author int64 658 755k | date stringdate 2012-06-12 08:34:29 2024-07-22 14:51:21 | timezone int64 -46,800 43.2k | hash stringlengths 40 40 | message stringlengths 5 490 | mods listlengths 1 16 | language stringclasses 20
values | license stringclasses 3
values | repo stringlengths 5 68 | original_message stringlengths 12 491 |
|---|---|---|---|---|---|---|---|---|---|
49,706 | 13.08.2020 15:33:48 | -7,200 | 3e9752c5d0049589e5b7c872bb9d4876b018f96a | [MINOR] Fix startLocalFedWorker | [
{
"change_type": "MODIFY",
"old_path": "src/test/java/org/apache/sysds/test/AutomatedTestBase.java",
"new_path": "src/test/java/org/apache/sysds/test/AutomatedTestBase.java",
"diff": "@@ -1307,10 +1307,9 @@ public abstract class AutomatedTestBase {\ntry {\nt = new Thread(() -> {\ntry {\n- DMLScript.... | Java | Apache License 2.0 | apache/systemds | [MINOR] Fix startLocalFedWorker |
49,706 | 13.08.2020 15:50:57 | -7,200 | f3144e818a5d1c5956b8ec3e04e03966009d79d1 | [MINOR] Fix deprication warning Python | [
{
"change_type": "MODIFY",
"old_path": "src/main/python/systemds/utils/converters.py",
"new_path": "src/main/python/systemds/utils/converters.py",
"diff": "@@ -42,7 +42,7 @@ def numpy_to_matrix_block(jvm: JVMView, np_arr: np.array):\nelse:\narr = np_arr.ravel().astype(np.float64)\nvalue_type = jvm.o... | Java | Apache License 2.0 | apache/systemds | [MINOR] Fix deprication warning Python |
49,746 | 13.08.2020 18:58:31 | -7,200 | 2c4bf8816a4b87d0a91dd02ff390bae87cef4b3e | New builtin for obtaining frame column names
New builtin colnames(X) for obtaining a single-row frame holding the
column names by position.
Closes | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/common/Builtins.java",
"new_path": "src/main/java/org/apache/sysds/common/Builtins.java",
"diff": "@@ -64,6 +64,7 @@ public enum Builtins {\nCOLMAX(\"colMaxs\", false),\nCOLMEAN(\"colMeans\", false),\nCOLMIN(\"colMins\", false),\... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2617] New builtin for obtaining frame column names
New builtin colnames(X) for obtaining a single-row frame holding the
column names by position.
Closes #1020. |
49,738 | 15.08.2020 13:20:08 | -7,200 | 41685600ba8370646301ef0997f170c300101cea | New pca builtin function (principal component analysis) | [
{
"change_type": "ADD",
"old_path": null,
"new_path": "scripts/builtin/pca.dml",
"diff": "+#-------------------------------------------------------------\n+#\n+# Licensed to the Apache Software Foundation (ASF) under one\n+# or more contributor license agreements. See the NOTICE file\n+# distributed... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2619] New pca builtin function (principal component analysis) |
49,738 | 15.08.2020 14:39:45 | -7,200 | a3e3ea949c6af02914356c430756477b948965ce | Federated tsmm operations (e.g., PCA, lmDS, cor)
* Federated tsmm: support for federated tsmm left over row-partioned
federated matrices.
* Performance: aggAdd (e.g., in ba+*, uack+, and tsmm) via nary instead
of binary operations. | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/runtime/controlprogram/federated/FederationUtils.java",
"new_path": "src/main/java/org/apache/sysds/runtime/controlprogram/federated/FederationUtils.java",
"diff": "@@ -29,13 +29,13 @@ import org.apache.sysds.runtime.DMLRuntimeEx... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2620] Federated tsmm operations (e.g., PCA, lmDS, cor)
* Federated tsmm: support for federated tsmm left over row-partioned
federated matrices.
* Performance: aggAdd (e.g., in ba+*, uack+, and tsmm) via nary instead
of binary operations. |
49,722 | 15.08.2020 14:56:44 | -7,200 | fc0e21059e06d1928020657b3882e986363f7fda | DBScan and dist builtin
Implemented dist for euclidean distance matrix.
Implemented DBSCAN
Added R dbscan package
Fixed error for similar points and all noise points
Fixed DBSCAN
Updated DBSCAN and added documentation
Added tests for dist and DBScan.
Closes | [
{
"change_type": "MODIFY",
"old_path": "docs/site/builtins-reference.md",
"new_path": "docs/site/builtins-reference.md",
"diff": "@@ -29,7 +29,9 @@ limitations under the License.\n* [DML-Bodied Built-In functions](#dml-bodied-built-in-functions)\n* [`confusionMatrix`-Function](#confusionmatrix-funct... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2621] DBScan and dist builtin
- Implemented dist for euclidean distance matrix.
- Implemented DBSCAN
- Added R dbscan package
- Fixed error for similar points and all noise points
- Fixed DBSCAN
- Updated DBSCAN and added documentation
- Added tests for dist and DBScan.
Closes #1003. |
49,706 | 15.08.2020 15:08:10 | -7,200 | 6029c07a3ddce313e27d914a9c7dffb53b48b4cc | [MINOR] Federated ops count in stats
Closes | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/runtime/controlprogram/federated/FederatedData.java",
"new_path": "src/main/java/org/apache/sysds/runtime/controlprogram/federated/FederatedData.java",
"diff": "@@ -36,6 +36,7 @@ import org.apache.sysds.common.Types;\nimport org.... | Java | Apache License 2.0 | apache/systemds | [MINOR] Federated ops count in stats
Closes #1022. |
49,738 | 15.08.2020 16:01:47 | -7,200 | 351a2e470a94d44409f6c9c69e77ab55721677fa | [MINOR] Various cleanups (replace correctness, imports, warnings) | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/hops/codegen/SpoofCompiler.java",
"new_path": "src/main/java/org/apache/sysds/hops/codegen/SpoofCompiler.java",
"diff": "@@ -30,8 +30,6 @@ import java.util.Map.Entry;\nimport org.apache.commons.logging.Log;\nimport org.apache.com... | Java | Apache License 2.0 | apache/systemds | [MINOR] Various cleanups (replace correctness, imports, warnings) |
49,738 | 16.08.2020 17:30:03 | -7,200 | 854b4e94f0e8f4c8b8e0f2867558cb90e4e8e552 | [SYSTEMDS-2549,2624] Fix federated binary matrix-vector, var cleanup
This patch fixes two correctness issues related to (1) cleanup of
federated matrices, and (2) federated binary matrix-row vector
operators. Furthermore, this also includes a new federated Kmeans test
and some minor fixes for row aggregates, and improvements of federated
matrix multiplications. | [
{
"change_type": "MODIFY",
"old_path": "scripts/builtin/kmeans.dml",
"new_path": "scripts/builtin/kmeans.dml",
"diff": "@@ -160,7 +160,7 @@ m_kmeans = function(Matrix[Double] X, Integer k = 10, Integer runs = 10, Integer\nC_old = C; C = C_new;\n}\n- if(is_verbose == TRUE)\n+ if(is_verbose)\nprint (\... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2549,2624] Fix federated binary matrix-vector, var cleanup
This patch fixes two correctness issues related to (1) cleanup of
federated matrices, and (2) federated binary matrix-row vector
operators. Furthermore, this also includes a new federated Kmeans test
and some minor fixes for row aggregates, and improvements of federated
matrix multiplications. |
49,738 | 16.08.2020 18:32:52 | -7,200 | 0f54db9c79cd768f76c04007bd9fc5069fed5060 | [MINOR] Fix case-sensitive dml script name (federated kmeans)
While win allows for case-insensitive filenames, this is not true on
linux and macos. | [
{
"change_type": "MODIFY",
"old_path": "src/test/java/org/apache/sysds/test/functions/federated/FederatedKmeansTest.java",
"new_path": "src/test/java/org/apache/sysds/test/functions/federated/FederatedKmeansTest.java",
"diff": "@@ -40,7 +40,7 @@ import java.util.Collection;\npublic class FederatedKm... | Java | Apache License 2.0 | apache/systemds | [MINOR] Fix case-sensitive dml script name (federated kmeans)
While win allows for case-insensitive filenames, this is not true on
linux and macos. |
49,706 | 17.08.2020 13:30:55 | -7,200 | cacee1131458c97927a23242e9760c038c0e5ddb | Parallel detect schema
Changes the implementation of detect schema to run in
parallel across all columns.
Closes | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/runtime/instructions/cp/BinaryFrameFrameCPInstruction.java",
"new_path": "src/main/java/org/apache/sysds/runtime/instructions/cp/BinaryFrameFrameCPInstruction.java",
"diff": "@@ -39,7 +39,7 @@ public class BinaryFrameFrameCPInstr... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2616] Parallel detect schema
Changes the implementation of detect schema to run in
parallel across all columns.
Closes #1012 |
49,698 | 17.08.2020 18:25:54 | -19,080 | 961d4dc80a8a6cde7210fb2bbd7d1c091a0092ff | [MINOR] Remove println in NNTest | [
{
"change_type": "MODIFY",
"old_path": "src/test/java/org/apache/sysds/test/applications/NNTest.java",
"new_path": "src/test/java/org/apache/sysds/test/applications/NNTest.java",
"diff": "@@ -38,7 +38,6 @@ public class NNTest extends MLContextTestBase {\npublic void testNNLibrary() {\nScript script ... | Java | Apache License 2.0 | apache/systemds | [MINOR] Remove println in NNTest |
49,738 | 20.08.2020 01:23:49 | -7,200 | bcd4ead93b7927aed647024ed6e91ce95e72ffaf | [MINOR] Fix federated component tests and frame csv reader robustness | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/runtime/io/FrameReaderTextCSV.java",
"new_path": "src/main/java/org/apache/sysds/runtime/io/FrameReaderTextCSV.java",
"diff": "@@ -48,10 +48,11 @@ import org.apache.sysds.runtime.util.UtilFunctions;\n*\n*/\npublic class FrameRead... | Java | Apache License 2.0 | apache/systemds | [MINOR] Fix federated component tests and frame csv reader robustness |
49,698 | 20.08.2020 13:21:54 | -19,080 | 2f5d3fb3ac024bf8581cfc0369eddf56e8235a27 | [WIP][DOC] DML to R translation guide
* some common differences between R and DML
* The examples should be runnable to make the
guide more interesting. | [
{
"change_type": "ADD",
"old_path": null,
"new_path": "dev/docs/dml-vs-r-guide.md",
"diff": "+<!--\n+{% comment %}\n+Licensed to the Apache Software Foundation (ASF) under one or more\n+contributor license agreements. See the NOTICE file distributed with\n+this work for additional information regard... | Java | Apache License 2.0 | apache/systemds | [WIP][DOC] DML to R translation guide (#1007)
* some common differences between R and DML
* The examples should be runnable to make the
guide more interesting. |
49,706 | 20.08.2020 18:09:14 | -7,200 | 260f44001844a7b231e52eb36f064f4d9808058e | [MINOR] Debugging Update for FederatedWorkerHandler | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/runtime/controlprogram/federated/FederatedWorkerHandler.java",
"new_path": "src/main/java/org/apache/sysds/runtime/controlprogram/federated/FederatedWorkerHandler.java",
"diff": "@@ -72,7 +72,9 @@ public class FederatedWorkerHand... | Java | Apache License 2.0 | apache/systemds | [MINOR] Debugging Update for FederatedWorkerHandler |
49,706 | 20.08.2020 18:31:52 | -7,200 | abacd66ecd69ef8f8daa83e555e26f26b33c8e03 | [MINOR] New error object written in case failing Channel | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/runtime/controlprogram/federated/FederatedWorkerHandler.java",
"new_path": "src/main/java/org/apache/sysds/runtime/controlprogram/federated/FederatedWorkerHandler.java",
"diff": "@@ -293,11 +293,20 @@ public class FederatedWorker... | Java | Apache License 2.0 | apache/systemds | [MINOR] New error object written in case failing Channel |
49,706 | 20.08.2020 19:48:46 | -7,200 | c9a02a2e9fa3ec50a2a8c3611d62a2a334b5bab3 | [MINOR] Negative test of federatedError | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/runtime/controlprogram/federated/FederatedResponse.java",
"new_path": "src/main/java/org/apache/sysds/runtime/controlprogram/federated/FederatedResponse.java",
"diff": "@@ -91,6 +91,10 @@ public class FederatedResponse implements... | Java | Apache License 2.0 | apache/systemds | [MINOR] Negative test of federatedError |
49,746 | 20.08.2020 22:53:56 | -7,200 | 7eccbfeb047dd029f8e110e65d208543c3d60ee5 | [SYSTEMDS-2554,2558,2561] Federated transform decode (recoding)
Closes | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/runtime/controlprogram/caching/CacheableData.java",
"new_path": "src/main/java/org/apache/sysds/runtime/controlprogram/caching/CacheableData.java",
"diff": "@@ -768,7 +768,7 @@ public abstract class CacheableData<T extends CacheB... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2554,2558,2561] Federated transform decode (recoding)
Closes #1027. |
49,706 | 21.08.2020 17:11:18 | -7,200 | cf5dc8d3b0e0b87b282413d93c4de2e973f887a8 | [MINOR] Fix federated test
This commit fixes the test added in #19b4929b3b23e01c3d62e09875891e4f6cfb6e5b
fix enabling execution of sum square federated operations.
fix test name in federated LogRegTest.
fix asserted federated operations in LogRegTest | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/runtime/controlprogram/federated/FederationUtils.java",
"new_path": "src/main/java/org/apache/sysds/runtime/controlprogram/federated/FederationUtils.java",
"diff": "@@ -136,7 +136,7 @@ public class FederationUtils {\n}\npublic st... | Java | Apache License 2.0 | apache/systemds | [MINOR] Fix federated test
This commit fixes the test added in #19b4929b3b23e01c3d62e09875891e4f6cfb6e5b
- fix enabling execution of sum square federated operations.
- fix test name in federated LogRegTest.
- fix asserted federated operations in LogRegTest |
49,722 | 24.08.2020 10:59:37 | -7,200 | 3f05aa9f59f663df105307da3483d0de8f046c08 | Built-in function for univariate statistics
Added univar and bivar builtins, federated tests, fixed fed matrix max
Closes | [
{
"change_type": "ADD",
"old_path": null,
"new_path": "scripts/builtin/univar.dml",
"diff": "+#-------------------------------------------------------------\n+#\n+# Licensed to the Apache Software Foundation (ASF) under one\n+# or more contributor license agreements. See the NOTICE file\n+# distribu... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2636] Built-in function for univariate statistics
Added univar and bivar builtins, federated tests, fixed fed matrix max
Closes #1035. |
49,684 | 17.08.2020 18:20:06 | -7,200 | c0643923206616b7503d8b74884b3e8d40ccfae3 | Leaky relu NN layer, incl grad check and 2NN example
Closes | [
{
"change_type": "RENAME",
"old_path": "scripts/nn/examples/Example-MNIST_2NN_ReLu_Softmax.dml",
"new_path": "scripts/nn/examples/Example-MNIST_2NN_Leaky_ReLu_Softmax.dml",
"diff": "#-------------------------------------------------------------\n/*\n+ * This Example trains a feed forward neural netw... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2637] Leaky relu NN layer, incl grad check and 2NN example
Closes #1026. |
49,706 | 24.08.2020 13:43:48 | -7,200 | 8b0dff6a03c92e680c6fda3d551e599eed2c2f8e | [MINOR] Add arguments to worker in bin/systemds | [
{
"change_type": "MODIFY",
"old_path": "bin/systemds",
"new_path": "bin/systemds",
"diff": "@@ -156,6 +156,7 @@ elif echo \"$1\" | grep -q \"WORKER\"; then\necho \"error: Port is not a number\"\nprintUsageExit\nfi\n+ shift\nelse\n# handle optional '-f' before DML file (for consistency)\nif echo \"$1... | Java | Apache License 2.0 | apache/systemds | [MINOR] Add arguments to worker in bin/systemds |
49,706 | 24.08.2020 14:36:41 | -7,200 | ce3c49e65a04e2dc5d807eafe70cc277c4cf657d | [MINOR] DML config enabled for Federated Worker | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/api/DMLScript.java",
"new_path": "src/main/java/org/apache/sysds/api/DMLScript.java",
"diff": "@@ -256,6 +256,7 @@ public class DMLScript\n}\nif (dmlOptions.fedWorker) {\n+ loadConfiguration(fnameOptConfig);\nnew FederatedWorker(... | Java | Apache License 2.0 | apache/systemds | [MINOR] DML config enabled for Federated Worker |
49,706 | 24.08.2020 16:59:26 | -7,200 | 7d2e6bb7e6005637e9afc4c02d3fda5ae0bf34ec | [MINOR] Debug print reading
This commit adds a debug print in reading from file to detect if the
reading is done in parallel.
Also in this commit the delay for worker startup in federated tests is
increased to 2 sec from 1 sec. | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/runtime/io/MatrixReaderFactory.java",
"new_path": "src/main/java/org/apache/sysds/runtime/io/MatrixReaderFactory.java",
"diff": "package org.apache.sysds.runtime.io;\n-import org.apache.sysds.conf.ConfigurationManager;\n+import o... | Java | Apache License 2.0 | apache/systemds | [MINOR] Debug print reading
This commit adds a debug print in reading from file to detect if the
reading is done in parallel.
Also in this commit the delay for worker startup in federated tests is
increased to 2 sec from 1 sec. |
49,684 | 25.08.2020 09:26:08 | -7,200 | 46bc56e259207d70ddb3f9252bf58c9172a9d05c | [MINOR] Bug Fix in /bin/systemds
This commit fixes a :bug: in /bin/systemds that made the command for
executing java not print correctly.
closes | [
{
"change_type": "MODIFY",
"old_path": "bin/systemds",
"new_path": "bin/systemds",
"diff": "@@ -283,10 +283,6 @@ if [ $WORKER == 1 ]; then\nprint_out \"#\"\nprint_out \"# starting Fedederated worker on port $PORT\"\nprint_out \"########################################################################... | Java | Apache License 2.0 | apache/systemds | [MINOR] Bug Fix in /bin/systemds
This commit fixes a :bug: in /bin/systemds that made the command for
executing java not print correctly.
closes #1038 |
49,706 | 25.08.2020 20:58:56 | -7,200 | 60d41a8a774f868812b8ca7cae5c987afc789b1b | [MINOR] Fix read non zeros from mdt file
In federated workers, the IO time was off, compared to local execution.
This was due to a missing reading of the NonZeros.
This commit adds this 1 LINE! | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/runtime/controlprogram/federated/FederatedWorkerHandler.java",
"new_path": "src/main/java/org/apache/sysds/runtime/controlprogram/federated/FederatedWorkerHandler.java",
"diff": "@@ -195,6 +195,7 @@ public class FederatedWorkerHa... | Java | Apache License 2.0 | apache/systemds | [MINOR] Fix read non zeros from mdt file
In federated workers, the IO time was off, compared to local execution.
This was due to a missing reading of the NonZeros.
This commit adds this 1 LINE! |
49,706 | 26.08.2020 16:43:02 | -7,200 | 9c0d0b731be06f3112661a9c04740b91a3870e7e | [MINOR] Check if NNZ is in mdt before parsing
This commit change the behavior of a federated worker if the
metadata file does not contain the number of non zeros.
It makes it default to parse into a dense representation when the input
is small, and sparse representation if large. | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/runtime/controlprogram/federated/FederatedWorkerHandler.java",
"new_path": "src/main/java/org/apache/sysds/runtime/controlprogram/federated/FederatedWorkerHandler.java",
"diff": "@@ -195,7 +195,18 @@ public class FederatedWorkerH... | Java | Apache License 2.0 | apache/systemds | [MINOR] Check if NNZ is in mdt before parsing
This commit change the behavior of a federated worker if the
metadata file does not contain the number of non zeros.
It makes it default to parse into a dense representation when the input
is small, and sparse representation if large. |
49,738 | 27.08.2020 21:55:33 | -7,200 | 5febadc75be76c4365f20e01364610f283881c1e | [MINOR] Enable multi-threaded I/O and operations for new Python API | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/api/PythonDMLScript.java",
"new_path": "src/main/java/org/apache/sysds/api/PythonDMLScript.java",
"diff": "@@ -22,6 +22,7 @@ package org.apache.sysds.api;\nimport org.apache.commons.logging.Log;\nimport org.apache.commons.logging... | Java | Apache License 2.0 | apache/systemds | [MINOR] Enable multi-threaded I/O and operations for new Python API |
49,706 | 28.08.2020 12:17:10 | -7,200 | 39e64c1996650af24963daea08289255cb8cea31 | Python API K-Means algorithm
This commit introduce the K Means algorithm to the python API.
Currently the python interface only allows to return one value not a
list, therefore only the clusters are returned from the call to kmeans. | [
{
"change_type": "MODIFY",
"old_path": "src/main/python/systemds/context/systemds_context.py",
"new_path": "src/main/python/systemds/context/systemds_context.py",
"diff": "@@ -106,22 +106,24 @@ class SystemDSContext(object):\nself.java_gateway = JavaGateway(\ngateway_parameters=gateway_parameters, j... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2645] Python API K-Means algorithm
This commit introduce the K Means algorithm to the python API.
Currently the python interface only allows to return one value not a
list, therefore only the clusters are returned from the call to kmeans. |
49,706 | 28.08.2020 13:37:54 | -7,200 | 2f60b71dc43a2ec76ec99af2e2507cddabdc5fe8 | [MINOR] fix federated transform test | [
{
"change_type": "MODIFY",
"old_path": "src/test/java/org/apache/sysds/test/AutomatedTestBase.java",
"new_path": "src/test/java/org/apache/sysds/test/AutomatedTestBase.java",
"diff": "@@ -101,7 +101,7 @@ public abstract class AutomatedTestBase {\npublic static final boolean TEST_GPU = false;\npublic... | Java | Apache License 2.0 | apache/systemds | [MINOR] fix federated transform test |
49,706 | 28.08.2020 16:37:51 | -7,200 | c0b46b917971567a4bed984b744b46c1a2cf7f87 | Python API MultiLogReg Algorithm | [
{
"change_type": "MODIFY",
"old_path": "src/main/python/systemds/operator/algorithm.py",
"new_path": "src/main/python/systemds/operator/algorithm.py",
"diff": "@@ -85,7 +85,8 @@ def kmeans(x: DAGNode, **kwargs: Dict[str, VALID_INPUT_TYPES]) -> OperationNode:\n.format(s=x._np_array.shape))\nif 'k' in... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2647] Python API MultiLogReg Algorithm |
49,706 | 29.08.2020 14:21:32 | -7,200 | f60b790e3571f401be2626f222aeec4a5a9fe53d | Multi return for algorithms in python
This commit change the python interface to allow multi return builtin
algorithms. Such that when we have many returns, it will parse out each
of these into a list. | [
{
"change_type": "MODIFY",
"old_path": "src/main/python/systemds/operator/algorithm.py",
"new_path": "src/main/python/systemds/operator/algorithm.py",
"diff": "from typing import Dict\nfrom systemds.operator import OperationNode\n-from systemds.script_building.dag import DAGNode\n+from systemds.scri... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2648] Multi return for algorithms in python
This commit change the python interface to allow multi return builtin
algorithms. Such that when we have many returns, it will parse out each
of these into a list. |
49,720 | 01.09.2020 12:23:38 | -7,200 | b3ef333a164a279abeccad50ca0fab268a308a3e | [MINOR] cleanup map built-in | [
{
"change_type": "MODIFY",
"old_path": "docs/site/dml-language-reference.md",
"new_path": "docs/site/dml-language-reference.md",
"diff": "@@ -2026,13 +2026,13 @@ The following example uses <code>transformapply()</code> with the input matrix a\n### Processing Frames\n-Built-In functions <code>dml_map... | Java | Apache License 2.0 | apache/systemds | [MINOR] cleanup map built-in |
49,720 | 01.09.2020 22:47:36 | -7,200 | 36eaaeb961130471c7d8f19456a7848312ff25b5 | imputeByFD now accepts the matrix input
The initial version of imputeByFD accepts the frame input then internally recodes the
frame and performs imputations. Now, the method accepts the matrix input
(recoded matrix for non-numeric data) and directly perform imputations on matrix values. | [
{
"change_type": "MODIFY",
"old_path": "scripts/builtin/imputeByFD.dml",
"new_path": "scripts/builtin/imputeByFD.dml",
"diff": "# ---------------------------------------------------------------------------------------------\n# NAME TYPE DEFAULT MEANING\n# --------------------------------------------... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2659] imputeByFD now accepts the matrix input
The initial version of imputeByFD accepts the frame input then internally recodes the
frame and performs imputations. Now, the method accepts the matrix input
(recoded matrix for non-numeric data) and directly perform imputations on matrix values. |
49,720 | 02.09.2020 14:20:50 | -7,200 | f4cc41c8c90dc9787573af36db69cbd3b66a6bd2 | Synthetic Minority Over-sampling Technique (SMOTE)
Technique for handling unbalance classes by oversampling the minority class
Date: Wed Sep 2 14:16:32 2020 +0200
Closes | [
{
"change_type": "ADD",
"old_path": null,
"new_path": "scripts/builtin/smote.dml",
"diff": "+#-------------------------------------------------------------\n+#\n+# Licensed to the Apache Software Foundation (ASF) under one\n+# or more contributor license agreements. See the NOTICE file\n+# distribut... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2658] Synthetic Minority Over-sampling Technique (SMOTE)
Technique for handling unbalance classes by oversampling the minority class
Date: Wed Sep 2 14:16:32 2020 +0200
Closes #988 |
49,706 | 02.09.2020 14:38:58 | -7,200 | 0bdf9ac52e26bdb73d4a93e8294158bbe5ca070b | [DOCS] Fix typo in pca algortihm python | [
{
"change_type": "MODIFY",
"old_path": "docs/api/python/api/script_building/script.html",
"new_path": "docs/api/python/api/script_building/script.html",
"diff": "<dd><p>DMLScript is the class used to describe our intended behavior in DML. This script can be then executed to\nget the results.</p>\n<p... | Java | Apache License 2.0 | apache/systemds | [DOCS] Fix typo in pca algortihm python |
49,720 | 02.09.2020 16:26:16 | -7,200 | f2940990d970ad3703d6ac3a45a7bb454fc9c5ba | [MINOR][DOC] Updates in built-in docs
This commit updates the doc file for new builtin "smote "
The commit also introduces,
1. A sanity check in mice.dml
2. minor fix in calculation of iterations in smote.dml
3. verbose variable in imputeByFD.dml | [
{
"change_type": "MODIFY",
"old_path": "docs/site/builtins-reference.md",
"new_path": "docs/site/builtins-reference.md",
"diff": "@@ -50,6 +50,7 @@ limitations under the License.\n* [`pnmf`-Function](#pnmf-function)\n* [`scale`-Function](#scale-function)\n* [`sigmoid`-Function](#sigmoid-function)\n+... | Java | Apache License 2.0 | apache/systemds | [MINOR][DOC] Updates in built-in docs
This commit updates the doc file for new builtin "smote "
The commit also introduces,
1. A sanity check in mice.dml
2. minor fix in calculation of iterations in smote.dml
3. verbose variable in imputeByFD.dml |
49,738 | 02.09.2020 20:26:04 | -7,200 | 4a604b66e6444902ef903866c6bbb9f15c3d666d | Fix parfor deep copy handling on eval, missing tests
This patch fixes the currently failing test on pipeline enumeration and
adds the two new packages 'pipelines', and 'privacy' to the github
workflows. | [
{
"change_type": "MODIFY",
"old_path": ".github/workflows/functionsTests.yml",
"new_path": ".github/workflows/functionsTests.yml",
"diff": "@@ -68,6 +68,8 @@ jobs:\nnary,\nparamserv,\nparfor,\n+ pipelines,\n+ privacy,\nquaternary,\nrecompile,\nreorg,\n"
},
{
"change_type": "MODIFY",
"old... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2655] Fix parfor deep copy handling on eval, missing tests
This patch fixes the currently failing test on pipeline enumeration and
adds the two new packages 'pipelines', and 'privacy' to the github
workflows. |
49,738 | 02.09.2020 22:36:09 | -7,200 | a0b195eebe8d703875b9e2cb6016041ef959ed19 | Fix robustness spark transform encode (empty partitions)
This patch fixes an edge cases of spark transform encode (specifically
recode and dummy code) when spark partitions are completely empty. | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/runtime/instructions/spark/MultiReturnParameterizedBuiltinSPInstruction.java",
"new_path": "src/main/java/org/apache/sysds/runtime/instructions/spark/MultiReturnParameterizedBuiltinSPInstruction.java",
"diff": "@@ -254,9 +254,11 ... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2656] Fix robustness spark transform encode (empty partitions)
This patch fixes an edge cases of spark transform encode (specifically
recode and dummy code) when spark partitions are completely empty. |
49,720 | 03.09.2020 21:51:40 | -7,200 | f7cd343af4fcc4b0e1d9e490c409e8cbdf0d0058 | [MINOR] Test docker file update
changes to resolve issues with R packages. | [
{
"change_type": "MODIFY",
"old_path": "docker/testsysds.Dockerfile",
"new_path": "docker/testsysds.Dockerfile",
"diff": "@@ -39,7 +39,10 @@ RUN wget http://archive.apache.org/dist/maven/maven-3/$MAVEN_VERSION/binaries/ap\n# Install Extras\nRUN apt-get update -qq && \\\napt-get upgrade -y && \\\n- a... | Java | Apache License 2.0 | apache/systemds | [MINOR] Test docker file update
changes to resolve issues with R packages. |
49,738 | 03.09.2020 22:12:30 | -7,200 | 92884d6b8f11451d4ffc018720ee0a24e8296fb3 | New slice finding algorithm (dml implementation)
This patch adds the new slice finding implementation via linear algebra
(SliceLine). Even without full pruning, this implementation performs
exact slice finding for the Salaries dataset in 2.6s (incl compilation
and startup). | [
{
"change_type": "ADD",
"old_path": null,
"new_path": "scripts/staging/slicing/slicing.dml",
"diff": "+#-------------------------------------------------------------\n+#\n+# Licensed to the Apache Software Foundation (ASF) under one\n+# or more contributor license agreements. See the NOTICE file\n+#... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2641] New slice finding algorithm (dml implementation)
This patch adds the new slice finding implementation via linear algebra
(SliceLine). Even without full pruning, this implementation performs
exact slice finding for the Salaries dataset in 2.6s (incl compilation
and startup). |
49,689 | 31.08.2020 14:12:19 | -7,200 | 3b4b01937b98f7095a9460684fafdb99a9ad5df2 | [MINOR] Update release scripts | [
{
"change_type": "ADD",
"old_path": null,
"new_path": "dev/release/old-release-build.sh",
"diff": "+#!/usr/bin/env bash\n+#-------------------------------------------------------------\n+#\n+# Modifications Copyright 2019 Graz University of Technology\n+#\n+# Licensed to the Apache Software Foundati... | Java | Apache License 2.0 | apache/systemds | [MINOR] Update release scripts |
49,689 | 04.09.2020 15:40:03 | -7,200 | 3013558ba2e03865a63f0fa05831fea03e4ca0bf | [MINOR] Fix bugs in the release scripts | [
{
"change_type": "MODIFY",
"old_path": "dev/release/old-release-build.sh",
"new_path": "dev/release/old-release-build.sh",
"diff": "#!/usr/bin/env bash\n#-------------------------------------------------------------\n#\n-# Modifications Copyright 2019 Graz University of Technology\n-#\n# Licensed to... | Java | Apache License 2.0 | apache/systemds | [MINOR] Fix bugs in the release scripts |
49,689 | 05.09.2020 22:37:22 | -7,200 | 5596fcf0d77946cf11ff34085e8879552dd852be | Non-recursive construction of HOPs from Lineage
This patch implements a non-recursive version of HOP dag construction
from lineage dag, which fixes the stack overflow while re-computing
from lineage. | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/runtime/lineage/LineageRecomputeUtils.java",
"new_path": "src/main/java/org/apache/sysds/runtime/lineage/LineageRecomputeUtils.java",
"diff": "@@ -25,8 +25,10 @@ import java.util.HashMap;\nimport java.util.LinkedHashMap;\nimport ... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2650] Non-recursive construction of HOPs from Lineage
This patch implements a non-recursive version of HOP dag construction
from lineage dag, which fixes the stack overflow while re-computing
from lineage. |
49,706 | 05.08.2020 21:55:00 | -7,200 | e6119429b724ab4ba3976544e8b76fc86f0cd9fc | Compressed Binary Cell Operations
Basic Compressed Binary Cell Operation.
Will fail in most cases, because the implementation is not finished. | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/hops/rewrite/ProgramRewriter.java",
"new_path": "src/main/java/org/apache/sysds/hops/rewrite/ProgramRewriter.java",
"diff": "@@ -52,7 +52,6 @@ public class ProgramRewriter\nprivate ArrayList<HopRewriteRule> _dagRuleSet = null;\np... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2615] Compressed Binary Cell Operations
Basic Compressed Binary Cell Operation.
Will fail in most cases, because the implementation is not finished. |
49,720 | 06.09.2020 17:29:51 | -7,200 | f4e2412bf15abdda41bf0d0099cc1d0a2c40c1f1 | New builtin for forward and backward NA filling
Closes | [
{
"change_type": "ADD",
"old_path": null,
"new_path": "scripts/builtin/na_locf.dml",
"diff": "+#-------------------------------------------------------------\n+#\n+# Licensed to the Apache Software Foundation (ASF) under one\n+# or more contributor license agreements. See the NOTICE file\n+# distrib... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2635] New builtin for forward and backward NA filling
Closes #1036. |
49,689 | 07.09.2020 16:48:33 | -7,200 | 8a85d529d3c6670dc04915e0e672aae14c343307 | Fix capturaing inputs to a loop body | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/parser/ForStatementBlock.java",
"new_path": "src/main/java/org/apache/sysds/parser/ForStatementBlock.java",
"diff": "@@ -278,6 +278,17 @@ public class ForStatementBlock extends StatementBlock\npublic Lop getToLops() { return _toL... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2650] Fix capturaing inputs to a loop body |
49,738 | 10.09.2020 13:40:05 | -7,200 | 6308847f9a6dd3c74edd5a3ef9b62fb2ad2d4511 | [MINOR] Fix compressed OLE matrix-vector operations
This patch partially fixes an issue with cache-conscious OLE
matrix-vector operations. However, it only fixes the issues for
single-threaded operations, while multi-threaded ops still run into
index out-of-bounds issues on covtype. | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/runtime/compress/CompressedMatrixBlock.java",
"new_path": "src/main/java/org/apache/sysds/runtime/compress/CompressedMatrixBlock.java",
"diff": "@@ -982,9 +982,12 @@ public class CompressedMatrixBlock extends AbstractCompressedMa... | Java | Apache License 2.0 | apache/systemds | [MINOR] Fix compressed OLE matrix-vector operations
This patch partially fixes an issue with cache-conscious OLE
matrix-vector operations. However, it only fixes the issues for
single-threaded operations, while multi-threaded ops still run into
index out-of-bounds issues on covtype. |
49,700 | 13.09.2020 14:39:09 | -7,200 | 2e6883a6e7588b31054c25c61177fed3b8ebf0de | Simplified privacy handling of federated UDF inputs
Closes | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/runtime/controlprogram/federated/FederatedWorkerHandler.java",
"new_path": "src/main/java/org/apache/sysds/runtime/controlprogram/federated/FederatedWorkerHandler.java",
"diff": "@@ -302,6 +302,7 @@ public class FederatedWorkerHa... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2618] Simplified privacy handling of federated UDF inputs
Closes #1053. |
49,720 | 14.09.2020 17:16:47 | -7,200 | 9bf5194a6cf186bc35304bb03780c7a439922b5b | [MINOR][DOC] Formatting Fix in documentation | [
{
"change_type": "MODIFY",
"old_path": "docs/site/dml-language-reference.md",
"new_path": "docs/site/dml-language-reference.md",
"diff": "@@ -2033,6 +2033,7 @@ The built-in function <code>map()</code> provides support for the lambda express\nFunction | Description | Parameters | Example\n-------- | ... | Java | Apache License 2.0 | apache/systemds | [MINOR][DOC] Formatting Fix in documentation |
49,720 | 14.09.2020 18:50:49 | -7,200 | ea37c48ec001a65e83d209b3fd05ed3d257f655d | [MINOR][DOC] Formatting fix | [
{
"change_type": "MODIFY",
"old_path": "docs/site/dml-language-reference.md",
"new_path": "docs/site/dml-language-reference.md",
"diff": "@@ -2032,11 +2032,11 @@ The built-in function <code>map()</code> provides support for the lambda express\nFunction | Description | Parameters | Example\n-------- ... | Java | Apache License 2.0 | apache/systemds | [MINOR][DOC] Formatting fix |
49,693 | 14.09.2020 21:49:05 | -7,200 | d181ea511a5e1735c844792c116ee9ecf19b2ff0 | [MINOR] Fix parsing gpu binary aggregate instruction
An additional integer for thread count was introduced in the string representation of bin_agg instructions which made the gpu version fail. | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/runtime/instructions/gpu/AggregateBinaryGPUInstruction.java",
"new_path": "src/main/java/org/apache/sysds/runtime/instructions/gpu/AggregateBinaryGPUInstruction.java",
"diff": "@@ -57,12 +57,12 @@ public class AggregateBinaryGPUI... | Java | Apache License 2.0 | apache/systemds | [MINOR] Fix parsing gpu binary aggregate instruction
An additional integer for thread count was introduced in the string representation of bin_agg instructions which made the gpu version fail. |
49,738 | 15.09.2020 21:13:13 | -7,200 | 95128102e5269aaa5754283b9d2760b78a8e746c | Improved slicefinder builtin (hybrid tp, pruning)
New hybrid task-parallel execution w/ exposed block size (2x
performance improvement for many slices)
New pruning before pair enumeration for zero error
Slice extraction via separate permutation matrix multiplies | [
{
"change_type": "MODIFY",
"old_path": "scripts/builtin/slicefinder.dml",
"new_path": "scripts/builtin/slicefinder.dml",
"diff": "# maxL maximum level L (conjunctions of L predicates), 0 unlimited\n# minSup minimum support (min number of rows per slice)\n# alpha weight [0,1]: 0 only size, 1 only err... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2641] Improved slicefinder builtin (hybrid tp, pruning)
- New hybrid task-parallel execution w/ exposed block size (2x
performance improvement for many slices)
- New pruning before pair enumeration for zero error
- Slice extraction via separate permutation matrix multiplies |
49,738 | 15.09.2020 23:56:05 | -7,200 | fac221d67c4be8f22e4cda022d3e76cba39f37da | Fix correctness ctable operator rexpand-rows
This patch fixes a correctness issue of the special rexpand-rows
operator as applied for the following slice finder expression
map = table(ID, seq(1,nrow(P)), max(ID), nrow(P)).
The cache-conscious implementation had an offset issue in case of
ncol>blocksize (1024). The fix is a one-line modification though. | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/runtime/matrix/data/LibMatrixReorg.java",
"new_path": "src/main/java/org/apache/sysds/runtime/matrix/data/LibMatrixReorg.java",
"diff": "@@ -1996,8 +1996,9 @@ public class LibMatrixReorg\nthrow new DMLRuntimeException(\"Invalid i... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2665] Fix correctness ctable operator rexpand-rows
This patch fixes a correctness issue of the special rexpand-rows
operator as applied for the following slice finder expression
map = table(ID, seq(1,nrow(P)), max(ID), nrow(P)).
The cache-conscious implementation had an offset issue in case of
ncol>blocksize (1024). The fix is a one-line modification though. |
49,738 | 17.09.2020 21:00:26 | -7,200 | 651d59f02a578f521408f0c40d99a1b66e004f56 | Additional debug output slice finding algorithm
This patch collects the number of enumerated slices and top-k
characteristics per level into a debug matrix and returns it to the
user. Furthermore, this also includes a minor additional pruning
extension (by min error). | [
{
"change_type": "MODIFY",
"old_path": "scripts/builtin/slicefinder.dml",
"new_path": "scripts/builtin/slicefinder.dml",
"diff": "# ------------------------------------------------------------\n# TK top-k slices (k x ncol(X) if successful)\n# TKC score, size, error of slices (k x 3)\n+# D debug matr... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2461] Additional debug output slice finding algorithm
This patch collects the number of enumerated slices and top-k
characteristics per level into a debug matrix and returns it to the
user. Furthermore, this also includes a minor additional pruning
extension (by min error). |
49,704 | 18.09.2020 21:10:33 | -7,200 | 98b21a4923793e7458dfe13c2bc0a10d15f9fe72 | Fix relinking in mmchain optimization rewrite
This patch fixes the relinking logic in the matrix multiplication chain
optimization rewrite in order to support ragged input chains such as
((((a, b), c), (D, E), f), e).
Closes | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/hops/rewrite/RewriteMatrixMultChainOptimization.java",
"new_path": "src/main/java/org/apache/sysds/hops/rewrite/RewriteMatrixMultChainOptimization.java",
"diff": "@@ -22,6 +22,7 @@ package org.apache.sysds.hops.rewrite;\nimport j... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2666] Fix relinking in mmchain optimization rewrite
This patch fixes the relinking logic in the matrix multiplication chain
optimization rewrite in order to support ragged input chains such as
((((a, b), c), (D, E), f), e).
Closes #1058. |
49,689 | 19.09.2020 18:13:45 | -7,200 | 97a0df3c7837bc35206baf5b0590c99361460ec5 | Automate upload distribution archives to pypi
This patch adds a script to generate and upload distribution archives
to pypi repo. A successful test run is done to upload to testpypi repo. | [
{
"change_type": "ADD",
"old_path": null,
"new_path": "dev/release/pypi_upload.sh",
"diff": "+#!/usr/bin/env bash\n+#-------------------------------------------------------------\n+#\n+# Licensed to the Apache Software Foundation (ASF) under one\n+# or more contributor license agreements. See the NO... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2667] Automate upload distribution archives to pypi
This patch adds a script to generate and upload distribution archives
to pypi repo. A successful test run is done to upload to testpypi repo. |
49,738 | 19.09.2020 21:46:51 | -7,200 | 132f1e72896cadb25660bf5321935915ca66dcd9 | Additional R baseline for slice finding tests | [
{
"change_type": "MODIFY",
"old_path": "src/test/java/org/apache/sysds/test/functions/builtin/BuiltinSliceFinderTest.java",
"new_path": "src/test/java/org/apache/sysds/test/functions/builtin/BuiltinSliceFinderTest.java",
"diff": "@@ -22,13 +22,18 @@ package org.apache.sysds.test.functions.builtin;\n... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2641] Additional R baseline for slice finding tests |
49,706 | 21.09.2020 11:17:30 | -7,200 | e2c59779dacc6d28043a5de4a38bc620c450fb9e | [MINOR] Seperate compile and tests step function tests | [
{
"change_type": "MODIFY",
"old_path": "docker/entrypoint.sh",
"new_path": "docker/entrypoint.sh",
"diff": "cd /github/workspace\nlog=\"/tmp/sysdstest.log\"\n-\n+mvn -ntp compile test-compile\nmvn -ntp test -D maven.test.skip=false -D automatedtestbase.outputbuffering=true -D test=$1 | grep -v \"alr... | Java | Apache License 2.0 | apache/systemds | [MINOR] Seperate compile and tests step function tests |
49,700 | 21.09.2020 10:15:24 | -7,200 | 4a57b232bb57d18d429422d0f08e79ef63ed6be5 | [MINOR] Change Process to Thread FederatedWorkerHandlerTest
Closes | [
{
"change_type": "MODIFY",
"old_path": "src/test/java/org/apache/sysds/test/functions/federated/primitives/FederatedRCBindTest.java",
"new_path": "src/test/java/org/apache/sysds/test/functions/federated/primitives/FederatedRCBindTest.java",
"diff": "@@ -28,7 +28,6 @@ import org.apache.sysds.runtime.... | Java | Apache License 2.0 | apache/systemds | [MINOR] Change Process to Thread FederatedWorkerHandlerTest
Closes #1059 |
49,706 | 21.09.2020 12:56:31 | -7,200 | 0484ee7cc38cb350d4087d518ec23c360ec6e6da | [MINOR] Docker run fix, and compile reduction in tests | [
{
"change_type": "MODIFY",
"old_path": "docker/entrypoint.sh",
"new_path": "docker/entrypoint.sh",
"diff": "cd /github/workspace\nlog=\"/tmp/sysdstest.log\"\n-mvn -ntp compile test-compile\n-mvn -ntp test -D maven.test.skip=false -D automatedtestbase.outputbuffering=true -D test=$1 | grep -v \"alrea... | Java | Apache License 2.0 | apache/systemds | [MINOR] Docker run fix, and compile reduction in tests |
49,689 | 21.09.2020 19:58:07 | -7,200 | caa28818b425b2489d1d4e1abdfdeb05eceb89fd | Minor fixes in the release scripts | [
{
"change_type": "ADD",
"old_path": null,
"new_path": "dev/release/deploy.sh",
"diff": "+#!/usr/bin/env bash\n+#-------------------------------------------------------------\n+#\n+# Licensed to the Apache Software Foundation (ASF) under one\n+# or more contributor license agreements. See the NOTICE ... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2667] Minor fixes in the release scripts |
49,706 | 22.09.2020 18:24:08 | -7,200 | 89dd8feb292be9bce806c5f8c595be5799b331c2 | [MINOR] Fix ComponentTests
While debugging why the tests failed, the component tests
were changed such that they don't return exit codes based on parsing or
failing. This commit fixes that, by changing component tests to use
the same script as function- and application tests. | [
{
"change_type": "MODIFY",
"old_path": ".github/workflows/componentTests.yml",
"new_path": ".github/workflows/componentTests.yml",
"diff": "@@ -49,9 +49,9 @@ jobs:\n${{ runner.os }}-maven-test-\n- name: Component Tests\n- run: mvn -ntp test -D maven.test.skip=false -D automatedtestbase.outputbufferi... | Java | Apache License 2.0 | apache/systemds | [MINOR] Fix ComponentTests
While debugging why the tests failed, the component tests
were changed such that they don't return exit codes based on parsing or
failing. This commit fixes that, by changing component tests to use
the same script as function- and application tests. |
49,720 | 23.09.2020 23:42:35 | -7,200 | f4081004db1a22c2d06ee3d62ef76dc4a387c986 | [MINOR] fix in dropInvalidType
Logical error fix, break is replaced with continue. | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/runtime/matrix/data/FrameBlock.java",
"new_path": "src/main/java/org/apache/sysds/runtime/matrix/data/FrameBlock.java",
"diff": "@@ -1996,7 +1996,7 @@ public class FrameBlock implements CacheBlock, Externalizable {\ntype = \"INT\... | Java | Apache License 2.0 | apache/systemds | [MINOR] fix in dropInvalidType
Logical error fix, break is replaced with continue. |
49,693 | 25.09.2020 10:44:17 | -7,200 | fb6d63667db7f3062f09dc13e63432376314250e | 2664] Prepare native instructions for release 2.0
* pulled in a few CMake tricks from gpu codegen dev branch to unify lib naming
* verify MKL and OpenBLAS working
* cleanup native lib loader class (NativeHelper)
* build script for Windows
Closes | [
{
"change_type": "MODIFY",
"old_path": "src/main/cpp/CMakeLists.txt",
"new_path": "src/main/cpp/CMakeLists.txt",
"diff": "cmake_minimum_required(VERSION 3.8)\ncmake_policy(SET CMP0074 NEW) # make use of <package>_ROOT variable\n-project (systemds)\n+project (systemds LANGUAGES CXX)\n# All custom fin... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2663, 2664] Prepare native instructions for release 2.0
* pulled in a few CMake tricks from gpu codegen dev branch to unify lib naming
* verify MKL and OpenBLAS working
* cleanup native lib loader class (NativeHelper)
* build script for Windows
Closes #1063 |
49,693 | 25.09.2020 15:30:49 | -7,200 | 0b66c780e81182590cb9801c4b9eded62651ec34 | [MINOR] Add setOutputBuffering(true) to make PrintTest and StopTest2 pass | [
{
"change_type": "MODIFY",
"old_path": "src/test/java/org/apache/sysds/test/AutomatedTestBase.java",
"new_path": "src/test/java/org/apache/sysds/test/AutomatedTestBase.java",
"diff": "@@ -261,6 +261,10 @@ public abstract class AutomatedTestBase {\nTestUtils.clearAssertionInformation();\n}\n+ protect... | Java | Apache License 2.0 | apache/systemds | [MINOR] Add setOutputBuffering(true) to make PrintTest and StopTest2 pass |
49,693 | 25.09.2020 15:44:15 | -7,200 | edc9cf15e7072b10c96f6ae10cab0d647b619f85 | [Minor] Add proper winning condition for running FullSignTest and FullMinus1MultTest on GPU | [
{
"change_type": "MODIFY",
"old_path": "src/test/java/org/apache/sysds/test/functions/binary/matrix_full_cellwise/FullMinus1MultTest.java",
"new_path": "src/test/java/org/apache/sysds/test/functions/binary/matrix_full_cellwise/FullMinus1MultTest.java",
"diff": "@@ -129,7 +129,8 @@ public class FullM... | Java | Apache License 2.0 | apache/systemds | [Minor] Add proper winning condition for running FullSignTest and FullMinus1MultTest on GPU |
49,693 | 25.09.2020 16:00:45 | -7,200 | 4da7c6c7379bfbfd72f63de1cb9cf1715a5ca7a2 | 2671] Resolve problem with failing cumulative aggregate tests (indexing issue) | [
{
"change_type": "MODIFY",
"old_path": "src/main/cpp/kernels/SystemDS.ptx",
"new_path": "src/main/cpp/kernels/SystemDS.ptx",
"diff": "@@ -112,7 +112,7 @@ BB1_2:\n.param .u32 cumulative_sum_up_sweep_d_param_4\n)\n{\n- .reg .pred %p<5>;\n+ .reg .pred %p<4>;\n.reg .b32 %r<20>;\n.reg .f64 %fd<8>;\n.reg ... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2663, 2671] Resolve problem with failing cumulative aggregate tests (indexing issue) |
49,689 | 26.09.2020 13:51:19 | -7,200 | a2c17e90ff7cd6930648fd7b4a03403f88b81f28 | Fix groupid in pom | [
{
"change_type": "MODIFY",
"old_path": "dev/release/deploy.sh",
"new_path": "dev/release/deploy.sh",
"diff": "@@ -58,7 +58,8 @@ function checkout_code {\ncheckout_code\n# Remove SNAPSHOT from the version in pom\neval cd $RELEASE_WORK_DIR/systemds\n-sed -i \"s/<version>$RELEASE_VERSION-SNAPSHOT<\\/ve... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2667] Fix groupid in pom |
49,706 | 26.09.2020 14:34:45 | -7,200 | d243180cf6019e8bb94238db3de1107c4bfdf132 | [MINOR] update readme on executing systemds for release | [
{
"change_type": "MODIFY",
"old_path": "src/assembly/bin/README.md",
"new_path": "src/assembly/bin/README.md",
"diff": "@@ -30,11 +30,12 @@ limitations under the License.\nRequirements for running SystemDS are a bash shell and OpenJDK 8 or a Spark 2 cluster installation (to run distributed jobs).\nT... | Java | Apache License 2.0 | apache/systemds | [MINOR] update readme on executing systemds for release |
49,706 | 25.09.2020 19:04:21 | -7,200 | 1e7b6d416c5553ae09fe99d7472443dd02c79fad | [SYSTEMDS-2675+2676] Python Strings and printing
Add strings to python interface to enable calling SystemDS without
enforcing an transfer and parsing into python. | [
{
"change_type": "MODIFY",
"old_path": "src/main/python/systemds/context/systemds_context.py",
"new_path": "src/main/python/systemds/context/systemds_context.py",
"diff": "@@ -37,7 +37,7 @@ from py4j.protocol import Py4JNetworkError\nfrom systemds.utils.consts import VALID_INPUT_TYPES\nfrom systemds... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2675+2676] Python Strings and printing
Add strings to python interface to enable calling SystemDS without
enforcing an transfer and parsing into python. |
49,706 | 25.09.2020 19:42:46 | -7,200 | de50269f820b570841d5a79c60161b41c5b59db5 | Allow Reading unknown dimensions for algorithm input | [
{
"change_type": "MODIFY",
"old_path": "src/main/python/systemds/context/systemds_context.py",
"new_path": "src/main/python/systemds/context/systemds_context.py",
"diff": "@@ -39,6 +39,7 @@ from systemds.utils.helpers import get_module_dir\nfrom systemds.operator import OperationNode\nfrom systemds.... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2677] Allow Reading unknown dimensions for algorithm input |
49,693 | 29.09.2020 16:02:29 | -7,200 | 5461f427730656b1e18211907365eea94b32a052 | [MINOR][DOC] Added supported versions for MKL and CUDA to documentation | [
{
"change_type": "MODIFY",
"old_path": "docs/index.md",
"new_path": "docs/index.md",
"diff": "@@ -28,7 +28,8 @@ SystemDS's distinguishing characteristics are:\n2. **Multiple execution modes**, including Spark MLContext, Spark Batch, Standalone, and JMLC.\n3. **Automatic optimization** based on data ... | Java | Apache License 2.0 | apache/systemds | [MINOR][DOC] Added supported versions for MKL and CUDA to documentation |
49,689 | 30.09.2020 11:18:31 | -7,200 | 0d1d011f7cf9dcf9fb2013dba523081508cb99fc | Update bin.xml, source.xml and README | [
{
"change_type": "MODIFY",
"old_path": "README.md",
"new_path": "README.md",
"diff": "@@ -36,11 +36,8 @@ heterogeneous and nested schema.\n**Issue Tracker** [Jira Dashboard](https://issues.apache.org/jira/secure/Dashboard.jspa?selectPageId=12335852)\n-**Status and Build:** SystemDS is still in pre-a... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2667] Update bin.xml, source.xml and README |
49,698 | 29.09.2020 09:18:04 | -19,080 | 8d1dfe92499e3138d2397423930865e64d77e91c | [MINOR][DOC] Update header links and image files
Fix relative path when inside site
closes | [
{
"change_type": "ADD",
"old_path": "docs/site/img/dml-language-reference/Conv2d.gif",
"new_path": "docs/site/img/dml-language-reference/Conv2d.gif",
"diff": "Binary files /dev/null and b/docs/site/img/dml-language-reference/Conv2d.gif differ\n"
},
{
"change_type": "ADD",
"old_path": "do... | Java | Apache License 2.0 | apache/systemds | [MINOR][DOC] Update header links and image files
Fix relative path when inside site
closes #1072 |
49,720 | 05.10.2020 14:06:40 | -7,200 | 8501fb325309249e6b4414aa468f69b1a2539153 | [MINOR] minor fixes in smote
replace the rbind/cbind with indexing
rand call is updated with a seed value | [
{
"change_type": "MODIFY",
"old_path": "scripts/builtin/smote.dml",
"new_path": "scripts/builtin/smote.dml",
"diff": "@@ -46,41 +46,54 @@ return (Matrix[Double] Y) {\nprint(\"the number of samples should be an integral multiple of 100. Setting s = 100\")\ns = 100\n}\n+\n+ if(k < 1) {\n+ print(\"k sh... | Java | Apache License 2.0 | apache/systemds | [MINOR] minor fixes in smote
replace the rbind/cbind with indexing
rand call is updated with a seed value |
49,720 | 05.10.2020 14:21:28 | -7,200 | 18628f07cd027b8dd9938b5f23fee7183e8357e7 | [MINOR] minor fixes in smote.dml
for loop converted to parfor
syntax reformations suggested by Arnab | [
{
"change_type": "MODIFY",
"old_path": "scripts/builtin/smote.dml",
"new_path": "scripts/builtin/smote.dml",
"diff": "@@ -55,7 +55,7 @@ return (Matrix[Double] Y) {\n# matrix to keep the index of KNN for each minority sample\nknn_index = matrix(0,k,nrow(X))\n# find nearest neighbour\n- for(i in 1:nro... | Java | Apache License 2.0 | apache/systemds | [MINOR] minor fixes in smote.dml
for loop converted to parfor
syntax reformations suggested by Arnab |
49,738 | 10.10.2020 14:40:20 | -7,200 | ab08fc5f45b74f4dbd57136ec2c735b0d37cd7a6 | [MINOR] Fix various warnings (UINT handling, generics, static) | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/hops/LiteralOp.java",
"new_path": "src/main/java/org/apache/sysds/hops/LiteralOp.java",
"diff": "@@ -246,6 +246,7 @@ public class LiteralOp extends Hop\nswitch( getValueType() ) {\ncase BOOLEAN:\nreturn String.valueOf(value_boole... | Java | Apache License 2.0 | apache/systemds | [MINOR] Fix various warnings (UINT handling, generics, static) |
49,694 | 10.10.2020 14:55:29 | -7,200 | f2f6dbdab9fd451cfe64093b1f3b8738c314fce7 | New ALS built-in functions (als, alsCG, alsDS)
AMLS project SS2020.
Closes | [
{
"change_type": "ADD",
"old_path": null,
"new_path": "scripts/builtin/als.dml",
"diff": "+#-------------------------------------------------------------\n+#\n+# Licensed to the Apache Software Foundation (ASF) under one\n+# or more contributor license agreements. See the NOTICE file\n+# distributed... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2680] New ALS built-in functions (als, alsCG, alsDS)
AMLS project SS2020.
Closes #1070. |
49,723 | 10.10.2020 19:38:10 | -7,200 | e929457e2f1850e6f1c2b5c490523f9526e51be5 | [SYSTEMDS-2682/3] New Lasso and PPCA built-in functions
AMLS project SS2020.
Closes | [
{
"change_type": "ADD",
"old_path": null,
"new_path": "scripts/builtin/lasso.dml",
"diff": "+#-------------------------------------------------------------\n+#\n+# Licensed to the Apache Software Foundation (ASF) under one\n+# or more contributor license agreements. See the NOTICE file\n+# distribut... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2682/3] New Lasso and PPCA built-in functions
AMLS project SS2020.
Closes #1071. |
49,700 | 14.10.2020 13:10:25 | -7,200 | 76a79629db740572a0f7af116fce5afddc9f4f28 | Move Privacy Post-Processing To Be Before Lineage Cache | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/runtime/controlprogram/ProgramBlock.java",
"new_path": "src/main/java/org/apache/sysds/runtime/controlprogram/ProgramBlock.java",
"diff": "@@ -45,6 +45,7 @@ import org.apache.sysds.runtime.instructions.cp.StringObject;\nimport or... | Java | Apache License 2.0 | apache/systemds | Move Privacy Post-Processing To Be Before Lineage Cache |
49,704 | 18.10.2020 12:40:46 | -7,200 | 0dc27cfa8572d20abd697797440da45c5c261e2c | [MINOR] Fix runtime plan cost estimator (createvar instruction)
Closes | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/hops/cost/CostEstimator.java",
"new_path": "src/main/java/org/apache/sysds/hops/cost/CostEstimator.java",
"diff": "@@ -215,7 +215,7 @@ public abstract class CostEstimator\nlong rlen = Long.parseLong(parts[6]);\nlong clen = Long.p... | Java | Apache License 2.0 | apache/systemds | [MINOR] Fix runtime plan cost estimator (createvar instruction)
Closes #1079. |
49,706 | 18.10.2020 19:12:41 | -7,200 | 0ea51487153fc7bfa64d7fcd77c16fa300222030 | [MINOR] Fix sparse transpose self multiply | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/runtime/matrix/data/LibMatrixMult.java",
"new_path": "src/main/java/org/apache/sysds/runtime/matrix/data/LibMatrixMult.java",
"diff": "@@ -1932,7 +1932,7 @@ public class LibMatrixMult\nif( alen == n ) { //dense row\nfor( int i=rl... | Java | Apache License 2.0 | apache/systemds | [MINOR] Fix sparse transpose self multiply |
49,706 | 19.10.2020 13:33:25 | -7,200 | 3560a1e0a632e3c1f712d68392342648a787003c | [MINOR] Install guide for MacOS
closes | [
{
"change_type": "MODIFY",
"old_path": "docs/site/install.md",
"new_path": "docs/site/install.md",
"diff": "@@ -23,11 +23,17 @@ limitations under the License.\nThis guide helps in the install and setup of SystemDS from source code.\n+- [Windows Guide](#Windows)\n+- [Ubuntu/Linux Guide](#Ubuntu%2020.... | Java | Apache License 2.0 | apache/systemds | [MINOR] Install guide for MacOS
closes #1076 |
49,706 | 19.10.2020 14:13:10 | -7,200 | 47c52f185bb193a8d20a6a04e00a16e1881378de | [MINOR] Remove debug printing in python tests | [
{
"change_type": "MODIFY",
"old_path": "src/main/python/tests/examples/tutorials/test_mnist.py",
"new_path": "src/main/python/tests/examples/tutorials/test_mnist.py",
"diff": "@@ -104,7 +104,7 @@ class Test_DMLScript(unittest.TestCase):\nYt = Matrix(self.sds, self.d.get_test_labels()[:test_count])\n... | Java | Apache License 2.0 | apache/systemds | [MINOR] Remove debug printing in python tests |
49,706 | 20.10.2020 15:08:22 | -7,200 | c436af04f5ff28604ff2a72cea46a0736084a50d | [MINOR] Fix links install guide | [
{
"change_type": "MODIFY",
"old_path": "docs/site/install.md",
"new_path": "docs/site/install.md",
"diff": "@@ -23,9 +23,9 @@ limitations under the License.\nThis guide helps in the install and setup of SystemDS from source code.\n-- [Windows Guide](#Windows)\n-- [Ubuntu/Linux Guide](#Ubuntu%2020.04... | Java | Apache License 2.0 | apache/systemds | [MINOR] Fix links install guide |
49,706 | 20.10.2020 15:16:14 | -7,200 | 87d3a497c4eb08b4048ed07219882b92c8bae7cc | [MINOR] Second fix for install guide | [
{
"change_type": "MODIFY",
"old_path": "docs/site/install.md",
"new_path": "docs/site/install.md",
"diff": "@@ -24,8 +24,8 @@ limitations under the License.\nThis guide helps in the install and setup of SystemDS from source code.\n- [Windows Guide](#windows)\n-- [Ubuntu/Linux Guide](#ubuntu%2020.04)... | Java | Apache License 2.0 | apache/systemds | [MINOR] Second fix for install guide |
49,706 | 23.10.2020 11:43:45 | -7,200 | bc3b4f59c3f4e8fb99fcd3b9d8de8bb3fda3a85f | [MINOR] Python Left hand side ops
This commit add the left hand side ops to enable ops like:
3 > M
3 * M
furthermore this commit fixes a :bug: in transpose that did not set
shape correctly, and the same for matrix multiply. | [
{
"change_type": "MODIFY",
"old_path": "src/main/python/systemds/operator/operation_node.py",
"new_path": "src/main/python/systemds/operator/operation_node.py",
"diff": "@@ -180,38 +180,73 @@ class OperationNode(DAGNode):\ndef __add__(self, other: VALID_ARITHMETIC_TYPES) -> 'OperationNode':\nreturn ... | Java | Apache License 2.0 | apache/systemds | [MINOR] Python Left hand side ops
This commit add the left hand side ops to enable ops like:
3 > M
3 * M
furthermore this commit fixes a :bug: in transpose that did not set
shape correctly, and the same for matrix multiply. |
49,706 | 23.10.2020 11:49:34 | -7,200 | d7dab73c2f4af9156dbf672d4165f06e59988d88 | [MINOR] Fix python pca args | [
{
"change_type": "MODIFY",
"old_path": "src/main/python/systemds/operator/algorithm.py",
"new_path": "src/main/python/systemds/operator/algorithm.py",
"diff": "@@ -113,18 +113,6 @@ def pca(x: OperationNode, **kwargs: Dict[str, VALID_INPUT_TYPES]) -> OperationNo\nraise ValueError(\n\"Invalid number o... | Java | Apache License 2.0 | apache/systemds | [MINOR] Fix python pca args |
49,706 | 23.10.2020 13:08:22 | -7,200 | bcac553e00173fcd8ec222146b476909b138d54e | KMeans Predict builtin
This commit include tests in dml and the addition of
the predict in python. | [
{
"change_type": "ADD",
"old_path": null,
"new_path": "scripts/builtin/kmeansPredict.dml",
"diff": "+#-------------------------------------------------------------\n+#\n+# Licensed to the Apache Software Foundation (ASF) under one\n+# or more contributor license agreements. See the NOTICE file\n+# d... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2701] KMeans Predict builtin
This commit include tests in dml and the addition of
the predict in python. |
49,706 | 23.10.2020 13:58:35 | -7,200 | 1622e241340619916831568090d15144e0f39f94 | Row & Column Bind Python | [
{
"change_type": "MODIFY",
"old_path": "src/main/python/systemds/operator/operation_node.py",
"new_path": "src/main/python/systemds/operator/operation_node.py",
"diff": "@@ -489,3 +489,33 @@ class OperationNode(DAGNode):\nnamed_input_nodes = {\"X\": self, \"numClasses\": num_classes}\nreturn Operati... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2702] Row & Column Bind Python |
49,689 | 25.10.2020 10:55:49 | -3,600 | c05f8e2538ec2a05ccd99658f02a4beeb2823604 | [MINOR] Lineage trace and cache transform frame operations | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/runtime/instructions/cp/ParameterizedBuiltinCPInstruction.java",
"new_path": "src/main/java/org/apache/sysds/runtime/instructions/cp/ParameterizedBuiltinCPInstruction.java",
"diff": "@@ -444,7 +444,8 @@ public class Parameterized... | Java | Apache License 2.0 | apache/systemds | [MINOR] Lineage trace and cache transform frame operations |
49,689 | 25.10.2020 10:58:21 | -3,600 | a047fe5ad223f889de46373d851573fcf9123fba | Fix python distribution setup files | [
{
"change_type": "MODIFY",
"old_path": "src/main/python/setup.py",
"new_path": "src/main/python/setup.py",
"diff": "@@ -37,7 +37,7 @@ ARTIFACT_VERSION_SHORT = ARTIFACT_VERSION.split(\"-\")[0]\nREQUIRED_PACKAGES = [\n'numpy >= 1.8.2',\n- 'py4j >= 0.10.0',\n+ 'py4j >= 0.10.9',\n'jinja2 >= 2.11.2',\n'o... | Java | Apache License 2.0 | apache/systemds | [SYSTEMDS-2667] Fix python distribution setup files |
49,689 | 27.10.2020 11:07:23 | -3,600 | ad590ddebfa3328a4260c5320f957115cc203211 | [MINOR] Lineage tests cleanup
This patch removes unnecessary prints of lineage traces.
This also removes transformencode from reusable instruction list
as we don't support caching of frames yet. | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/runtime/lineage/LineageCacheConfig.java",
"new_path": "src/main/java/org/apache/sysds/runtime/lineage/LineageCacheConfig.java",
"diff": "@@ -40,7 +40,7 @@ public class LineageCacheConfig\n\"uamean\", \"max\", \"min\", \"ifelse\",... | Java | Apache License 2.0 | apache/systemds | [MINOR] Lineage tests cleanup
This patch removes unnecessary prints of lineage traces.
This also removes transformencode from reusable instruction list
as we don't support caching of frames yet. |
49,706 | 29.10.2020 10:36:53 | -3,600 | 23cc33ab2f0dfa7cbb0db6b5087a5b255dea6bfa | [MINOR] Fix fed local write
This commit fixes the federated write, such that it does not
pull the data to master, if a write is called with the federated
file format.
(This commit still does not allow writing federated modified matrices) | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/runtime/controlprogram/caching/CacheableData.java",
"new_path": "src/main/java/org/apache/sysds/runtime/controlprogram/caching/CacheableData.java",
"diff": "@@ -482,6 +482,7 @@ public abstract class CacheableData<T extends CacheB... | Java | Apache License 2.0 | apache/systemds | [MINOR] Fix fed local write
This commit fixes the federated write, such that it does not
pull the data to master, if a write is called with the federated
file format.
(This commit still does not allow writing federated modified matrices) |
49,706 | 28.10.2020 18:12:54 | -3,600 | c71a4a658009c2765b6111c99d67e31c4c0b6c74 | [MINOR] Add seed to kmeans | [
{
"change_type": "MODIFY",
"old_path": "scripts/builtin/kmeans.dml",
"new_path": "scripts/builtin/kmeans.dml",
"diff": "m_kmeans = function(Matrix[Double] X, Integer k = 10, Integer runs = 10, Integer max_iter = 1000,\n- Double eps = 0.000001, Boolean is_verbose = FALSE, Integer avg_sample_size_per_... | Java | Apache License 2.0 | apache/systemds | [MINOR] Add seed to kmeans |
49,706 | 29.10.2020 15:59:08 | -3,600 | 966908b60c40861a2bec84607510a4163f75396f | [MINOR] Fix error in exportData
Fix error in logic of export data, introduces while making
federated write instruction.
This error resulted in null matrices, if the matrices were not fully
generated, which some of our tests exploit. | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/runtime/controlprogram/caching/CacheableData.java",
"new_path": "src/main/java/org/apache/sysds/runtime/controlprogram/caching/CacheableData.java",
"diff": "@@ -482,7 +482,6 @@ public abstract class CacheableData<T extends CacheB... | Java | Apache License 2.0 | apache/systemds | [MINOR] Fix error in exportData
Fix error in logic of export data, introduces while making
federated write instruction.
This error resulted in null matrices, if the matrices were not fully
generated, which some of our tests exploit. |
49,706 | 29.10.2020 17:02:13 | -3,600 | 19266fdeffd622c7d10eaeae217d53791e87d9e3 | [MINOR] Fix federated write
Unfortunately the last fix made the previous fix break.
This commit should now finally make the write work for federated. | [
{
"change_type": "MODIFY",
"old_path": "src/main/java/org/apache/sysds/runtime/controlprogram/caching/CacheableData.java",
"new_path": "src/main/java/org/apache/sysds/runtime/controlprogram/caching/CacheableData.java",
"diff": "@@ -784,7 +784,7 @@ public abstract class CacheableData<T extends CacheB... | Java | Apache License 2.0 | apache/systemds | [MINOR] Fix federated write
Unfortunately the last fix made the previous fix break.
This commit should now finally make the write work for federated. |
49,706 | 30.10.2020 11:40:16 | -3,600 | 4898c955d54bdb44be32e1f5d228f737fffadc88 | [DOCS] Kmeans update docs | [
{
"change_type": "MODIFY",
"old_path": "docs/site/builtins-reference.md",
"new_path": "docs/site/builtins-reference.md",
"diff": "@@ -568,7 +568,7 @@ The kmeans() implements the KMeans Clustering algorithm.\n### Usage\n```r\n-kmeans(X = X, k = 20, runs = 10, max_iter = 5000, eps = 0.000001, is_verbo... | Java | Apache License 2.0 | apache/systemds | [DOCS] Kmeans update docs |
49,689 | 30.10.2020 14:40:51 | -3,600 | 079a57b3f844a712b0ff529e166e0ad1c713ba01 | [MINOR] Fix lineage tracing of SAMPLE | [
{
"change_type": "MODIFY",
"old_path": "scripts/builtin/smote.dml",
"new_path": "scripts/builtin/smote.dml",
"diff": "@@ -68,7 +68,11 @@ return (Matrix[Double] Y) {\nsynthetic_samples = matrix(0, iterLim*ncol(knn_index), ncol(X))\n# shuffle the nn indexes\n- rand_index = ifelse(k < iterLim, sample(k... | Java | Apache License 2.0 | apache/systemds | [MINOR] Fix lineage tracing of SAMPLE |
Subsets and Splits
No community queries yet
The top public SQL queries from the community will appear here once available.