LiteFold/GO · Datasets at Hugging Face

GO:0062042

62,042

regulation of cardiac epithelial to mesenchymal transition

biological_process

Any process that modulates the rate, frequency or extent of cardiac epithelial to mesenchymal transition, a transition where a cardiac epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.

[ "GOC:BHF", "GOC:rph", "PMID:20951801" ]

null

[]

[ "GO:0010717" ]

[ "regulates GO:0060317" ]

[ "regulates" ]

[ "GO:0060317" ]

[ "GO:0010717", "GO:0060317" ]

[ "GO:0065007", "regulates GO:0060317" ]

[]

dph

2018-05-10T18:09:31Z

false

true

7

GO:0062043

62,043

positive regulation of cardiac epithelial to mesenchymal transition

biological_process

Any process that starts or increases the rate, frequency or extent of cardiac epithelial to mesenchymal transition, a transition where a cardiac epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.

[ "GOC:BHF", "GOC:rph", "PMID:20951801" ]

null

[]

[ "GO:0010718", "GO:0062042" ]

[ "positively_regulates GO:0060317" ]

[ "positively_regulates" ]

[ "GO:0060317" ]

[ "GO:0010718", "GO:0060317", "GO:0062042" ]

[ "GO:0065007", "positively_regulates GO:0060317" ]

[]

dph

2018-05-10T18:15:54Z

false

true

5

GO:0062044

62,044

negative regulation of cardiac epithelial to mesenchymal transition

biological_process

Any process that stops or decreases the rate, frequency or extent of cardiac epithelial to mesenchymal transition, a transition where a cardiac epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.

[ "GOC:BFH", "GOC:rph", "PMID:20951801" ]

null

[]

[ "GO:0010719", "GO:0062042" ]

[ "negatively_regulates GO:0060317" ]

[ "negatively_regulates" ]

[ "GO:0060317" ]

[ "GO:0010719", "GO:0060317", "GO:0062042" ]

[ "GO:0065007", "negatively_regulates GO:0060317" ]

[]

dph

2018-05-10T18:21:00Z

false

true

1

GO:0062045

62,045

L-lysine:pyruvate alpha-transaminase activity

molecular_function

Catalysis of the reaction: L-lysine + pyruvate= epsilon-amino-alpha-ketocaproic acid (KAC) + alanine.

[ "PMID:27758894", "PMID:28330936" ]

null

[ "L-lysine alpha-aminotransferase activity" ]

[ "BROAD" ]

[]

[ "GO:0140385" ]

[]

[ "GO:0140385" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31140\" xsd:anyURI" ]

dph

2018-05-11T12:13:57Z

false

true

1

GO:0062046

62,046

dehydropipecolic acid reductase activity

molecular_function

Catalysis of the reaction: dehydropipecolic acid + NAD(P)H + H+ = L-pipecolic acid + NAD(P)+.

[ "PMID:27758894", "PMID:28330936" ]

null

[]

[ "GO:0016646" ]

[]

[ "GO:0016646" ]

[]

dph

2018-05-11T12:16:00Z

false

true

9

GO:0062047

62,047

pipecolic acid N-hydroxylase activity

molecular_function

Catalysis of the reaction: L-pipecolic acid + NAD(P)H + O2 + H+ = N-hydroxypipecolic acid + NAD(P)+ + H2O.

[ "PMID:27758894", "PMID:28330936" ]

null

[]

[ "GO:0016712" ]

[]

[ "GO:0016712" ]

[]

dph

2018-05-11T12:17:15Z

false

true

1

GO:0062048

62,048

lymphotoxin complex

cellular_component

A homo- or heterotrimeric protein containing complex consisting of alpha and beta lymphotoxin subunits in different stoichiometric combinations.

[ "PMID:1733951" ]

null

[ "lymphotoxin alpha-beta" ]

[ "NARROW" ]

[]

[ "GO:0032991" ]

[]

[ "GO:0032991" ]

[]

dph

2018-05-18T18:34:55Z

false

true

3

GO:0062049

62,049

protein phosphatase inhibitor complex

cellular_component

A protein-containing complex that inhibits protein phosphatase activity by directly binding to a protein phosphatase.

[ "GOC:bhm", "PMID:19407142", "PMID:19933100" ]

null

[]

[ "GO:0032991" ]

[]

[ "GO:0032991" ]

[]

dph

2018-05-30T19:03:26Z

false

true

8

GO:0062050

62,050

GPI-mannose ethanolamine phosphate phosphodiesterase activity

molecular_function

A phosphoric diester hydrolase activity that removes the ethanolamine phosphate from mannose 2 of a GPI anchor.

[ "PMID:19837036" ]

null

[]

[ "GO:0008081" ]

[]

[ "GO:0008081" ]

[]

dph

2018-06-01T18:26:54Z

false

true

3

GO:0062051

62,051

lipopolysaccharide transport system

cellular_component

A protein-containing complex that functions to transport lipopolysaccharide from its site of synthesis at the cytoplasmic membrane across the periplasm to the outer membrane in an ATP-dependent manner.

[ "PMID:29449493" ]

null

[]

[ "GO:1990351" ]

[]

[ "GO:1990351" ]

[]

dph

2018-06-04T18:44:40Z

false

true

9

GO:0062052

62,052

starch granule initiation

biological_process

The sequence of events that initiates (or primes) the synthesis of semi-crystalline starch granules within photosynthetic chloroplasts or non-photosynthetic amyloplasts.

[ "PMID:28684429" ]

null

[]

[ "GO:0019252" ]

[]

[ "GO:0019252" ]

[]

dph

2018-06-08T17:18:57Z

false

true

8

GO:0062055

62,055

photosynthetic state transition

biological_process

A regulation of the phtosynthetic light reaction in which the light harvesting antenna complexes transition between photosystems.

[ "PMID:29967049" ]

null

[]

[ "GO:0042548" ]

[]

[ "GO:0042548" ]

[]

dph

2018-07-16T14:00:57Z

false

true

3

GO:0062056

62,056

compound eye pigment cell differentiation

biological_process

The process in which a relatively unspecialized cell acquires the specialized features of a compound eye pigment cell, a cell of the retina containing screening pigments that functions to screen photoreceptors from light leaking from adjacent ommatidia.

[ "GOC:ha", "PMID:8929534" ]

null

[]

[ "GO:0050931" ]

[ "part_of GO:0001745" ]

[ "part_of" ]

[ "GO:0001745" ]

[ "GO:0001745", "GO:0050931" ]

[]

dph

2018-08-01T12:59:42Z

false

true

8

GO:0062057

62,057

L-aspartate:fumarate antiporter activity

molecular_function

Enables the transport of L-aspartate and fumarate across a membrane according to the reaction L-aspartate (out) + fumarate (in) = L-aspartate (in) + fumarate (out).

[ "PMID:29995997" ]

null

[]

[ "GO:0015138", "GO:0015183", "GO:0015297" ]

[]

[ "GO:0015138", "GO:0015183", "GO:0015297" ]

[]

dph

2018-08-09T14:25:45Z

false

true

4

GO:0062058

62,058

transcription factor TFIIH holo complex binding

molecular_function

Binding to a transcription factor TFIIH holo complex.

[ "PMID:11259578" ]

null

[]

[ "GO:0044877" ]

[]

[ "GO:0044877" ]

[]

dph

2018-08-31T13:44:17Z

false

true

6

GO:0062059

62,059

FACT complex binding

molecular_function

Binding to a FACT complex.

[ "PMID:10682845" ]

null

[]

[ "GO:0044877" ]

[]

[ "GO:0044877" ]

[]

dph

2018-08-31T13:49:30Z

false

true

7

GO:0062060

62,060

NuA4 histone acetyltransferase complex binding

molecular_function

Binding to a NuA4 histone acetyltransferase complex.

[ "PMID:15528408" ]

null

[]

[ "GO:0044877" ]

[]

[ "GO:0044877" ]

[]

dph

2018-08-31T13:51:45Z

false

true

3

GO:0062061

62,061

TAP complex binding

molecular_function

Binding to a TAP complex.

[ "PMID:17947644" ]

null

[]

[ "GO:0044877" ]

[]

[ "GO:0044877" ]

[]

dph

2018-08-31T13:54:22Z

false

true

9

GO:0062062

62,062

oligosaccharyltransferase complex binding

molecular_function

Binding to an oligosaccharyltransferase complex.

[ "PMID:12887896" ]

null

[]

[ "GO:0044877" ]

[]

[ "GO:0044877" ]

[]

dph

2018-08-31T13:56:32Z

false

true

4

GO:0062063

62,063

BBSome binding

molecular_function

Binding to a BBSome complex.

[ "PMID:20603001" ]

null

[]

[ "GO:0044877" ]

[]

[ "GO:0044877" ]

[]

dph

2018-08-31T13:59:18Z

false

true

1

GO:0062064

62,064

box C/D methylation guide snoRNP complex binding

molecular_function

Binding to a box C/D methylation guide snoRNP complex.

[ "PMID:10679015" ]

null

[]

[ "GO:0030519" ]

[]

[ "GO:0030519" ]

[]

dph

2018-08-31T14:01:03Z

false

true

3

GO:0062065

62,065

box H/ACA snoRNP complex binding

molecular_function

Binding to a box H/ACA snoRNP complex.

[ "PMID:10679015" ]

null

[]

[ "GO:0030519" ]

[]

[ "GO:0030519" ]

[]

dph

2018-08-31T14:03:43Z

false

true

5

GO:0062067

62,067

chloroplast photosystem I binding

molecular_function

Binding to a chloroplast photosystem I.

[ "PMID:17400553" ]

null

[]

[ "GO:0044877" ]

[]

[ "GO:0044877" ]

[]

dph

2018-08-31T14:07:46Z

false

true

8

GO:0062068

62,068

chloroplast photosystem II binding

molecular_function

Binding to a chloroplast photosystem II.

[ "PMID:17400553" ]

null

[]

[ "GO:0044877" ]

[]

[ "GO:0044877" ]

[]

dph

2018-08-31T14:09:17Z

false

true

6

GO:0062069

62,069

GARP complex binding

molecular_function

Binding to a GARP complex.

[ "PMID:20163565" ]

null

[]

[ "GO:0044877" ]

[]

[ "GO:0044877" ]

[]

dph

2018-08-31T14:11:17Z

false

true

7

GO:0062070

62,070

SAGA complex binding

molecular_function

Binding to a SAGA complex.

[ "PMID:27185460" ]

null

[]

[ "GO:0044877" ]

[]

[ "GO:0044877" ]

[]

dph

2018-08-31T14:13:36Z

false

true

5

GO:0062072

62,072

histone H3K9me2/3 reader activity

molecular_function

A histone reader that recognizes a histone H3 trimethylated at lysine 9. In some organisms, there is only H3K9me2, not H3K9me3, but this modification is recognized by homologous readers.

[ "PMID:30110338" ]

Comment: Note that the residue position corresponds to the canonical human H3 histone (UniProtKB:P84243); this residue is conserved across all eukaryotes. Residue 1 is the first residue following removal of the initiating Methionine (Met). Note that each histone is encoded by multiple genes, and sequences may vary acro...

[ "H3K9me3 modified histone binding", "histone H3K9me2 reader activity", "histone H3K9me3 reader activity" ]

[ "NARROW", "RELATED", "RELATED" ]

[]

[ "GO:0140006" ]

[]

[ "GO:0140006" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/27427\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/29730\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30578\" xsd:anyURI" ]

null

false

true

3

GO:0062074

62,074

pollen aperture

cellular_component

An area where exine is reduced or absent, in the pollen wall.

[ "PMID:30150313" ]

null

[]

[ "GO:0110165" ]

[ "part_of GO:0043667" ]

[ "part_of" ]

[ "GO:0043667" ]

[ "GO:0043667", "GO:0110165" ]

[]

dph

2018-09-19T19:19:58Z

false

true

5

GO:0062075

62,075

pollen aperture formation

biological_process

The cellular component assembly process of forming pollen apertures, areas where exine is reduced or absent, in the pollen cell wall.

[ "PMID:30150313" ]

null

[]

[ "GO:0010927" ]

[ "part_of GO:0010208" ]

[ "part_of" ]

[ "GO:0010208" ]

[ "GO:0010208", "GO:0010927" ]

[]

dph

2018-09-19T19:25:59Z

false

true

6

GO:0062076

62,076

acyl-CoA (8-3)-desaturase activity

molecular_function

Catalysis of the reaction: (8Z,11Z,14Z)-eicosatrienoyl-CoA + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = (5Z,8Z,11Z,14Z)-eicosatetraenoyl-CoA + 2 Fe(III)-[cytochrome b5] + 2 H2O. Can also use a substrate with 3 double bonds (a (8Z,11Z,14Z,17Z)-eicosatetraenoyl-CoA) and add a fourth double bond (a (5Z,8Z,11Z,14Z,17Z)-eicosap...

[ "PMID:10601301", "PMID:10769175", "RHEA:46424" ]

null

[ "acyl-CoA D5-desaturase activity", "acyl-CoA delta(5)-desaturase activity", "acyl-CoA delta5-desaturase activity" ]

[ "EXACT", "EXACT", "EXACT" ]

[]

[ "EC:1.14.19.44", "RHEA:46420", "RHEA:46424" ]

[ "GO:0016215" ]

[]

[ "GO:0016215" ]

[]

[ "skos:exactMatch EC:1.14.19.44", "skos:narrowMatch RHEA:46420", "skos:narrowMatch RHEA:46424", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/24103\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/29820\" xsd:anyURI", "term_tracker_item \"http...

dph

2018-09-24T15:33:59Z

false

true

8

GO:0062077

62,077

phenylacetyl-CoA 1,2-epoxidase complex

cellular_component

A protein complex capable of catalysing the reaction: phenylacetyl-CoA + H+ + NADPH + O2 = 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA + H2O + NADP+.

[ "GOC:bhm", "PMID:21247899" ]

null

[ "paaABCE complex" ]

[ "NARROW" ]

[]

[ "GO:1990204" ]

[]

[ "GO:1990204" ]

[]

dph

2018-09-27T12:40:04Z

false

true

7

GO:0062078

62,078

TSC1-TSC2 complex binding

molecular_function

Binding to a TSC1-TSC2 complex.

[ "PMID:28561066" ]

null

[ "tuberin sclerosis complex binding", "tuberin-hamartin complex binding" ]

[ "EXACT", "EXACT" ]

[]

[ "GO:0044877" ]

[]

[ "GO:0044877" ]

[]

dph

2018-10-11T12:31:42Z

false

true

5

GO:0062079

62,079

ATG2-ATG18 complex

cellular_component

A protein complex essential for autophagy during nutrient deprivation, a catabolic process that sequesters undesired cellular material into autophagosomes for delivery to lysosomes for degradation. Contributes to nutrition homeostasis and damage control in eukaryotic cells. Functions at a late step of autophagosome for...

[ "GOC:bhm", "PMID:23230146" ]

null

[]

[ "GO:0098796" ]

[ "part_of GO:0034045" ]

[ "part_of" ]

[ "GO:0034045" ]

[ "GO:0034045", "GO:0098796" ]

[]

dph

2018-10-12T13:47:25Z

false

true

8

GO:0062081

62,081

activating MHC class Ib receptor activity

molecular_function

Combining with a MHC class Ib protein complex to mediate signaling that activates a lymphocyte.

[ "DOI:10.1002/9780470015902.a0024246" ]

null

[]

[ "GO:0032394" ]

[]

[ "GO:0032394" ]

[]

dph

2018-10-15T15:05:07Z

false

true

6

GO:0062082

62,082

HLA-E specific inhibitory MHC class Ib receptor activity

molecular_function

Combining with a MHC class Ib molecule of the HLA-A subclass to mediate signaling that inhibits activation of a lymphocyte.

[ "DOI:10.1002/9780470015902.a0024246" ]

null

[]

[ "GO:0062080" ]

[]

[ "GO:0062080" ]

[]

dph

2018-10-15T15:06:22Z

false

true

6

GO:0062083

62,083

HLA-G specific inhibitory MHC class Ib receptor activity

molecular_function

Combining with a MHC class Ib molecule of the HLA-G subclass to mediate signaling that inhibits activation of a lymphocyte.

[ "DOI:10.1002/9780470015902.a0024246" ]

null

[]

[ "GO:0062080" ]

[]

[ "GO:0062080" ]

[]

dph

2018-10-15T15:06:44Z

false

true

6

GO:0062084

62,084

regulation of capsule polysaccharide biosynthetic process

biological_process

Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of polysaccharides that make up the capsule, a protective structure surrounding some species of bacteria and fungi.

[ "PMID:21917918" ]

null

[]

[ "GO:0032885", "GO:1901913" ]

[ "regulates GO:0045227" ]

[ "regulates" ]

[ "GO:0045227" ]

[ "GO:0032885", "GO:0045227", "GO:1901913" ]

[ "GO:0065007", "regulates GO:0045227" ]

[]

dph

2018-10-31T15:58:08Z

false

true

5

GO:0062085

62,085

positive regulation of capsule polysaccharide biosynthetic process

biological_process

Any process that activates, maintains or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of polysaccharides that make up the capsule, a protective structure surrounding some species of bacteria and fungi.

[ "PMID:21917918" ]

null

[]

[ "GO:0010557", "GO:0045913", "GO:0062084", "GO:1901915" ]

[ "positively_regulates GO:0045227" ]

[ "positively_regulates" ]

[ "GO:0045227" ]

[ "GO:0010557", "GO:0045227", "GO:0045913", "GO:0062084", "GO:1901915" ]

[ "GO:0065007", "positively_regulates GO:0045227" ]

[]

dph

2018-10-31T16:02:00Z

false

true

2

GO:0062086

62,086

regulation of vein smooth muscle contraction

biological_process

Any process that modulates the frequency, rate or extent of vein smooth muscle contraction.

[ "PMID:8428203" ]

null

[]

[ "GO:0003056" ]

[ "regulates GO:0014826" ]

[ "regulates" ]

[ "GO:0014826" ]

[ "GO:0003056", "GO:0014826" ]

[ "GO:0065007", "regulates GO:0014826" ]

[]

dph

2018-11-02T15:17:26Z

false

true

4

GO:0062087

62,087

positive regulation of vein smooth muscle contraction

biological_process

Any process that increases the frequency, rate or extent of vein smooth muscle contraction.

[ "PMID:8428203" ]

null

[]

[ "GO:0062086", "GO:1904695" ]

[ "positively_regulates GO:0014826" ]

[ "positively_regulates" ]

[ "GO:0014826" ]

[ "GO:0014826", "GO:0062086", "GO:1904695" ]

[ "GO:0065007", "positively_regulates GO:0014826" ]

[]

dph

2018-11-02T15:20:47Z

false

true

8

GO:0062088

62,088

negative regulation of vein smooth muscle contraction

biological_process

Any process that decreases the frequency, rate or extent of vein smooth muscle contraction.

[ "PMID:8428203" ]

null

[]

[ "GO:0062086", "GO:1904694" ]

[ "negatively_regulates GO:0014826" ]

[ "negatively_regulates" ]

[ "GO:0014826" ]

[ "GO:0014826", "GO:0062086", "GO:1904694" ]

[ "GO:0065007", "negatively_regulates GO:0014826" ]

[]

dph

2018-11-02T15:28:32Z

false

true

6

GO:0062089

62,089

regulation of taurine biosynthetic process

biological_process

Any process that modulates the rate, frequency or extent of taurine biosynthesis.

[ "GOC:BHF", "PMID:18648510", "PMID:24911144" ]

null

[]

[ "GO:0009889", "GO:0042762", "GO:0062012" ]

[ "regulates GO:0042412" ]

[ "regulates" ]

[ "GO:0042412" ]

[ "GO:0009889", "GO:0042412", "GO:0042762", "GO:0062012" ]

[ "GO:0065007", "regulates GO:0042412" ]

[]

dph

2018-11-07T14:05:44Z

false

true

1

GO:0062091

62,091

Ycf2/FtsHi complex

cellular_component

A protein complex located in the chloroplast inner membrane and facing the stroma that is associated with the chloroplast inner membrane translocase complex and provides the ATPase motor activity to drive import of proteins into the chloroplast stroma.

[ "PMID:30309901" ]

null

[ "TIC complex associated chloroplast protein import motor" ]

[ "EXACT" ]

[]

[ "GO:1904949" ]

[]

[ "GO:1904949" ]

[]

dph

2018-11-08T20:06:11Z

false

true

7

GO:0062092

62,092

Yae1-Lto1 complex

cellular_component

A cytosolic complex that functions as an substrate-specific adaptor, linking the cytosolic iron-sulfur protein assembly (CIA) targeting complex to apo-Rli1p, an ABC protein involved in ribosome recycling, facilitating Fe-S cluster insertion and the maturation of the Rli1p.

[ "PMID:26182403" ]

null

[]

[ "GO:0032991" ]

[ "part_of GO:0005829" ]

[ "part_of" ]

[ "GO:0005829" ]

[ "GO:0005829", "GO:0032991" ]

[]

dph

2018-11-15T17:39:46Z

false

true

8

GO:0062093

62,093

lysophagy

biological_process

The selective autophagy process in which a damaged lysosome is degraded by macroautophagy.

[ "PMID:28743755" ]

null

[]

[ "GO:0016236" ]

[]

[ "GO:0016236" ]

[]

dph

2018-11-20T16:47:11Z

false

true

4

GO:0062094

62,094

stomach development

biological_process

The process whose specific outcome is the progression of the stomach over time, from its formation to the mature structure. The stomach is an expanded region of the vertebrate alimentary tract that serves as a food storage compartment and digestive organ.

[ "PMID:11967278" ]

null

[]

[ "GO:0048856" ]

[ "part_of GO:0048565" ]

[ "part_of" ]

[ "GO:0048565" ]

[ "GO:0048565", "GO:0048856" ]

[]

dph

2018-11-20T18:15:45Z

false

true

4

GO:0062095

62,095

endoplasmic reticulum-peroxisome tethering

biological_process

The attachment of an endoplasmic reticulum membrane to a peroxisome via molecular tethers that physically bridge the two membranes and attach them to each other.

[ "PMID:28463579" ]

null

[]

[ "GO:0060151", "GO:0140056" ]

[]

[ "GO:0060151", "GO:0140056" ]

[]

dph

2018-11-21T13:28:50Z

false

true

8

GO:0062096

62,096

kinetochore disassembly

biological_process

The disaggregation of a kinetochore into its constituent components.

[ "GOC:mah", "PMID:27611693" ]

null

[]

[ "GO:0051383", "GO:1903008" ]

[]

[ "GO:0051383", "GO:1903008" ]

[]

dph

2018-11-26T16:34:55Z

false

true

2

GO:0062097

62,097

chemosynthesis

biological_process

The cellular metabolic process in which organic chemical compounds are synthesized from carbon-containing molecules and nutrients using energy obtained from the oxidation of inorganic compounds or methane.

[ "PMID:25050523" ]

null

[]

[ "Wikipedia:Chemosynthesis" ]

[ "GO:0008152" ]

[]

[ "GO:0008152" ]

[]

dph

2018-11-29T13:18:55Z

false

true

2

GO:0062098

62,098

regulation of programmed necrotic cell death

biological_process

Any process that modulates the frequency, rate or extent of programmed necrotic cell death.

[ "GOC:aruk", "GOC:rph", "PMID:27258785" ]

null

[]

[ "GO:0043067" ]

[ "regulates GO:0097300" ]

[ "regulates" ]

[ "GO:0097300" ]

[ "GO:0043067", "GO:0097300" ]

[ "GO:0065007", "regulates GO:0097300" ]

[]

dph

2018-11-29T14:58:26Z

false

true

6

GO:0062099

62,099

negative regulation of programmed necrotic cell death

biological_process

Any process that decreases the frequency, rate or extent of programmed necrotic cell death.

[ "GOC:aruk", "GOC:rph", "PMID:27258785" ]

null

[]

[ "GO:0043069", "GO:0062098" ]

[ "negatively_regulates GO:0097300" ]

[ "negatively_regulates" ]

[ "GO:0097300" ]

[ "GO:0043069", "GO:0062098", "GO:0097300" ]

[ "GO:0065007", "negatively_regulates GO:0097300" ]

[]

dph

2018-11-29T15:05:56Z

false

true

7

GO:0062100

62,100

positive regulation of programmed necrotic cell death

biological_process

Any process that increases the frequency, rate or extent of programmed necrotic cell death.

[ "GOC:aruk", "GOC:rph", "PMID:27258785" ]

null

[]

[ "GO:0043068", "GO:0062098" ]

[ "positively_regulates GO:0097300" ]

[ "positively_regulates" ]

[ "GO:0097300" ]

[ "GO:0043068", "GO:0062098", "GO:0097300" ]

[ "GO:0065007", "positively_regulates GO:0097300" ]

[]

dph

2018-11-29T15:08:35Z

false

true

6

GO:0062101

62,101

peptidyl-aspartic acid 3-dioxygenase activity

molecular_function

Catalysis of the reaction: protein L-aspartate + 2-oxoglutarate + O2 = protein 3-hydroxy-L-aspartate + succinate + CO2.

[ "PMID:1378441", "PMID:1856229", "RHEA:11508" ]

null

[ "aspartate beta-hydroxylase activity", "aspartyl/asparaginyl beta-hydroxylase activity", "aspartylpeptide beta-dioxygenase activity", "peptide-aspartate beta-dioxygenase activity", "peptide-L-aspartate,2-oxoglutarate:oxygen oxidoreductase (3-hydroxylating) activity" ]

[ "RELATED", "RELATED", "RELATED", "EXACT", "RELATED" ]

[ "GO:0004597" ]

[]

[ "EC:1.14.11.16", "MetaCyc:PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN", "Reactome:R-HSA-9631355 \"ASPH:Fe2+ hydroxylates an aspartate residue of F9\"", "RHEA:11508", "RHEA:54276" ]

[ "GO:0016706", "GO:0140096" ]

[]

[ "GO:0016706", "GO:0140096" ]

[]

[ "skos:exactMatch EC:1.14.11.16", "skos:exactMatch RHEA:11508", "skos:narrowMatch RHEA:54276", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/17842\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30193\" xsd:anyURI" ]

dph

2018-12-06T14:01:15Z

false

true

9

GO:0062102

62,102

female germline stem cell symmetric division

biological_process

Division of a female germline stem cell to produce two germline stem cells of the same type as the parent.

[ "GOC:ha", "PMID:30248087" ]

null

[]

[ "GO:0098729" ]

[]

[ "GO:0098729" ]

[]

dph

2018-12-18T14:17:54Z

false

true

1

GO:0062104

62,104

pumilio-response element binding

molecular_function

Binding to a region of RNA containing a Pumilio-response element element. The consensus sequence for the element is UGUAAAUA.

[ "PMID:30601114" ]

null

[ "PRE binding" ]

[ "EXACT" ]

[]

[ "GO:0003723" ]

[]

[ "GO:0003723" ]

[]

dph

2019-01-11T13:38:26Z

false

true

5

GO:0062105

62,105

RNA 2'-O-methyltransferase activity

molecular_function

Catalysis of the reaction: S-adenosyl-L-methionine + RNA = S-adenosyl-L-homocysteine + RNA containing 2'-O-methylribonucleotide.

[ "PMID:30626973", "RHEA:58956" ]

null

[]

[ "RHEA:42724", "RHEA:48628", "RHEA:56884", "RHEA:58956", "RHEA:65380" ]

[ "GO:0008171", "GO:0008173" ]

[]

[ "GO:0008171", "GO:0008173" ]

[]

[ "skos:exactMatch RHEA:58956", "skos:narrowMatch RHEA:42724", "skos:narrowMatch RHEA:48628", "skos:narrowMatch RHEA:56884", "skos:narrowMatch RHEA:65380", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30193\" xsd:anyURI" ]

dph

2019-01-23T14:23:00Z

false

true

1

GO:0062107

62,107

regulation of protein localization to non-growing cell tip

biological_process

Any process that modulates the frequency, rate or extent of protein localization to a non-growing cell tip.

[ "PMID:18328707" ]

null

[]

[ "GO:1903066" ]

[ "regulates GO:1902487" ]

[ "regulates" ]

[ "GO:1902487" ]

[ "GO:1902487", "GO:1903066" ]

[ "GO:0065007", "regulates GO:1902487" ]

[]

dph

2019-02-05T12:59:18Z

false

true

2

GO:0062108

62,108

negative regulation of protein localization to non-growing cell tip

biological_process

Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to a non-growing cell tip.

[ "PMID:18328707" ]

null

[]

[ "GO:0062107", "GO:1903067" ]

[ "negatively_regulates GO:1902487" ]

[ "negatively_regulates" ]

[ "GO:1902487" ]

[ "GO:0062107", "GO:1902487", "GO:1903067" ]

[ "GO:0065007", "negatively_regulates GO:1902487" ]

[]

dph

2019-02-05T13:03:52Z

false

true

7

GO:0062109

62,109

regulation of DNA recombinase disassembly

biological_process

Any process that modulates the rate, frequency or extent of DNA recombinase disassembly, the disaggregation of a DNA recombinase complex into its constituent components.

[ "PMID:30297419" ]

null

[]

[ "GO:0043244" ]

[ "regulates GO:1990986" ]

[ "regulates" ]

[ "GO:1990986" ]

[ "GO:0043244", "GO:1990986" ]

[ "GO:0065007", "regulates GO:1990986" ]

[]

dph

2019-02-05T13:53:19Z

false

true

9

GO:0062110

62,110

negative regulation of DNA recombinase disassembly

biological_process

Any process that stops, prevents, or reduces the frequency, rate or extent of DNA recombinase complex disassembly, the disaggregation of a DNA recombinase complex into its constituent components.

[ "PMID:30297419" ]

null

[]

[ "GO:0043242", "GO:0062109" ]

[ "negatively_regulates GO:1990986" ]

[ "negatively_regulates" ]

[ "GO:1990986" ]

[ "GO:0043242", "GO:0062109", "GO:1990986" ]

[ "GO:0065007", "negatively_regulates GO:1990986" ]

[]

dph

2019-02-05T13:57:35Z

false

true

7

GO:0062112

62,112

fatty acid primary amide biosynthetic process

biological_process

The chemical reactions and pathways resulting in the formation of a fatty acid primary amide.

[ "PMID:10079066", "PMID:15952893" ]

null

[ "FAPA biosynthesis", "FAPA biosynthetic process", "fatty acid amide biosynthesis" ]

[ "EXACT", "EXACT", "EXACT" ]

[]

[ "GO:0062126", "GO:1901570" ]

[]

[ "GO:0062126", "GO:1901570" ]

[]

dph

2019-02-20T12:49:43Z

false

true

3

GO:0062113

62,113

early phagosome lumen

cellular_component

The volume enclosed by the membrane of an early phagosome.

[ "PMID:18813294" ]

null

[ "early phagocytic vesicle lumen" ]

[ "EXACT" ]

[]

[ "GO:0097013" ]

[ "part_of GO:0032009" ]

[ "part_of" ]

[ "GO:0032009" ]

[ "GO:0032009", "GO:0097013" ]

[ "GO:0031974", "part_of GO:0032009" ]

[]

dph

2019-02-22T12:58:47Z

false

true

1

GO:0062116

62,116

phenyloplast

cellular_component

A chloroplast-derived plastid in which the solid form of phenol is stored.

[ "PMID:24683183" ]

null

[]

[ "GO:0009536" ]

[]

[ "GO:0009536" ]

[]

dph

2019-03-15T11:57:05Z

false

true

1

GO:0062119

62,119

LinE complex

cellular_component

A protein complex that associates with chromatin to form linear elements in fission yeast. In S. pombe, the LinE complex contains four main structural components (Rec10, Rec25, Rec27, and Mug20) and other associated proteins.

[ "PMID:30640914" ]

null

[]

[ "GO:0140513" ]

[]

[ "GO:0140513" ]

[]

dph

2019-03-19T14:00:26Z

false

true

3

GO:0062120

62,120

LinE complex assembly

biological_process

The aggregation, arrangement and bonding together of a set of components during meiotic prophase to form a LinE complex, the protein complex that associates with chromatin to form linear elements in fission yeast. In S. pombe, the LinE complex contains four main structural components (Rec10, Rec25, Rec27, and Mug20) an...

[ "PMID:30640914" ]

null

[]

[ "GO:0065003", "GO:1903046" ]

[ "part_of GO:0030999" ]

[ "part_of" ]

[ "GO:0030999" ]

[ "GO:0030999", "GO:0065003", "GO:1903046" ]

[]

dph

2019-03-19T14:14:25Z

false

true

6

GO:0062121

62,121

linear element maturation

biological_process

The meiotic cell cycle chromosome organization process in which LinE complexes closely associate with chromatin during meiotic prophase to form mature linear elements.

[ "PMID:30640914" ]

null

[ "LinE chromosome loading", "LinE focus formation" ]

[ "EXACT", "EXACT" ]

[]

[ "GO:0070192" ]

[ "part_of GO:0030999" ]

[ "part_of" ]

[ "GO:0030999" ]

[ "GO:0030999", "GO:0070192" ]

[]

dph

2019-03-19T14:19:27Z

false

true

4

GO:0062122

62,122

histone H3K37 methyltransferase activity

molecular_function

Catalysis of the reaction: S-adenosyl-L-methionine + histone H3 L-lysine (position 37) = S-adenosyl-L-homocysteine + histone H3 N6-methyl-L-lysine (position 37). This reaction is the addition of a methyl group to the lysine residue at position 37 of the histone H3 protein.

[ "PMID:30773398" ]

Comment: Note that the residue position corresponds to the canonical human H3 histone (UniProtKB:P84243); this residue is conserved across all eukaryotes. Residue 1 is the first residue following removal of the initiating Methionine (Met). Note that each histone is encoded by multiple genes, and sequences may vary acro...

[ "histone H3K37 methylase activity", "histone lysine N-methyltransferase activity (H3-K37 specific)", "histone methyltransferase activity (H3-K37 specific)", "histone-H3K37 methyltransferase activity" ]

[ "EXACT", "EXACT", "EXACT", "EXACT" ]

[]

[ "GO:0016279", "GO:0140938" ]

[]

[ "GO:0016279", "GO:0140938" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/24337\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/28520\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30578\" xsd:anyURI" ]

dph

2019-04-01T13:30:11Z

false

true

2

GO:0062123

62,123

regulation of linear element maturation

biological_process

Any process that modulates the rate, frequency or extent of linear element maturation.

[ "PMID:30640914" ]

null

[]

[ "GO:0033044", "GO:0090006" ]

[ "regulates GO:0062121" ]

[ "regulates" ]

[ "GO:0062121" ]

[ "GO:0033044", "GO:0062121", "GO:0090006" ]

[ "GO:0065007", "regulates GO:0062121" ]

[]

dph

2019-04-23T13:36:20Z

false

true

4

GO:0062124

62,124

4-hydroxybutyrate receptor activity

molecular_function

Combining with 4-hydroxybutyrte to initiate a change in cell activity.

[ "PMID:17197387" ]

null

[ "gamma-hydroxybutyrate receptor activity" ]

[ "EXACT" ]

[]

[ "GO:0038023" ]

[]

[ "GO:0038023" ]

[]

dph

2019-05-15T12:22:38Z

false

true

2

GO:0062125

62,125

regulation of mitochondrial gene expression

biological_process

Any process that modulates the frequency, rate or extent of mitochondrial gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product (protein or RNA).

[ "PMID:28285835" ]

null

[]

[ "GO:0010468" ]

[ "regulates GO:0140053" ]

[ "regulates" ]

[ "GO:0140053" ]

[ "GO:0010468", "GO:0140053" ]

[ "GO:0065007", "regulates GO:0140053" ]

[]

dph

2019-05-30T16:45:04Z

false

true

4

GO:0062126

62,126

fatty acid primary amide metabolic process

biological_process

The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform primary fatty amides.

[ "PMID:11128635" ]

null

[ "primary fatty amide metabolic process" ]

[ "EXACT" ]

[]

[ "GO:1901568" ]

[]

[ "GO:1901568" ]

[]

dph

2019-05-30T18:23:02Z

false

true

8

GO:0062127

62,127

fatty acid primary amide catabolic process

biological_process

The chemical reactions and pathways resulting in the breakdown of primary fatty amides.

[ "PMID:11128635" ]

null

[ "primary fatty amide catabolic process" ]

[ "EXACT" ]

[]

[ "GO:0062126", "GO:1901569" ]

[]

[ "GO:0062126", "GO:1901569" ]

[]

dph

2019-05-30T18:26:49Z

false

true

2

GO:0062128

62,128

MutSgamma complex

cellular_component

A heterodimer involved in the stabilization of DNA recombination intermediates, the promotion of crossover recombination, and the proper assembly of the synaptonemal complex in meiotic prophase nuclei. In yeast the complex consists of two subunits, Msh4 and Msh5.

[ "PMID:27648641", "PMID:7622037", "PMID:8001134", "PMID:9374523" ]

null

[ "Msh4-Msh5 complex" ]

[ "NARROW" ]

[]

[ "GO:0032300", "GO:0140513" ]

[]

[ "GO:0032300", "GO:0140513" ]

[]

dph

2019-06-04T14:48:15Z

false

true

4

GO:0062129

62,129

chitin-based extracellular matrix

cellular_component

Any constituent part of a chitin-based noncellular, hardened, or membranous extracellular matrix secreted from the apical surface of an epithelial sheet.

[ "PMID:23955854" ]

null

[ "chitin-based ECM" ]

[ "EXACT" ]

[]

[ "GO:0140047" ]

[]

[ "GO:0140047" ]

[]

dph

2019-06-13T12:57:13Z

false

true

3

GO:0062131

62,131

3-butenylglucosinolate 2-hydroxylase activity

molecular_function

Catalysis of the reaction: gluconapin + a reduced electron acceptor + O2 = xi-progoitrin + an oxidized electron acceptor + H2O.

[ "PMID:18945935" ]

null

[ "But-3-enyl Glucosinolate-2-hydroxylase activity" ]

[ "EXACT" ]

[]

[ "MetaCyc:RXNQT-4343", "RHEA:60628" ]

[ "GO:0051213" ]

[]

[ "GO:0051213" ]

[]

[ "skos:exactMatch RHEA:60628", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30193\" xsd:anyURI" ]

dph

2019-06-24T16:45:18Z

false

true

6

GO:0062132

62,132

regulation of L-glutamine biosynthetic process

biological_process

Any process that modulates the rate, frequency or extent of L-glutamine biosynthesis.

[ "GOC:ha", "PMID:19755423" ]

null

[]

[ "GO:0062012", "GO:2000282" ]

[ "regulates GO:1901704" ]

[ "regulates" ]

[ "GO:1901704" ]

[ "GO:0062012", "GO:1901704", "GO:2000282" ]

[ "GO:0065007", "regulates GO:1901704" ]

[]

dph

2019-06-27T13:44:21Z

false

true

7

GO:0062133

62,133

negative regulation of L-glutamine biosynthetic process

biological_process

Any process that stops, prevents or reduces the frequency, rate or extent of L-glutamine biosynthesis.

[ "GOC:ha", "PMID:19755423" ]

null

[]

[ "GO:0062014", "GO:0062132", "GO:2000283" ]

[ "negatively_regulates GO:1901704" ]

[ "negatively_regulates" ]

[ "GO:1901704" ]

[ "GO:0062014", "GO:0062132", "GO:1901704", "GO:2000283" ]

[ "GO:0065007", "negatively_regulates GO:1901704" ]

[]

dph

2019-06-27T13:47:21Z

false

true

7

GO:0062134

62,134

positive regulation of L-glutamine biosynthetic process

biological_process

Any process that starts, increases the frequency, rate or extent of L-glutamine biosynthesis.

[ "GOC:ha", "PMID:19755423" ]

null

[]

[ "GO:0062013", "GO:0062132", "GO:2000284" ]

[ "positively_regulates GO:1901704" ]

[ "positively_regulates" ]

[ "GO:1901704" ]

[ "GO:0062013", "GO:0062132", "GO:1901704", "GO:2000284" ]

[ "GO:0065007", "positively_regulates GO:1901704" ]

[]

dph

2019-06-27T13:49:29Z

false

true

7

GO:0062136

62,136

low-density lipoprotein receptor complex

cellular_component

A plasma membrane protein complex capable of low-density lipoprotein particle receptor activity. It may also bind xenobiotic toxins and deliver them into the cell via endocytosis. While most substrates get degraded via the endosome the receptor is recycled to the plasma membrane. It may also act as a transducer of intr...

[ "GOC:bhm", "PMID:26005850" ]

null

[ "LDL receptor complex", "LDLR complex", "low-density lipoprotein particle receptor complex" ]

[ "EXACT", "EXACT", "EXACT" ]

[]

[ "GO:0062137", "GO:0098797" ]

[]

[ "GO:0062137", "GO:0098797" ]

[]

dph

2019-07-02T13:41:28Z

false

true

9

GO:0062137

62,137

cargo receptor complex

cellular_component

Any protein complex that is part of a membrane and which functions as a cargo receptor.

[ "PMID:27903609" ]

null

[]

[ "GO:0098796" ]

[]

[ "GO:0098796" ]

[]

dph

2019-07-08T18:09:01Z

false

true

9

GO:0062139

62,139

camera-type eye photoreceptor cell development

biological_process

The process whose specific outcome is the progression of a light-responsive receptor in a camera-type eye over time, from its formation to the mature structure.

[ "PMID:20648062", "PMID:30237290" ]

null

[]

[ "GO:0042462" ]

[ "part_of GO:0043010" ]

[ "part_of" ]

[ "GO:0043010" ]

[ "GO:0042462", "GO:0043010" ]

[]

dph

2019-08-06T12:40:36Z

false

true

2

GO:0062140

62,140

hyphae septin collar

cellular_component

A septin collar in pathogenic fungi involved in the constriction of hyphae at the plant plasmodesma enabling penetration of an adjacent cell.

[ "PMID:29567712" ]

null

[ "septin collar of invasive hyphae" ]

[ "RELATED" ]

[]

[ "GO:0032173" ]

[]

[ "GO:0032173" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19013\" xsd:anyURI" ]

dph

2019-08-06T14:31:04Z

false

true

4

GO:0062141

62,141

nuclear exosome targeting complex

cellular_component

A protein-containing complex that functions with the RNA exosome and contributes to the degradation of abberant transcripts.

[ "PMID:21855801", "PMID:29844170" ]

null

[ "NEXT complex" ]

[ "EXACT" ]

[]

[ "GO:0140513" ]

[]

[ "GO:0140513" ]

[]

dph

2019-08-29T14:46:59Z

false

true

6

GO:0062142

62,142

L-beta-ethynylserine biosynthetic process

biological_process

The chemical reactions and pathways resulting in the formation of L-beta-ethynylserine. L-beta-ethynylserine is an antibiotic produced by Streptomyces bacteria.

[ "PMID:3082841", "PMID:30867596" ]

null

[]

[ "GO:0170034", "GO:0170043" ]

[]

[ "GO:0170034", "GO:0170043" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/17763\" xsd:anyURI" ]

dph

2019-09-02T16:39:59Z

false

true

7

GO:0062143

62,143

L-propargylglycine biosynthetic process

biological_process

The chemical reactions and pathways resulting in the formation of L-propargylglycine (Pra). L-propargylglycine is an antibiotic produced by Streptomyces bacteria.

[ "PMID:30867596" ]

null

[]

[ "GO:0170034", "GO:0170043" ]

[]

[ "GO:0170034", "GO:0170043" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/17763\" xsd:anyURI" ]

dph

2019-09-02T16:45:12Z

false

true

6

GO:0062144

62,144

L-propargylglycine synthase activity

molecular_function

Catalysis of the reaction: L-2-amino-4-chloropent-4-enoate = chloride + H+ + L-propargylglycine.

[ "PMID:30867596", "RHEA:59892" ]

null

[]

[ "RHEA:59892" ]

[ "GO:0016848" ]

[]

[ "GO:0016848" ]

[]

[ "skos:exactMatch RHEA:59892", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30193\" xsd:anyURI" ]

dph

2019-09-02T16:48:52Z

false

true

6

GO:0062145

62,145

L-propargylglycine--L-glutamate ligase activity

molecular_function

Catalysis of the reaction: ATP + L-glutamate + L-propargylglycine = ADP + H+ + L-gamma-glutamyl-L-propargylglycine + phosphate.

[ "PMID:30867596", "RHEA:59896" ]

null

[]

[ "RHEA:59896" ]

[ "GO:0016881" ]

[]

[ "GO:0016881" ]

[]

[ "skos:exactMatch RHEA:59896", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30193\" xsd:anyURI" ]

dph

2019-09-02T16:56:59Z

false

true

3

GO:0062146

62,146

4-chloro-allylglycine synthase activity

molecular_function

Catalysis of the reaction: 4-chloro-L-lysine + AH2 + O2 = A + formaldehyde + H2O + L-2-amino-4-chloropent-4-enoate + NH4+.

[ "PMID:30867596", "RHEA:59888" ]

null

[]

[ "RHEA:59888" ]

[ "GO:0016705" ]

[]

[ "GO:0016705" ]

[]

[ "skos:exactMatch RHEA:59888", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30193\" xsd:anyURI" ]

dph

2019-09-02T16:59:30Z

false

true

5

GO:0062147

62,147

L-lysine 4-chlorinase activity

molecular_function

Catalysis of the reaction: 2-oxoglutarate + chloride + H+ + L-lysine + O2 = 4-chloro-L-lysine + CO2 + H2O + succinate.

[ "PMID:30867596", "RHEA:59884" ]

null

[]

[ "RHEA:59884" ]

[ "GO:0050498" ]

[]

[ "GO:0050498" ]

[]

[ "skos:exactMatch RHEA:59884", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30193\" xsd:anyURI" ]

dph

2019-09-02T17:01:46Z

false

true

1

GO:0062148

62,148

L-gamma-glutamyl-L-propargylglycine hydroxylase activity

molecular_function

Catalysis of the reaction: 2-oxoglutarate + L-gamma-glutamyl-L-propargylglycine + O2 = CO2 + L-gamma-glutamyl-(3R)-L-beta-ethynylserine + succinate.

[ "PMID:30867596", "RHEA:59900" ]

null

[]

[ "RHEA:59900" ]

[ "GO:0016706" ]

[]

[ "GO:0016706" ]

[]

[ "skos:exactMatch RHEA:59900", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30193\" xsd:anyURI" ]

dph

2019-09-02T17:04:43Z

false

true

7

GO:0062149

62,149

obsolete detection of stimulus involved in sensory perception of pain

biological_process

OBSOLETE. The series of events involved in the perception of pain in which a stimulus is received and converted into a molecular signal.

[ "PMID:19837031" ]

This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31330\" xsd:anyURI" ]

dph

2019-09-13T13:48:47Z

true

9

GO:0062150

62,150

amorpha-4,11-diene 12-monooxygenase activity

molecular_function

Catalysis of the reaction:(+)-amorpha-4,11-diene + 3 O2 + 3 reduced [NADPH--hemoprotein reductase] = (+)-artemisinate + 4 H+ + 4 H2O + 3 oxidized [NADPH--hemoprotein reductase].

[ "PMID:16458889", "PMID:16612385", "PMID:23246612", "RHEA:32999" ]

null

[]

[ "EC:1.14.14.114", "RHEA:32999" ]

[ "GO:0016705" ]

[]

[ "GO:0016705" ]

[]

[ "skos:exactMatch EC:1.14.14.114", "skos:exactMatch RHEA:32999", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30193\" xsd:anyURI" ]

dph

2019-09-13T14:48:12Z

false

true

2

GO:0062152

62,152

mRNA (cytidine-5-)-methyltransferase activity

molecular_function

Catalysis of the reaction: a cytidine in mRNA + S-adenosyl-L-methionine = a 5-methylcytidine in mRNA + H+ + S-adenosyl-L-homocysteine.

[ "PMID:22395603", "PMID:23871666", "RHEA:61464" ]

null

[ "mRNA (cytosine-5-)-methyltransferase activity" ]

[ "EXACT" ]

[]

[ "RHEA:61464" ]

[ "GO:0008174" ]

[]

[ "GO:0008174" ]

[]

[ "skos:exactMatch RHEA:61464", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30193\" xsd:anyURI" ]

dph

2019-09-18T14:40:32Z

false

true

4

GO:0062153

62,153

C5-methylcytidine-containing RNA reader activity

molecular_function

A protein adaptor that recognizes and binds an RNA molecule modified by C5-methylcytidine.

[ "PMID:28418038" ]

null

[ "C5-methylcytidine-containing RNA binding", "C5-methylcytosine-containing RNA binding" ]

[ "RELATED", "RELATED" ]

[]

[ "GO:0140517" ]

[ "has_part GO:0003723" ]

[ "has_part" ]

[ "GO:0003723" ]

[ "GO:0003723", "GO:0140517" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/25788\" xsd:anyURI" ]

dph

2019-09-18T14:46:22Z

false

true

2

GO:0062154

62,154

N6-methyl-AMP deaminase activity

molecular_function

Catalysis of the reaction: H+ + H2O + N6-methyl-AMP = IMP + methylamine. Can also use N6-methyl-dAMP as a substrate.

[ "PMID:29884623", "RHEA:16001" ]

null

[ "MAPDA", "N6-mAMP deaminase activity", "N6-methyl-AMP/dAMP aminohydrolase" ]

[ "EXACT", "EXACT", "EXACT" ]

[]

[ "Reactome:R-HSA-2161187 \"ADAL1 hydrolyzes N6-methyl-AMP to IMP and methylamine\"", "Reactome:R-HSA-2161195 \"abacavir monophosphate + H2O => carbovir monophosphate + cyclopropylamine\"", "Reactome:R-HSA-9731661 \"ADAL1 hydrolyzes N6-methyl-dAMP to dIMP and methylamine\"", "RHEA:16001" ]

[ "GO:0019239" ]

[]

[ "GO:0019239" ]

[]

[ "skos:exactMatch RHEA:16001", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19833\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/21501\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30193\" xsd:anyURI" ]

dph

2019-09-20T13:16:37Z

false

true

8

GO:0062156

62,156

mitochondrial ATP-gated potassium channel activity

molecular_function

Enables the ATP-dependent diffusion of a potassium ion across the mitochondrial inner membrane.

[ "PMID:31435016" ]

null

[ "mitochondrial potassium channel activity", "mitoK-ATP activity" ]

[ "EXACT", "EXACT" ]

[]

[ "GO:0005267", "GO:0035381", "GO:0099094" ]

[]

[ "GO:0005267", "GO:0035381", "GO:0099094" ]

[]

dph

2019-09-20T16:07:07Z

false

true

5

GO:0062157

62,157

mitochondrial ATP-gated potassium channel complex

cellular_component

A protein-containing complex that is capable of the ATP-dependent diffusion of a potassium ion across the mitochondrial inner membrane.

[ "PMID:31435016" ]

null

[]

[ "GO:0034705" ]

[]

[ "GO:0034705" ]

[]

dph

2019-09-20T16:17:05Z

false

true

3

GO:0062158

62,158

chloride:proton antiporter activity

molecular_function

Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: chloride(out) + proton(in) = chloride(in) + proton(out).

[ "PMID:14985752" ]

null

[]

[ "GO:0005452", "GO:0015078", "GO:0015108" ]

[]

[ "GO:0005452", "GO:0015078", "GO:0015108" ]

[]

dph

2019-09-24T19:26:32Z

false

true

4

GO:0062159

62,159

contractile vacuole complex

cellular_component

A non-membrane-bounded organelle of eukaryotic cells, especially Protozoa, that fills with water from the cytoplasm and then discharges this externally. One of its functions is osmoregulatory.

[ "PMID:23890380" ]

null

[ "CVC" ]

[ "RELATED" ]

[]

[ "GO:0043232" ]

[]

[ "GO:0043232" ]

[]

dph

2019-09-26T14:20:14Z

false

true

2

GO:0062160

62,160

spongiome

cellular_component

A cellular anatomical entity which is a network of tubules and vessicles and is part of the contractile vacuole complex. It is involved in the discharge of water externally. One of its functions is osmoregulatory.

[ "PMID:23890380" ]

null

[]

[ "GO:0110165" ]

[ "part_of GO:0062159" ]

[ "part_of" ]

[ "GO:0062159" ]

[ "GO:0062159", "GO:0110165" ]

[]

dph

2019-09-26T14:30:41Z

false

true

5