupeau,D., Claine,F., Wiggers,L., Kirschvink,N., Muylkens,B. | University of Namur (FUNDP), Veterinary Integrated Research Unit (URVI) | Belgium | 2013-02-03 | Na2-BHK21-P10 | Orthobunyavirus schmallenbergense | Orthobunyavirus | Peribunyaviridae | ssRNA(-) | 6,882 | GenBank | 1 | Belgium | Belgium | Ovis aries | null | 2012-01 | null | null | Schmallenberg virus strain Na2 isolate Na2-BHK21-P10 RNA-dependent RNA polymerase gene, complete cds | AGTAGTGTACCCCTAATTACAATCACTATGGAGACATACAAGATTAACATTTTTAGAGATAGGATCAACCAGTGTCGAAGTGCTGAAGAAGCCAAAGACATTGTTGCTGATCTTCTCATGGCTAGACATGACTACTTTGGTAGAGAGGTATGTTATTACCTGGATATCGAATTCCGGCAGGATGTTCCAGCTTACGACATACTTCTTGAATTTCTGCCAGCTGGCACTGCTTTCAACATTCGCAATTGTACACCAGACAATTTTATCATTCACAATGGCAAGCTTTATATCATTGACTATAAAGTATCAACTGATCATGT... | 95,286 |
NC_076636.1 | Sclerotinia sclerotiorum hypovirus 2 | He,G., Zhou,Z., Wu,M., Zhang,J., Yang,L., Li,G. | National Center for Biotechnology Information, NIH | USA | 2023-05-04 | null | Thetahypovirus sclerotiniae | Thetahypovirus | Hypoviridae | ssRNA(+) | 15,249 | RefSeq | null | China | China | Botrytis cinerea | null | 2013 | null | PRJNA485481 | Sclerotinia sclerotiorum hypovirus 2 strain SsHv2.HBstr-470, complete genome | TTTTGGGGATGGTGCTCTTAGGTTTGATCTTTGTAGATCCTAACTAGGAGGAAACATTGCCCTGTTTCGTGATGATTTCTATGTTCAATCACTGAAGCTTCTCTTCACCAAAAAGGAGAGAGCTTCGAGAGCTTAGCTGTTTCAGCTATTTGAACCCCGAAGGATTCATGTCTAAGACATTTGGTTTCTATTCAGAAACTATTCATTCTTTCATCCGAAGATGTAAAACTACTTCGTAGTAACGAGACGGTCCTGAACCCTGACATGTGGAACGGCGACGACAGGCATTCTGTGGAGTAGTGTCCTAGAAGAATGATCCC... | 569 |
NC_022896.1 | Sclerotinia sclerotiorum hypovirus 2 | Khalifa,M.E. | National Center for Biotechnology Information, NIH | USA | 2013-11-26 | 5472 | Thetahypovirus sclerotiniae | Thetahypovirus | Hypoviridae | ssRNA(+) | 14,581 | RefSeq | null | New Zealand | New Zealand | Sclerotinia sclerotiorum | null | 1969-11-01 | null | PRJNA485481 | Sclerotinia sclerotiorum hypovirus 2 isolate 5472, complete genome | TTTTTGGGGATGGTACTCTCAGGTTTGATCTTTGTAGATCCTAACTAAGAGGAAACATTGCCCTGTTTCGTGATGATTTCTATGTTCAATCACTGAAGCTTCTCTTCACCAAAAAGGAGAGAGCTTCGAGAGCTTAGCTGTTTCAGCTATTTGAACCCCGAAGGATTCATGTCTAAGACATTTGGTTTCTATTCAGAAACTGTTCATTCTTTCATCCGAAGATGTAAAACTACTTCGTAGTAACGAGATGGTCCTGAACCCTGACATGTAGAACGGCGACGACAGGCATTCTGTGGAGTAGTGTCCTAGAAGAATGATCC... | 6,757 |
MH347276.1 | Sclerotinia sclerotiorum hypovirus 2 | He,G., Zhou,Z., Wu,M., Zhang,J., Yang,L., Li,G. | Plant Protection, Huazhong Agricultural University | China | 2019-02-11 | null | Thetahypovirus sclerotiniae | Thetahypovirus | Hypoviridae | ssRNA(+) | 15,249 | GenBank | null | China | China | Botrytis cinerea | null | 2013 | null | null | Sclerotinia sclerotiorum hypovirus 2 strain SsHv2.HBstr-470, complete genome | TTTTGGGGATGGTGCTCTTAGGTTTGATCTTTGTAGATCCTAACTAGGAGGAAACATTGCCCTGTTTCGTGATGATTTCTATGTTCAATCACTGAAGCTTCTCTTCACCAAAAAGGAGAGAGCTTCGAGAGCTTAGCTGTTTCAGCTATTTGAACCCCGAAGGATTCATGTCTAAGACATTTGGTTTCTATTCAGAAACTATTCATTCTTTCATCCGAAGATGTAAAACTACTTCGTAGTAACGAGACGGTCCTGAACCCTGACATGTGGAACGGCGACGACAGGCATTCTGTGGAGTAGTGTCCTAGAAGAATGATCCC... | 65,401 |
KJ561218.1 | Sclerotinia sclerotiorum hypovirus 2 | Hu,Z., Wu,S., Cheng,J., Fu,Y., Jiang,D., Xie,J. | Huazhong Agricultural University, Plant Pathology, College of Plant Science and Technology | China | 2014-06-03 | SX247 | Thetahypovirus sclerotiniae | Thetahypovirus | Hypoviridae | ssRNA(+) | 15,239 | GenBank | null | China | China | Sclerotinia sclerotiorum | null | 2010-05-01 | null | null | Sclerotinia sclerotiorum hypovirus 2 isolate SX247, complete genome | TTGGGGATGGTACTCTTAGGTTTGATCTTTGTAGATCCTAACTAGGAGGAAACATTGCCCTGTTTCGTGATGATTTCTATGTTCAATCACTGAAGCTTCTCTTCACCAAAAAGGAGAGAGCTTCGAGAGCTTAGCTGTTTCAGCTATTTGAACCCCGAAGGATTCATGTCTAAGACATTTGGTTTCTATTCAGAAACTGTTCATTCTTTCATCCGAAGATGTAAAACTACTTCGTAGTAACGAGACGGTCCTGAACCCTGACATGTGGAACGGCGACGACAGGCATTCTGTGGAGTAGTGTCCTAGAAGAATGATCCCCT... | 90,215 |
KF525367.1 | Sclerotinia sclerotiorum hypovirus 2 | Khalifa,M.E. | The University of Auckland, School of Biological Sciences | New Zealand | 2013-11-23 | 5472 | Thetahypovirus sclerotiniae | Thetahypovirus | Hypoviridae | ssRNA(+) | 14,581 | GenBank | null | New Zealand | New Zealand | Sclerotinia sclerotiorum | null | 1969-11-01 | null | null | Sclerotinia sclerotiorum hypovirus 2 isolate 5472, complete genome | TTTTTGGGGATGGTACTCTCAGGTTTGATCTTTGTAGATCCTAACTAAGAGGAAACATTGCCCTGTTTCGTGATGATTTCTATGTTCAATCACTGAAGCTTCTCTTCACCAAAAAGGAGAGAGCTTCGAGAGCTTAGCTGTTTCAGCTATTTGAACCCCGAAGGATTCATGTCTAAGACATTTGGTTTCTATTCAGAAACTGTTCATTCTTTCATCCGAAGATGTAAAACTACTTCGTAGTAACGAGATGGTCCTGAACCCTGACATGTAGAACGGCGACGACAGGCATTCTGTGGAGTAGTGTCCTAGAAGAATGATCC... | 92,479 |
OL364850.1 | Seli virus | Vucak,M., Nichols,J., Davison,A.J., Hughes,J., da Silva Filipe,A. | University of Glasgow, Centre for Virus Research | United Kingdom | 2022-01-18 | null | Seli virus | null | null | unknown | 7,160 | GenBank | null | Sierra Leone: Gbenikoro | Sierra Leone | Mus minutoides | null | 2019-08-31 | null | PRJNA780418 | Seli virus strain M.minutoides-wt/SLE/2019/Gbenikoro-00094 segment L, complete sequence | CGGGGATCCTAGGCTTCATTGTTTGCGCATTTATAGGTGTCCTAATGGGCCAGAGTGCATCCAAGAGTGGGGACAACCCCCCGAGGCACATACGTCCCCCATCTGAGATGATTCCCCAAACCGTGGGGATGGACTCCCCCTGGTTTTGCAAATCATGTTGGCAAAGGGTGGACCCAATGGTCAGGTGCCACGATCACTACCTGTGTCGAACCTGTCTGAATCTACTGCTTTCCGTGAGTGAGCGCTGCCCACTCTGCAAACACCCACTTCCCAAAAAAGTCAGCCTGGCAGCCATCCCCTCAGCCCCACCCCCACCCCCC... | 33,671 |
OL364852.1 | Seli virus | Vucak,M., Nichols,J., Davison,A.J., Hughes,J., da Silva Filipe,A. | University of Glasgow, Centre for Virus Research | United Kingdom | 2022-01-18 | null | Seli virus | null | null | unknown | 7,171 | GenBank | null | Sierra Leone: Bafodia | Sierra Leone | Mus minutoides | null | 2019-09-07 | null | PRJNA780418 | Seli virus strain M.minutoides-wt/SLE/2019/Bafodia-00127 segment L, complete sequence | TTTGTGAGCATTCAAATGGGCCAAAACACCTCAAGAAGTGCGAACAGCCCTCCCAGACACCATTGCCCACCTTCTGAGATGATTCCGCAAGCTTCGGGCATAGACTCCCCCTGGTTCTGCAAGTCGTGCTGGCAAAGAGTTGACTCAATGGTCAGGTGTCATGACCACTATCTGTGTCGAACCTGCCTGAACCTGCTGCTCTCGGTCAGCGAACGCTGTCCGCTCTGCAAGTATCCACTCCCCACACGGGTCAGCCTGGGAACTGCCCCATCAGCGCCGCCCCCACCCCCCTACACGGAGCACTGAACCCAAGGCTCAGA... | 33,672 |
OL364854.1 | Seli virus | Vucak,M., Nichols,J., Davison,A.J., Hughes,J., da Silva Filipe,A. | University of Glasgow, Centre for Virus Research | United Kingdom | 2022-01-18 | null | Seli virus | null | null | unknown | 7,180 | GenBank | null | Sierra Leone: Badala | Sierra Leone | Mus minutoides | null | 2019-09-08 | null | PRJNA780418 | Seli virus strain M.minutoides-wt/SLE/2019/Badala-00207 segment L, complete sequence | CGCACCGGGGATCCTAGGCTTCATTGTTTGCGCATTTGTGGATATCCTGATGGGCCAAGGAGCATCCAAGAGCGGGGACAATCCCCCGAGGCACATTCGTCCCCCATCTGAGATGATTCCTCAAACCCTGGGAATGGACTCCCCTTGGTTCTGCAAATCATGTTGGCAAAGGGTGGACTCAATGGTCAAGTGCCACGATCACTACCTGTGTCGAACCTGCCTGAACCTACTGCTCTCTGTGAGTGAGCGCTGCCCACTCTGCAAACACCCACTCCCCACAAAAGTCAGCCTGGCGGCCATCCCCTCAGCCCCACCCCCAC... | 33,673 |
OL364856.1 | Seli virus | Vucak,M., Nichols,J., Davison,A.J., Hughes,J., da Silva Filipe,A. | University of Glasgow, Centre for Virus Research | United Kingdom | 2022-01-18 | null | Seli virus | null | null | unknown | 7,173 | GenBank | null | Sierra Leone: Bafodia | Sierra Leone | Mus minutoides | null | 2019-11-07 | null | PRJNA780418 | Seli virus strain M.minutoides-wt/SLE/2019/Bafodia-00367 segment L, complete sequence | CGCACCGGGGATCCTAGGCTTTACTGTTTGCGCATTTGTGAACATTCTAATGGGCCAAGGTGCATCCAAAAGCAGGGACAGTCCTCCAAGGCATCGACGTCCCCCGTCAGAGATGATCCCCCAAACACTGGGAATGGATTCCCCCTGGTTCTGCAAATCATGCTGGCAGAGGGTGGACTCAATGGTCAGGTGCCACGACCACTACCTGTGTCGGACCTGCCTAAATCTACTGCTCTCTGTGAGTGAGCGCTGCCCACTCTGCAAACACCCACTTCCCACAAGAGTCAGCCTGGCAGCCGTCCCCTCGGCCCCACCTCCAC... | 33,674 |
OL364858.1 | Seli virus | Vucak,M., Nichols,J., Davison,A.J., Hughes,J., da Silva Filipe,A. | University of Glasgow, Centre for Virus Research | United Kingdom | 2022-01-18 | null | Seli virus | null | null | unknown | 7,176 | GenBank | null | Sierra Leone: Badala | Sierra Leone | Mus minutoides | null | 2019-11-10 | null | PRJNA780418 | Seli virus strain M.minutoides-wt/SLE/2019/Badala-00414 segment L, complete sequence | CGGGGATCCTAGGCTTATTTACTTGCGCTTTTGTGATCAGTTTGATGGGCCAGGGTGCATCCAAGGGCGGGGGCAGTCCCTCCGGCCAACGTCGCCCTGCGTCTGAGATGATTCCTCAAGCATCAGGGATAGACTCCCCCTTGTTCTGCAAATCATGTTGGCAGAGGGTTGACTCAATGGTGCAGTGTCATGACCACTACCTGTGTCGGGCCTGTTTGAACTTGCTGCTCTCTGTGAGCGAGCGCTGCCCACTCTGCAAGTATCCACTTCCCACAAGAGTCAACCTGACGGCCATCCCCACAGCCCCACCCCCGCCCCCC... | 33,675 |
NC_003215.1 | Semliki Forest virus | Kaariainen,L., Takkinen,K., Keranen,S., Soderlund,H., Riedel,H., Lehrach,H., Garoff,H., Frischauf,A.M., Simons,K., Delius,H. | National Center for Biotechnology Information, NIH | USA | 1987-03-09 | null | Semliki Forest virus | Alphavirus | Togaviridae | ssRNA(+) | 11,442 | RefSeq | 5 | null | null | null | null | null | null | PRJNA485481 | Semliki forest virus, complete genome | ATGGCGGATGTGTGACATACACGACGCCAAAAGATTTTGTTCCAGCTCCTGCCACCTCGGCTACGCGAGAGATTAACCACCCACGATGGCCGCCAAAGTGCATGTTGATATTGAGGCTGACAGCCCATTCATCAAGTCTTTGCAGAAGGCATTTCCGTCGTTCGAGGTGGAGTCATTGCAGGTCACACCAAATGACCATGCAAATGCCAGAGCATTTTCGCACCTGGCTACCAAATTGATCGAGCAGGAGACTGACAAAGACACACTCATCTTGGATATCGGCAGTGCGCCTTCCAGGAGAATGATGTCTACGCACAAAT... | 9,089 |
MH426977.1 | Semliki Forest virus | Yadav,P.D. | National Institute of Virology, Maximum Containment Laboratory | India | 2020-06-30 | null | Semliki Forest virus | Alphavirus | Togaviridae | ssRNA(+) | 11,445 | GenBank | null | India | India | null | null | null | null | null | Semliki Forest virus strain NIV8913590, complete genome | ATGGCGGATGTGTGACATACACGACGCCAAAAGATTTTGTTCCAGCTCCTGCCACCTCCGCTACGCGAGAGATTAACCACCCACGATGGCCGCCAAAGTGCATGTTGATATTGAGGCTGACAGCCCATTCATCAAGTCTTTGCAGAAGGCATTTCCGTCGTTCGAGGTGGAGTCATTGCAGGTCACACCAAATGACCATGCAAATGCCAGAGCATTTTCGCACCTGGCTACCAAATTGATCGAGCAGGAGACTGACAAAGACACACTCATCTTGGATATCGGCAGTGCGCCTTCCAGGAGAATGATGTCTACGCACAAAT... | 48,746 |
MK280688.1 | Semliki Forest virus | Ternovoi,V.A., Mikriukova,T.P., Protopopova,E.V., Mezhevalova,A.S., Konovalova,S.N., Shvalov,A.N., Loktev,V.B., Agafonov,A.P., Maksyutov,R.A. | State Research Center of Virology and Biotehnology 'Vector', Department of Molecular Virology | Russia | 2019-06-04 | Tanzania53 | Semliki Forest virus | Alphavirus | Togaviridae | ssRNA(+) | 11,698 | GenBank | null | Tanzania | Tanzania | Homo sapiens | null | 1953 | null | null | Semliki Forest virus isolate Tanzania53, complete genome | ATGGCGGATGTGTGACATACACGACGCCAAAAGATTTTGTTCCAGCTCCTGCCACATCCGCCACGCGAGAGATTAACCACCCACGATGGCCGCCAAAGTGCATGTTGATATTGAGGCTGACAGCCCATTCATCAAGTCTTTGCAGAAGGCATTTCCGTCGTTCGAGGTGGAGTCATTGCAGGTCACACCAAATGACCATGCAAATGCCAGAGCATTTTCGCACCTGGCTACCAAATTGATCGAGCAGGAGACTGACAAAGACACACTCATCTTGGATATCGGCAGTGCGCCTTCCAGGAGAATGATGTCTACGCACAAAT... | 62,333 |
MH880789.1 | Semliki Forest virus | Hughes,H.R., Russell,B. | Centers for Disease Control and Prevention, Division of Vector-borne Diseases | USA | 2019-04-29 | Me tri 5-71 | Semliki Forest virus | Alphavirus | Togaviridae | ssRNA(+) | 11,820 | GenBank | null | Viet Nam | Viet Nam | Culex tritaeniorhynchus | null | 1971 | null | null | Semliki Forest virus isolate Me tri 5-71, complete genome | ATAGACACCACAGGACAGACCAAGCCCAAGCCAGGAGGCATCGTGTTAACATGCTTCCGAGGCTGGGTAAAGCAGCTGCAGTTGGACTACCGTGGACACGAAGTCATGACAGCAGCAGCATCATGGCGGATGTGTGACATACACGACGCCAAAAGATTTTGTTCCAGCTCCTGCCACCTCCGCTACGCGAGAGATTAACCACCCACGATGGCCGCCAAAGTGCATGTTGATATTGAGGCTGACAGCCCATTCATCAAGTCTTTGCAGAAGGCATTTCCGTCGTTCGAGGTGGAGTCATTGCAGGTCACACCAAATGACCA... | 63,013 |
KT009012.1 | Semliki Forest virus | Ferguson,M.C., Saul,S., Fragkoudis,R., Weisheit,S., Cox,J., Patabendige,A., Sherwood,K., Watson,M., Merits,A., Fazakerley,J.K. | The Pirbright Institute | United Kingdom | 2015-06-14 | null | Semliki Forest virus | Alphavirus | Togaviridae | ssRNA(+) | 11,445 | GenBank | 1 | null | null | null | null | null | null | null | Semliki Forest virus strain SFV6, complete genome | ATGGCGGATGTGTGACATACACGACGCCAAAAGATTTTGTTCCAGCTCCTGCCACCTCGGCTACGCGAGAGATTAACCACCCACGATGGCCGCCAAAGTGCATGTTGATATTGAGGCTGACAGCCCATTCATCAAGTCTTTGCAGAAGGCATTTCCGTCGTTCGAGGTGGAGTCATTGCAGGTCACACCAAATGACCATGCAAATGCCAGAGCATTTTCGCACCTGGCTACCAAATTGATCGAGCAGGAGACTGACAAAGACACACTCATCTTGGATATCGGCAGTGCGCCTTCCAGGAGAATGATGTCTACGCACAAAT... | 86,924 |
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