Datasets:
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GO

Dataset card Data Studio Files
xet
 Community
go_id
string
go_numeric_id
int64
name
string
namespace
string
definition
string
definition_xrefs
list
comment
string
synonyms
list
synonym_scopes
list
alt_ids
list
subsets
list
xrefs
list
is_a_ids
list
relationship_edges
list
relationship_types
list
relationship_target_ids
list
parent_ids
list
intersection_of
list
union_of
list
disjoint_from
list
replaced_by
list
consider
list
property_values
list
created_by
string
creation_date
string
is_obsolete
bool
in_go_basic
bool
split_bucket
int64
GO:0071739
71,739
IgD immunoglobulin complex, circulating
cellular_component
A protein complex composed of two identical immunoglobulin heavy chains of the IgD isotype and two identical immunoglobulin light chains, held together by disulfide bonds, and present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.
[ "GOC:add", "ISBN:0781765196", "PMID:11282392" ]
Note that an IgD immunoglobulin complex has the function of antigen binding if a suitable antigen is available.
[ "IgD antibody" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0042571", "GO:0071738" ]
[]
[]
[]
[ "GO:0042571", "GO:0071738" ]
[]
[]
[]
[]
[]
[]
mah
2010-03-24T01:44:53Z
false
true
6
GO:0071740
71,740
IgD B cell receptor complex
cellular_component
An IgD immunoglobulin complex that is present in the plasma membrane of B cells and is composed of two identical immunoglobulin heavy chains of the IgD isotype and two identical immunoglobulin light chains and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins.
[ "GOC:add", "ISBN:0781765196", "PMID:11282392" ]
Note that an IgD immunoglobulin complex has the function of antigen binding if a suitable antigen is available.
[ "membrane-bound IgD", "surface IgD" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0019815", "GO:0071738" ]
[]
[]
[]
[ "GO:0019815", "GO:0071738" ]
[]
[]
[]
[]
[]
[]
mah
2010-03-24T01:44:53Z
false
true
6
GO:0071741
71,741
IgD immunoglobulin complex, GPI-anchored
cellular_component
A protein complex composed of two identical immunoglobulin heavy chains of the IgD isotype and two identical immunoglobulin light chains, held together by disulfide bonds, and bound via a GPI-anchor to the plasma membrane of B cells.
[ "GOC:add", "ISBN:0781765196", "PMID:11282392" ]
Note that an IgD immunoglobulin complex has the function of antigen binding if a suitable antigen is available.
[ "GPI-anchored IgD" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0071738" ]
[]
[]
[]
[ "GO:0071738" ]
[]
[]
[]
[]
[]
[]
mah
2010-03-24T01:44:53Z
false
true
9
GO:0071742
71,742
IgE immunoglobulin complex
cellular_component
A protein complex composed of two identical immunoglobulin heavy chains of the IgE isotype and two identical immunoglobulin light chains, held together by disulfide bonds. An IgE immunoglobulin complex may be embedded in the plasma membrane or present in the extracellular space, in mucosal areas or other tissues, or ci...
[ "GOC:add", "ISBN:0781765196" ]
Note that an IgE immunoglobulin complex has the function of antigen binding if a suitable antigen is available.
[]
[]
[]
[]
[]
[ "GO:0019814" ]
[]
[]
[]
[ "GO:0019814" ]
[]
[]
[]
[]
[]
[]
mah
2010-03-24T01:44:53Z
false
true
3
GO:0071743
71,743
IgE immunoglobulin complex, circulating
cellular_component
A protein complex composed of two identical immunoglobulin heavy chains of the IgE isotype and two identical immunoglobulin light chains, held together by disulfide bonds, and present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.
[ "GOC:add", "ISBN:0781765196" ]
Note that an IgE immunoglobulin complex has the function of antigen binding if a suitable antigen is available.
[ "IgE antibody" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0042571", "GO:0071742" ]
[]
[]
[]
[ "GO:0042571", "GO:0071742" ]
[]
[]
[]
[]
[]
[]
mah
2010-03-24T01:44:53Z
false
true
8
GO:0071744
71,744
IgE B cell receptor complex
cellular_component
An IgE immunoglobulin complex that is present in the plasma membrane of B cells and is composed of two identical immunoglobulin heavy chains of the IgE isotype and two identical immunoglobulin light chains and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins.
[ "GOC:add", "ISBN:0781765196" ]
Note that an IgE immunoglobulin complex has the function of antigen binding if a suitable antigen is available.
[ "membrane-bound IgE", "surface IgE" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0019815", "GO:0071742" ]
[]
[]
[]
[ "GO:0019815", "GO:0071742" ]
[]
[]
[]
[]
[]
[]
mah
2010-03-24T01:44:53Z
false
true
3
GO:0071745
71,745
IgA immunoglobulin complex
cellular_component
A protein complex composed of two identical immunoglobulin heavy chains of the IgA isotype and two identical immunoglobulin light chains, held together by disulfide bonds, and sometimes complexed with J chain or J chain and secretory component. An IgA immunoglobulin complex may be embedded in the plasma membrane or pre...
[ "GOC:add", "ISBN:0781765196", "PMID:16362985" ]
Note that an IgA immunoglobulin complex has the function of antigen binding if a suitable antigen is available.
[ "IgA1 antibody", "IgA2 antibody" ]
[ "NARROW", "NARROW" ]
[]
[]
[]
[ "GO:0019814" ]
[]
[]
[]
[ "GO:0019814" ]
[]
[]
[]
[]
[]
[]
mah
2010-03-24T01:44:53Z
false
true
8
GO:0071746
71,746
IgA immunoglobulin complex, circulating
cellular_component
A protein complex composed of two identical immunoglobulin heavy chains of an IgA isotype and two identical immunoglobulin light chains, held together by disulfide bonds, sometimes complexed with J chain or J chain and secretory component, and present in the extracellular space, in mucosal areas or other tissues, or ci...
[ "GOC:add", "ISBN:0781765196", "PMID:16362985" ]
Note that an IgA immunoglobulin complex has the function of antigen binding if a suitable antigen is available.
[ "IgA antibody", "IgA1 antibody", "IgA2 antibody" ]
[ "EXACT", "NARROW", "NARROW" ]
[]
[]
[]
[ "GO:0042571", "GO:0071745" ]
[]
[]
[]
[ "GO:0042571", "GO:0071745" ]
[]
[]
[]
[]
[]
[]
mah
2010-03-24T01:44:53Z
false
true
5
GO:0071747
71,747
IgA B cell receptor complex
cellular_component
An IgA immunoglobulin complex that is present in the plasma membrane of B cells and is composed of two identical immunoglobulin heavy chains of an IgA isotype and two identical immunoglobulin light chains and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins.
[ "GOC:add", "ISBN:0781765196", "PMID:16362985" ]
Note that an IgA immunoglobulin complex has the function of antigen binding if a suitable antigen is available.
[ "membrane-bound IgA", "membrane-bound IgA1", "membrane-bound IgA2", "surface IgA", "surface IgA1", "surface IgA2" ]
[ "NARROW", "NARROW", "NARROW", "NARROW", "NARROW", "NARROW" ]
[]
[]
[]
[ "GO:0019815", "GO:0071745" ]
[]
[]
[]
[ "GO:0019815", "GO:0071745" ]
[]
[]
[]
[]
[]
[]
mah
2010-03-24T01:44:53Z
false
true
7
GO:0071748
71,748
monomeric IgA immunoglobulin complex
cellular_component
A protein complex composed of two identical immunoglobulin heavy chains of an IgA isotype and two identical immunoglobulin light chains, held together by disulfide bonds, and present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.
[ "GOC:add", "ISBN:0781765196", "PMID:16362985" ]
Note that an IgA immunoglobulin complex has the function of antigen binding if a suitable antigen is available.
[ "monomeric IgA antibody", "monomeric IgA1 antibody", "monomeric IgA2 antibody" ]
[ "EXACT", "NARROW", "NARROW" ]
[]
[]
[]
[ "GO:0071746" ]
[]
[]
[]
[ "GO:0071746" ]
[]
[]
[]
[]
[]
[]
mah
2010-03-24T01:44:53Z
false
true
4
GO:0071749
71,749
polymeric IgA immunoglobulin complex
cellular_component
A protein complex composed of two, three, or four monomeric IgA immunoglobulin complexes linked through both direct disulfide bonds and through disulfide binded monomers of J chain acting as a bridge. Each IgA monomer consists of two identical immunoglobulin heavy chains of an IgA isotype and two identical immunoglobul...
[ "GOC:add", "ISBN:0781765196", "PMID:16362985" ]
Note that an IgA immunoglobulin complex has the function of antigen binding if a suitable antigen is available. Dimeric IgA is by far the most common form of polymeric IgA. In human only the IgA1 isotype is capable of a polymeric forms.
[ "pIgA antibody", "pIgA1 antibody", "polymeric IgA antibody", "polymeric IgA1 antibody" ]
[ "EXACT", "NARROW", "EXACT", "NARROW" ]
[]
[]
[]
[ "GO:0071746" ]
[]
[]
[]
[ "GO:0071746" ]
[]
[]
[]
[]
[]
[]
mah
2010-03-24T01:44:53Z
false
true
7
GO:0071750
71,750
dimeric IgA immunoglobulin complex
cellular_component
A protein complex composed of two monomeric IgA immunoglobulin complexes linked through both direct disulfide bonds and through a disulfide binded monomer of J chain acting as a bridge. Each IgA monomer consists of two identical immunoglobulin heavy chains of an IgA isotype and two identical immunoglobulin light chains...
[ "GOC:add", "ISBN:0781765196", "PMID:16362985" ]
Note that an IgA immunoglobulin complex has the function of antigen binding if a suitable antigen is available. Dimeric IgA is by far the most common form of polymeric IgA. In human only the IgA1 isotype is capable of a dimeric form.
[ "dimeric IgA antibody", "dimeric IgA1 antibody" ]
[ "EXACT", "NARROW" ]
[]
[]
[]
[ "GO:0071749" ]
[]
[]
[]
[ "GO:0071749" ]
[]
[]
[]
[]
[]
[]
mah
2010-03-24T01:44:53Z
false
true
3
GO:0071751
71,751
secretory IgA immunoglobulin complex
cellular_component
A polymeric IgA immunoglobulin complex that is complexed with one chain of secretory component (SC). Polymeric IgA is present in mucosal areas, having been transported via a transcytosis mechanism in mucosal epithelial cells relying on the polymeric Ig receptor, a portion of which then remains bound to the polymeric Ig...
[ "GOC:add", "ISBN:0781765196", "PMID:16362985" ]
Note that an IgA immunoglobulin complex has the function of antigen binding if a suitable antigen is available. In human only the IgA1 isotype in the polymeric form is capable of becoming secretory IgA.
[ "secretory IgA antibody", "sIgA antibody", "sIgA1 antibody" ]
[ "EXACT", "EXACT", "NARROW" ]
[]
[]
[]
[ "GO:0071749" ]
[]
[]
[]
[ "GO:0071749" ]
[]
[]
[]
[]
[]
[]
mah
2010-03-24T01:44:53Z
false
true
8
GO:0071752
71,752
secretory dimeric IgA immunoglobulin complex
cellular_component
A dimeric form of secretory IgA immunoglobulin complex.
[ "GOC:add", "ISBN:0781765196", "PMID:16362985" ]
Note that an IgA immunoglobulin complex has the function of antigen binding if a suitable antigen is available. Dimeric IgA is by far the most common form of polymeric IgA. In human only the IgA1 isotype is capable of a dimeric form.
[ "secretory dimeric IgA antibody", "secretory dimeric IgA1 antibody" ]
[ "EXACT", "NARROW" ]
[]
[]
[]
[ "GO:0071750", "GO:0071751" ]
[]
[]
[]
[ "GO:0071750", "GO:0071751" ]
[]
[]
[]
[]
[]
[]
mah
2010-03-24T01:44:53Z
false
true
2
GO:0071753
71,753
IgM immunoglobulin complex
cellular_component
A protein complex composed of two identical immunoglobulin heavy chains of the IgM isotype and two identical immunoglobulin light chains, held together by disulfide bonds, and in its circulating form complexed with J chain in polymeric forms. An IgM immunoglobulin complex may be embedded in the plasma membrane or prese...
[ "GOC:add", "ISBN:0781765196", "PMID:20176268" ]
Note that an IgM immunoglobulin complex has the function of antigen binding if a suitable antigen is available.
[]
[]
[]
[]
[]
[ "GO:0019814" ]
[]
[]
[]
[ "GO:0019814" ]
[]
[]
[]
[]
[]
[]
mah
2010-03-24T01:44:53Z
false
true
8
GO:0071754
71,754
IgM immunoglobulin complex, circulating
cellular_component
A polymer of five or six IgM core units each composed of two identical immunoglobulin heavy chains of the IgM isotype and two identical immunoglobulin light chains, held together by disulfide bonds; the individual IgM core units are held together via disulfide bonds with a single J chain polypeptide acting as a bridge ...
[ "GOC:add", "ISBN:0781765196", "PMID:20176268" ]
Note that an IgM immunoglobulin complex has the function of antigen binding if a suitable antigen is available.
[ "IgM antibody" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0042571", "GO:0071753" ]
[]
[]
[]
[ "GO:0042571", "GO:0071753" ]
[]
[]
[]
[]
[]
[]
mah
2010-03-24T01:44:53Z
false
true
7
GO:0071755
71,755
IgM B cell receptor complex
cellular_component
An IgM immunoglobulin complex that is present in the plasma membrane of B cells and is composed of two identical immunoglobulin heavy chains of the IgM isotype and two identical immunoglobulin light chains and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins.
[ "GOC:add", "ISBN:0781765196", "PMID:20176268" ]
Note that an IgM immunoglobulin complex has the function of antigen binding if a suitable antigen is available.
[ "membrane-bound IgM", "surface IgM" ]
[ "NARROW", "NARROW" ]
[]
[]
[]
[ "GO:0019815", "GO:0071753" ]
[]
[]
[]
[ "GO:0019815", "GO:0071753" ]
[]
[]
[]
[]
[]
[]
mah
2010-03-24T01:44:53Z
false
true
3
GO:0071756
71,756
pentameric IgM immunoglobulin complex
cellular_component
A circulating form of IgM consisting of a pentamer of IgM core units with a single J chain polypeptide.
[ "GOC:add", "ISBN:0781765196", "PMID:20176268" ]
Note that an IgM immunoglobulin complex has the function of antigen binding if a suitable antigen is available.
[ "pentameric IgM antibody" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0071754" ]
[]
[]
[]
[ "GO:0071754" ]
[]
[]
[]
[]
[]
[]
mah
2010-03-24T01:44:53Z
false
true
8
GO:0071757
71,757
hexameric IgM immunoglobulin complex
cellular_component
A circulating form of IgM consisting of a hexamer of IgM core units with a single J chain polypeptide.
[ "GOC:add", "ISBN:0781765196", "PMID:20176268" ]
Note that an IgM immunoglobulin complex has the function of antigen binding if a suitable antigen is available.
[ "hexameric IgM antibody" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0071754" ]
[]
[]
[]
[ "GO:0071754" ]
[]
[]
[]
[]
[]
[]
mah
2010-03-24T01:44:53Z
false
true
2
GO:0071758
71,758
IgW immunoglobulin complex
cellular_component
A protein complex composed of two identical immunoglobulin heavy chains of the IgW isotype and two identical immunoglobulin light chains, held together by disulfide bonds. An IgW immunoglobulin complex may be embedded in the plasma membrane or present in the extracellular space, in mucosal areas or other tissues, or ci...
[ "GOC:add", "ISBN:0781765196" ]
Note that an IgW immunoglobulin complex has the function of antigen binding if a suitable antigen is available. Note that IgW is found in fish.
[]
[]
[]
[]
[]
[ "GO:0019814" ]
[]
[]
[]
[ "GO:0019814" ]
[]
[]
[]
[]
[]
[]
mah
2010-03-24T01:44:53Z
false
true
8
GO:0071759
71,759
IgX immunoglobulin complex
cellular_component
A protein complex composed of two identical immunoglobulin heavy chains of the IgX isotype and two identical immunoglobulin light chains, held together by disulfide bonds. An IgX immunoglobulin complex may be embedded in the plasma membrane or present in the extracellular space, in mucosal areas or other tissues, or ci...
[ "GOC:add", "ISBN:0781765196" ]
Note that an IgX immunoglobulin complex has the function of antigen binding if a suitable antigen is available. Note that IgX is found in amphibians.
[]
[]
[]
[]
[]
[ "GO:0019814" ]
[]
[]
[]
[ "GO:0019814" ]
[]
[]
[]
[]
[]
[]
mah
2010-03-24T01:44:53Z
false
true
8
GO:0071760
71,760
IgY immunoglobulin complex
cellular_component
A protein complex composed of two identical immunoglobulin heavy chains of the IgY isotype and two identical immunoglobulin light chains, held together by disulfide bonds. An IgY immunoglobulin complex may be embedded in the plasma membrane or present in the extracellular space, in mucosal areas or other tissues, or ci...
[ "GOC:add", "ISBN:0781765196" ]
Note that an IgY immunoglobulin complex has the function of antigen binding if a suitable antigen is available. Note that IgY is found in amphibians, reptiles, and birds.
[]
[]
[]
[]
[]
[ "GO:0019814" ]
[]
[]
[]
[ "GO:0019814" ]
[]
[]
[]
[]
[]
[]
mah
2010-03-24T01:44:53Z
false
true
9
GO:0071761
71,761
IgZ immunoglobulin complex
cellular_component
A protein complex composed of two identical immunoglobulin heavy chains of the IgZ isotype and two identical immunoglobulin light chains, held together by disulfide bonds. The IgZ isotype is also known as the IgT isotype in certain species of fish.
[ "GOC:add", "ISBN:0781765196" ]
Note that an IgZ immunoglobulin complex has the function of antigen binding if a suitable antigen is available. Note that IgZ is found in bony fish, and called IgT in certain species, such as trout.
[ "IgT antibody", "IgT immunoglobulin complex", "IgZ antibody" ]
[ "NARROW", "EXACT", "NARROW" ]
[]
[]
[]
[ "GO:0019814" ]
[]
[]
[]
[ "GO:0019814" ]
[]
[]
[]
[]
[]
[]
mah
2010-03-24T01:44:53Z
false
true
1
GO:0071762
71,762
heavy chain immunoglobulin complex
cellular_component
A protein complex composed of two identical immunoglobulin heavy chains of the IgNAR isotype held together by disulfide bonds and lacking immunoglobulin light chains.
[ "GOC:add", "ISBN:0781765196", "PMID:12543123", "PMID:16051357" ]
Note that a heavy chain immunoglobulin complex has the function of antigen binding if a suitable antigen is available. Note that IgNAR is found in serum of cartilaginous fish as a heavy chain dimer without immunoglobulin light chains. Note that HCab is found in camels as a heavy chain dimer without immunoglobulin light...
[ "HCab", "Ig NAR immunoglobulin complex", "IgNAR antibody", "IgNAR immunoglobulin complex" ]
[ "NARROW", "NARROW", "NARROW", "NARROW" ]
[]
[]
[]
[ "GO:0019814" ]
[]
[]
[]
[ "GO:0019814" ]
[]
[]
[]
[]
[]
[]
mah
2010-03-24T01:44:53Z
false
true
8
GO:0071763
71,763
nuclear membrane organization
biological_process
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nuclear inner or outer membrane.
[ "GOC:mah" ]
null
[ "nuclear membrane organisation", "nuclear membrane organization and biogenesis" ]
[ "EXACT", "RELATED" ]
[]
[]
[]
[ "GO:0061024" ]
[ "part_of GO:0006998" ]
[ "part_of" ]
[ "GO:0006998" ]
[ "GO:0006998", "GO:0061024" ]
[]
[]
[]
[]
[]
[]
mah
2010-03-29T03:59:35Z
false
true
1
GO:0071765
71,765
nuclear inner membrane organization
biological_process
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nuclear inner membrane.
[ "GOC:mah" ]
null
[ "nuclear inner membrane organisation", "nuclear inner membrane organization and biogenesis" ]
[ "EXACT", "RELATED" ]
[]
[]
[]
[ "GO:0071763" ]
[]
[]
[]
[ "GO:0071763" ]
[]
[]
[]
[]
[]
[]
mah
2010-03-29T04:04:57Z
false
true
5
GO:0071766
71,766
Actinobacterium-type cell wall biogenesis
biological_process
A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cell wall of the type found in Actinobacteria. The cell wall is the rigid or semi-rigid envelope lying outside the cell membrane. Actinobacterial cell walls contain characteristic mycol...
[ "GOC:mah", "PMID:15653820", "PMID:3149973" ]
null
[]
[]
[]
[]
[]
[ "GO:0009273" ]
[]
[]
[]
[ "GO:0009273" ]
[]
[]
[]
[]
[]
[]
mah
2010-03-29T04:12:51Z
false
true
8
GO:0071767
71,767
obsolete mycolic acid metabolic process
biological_process
OBSOLETE. The chemical reactions and pathways involving mycolic acids, beta-hydroxy fatty acids with a long alpha-alkyl side chain.
[ "GOC:mah", "PMID:15653820" ]
This term was obsoleted because it is an unnecessary grouping term.
[ "mycolate metabolic process", "mycolic acid metabolism" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30524\" xsd:anyURI" ]
mah
2010-03-29T04:33:31Z
true
true
9
GO:0071768
71,768
mycolic acid biosynthetic process
biological_process
The chemical reactions and pathways resulting in the formation of mycolic acids, beta-hydroxy fatty acids with a long alpha-alkyl side chain.
[ "GOC:mah", "MetaCyc:PWYG-321", "PMID:15653820" ]
null
[ "mycolate biosynthetic process", "mycolic acid anabolism", "mycolic acid biosynthesis", "mycolic acid formation", "mycolic acid synthesis" ]
[ "EXACT", "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[ "MetaCyc:PWYG-321" ]
[ "GO:0006633", "GO:0044038" ]
[ "part_of GO:0071766" ]
[ "part_of" ]
[ "GO:0071766" ]
[ "GO:0006633", "GO:0044038", "GO:0071766" ]
[]
[]
[]
[]
[]
[]
mah
2010-03-29T04:36:10Z
false
true
7
GO:0071769
71,769
mycolate cell wall layer assembly
biological_process
The aggregation, arrangement and bonding together of a set of components, including arabinogalactan mycolate and trehalose dimycolate, to form the mycolate layer of the Actinobacterium-type cell wall. The mycolate layer is physically attached to the peptidoglycan layer.
[ "GOC:mah", "MetaCyc:PWY-6397", "PMID:15653820", "PMID:3149973" ]
null
[ "mycolate cell wall layer biogenesis" ]
[ "RELATED" ]
[]
[]
[ "MetaCyc:PWY-6397" ]
[ "GO:0022607" ]
[ "part_of GO:0071766" ]
[ "part_of" ]
[ "GO:0071766" ]
[ "GO:0022607", "GO:0071766" ]
[]
[]
[]
[]
[]
[]
mah
2010-03-29T04:40:45Z
false
true
3
GO:0071770
71,770
DIM/DIP cell wall layer assembly
biological_process
The aggregation, arrangement and bonding together of a set of components, including (phenyl)phthiocerol, phthiodiolone, phthiotriol dimycocerosate and diphthioceranate, to form the DIM/DIP layer of the Actinobacterium-type cell wall.
[ "GOC:mah", "GOC:pr", "PMID:15653820", "PMID:3149973" ]
null
[ "DIM cell wall layer assembly", "DIM/DIP cell wall layer biogenesis", "PDIM cell wall layer assembly" ]
[ "EXACT", "RELATED", "EXACT" ]
[]
[]
[]
[ "GO:0022607" ]
[ "part_of GO:0071766" ]
[ "part_of" ]
[ "GO:0071766" ]
[ "GO:0022607", "GO:0071766" ]
[]
[]
[]
[]
[]
[]
mah
2010-03-29T04:47:19Z
false
true
2
GO:0071771
71,771
aldehyde oxygenase (deformylating) activity
molecular_function
Catalysis of the reaction: a long-chain fatty aldehyde + H+ + 2 NADPH + O2 = a long-chain alkane + formate + H2O + 2 NADP+.
[ "PMID:6593720", "PMID:8718622", "RHEA:21440" ]
null
[ "aldehyde decarbonylase activity", "decarbonylase activity" ]
[ "EXACT", "EXACT" ]
[]
[]
[ "EC:4.1.99.5", "MetaCyc:OCTADECANAL-DECARBONYLASE-RXN", "MetaCyc:RXN-13262", "RHEA:21440", "RHEA:30415" ]
[ "GO:0016830" ]
[]
[]
[]
[ "GO:0016830" ]
[]
[]
[]
[]
[]
[ "skos:exactMatch EC:4.1.99.5", "skos:exactMatch RHEA:21440", "skos:narrowMatch MetaCyc:OCTADECANAL-DECARBONYLASE-RXN", "skos:narrowMatch RHEA:30415", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/25056\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontolog...
mah
2010-04-01T12:02:50Z
false
true
9
GO:0071772
71,772
response to BMP
biological_process
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bone morphogenetic protein (BMP) stimulus.
[ "GOC:mah", "GOC:yaf" ]
null
[ "response to BMP stimulus", "response to bone morphogenetic protein stimulus" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0070848" ]
[]
[]
[]
[ "GO:0070848" ]
[]
[]
[]
[]
[]
[]
mah
2010-08-31T11:02:11Z
false
true
2
GO:0071773
71,773
cellular response to BMP stimulus
biological_process
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bone morphogenetic protein (BMP) stimulus.
[ "GOC:mah", "GOC:yaf" ]
null
[ "cellular response to bone morphogenetic protein stimulus" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0071363", "GO:0071772" ]
[]
[]
[]
[ "GO:0071363", "GO:0071772" ]
[]
[]
[]
[]
[]
[]
mah
2010-08-31T11:04:45Z
false
true
3
GO:0071774
71,774
response to fibroblast growth factor
biological_process
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fibroblast growth factor stimulus.
[ "GOC:mah" ]
null
[ "response to FGF stimulus", "response to fibroblast growth factor stimulus" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0070848" ]
[]
[]
[]
[ "GO:0070848" ]
[]
[]
[]
[]
[]
[]
mah
2010-08-31T11:06:32Z
false
true
3
GO:0071778
71,778
obsolete WINAC complex
cellular_component
OBSOLETE. A SWI/SNF-type complex that directly interacts with the vitamin D receptor (VDR) through the Williams syndrome transcription factor (WSTF), and mediates the recruitment of unliganded VDR to VDR target sites in promoters. The WINAC complex contains at least 13 subunits, including WSTF, several SWI/SNF componen...
[ "GOC:BHF", "PMID:12837248" ]
This term was made obsolete because the paper describing the characterization of this complex, which was used to create this term, has been retracted.
[ "WINAC complex" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
mah
2010-08-31T12:19:54Z
true
true
4
GO:0071781
71,781
endoplasmic reticulum cisternal network
cellular_component
A subcompartment of the endoplasmic reticulum consisting of flattened, disc-shaped domains known as cisternae. These are typically found close to the nucleus and are generally more prominent in secretory cells.
[ "GOC:vw", "PMID:16469703", "PMID:20434336" ]
null
[ "ER cisternal network" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0098827" ]
[]
[]
[]
[ "GO:0098827" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-01T01:29:54Z
false
true
1
GO:0071782
71,782
endoplasmic reticulum tubular network
cellular_component
A subcompartment of the endoplasmic reticulum consisting of tubules having membranes with high curvature in cross-section.
[ "GOC:vw", "PMID:16469703", "PMID:20434336" ]
null
[ "ER tubular network" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0098827" ]
[]
[]
[]
[ "GO:0098827" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-01T01:32:55Z
false
true
1
GO:0071783
71,783
endoplasmic reticulum cisternal network organization
biological_process
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the endoplasmic reticulum (ER) cisternal network. The ER cisternal network is the ER part that comprises the membranes with low curvature in cross-section.
[ "GOC:vw", "PMID:16469703", "PMID:20434336" ]
null
[ "endoplasmic reticulum cisternal network organisation", "ER cisternal network organisation", "ER cisternal network organization" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0007029" ]
[]
[]
[]
[ "GO:0007029" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-01T01:47:28Z
false
true
3
GO:0071785
71,785
endoplasmic reticulum cisternal network maintenance
biological_process
The organization process that preserves the endoplasmic reticulum (ER) cisternal network in a stable functional or structural state. The ER cisternal network is the ER part that comprises the membranes with low curvature in cross-section.
[ "GOC:mah", "PMID:16469703", "PMID:20434336" ]
null
[ "ER cisternal network maintenance" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0043954", "GO:0071783" ]
[]
[]
[]
[ "GO:0043954", "GO:0071783" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-01T01:52:26Z
false
true
4
GO:0071786
71,786
endoplasmic reticulum tubular network organization
biological_process
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the endoplasmic reticulum (ER) tubular network. The ER tubular network is the ER part that that has membranes with high curvature in cross-section.
[ "GOC:vw", "PMID:16469703", "PMID:20434336" ]
null
[ "endoplasmic reticulum tubular network organisation", "ER tubular network organisation", "ER tubular network organization" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0007029" ]
[]
[]
[]
[ "GO:0007029" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-01T01:53:51Z
false
true
8
GO:0071788
71,788
endoplasmic reticulum tubular network maintenance
biological_process
The organization process that preserves the endoplasmic reticulum (ER) tubular network in a stable functional or structural state. The ER tubular network is the ER part that comprises the membranes with high curvature in cross-section.
[ "GOC:mah", "PMID:16469703", "PMID:20434336" ]
null
[ "ER tubular network maintenance" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0043954", "GO:0071786" ]
[]
[]
[]
[ "GO:0043954", "GO:0071786" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-01T01:55:06Z
false
true
1
GO:0071791
71,791
chemokine (C-C motif) ligand 5 binding
molecular_function
Binding to chemokine (C-C motif) ligand 5.
[ "GOC:add", "GOC:amm" ]
null
[ "CCL5 binding", "RANTES binding", "Regulated upon Activation, Normal T-cell Expressed, and Secreted binding" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0019957" ]
[]
[]
[]
[ "GO:0019957" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-01T02:28:22Z
false
true
2
GO:0071792
71,792
obsolete bacillithiol metabolic process
biological_process
OBSOLETE. The chemical reactions and pathways involving bacillithiol, the alpha-anomeric glycoside of L-cysteinyl-D-glucosamine with L-malic acid. Bacillithiol, produced widely in the Firmicutes and sporadically in other bacterial lineages, is a low-molecular-weight thiol analogous to mycothiol in the Actinomycetes and...
[ "GOC:dh", "PMID:20308541" ]
This term was obsoleted because it is an unnecessary grouping class.
[ "bacillithiol metabolism" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30524\" xsd:anyURI" ]
mah
2010-09-02T11:13:47Z
true
true
8
GO:0071793
71,793
bacillithiol biosynthetic process
biological_process
The chemical reactions and pathways resulting in the formation of bacillithiol, the alpha-anomeric glycoside of L-cysteinyl-D-glucosamine with L-malic acid. Bacillithiol, produced widely in the Firmicutes and sporadically in other bacterial lineages, is a low-molecular-weight thiol analogous to mycothiol in the Actinom...
[ "GOC:dh", "PMID:20308541" ]
null
[ "bacillithiol anabolism", "bacillithiol biosynthesis", "bacillithiol formation", "bacillithiol synthesis" ]
[ "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0016138", "GO:0044272", "GO:0046394" ]
[]
[]
[]
[ "GO:0016138", "GO:0044272", "GO:0046394" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-02T11:16:04Z
false
true
1
GO:0071794
71,794
CAP-Gly domain binding
molecular_function
Binding to a CAP-Gly domain of a protein. The CAP_Gly domain is a conserved, glycine-rich domain of about 42 residues found in some cytoskeleton-associated proteins, and features a novel protein fold containing three beta-sheets.
[ "GOC:mah", "InterPro:IPR000938" ]
null
[]
[]
[]
[]
[]
[ "GO:0019904" ]
[]
[]
[]
[ "GO:0019904" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-02T02:02:53Z
false
true
3
GO:0071795
71,795
K11-linked polyubiquitin modification-dependent protein binding
molecular_function
Binding to a protein upon poly-ubiquitination formed by linkages between lysine residues at position 11 in the target protein.
[ "GOC:sp", "PMID:18775313" ]
null
[]
[]
[]
[]
[]
[ "GO:0031593" ]
[]
[]
[]
[ "GO:0031593" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-02T02:11:41Z
false
true
2
GO:0071796
71,796
K6-linked polyubiquitin modification-dependent protein binding
molecular_function
Binding to a protein upon poly-ubiquitination formed by linkages between lysine residues at position 6 in the target protein.
[ "GOC:sp", "PMID:17525341", "PMID:20351172" ]
null
[]
[]
[]
[]
[]
[ "GO:0031593" ]
[]
[]
[]
[ "GO:0031593" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-02T02:13:07Z
false
true
2
GO:0071797
71,797
LUBAC complex
cellular_component
A ubiquitin ligase complex that catalyzes linear head-to-tail polyubiquitin conjugation on its targets. In human the complex consists of RBCK1, RNF31 and SHARPIN, and has an MW of approximately 600 kDa, suggesting a heteromultimeric assembly of its subunits. LUBAC stands for Linear Ubiquitin Chain Assembly Complex.
[ "GOC:sp", "PMID:17006537", "PMID:19136968", "PMID:21455180" ]
null
[]
[]
[]
[]
[]
[ "GO:0000151" ]
[]
[]
[]
[ "GO:0000151" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-02T04:09:55Z
false
true
2
GO:0071798
71,798
response to prostaglandin D
biological_process
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin D stimulus.
[ "GOC:sl" ]
null
[ "response to prostaglandin D stimulus" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0034694", "GO:0097305", "GO:1901654" ]
[]
[]
[]
[ "GO:0034694", "GO:0097305", "GO:1901654" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-03T10:48:03Z
false
true
4
GO:0071799
71,799
cellular response to prostaglandin D stimulus
biological_process
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin D stimulus.
[ "GOC:sl" ]
null
[]
[]
[]
[]
[]
[ "GO:0071379", "GO:0071798", "GO:0097306", "GO:1901655" ]
[]
[]
[]
[ "GO:0071379", "GO:0071798", "GO:0097306", "GO:1901655" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-03T10:48:35Z
false
true
6
GO:0071800
71,800
podosome assembly
biological_process
The aggregation, arrangement and bonding together of a set of components to form a podosome, an actin-rich adhesion structure characterized by formation upon cell substrate contact and localization at the substrate-attached part of the cell.
[ "GOC:mah", "GOC:sl" ]
null
[]
[]
[]
[]
[]
[ "GO:0065003", "GO:0140694" ]
[]
[]
[]
[ "GO:0065003", "GO:0140694" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-03T11:00:45Z
false
true
8
GO:0071801
71,801
regulation of podosome assembly
biological_process
Any process that modulates the frequency, rate or extent of podosome assembly.
[ "GOC:mah", "GOC:sl" ]
Note that the assembly is regulated by several small GTPases of the Rab and Rho families.
[]
[]
[]
[]
[]
[ "GO:0043254", "GO:1902115" ]
[ "regulates GO:0071800" ]
[ "regulates" ]
[ "GO:0071800" ]
[ "GO:0043254", "GO:0071800", "GO:1902115" ]
[ "GO:0065007", "regulates GO:0071800" ]
[]
[]
[]
[]
[]
mah
2010-09-03T01:34:29Z
false
true
8
GO:0071802
71,802
negative regulation of podosome assembly
biological_process
Any process that stops, prevents or reduces the rate or extent of podosome assembly.
[ "GOC:mah", "GOC:sl" ]
null
[ "down regulation of podosome assembly", "down-regulation of podosome assembly", "downregulation of podosome assembly", "inhibition of podosome assembly" ]
[ "EXACT", "EXACT", "EXACT", "NARROW" ]
[]
[]
[]
[ "GO:0031333", "GO:0071801", "GO:1902116" ]
[ "negatively_regulates GO:0071800" ]
[ "negatively_regulates" ]
[ "GO:0071800" ]
[ "GO:0031333", "GO:0071800", "GO:0071801", "GO:1902116" ]
[ "GO:0065007", "negatively_regulates GO:0071800" ]
[]
[]
[]
[]
[]
mah
2010-09-03T01:49:14Z
false
true
7
GO:0071805
71,805
potassium ion transmembrane transport
biological_process
A process in which a potassium ion is transported from one side of a membrane to the other.
[ "GOC:mah" ]
Note that this term is not intended for use in annotating lateral movement within membranes.
[ "high affinity potassium ion import", "high affinity potassium ion uptake", "high-affinity potassium ion import", "high-affinity potassium ion uptake", "potassium ion membrane transport" ]
[ "NARROW", "NARROW", "NARROW", "NARROW", "EXACT" ]
[ "GO:0010163" ]
[]
[ "Reactome:R-HSA-1296071 \"Potassium Channels\"" ]
[ "GO:0006813", "GO:0098655" ]
[]
[]
[]
[ "GO:0006813", "GO:0098655" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-03T02:43:49Z
false
true
8
GO:0071806
71,806
protein transmembrane transport
biological_process
The process in which a protein is transported across a membrane.
[ "GOC:mah", "GOC:vw" ]
Note that this term is not intended for use in annotating lateral movement within membranes.
[ "protein membrane transport" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0015031", "GO:0055085" ]
[]
[]
[]
[ "GO:0015031", "GO:0055085" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-03T02:54:26Z
false
true
9
GO:0071807
71,807
replication fork arrest involved in DNA replication termination
biological_process
A replication fork arrest process that contributes to the termination of DNA replication.
[ "GOC:mah", "PMID:17347517", "PMID:20797631" ]
null
[]
[]
[]
[]
[]
[ "GO:0043111" ]
[ "part_of GO:0006274" ]
[ "part_of" ]
[ "GO:0006274" ]
[ "GO:0006274", "GO:0043111" ]
[ "GO:0043111", "part_of GO:0006274" ]
[]
[]
[]
[]
[]
mah
2010-09-03T03:26:38Z
false
true
6
GO:0071808
71,808
satellite fibril
cellular_component
An axoneme part that is found in the flagella of mammalian sperm and is located in the middle piece between the outer dense fibers (on the concave side of outer dense fibers as seen in cross-section).
[ "GOC:mah", "GOC:sl", "PMID:20108326" ]
null
[]
[]
[]
[]
[]
[ "GO:0110165" ]
[ "part_of GO:0005930" ]
[ "part_of" ]
[ "GO:0005930" ]
[ "GO:0005930", "GO:0110165" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-03T03:42:14Z
false
true
3
GO:0071809
71,809
regulation of fever generation by regulation of prostaglandin biosynthesis
biological_process
Any process that modulates the rate or extent of fever generation via regulation of the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of prostaglandin.
[ "GOC:BHF", "GOC:dph", "GOC:mah" ]
null
[]
[]
[]
[]
[]
[ "GO:0031392", "GO:0031620" ]
[ "regulates GO:0100008" ]
[ "regulates" ]
[ "GO:0100008" ]
[ "GO:0031392", "GO:0031620", "GO:0100008" ]
[ "GO:0050789", "regulates GO:0100008" ]
[]
[]
[]
[]
[]
mah
2010-09-03T05:07:17Z
false
true
7
GO:0071810
71,810
regulation of fever generation by regulation of prostaglandin secretion
biological_process
Any process that modulates the rate or extent of fever generation via regulation of the frequency, rate or extent of the regulated release of a prostaglandin from a cell.
[ "GOC:BHF", "GOC:dph", "GOC:mah" ]
null
[]
[]
[]
[]
[]
[ "GO:0031620", "GO:0032306" ]
[ "regulates GO:0100009" ]
[ "regulates" ]
[ "GO:0100009" ]
[ "GO:0031620", "GO:0032306", "GO:0100009" ]
[ "GO:0050789", "regulates GO:0100009" ]
[]
[]
[]
[]
[]
mah
2010-09-03T05:09:27Z
false
true
9
GO:0071811
71,811
positive regulation of fever generation by positive regulation of prostaglandin biosynthesis
biological_process
Any process that increases the rate or extent of fever generation via positive regulation of the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of prostaglandin.
[ "GOC:BHF", "GOC:dph", "GOC:mah" ]
null
[]
[]
[]
[]
[]
[ "GO:0031394", "GO:0031622" ]
[]
[]
[]
[ "GO:0031394", "GO:0031622" ]
[ "GO:0031394", "positively_regulates GO:0001660" ]
[]
[]
[]
[]
[]
mah
2010-09-03T05:10:05Z
false
true
3
GO:0071812
71,812
positive regulation of fever generation by positive regulation of prostaglandin secretion
biological_process
Any process that increases the rate or extent of fever generation via positive regulation of the frequency, rate or extent of the regulated release of a prostaglandin from a cell.
[ "GOC:BHF", "GOC:dph", "GOC:mah" ]
null
[]
[]
[]
[]
[]
[ "GO:0031622", "GO:0032308" ]
[]
[]
[]
[ "GO:0031622", "GO:0032308" ]
[ "GO:0031622", "positively_regulates GO:0032310" ]
[]
[]
[]
[]
[]
mah
2010-09-03T05:10:36Z
false
true
2
GO:0071813
71,813
lipoprotein particle binding
molecular_function
Binding to a lipoprotein particle. A lipoprotein particle, also known as a lipoprotein, is a clathrate complex consisting of a lipid enwrapped in a protein host without covalent binding in such a way that the complex has a hydrophilic outer surface consisting of all the protein and the polar ends of any phospholipids.
[ "GOC:BHF", "GOC:mah" ]
null
[ "lipoprotein binding", "plasma lipoprotein binding", "plasma lipoprotein particle binding" ]
[ "RELATED", "RELATED", "EXACT" ]
[]
[]
[]
[ "GO:0071814" ]
[]
[]
[]
[ "GO:0071814" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-06T03:16:01Z
false
true
9
GO:0071814
71,814
protein-lipid complex binding
molecular_function
Binding to a protein-lipid complex, any macromolecular complex that contains both protein and lipid molecules.
[ "GOC:BHF", "GOC:mah" ]
null
[]
[]
[]
[]
[]
[ "GO:0044877" ]
[]
[]
[]
[ "GO:0044877" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-06T04:26:27Z
false
true
3
GO:0071815
71,815
intermediate-density lipoprotein particle binding
molecular_function
Binding to a intermediate-density lipoprotein particle, a triglyceride-rich lipoprotein particle that typically contains APOB100, APOE and APOCs and has a density of 1.006-1.019 g/ml and a diameter of between 25-30 nm.
[ "GOC:BHF", "GOC:mah" ]
null
[ "IDL binding", "intermediate-density lipoprotein binding" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0071813" ]
[]
[]
[]
[ "GO:0071813" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-06T04:28:35Z
false
true
3
GO:0071816
71,816
tail-anchored membrane protein insertion into ER membrane
biological_process
A process of protein insertion into the endoplasmic reticulum (ER) membrane in which a tail-anchored (TA) transmembrane protein is incorporated into an endoplasmic reticulum (ER) membrane. TA transmembrane protein, also named type II transmembrane proteins, contain a single C- terminal transmembrane region.
[ "GOC:mah", "GOC:sp", "PMID:20516149", "PMID:20676083" ]
null
[ "protein insertion of tail-anchored membrane proteins into ER membrane", "tail-anchored membrane protein insertion into endoplasmic reticulum membrane", "type II transmembrane protein insertion into ER membrane" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0045048" ]
[]
[]
[]
[ "GO:0045048" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-06T04:55:16Z
false
true
7
GO:0071817
71,817
MMXD complex
cellular_component
A protein complex that contains the proteins MMS19, MIP18 and XPD, localizes to mitotic spindle during mitosis, and is required for proper chromosome segregation.
[ "GOC:sp", "PMID:20797633" ]
null
[ "MMS19-MIP18-XPD complex" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0032991" ]
[ "part_of GO:0005819" ]
[ "part_of" ]
[ "GO:0005819" ]
[ "GO:0005819", "GO:0032991" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-07T10:53:42Z
false
true
1
GO:0071819
71,819
DUBm complex
cellular_component
A protein complex that forms part of SAGA-type complexes SAGA and SLIK, and mediates deubiquitination of histone H2B. In S. cerevisiae, the DUBm consists of the proteins Ubp8p, Sgf11p, Sus1p, and Sgf73p.
[ "PMID:19226466", "PMID:20395473" ]
null
[ "deubiquitinating module", "deubiquitination module", "SAGA DUBm complex" ]
[ "EXACT", "EXACT", "NARROW" ]
[]
[]
[]
[ "GO:0140513" ]
[]
[]
[]
[ "GO:0140513" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-07T11:19:28Z
false
true
4
GO:0071820
71,820
N-box binding
molecular_function
Binding to an N-box, a DNA motif with the consensus sequence CACNAG that is found in the promoters of genes expressed preferentially at synapses.
[ "GOC:yaf", "PMID:11498047" ]
null
[ "N box binding", "N-box promoter binding" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0000978" ]
[]
[]
[]
[ "GO:0000978" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-07T11:55:32Z
false
true
5
GO:0071821
71,821
FANCM-MHF complex
cellular_component
A protein complex contains the proteins FANCM and MHF, or their orthologs, plays an essential role in DNA remodeling, protects replication forks, and is conserved in eukaryotes.
[ "GOC:mah", "GOC:vw", "PMID:20347428" ]
null
[]
[]
[]
[]
[]
[ "GO:0140513" ]
[]
[]
[]
[ "GO:0140513" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-07T12:08:38Z
false
true
2
GO:0071823
71,823
protein-carbohydrate complex subunit organization
biological_process
Any process in which macromolecules aggregate, disaggregate, or are modified, resulting in the formation, disassembly, or alteration of a protein-carbohydrate complex.
[ "GOC:mah" ]
null
[ "protein-carbohydrate complex subunit organisation" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0043933" ]
[]
[]
[]
[ "GO:0043933" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-08T10:03:03Z
false
true
2
GO:0071824
71,824
protein-DNA complex organization
biological_process
Any process in which macromolecules aggregate, disaggregate, or are modified, resulting in the formation, disassembly, or alteration of a protein-DNA complex.
[ "GOC:mah" ]
null
[ "DNA-protein complex subunit organization", "protein-DNA complex subunit organisation", "protein-DNA complex subunit organization" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0043933" ]
[]
[]
[]
[ "GO:0043933" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-08T10:03:26Z
false
true
3
GO:0071826
71,826
protein-RNA complex organization
biological_process
Any process in which macromolecules aggregate, disaggregate, or are modified, resulting in the formation, disassembly, or alteration of a ribonucleoprotein complex.
[ "GOC:mah" ]
null
[ "protein-RNA complex subunit organization", "ribonucleoprotein complex subunit organisation", "ribonucleoprotein complex subunit organization", "RNA-protein complex subunit organization" ]
[ "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0043933" ]
[]
[]
[]
[ "GO:0043933" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/25143\" xsd:anyURI" ]
mah
2010-09-08T10:10:35Z
false
true
5
GO:0071827
71,827
plasma lipoprotein particle organization
biological_process
A protein-lipid complex subunit organization process that results in the formation, disassembly, or alteration of a plasma lipoprotein particle. A plasma lipoprotein particle is a spherical particle with a hydrophobic core of triglycerides and/or cholesterol esters, surrounded by an amphipathic monolayer of phospholipi...
[ "GOC:BHF", "GOC:mah" ]
null
[ "plasma lipoprotein particle organisation" ]
[ "EXACT" ]
[]
[]
[ "Reactome:R-HSA-174824 \"Plasma lipoprotein assembly, remodeling, and clearance\"" ]
[ "GO:0032501", "GO:0071825" ]
[]
[]
[]
[ "GO:0032501", "GO:0071825" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-08T10:32:26Z
false
true
6
GO:0071828
71,828
apolipoprotein E recycling
biological_process
The process in which chylomicron remnant-associated apolipoprotein E is internalized by endocytosis, localized to recycling endosomes and then secreted in association with a high-density lipoprotein particle.
[ "GOC:BHF", "PMID:16373604" ]
null
[ "APOE recycling" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0015031" ]
[ "part_of GO:0034380", "part_of GO:0034382" ]
[ "part_of", "part_of" ]
[ "GO:0034380", "GO:0034382" ]
[ "GO:0015031", "GO:0034380", "GO:0034382" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-08T11:05:15Z
false
true
1
GO:0071829
71,829
plasma lipoprotein particle disassembly
biological_process
The disaggregation of a plasma lipoprotein particle into its constituent components.
[ "GOC:mah" ]
null
[]
[]
[]
[]
[]
[ "GO:0032987", "GO:0071827" ]
[ "part_of GO:0097006" ]
[ "part_of" ]
[ "GO:0097006" ]
[ "GO:0032987", "GO:0071827", "GO:0097006" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-08T11:14:21Z
false
true
5
GO:0071830
71,830
triglyceride-rich lipoprotein particle clearance
biological_process
The process in which a triglyceride-rich lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.
[ "GOC:BHF" ]
null
[]
[]
[]
[]
[]
[ "GO:0034381" ]
[]
[]
[]
[ "GO:0034381" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-08T11:23:55Z
false
true
1
GO:0071831
71,831
intermediate-density lipoprotein particle clearance
biological_process
The process in which a intermediate-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.
[ "GOC:BHF" ]
null
[ "IDL clearance" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0071830" ]
[]
[]
[]
[ "GO:0071830" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-08T11:26:12Z
false
true
1
GO:0071834
71,834
mating pheromone secretion
biological_process
The regulated release of a mating pheromone, a peptide hormone that induces a behavioral or physiological response(s) from a responding organism or cell, that contributes to a process of sexual reproduction.
[ "GOC:mah" ]
null
[ "mating-type pheromone secretion" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0030072" ]
[]
[]
[]
[ "GO:0030072" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-09T11:22:35Z
false
true
1
GO:0071835
71,835
obsolete mating pheromone secretion involved in regulation of conjugation with cellular fusion
biological_process
OBSOLETE. The regulated release of a mating pheromone, a peptide hormone that induces a behavioral or physiological response(s) from a responding organism or cell, that regulates the union or introduction of genetic information from compatible mating types that results in a genetically different individual. Conjugation...
[ "GOC:elh", "GOC:jh", "GOC:mah" ]
This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
[ "mating pheromone secretion involved in regulation of conjugation", "mating-type pheromone secretion involved in conjugation", "peptide pheromone export involved in regulation of conjugation" ]
[ "RELATED", "EXACT", "BROAD" ]
[ "GO:0071832" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31306\" xsd:anyURI" ]
mah
2010-09-09T11:23:19Z
true
true
4
GO:0071836
71,836
nectar secretion
biological_process
The controlled release of a nectar by a cell or a tissue. Nectar is a fluid secreted by many angiosperms to promote pollination by providing a reward to pollinators. Nectar may also deter certain organisms from visiting or play other biological roles. Nectar is a complex solution that may include the following types of...
[ "GOC:kad", "PMID:19861655" ]
null
[ "nectar production" ]
[ "RELATED" ]
[]
[]
[]
[ "GO:0046903" ]
[]
[]
[]
[ "GO:0046903" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-09T01:06:04Z
false
true
5
GO:0071837
71,837
HMG box domain binding
molecular_function
Binding to an HMG box domain, a protein domain that consists of three helices in an irregular array. HMG-box domains are found in one or more copies in HMG-box proteins, which form a large, diverse family involved in the regulation of DNA-dependent processes such as transcription, replication, and strand repair, all of...
[ "GOC:yaf", "InterPro:IPR009071", "PMID:18445004" ]
null
[]
[]
[]
[]
[]
[ "GO:0019904" ]
[]
[]
[]
[ "GO:0019904" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-10T12:05:45Z
false
true
8
GO:0071838
71,838
cell proliferation in bone marrow
biological_process
The multiplication or reproduction of cells, resulting in the expansion of a cell population in the bone marrow.
[ "GOC:mah", "GOC:yaf", "PMID:17063141" ]
null
[ "bone marrow cell proliferation" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0008283" ]
[]
[]
[]
[ "GO:0008283" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-10T12:15:41Z
false
true
7
GO:0071839
71,839
apoptotic process in bone marrow cell
biological_process
The apoptotic process in cells in the bone marrow.
[ "GOC:mah", "GOC:mtg_apoptosis", "PMID:17063141" ]
null
[ "apoptosis in bone marrow", "bone marrow cell apoptosis", "bone marrow cell programmed cell death by apoptosis", "killing of bone marrow cells", "programmed cell death of bone marrow cells by apoptosis", "programmed cell death, bone marrow cells" ]
[ "NARROW", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0006915" ]
[]
[]
[]
[ "GO:0006915" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-10T12:19:18Z
false
true
7
GO:0071840
71,840
cellular component organization or biogenesis
biological_process
A process that results in the biosynthesis of constituent macromolecules, assembly, arrangement of constituent parts, or disassembly of a cellular component.
[ "GOC:mah" ]
Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.
[ "cellular component organisation or biogenesis", "cellular component organisation or biogenesis at cellular level", "cellular component organization or biogenesis at cellular level" ]
[ "EXACT", "EXACT", "EXACT" ]
[ "GO:0071841" ]
[ "gocheck_do_not_annotate", "goslim_flybase_ribbon", "goslim_metagenomics" ]
[]
[ "GO:0009987" ]
[]
[]
[]
[ "GO:0009987" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/27189\" xsd:anyURI" ]
mah
2010-09-10T01:39:16Z
false
true
8
GO:0071846
71,846
actin filament debranching
biological_process
An actin filament severing process that results in the removal of actin filament branches specifically at the branch points.
[ "GOC:jh", "GOC:mah", "PMID:20362448" ]
null
[]
[]
[]
[]
[]
[ "GO:0051014" ]
[]
[]
[]
[ "GO:0051014" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-10T02:15:42Z
false
true
9
GO:0071847
71,847
obsolete TNFSF11-mediated signaling pathway
biological_process
OBSOLETE. The series of molecular signals initiated by the binding of tumor necrosis factor ligand superfamily member 11 (TNFSF11) to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.
[ "GOC:BHF", "GOC:signaling", "PMID:18606301" ]
This term was obsoleted because it represents a specific ligand of the tumor necrosis factor-mediated signaling pathway ; GO:0033209.
[ "RANKL-mediated signaling pathway", "receptor activator of nuclear factor kappa-B ligand signaling pathway", "TNF-related activation-induced cytokine-mediated signaling pathway", "TNFSF11-mediated signalling pathway", "tumor necrosis factor superfamily member 11-mediated signaling pathway" ]
[ "EXACT", "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0033209" ]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/26499\" xsd:anyURI" ]
mah
2010-09-10T02:22:42Z
true
true
2
GO:0071848
71,848
obsolete positive regulation of ERK1 and ERK2 cascade via TNFSF11-mediated signaling
biological_process
OBSOLETE. Any TNFSF11-mediated signaling process that increases the rate, frequency, or extent of the ERK1 and ERK2 cascade.
[ "GOC:BHF", "PMID:18606301" ]
This term was obsoleted because it represents specific steps in the tumor necrosis factor-mediated signaling pathway ; GO:0033209.
[ "positive regulation of ERK1 and ERK2 cascade via RANKL-mediated signaling", "positive regulation of ERK1 and ERK2 cascade via TNFSF11-mediated signalling" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0033209" ]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/26499\" xsd:anyURI" ]
mah
2010-09-10T02:25:31Z
true
true
5
GO:0071849
71,849
obsolete G1 cell cycle arrest in response to nitrogen starvation
biological_process
OBSOLETE. The process in which the cell cycle is halted during G1 phase, as a result of deprivation of nitrogen.
[ "GOC:vw" ]
This term was obsoleted because it does not represent a specific process.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20989\" xsd:anyURI" ]
mah
2010-09-10T02:46:11Z
true
true
4
GO:0071851
71,851
obsolete mitotic G1 cell cycle arrest in response to nitrogen starvation
biological_process
OBSOLETE. The process in which the mitotic cell cycle is halted during G1 phase, as a result of deprivation of nitrogen.
[ "GOC:vw" ]
This term was obsoleted because it does not represent a specific process.
[ "G1 mitotic cell cycle arrest in response to nitrogen starvation" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20989\" xsd:anyURI" ]
mah
2010-09-10T02:58:09Z
true
true
6
GO:0071853
71,853
fungal-type cell wall disassembly
biological_process
A cellular process that results in the breakdown of a fungal-type cell wall.
[ "GOC:mah" ]
null
[]
[]
[]
[]
[]
[ "GO:0031505", "GO:0044277" ]
[]
[]
[]
[ "GO:0031505", "GO:0044277" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-10T03:10:47Z
false
true
3
GO:0071854
71,854
obsolete cell wall macromolecule catabolic process involved in fungal-type cell wall disassembly
biological_process
OBSOLETE. The chemical reactions and pathways that result in the breakdown of macromolecules that form part of a cell wall, and contributes to the breakdown of the fungal-type cell wall.
[ "GOC:mah" ]
This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0016998", "GO:0071853" ]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31254\" xsd:anyURI" ]
mah
2010-09-10T03:12:08Z
true
true
7
GO:0071857
71,857
beta-endorphin receptor binding
molecular_function
Binding to a beta-endorphin receptor.
[ "GOC:kmv", "GOC:mah" ]
null
[]
[]
[]
[]
[]
[ "GO:0071855" ]
[]
[]
[]
[ "GO:0071855" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-10T03:23:01Z
false
true
3
GO:0071858
71,858
corazonin receptor binding
molecular_function
Binding to a corazonin receptor.
[ "GOC:kmv", "GOC:mah" ]
null
[]
[]
[]
[]
[]
[ "GO:0071855" ]
[]
[]
[]
[ "GO:0071855" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-10T03:23:40Z
false
true
1
GO:0071859
71,859
neuropeptide F receptor binding
molecular_function
Binding to a neuropeptide F receptor.
[ "GOC:kmv", "GOC:mah" ]
null
[]
[]
[]
[]
[]
[ "GO:0071855" ]
[]
[]
[]
[ "GO:0071855" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-10T03:23:56Z
false
true
8
GO:0071860
71,860
proctolin receptor binding
molecular_function
Binding to a proctolin receptor.
[ "GOC:kmv", "GOC:mah" ]
null
[]
[]
[]
[]
[]
[ "GO:0071855" ]
[]
[]
[]
[ "GO:0071855" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-10T03:24:19Z
false
true
4
GO:0071861
71,861
tachykinin receptor binding
molecular_function
Binding to a tachykinin receptor.
[ "GOC:kmv", "GOC:mah" ]
null
[]
[]
[]
[]
[]
[ "GO:0071855" ]
[]
[]
[]
[ "GO:0071855" ]
[]
[]
[]
[]
[]
[]
mah
2010-09-10T03:24:34Z
false
true
3
GO:0071863
71,863
regulation of cell proliferation in bone marrow
biological_process
A process that modulates the frequency, rate or extent of cell proliferation in the bone marrow.
[ "GOC:mah", "GOC:yaf", "PMID:17063141" ]
null
[ "regulation of bone marrow cell proliferation" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0042127" ]
[ "regulates GO:0071838" ]
[ "regulates" ]
[ "GO:0071838" ]
[ "GO:0042127", "GO:0071838" ]
[ "GO:0065007", "regulates GO:0071838" ]
[]
[]
[]
[]
[]
mah
2010-09-13T02:11:08Z
false
true
9
GO:0071864
71,864
positive regulation of cell proliferation in bone marrow
biological_process
A process that activates or increases the frequency, rate or extent of cell proliferation in the bone marrow.
[ "GOC:mah", "GOC:yaf", "PMID:17063141" ]
null
[ "activation of cell proliferation in bone marrow", "positive regulation of bone marrow cell proliferation", "stimulation of cell proliferation in bone marrow", "up regulation of cell proliferation in bone marrow", "up-regulation of cell proliferation in bone marrow", "upregulation of cell proliferation in...
[ "NARROW", "EXACT", "NARROW", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0008284", "GO:0071863" ]
[ "positively_regulates GO:0071838" ]
[ "positively_regulates" ]
[ "GO:0071838" ]
[ "GO:0008284", "GO:0071838", "GO:0071863" ]
[ "GO:0065007", "positively_regulates GO:0071838" ]
[]
[]
[]
[]
[]
mah
2010-09-13T02:12:36Z
false
true
9
GO:0071865
71,865
regulation of apoptotic process in bone marrow cell
biological_process
Any process that modulates the occurrence or rate of cell death by apoptotic process in the bone marrow.
[ "GOC:mah", "GOC:mtg_apoptosis", "GOC:yaf", "PMID:17063141" ]
null
[ "regulation of apoptosis in bone marrow", "regulation of apoptotic process in bone marrow" ]
[ "NARROW", "EXACT" ]
[]
[]
[]
[ "GO:0042981" ]
[ "regulates GO:0071839" ]
[ "regulates" ]
[ "GO:0071839" ]
[ "GO:0042981", "GO:0071839" ]
[ "GO:0065007", "regulates GO:0071839" ]
[]
[]
[]
[]
[]
mah
2010-09-13T02:16:43Z
false
true
5