Datasets:
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GO

Dataset card Data Studio Files
xet
 Community
go_id
string
go_numeric_id
int64
name
string
namespace
string
definition
string
definition_xrefs
list
comment
string
synonyms
list
synonym_scopes
list
alt_ids
list
subsets
list
xrefs
list
is_a_ids
list
relationship_edges
list
relationship_types
list
relationship_target_ids
list
parent_ids
list
intersection_of
list
union_of
list
disjoint_from
list
replaced_by
list
consider
list
property_values
list
created_by
string
creation_date
string
is_obsolete
bool
in_go_basic
bool
split_bucket
int64
GO:0086099
86,099
obsolete phospholipase C-activating angiotensin-activated signaling pathway involved in heart process
biological_process
OBSOLETE. An angiotensin-mediated signaling pathway that contributes to a circulatory system process carried out by the heart, where the activated receptor transmits the signal via Gq-mediated activation of phospholipase C (PLC). PLC hydrolyses phosphatidylinositol 4,5-bisphosphate (PIP2) into the second messengers ino...
[ "GOC:BHF", "GOC:mtg_cardiac_conduct_nov11", "PMID:17376402" ]
This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
[ "angiotensin receptor signaling pathway via activation of phospholipase C involved in heart process", "cardiac angiotensin receptor signaling pathway via activation of PLC", "Gq-coupled angiotensin receptor signaling pathway involved in heart process", "phospholipase C-activating angiotensin-mediated signalin...
[ "EXACT", "EXACT", "EXACT", "RELATED", "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0003015", "GO:0086097" ]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31254\" xsd:anyURI" ]
bf
null
true
true
8
GO:0086100
86,100
endothelin receptor signaling pathway
biological_process
A G protein-coupled receptor signaling pathway initiated by endothelin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.
[ "GOC:bf", "GOC:BHF", "GOC:mtg_cardiac_conduct_nov11", "PMID:10977869" ]
null
[ "endothelin signaling pathway" ]
[ "RELATED" ]
[]
[]
[]
[ "GO:0007186" ]
[]
[]
[]
[ "GO:0007186" ]
[]
[]
[]
[]
[]
[]
bf
null
false
true
2
GO:0086101
86,101
endothelin receptor signaling pathway involved in heart process
biological_process
An endothelin receptor signaling pathway which contributes to a circulatory system process carried out by the heart.
[ "GOC:BHF", "GOC:mtg_cardiac_conduct_nov11", "PMID:17376402" ]
null
[ "endothelin receptor signalling pathway involved in heart process" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0086100", "GO:0086103" ]
[]
[]
[]
[ "GO:0086100", "GO:0086103" ]
[ "GO:0086100", "part_of GO:0003015" ]
[]
[]
[]
[]
[]
bf
null
false
true
5
GO:0086102
86,102
obsolete adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway involved in negative regulation of heart rate
biological_process
OBSOLETE. An adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway that contributes to a decrease in frequency or rate of heart contraction through inhibition of adenylate cyclase (AC) activity. Binding of acetylcholine to a G protein-coupled (muscarinic) receptor on the surface of the...
[ "GOC:BHF", "GOC:mtg_cardiac_conduct_nov11" ]
This term was obsoleted because it represents a GO-CAM pathway.
[ "AC-inhibiting muscarinic receptor signaling pathway involved in negative regulation of heart rate", "adenylate cyclase-inhibiting G-protein coupled acetylcholine receptor signaling pathway involved in negative regulation of heart rate", "G-protein coupled acetylcholine receptor signaling pathway involved in ne...
[ "RELATED", "EXACT", "EXACT", "BROAD", "EXACT", "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0031635" ]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/25766\" xsd:anyURI" ]
bf
null
true
true
1
GO:0086103
86,103
G protein-coupled receptor signaling pathway involved in heart process
biological_process
An G protein-coupled receptor signaling pathway which contributes to a circulatory system process carried out by the heart.
[ "GOC:BHF", "GOC:mtg_cardiac_conduct_nov11", "PMID:17376402" ]
null
[ "G-protein coupled receptor signaling pathway involved in heart process", "G-protein coupled receptor signalling pathway involved in heart process", "GPCR signaling pathway involved in cardiac process", "GPCR signaling pathway involved in heart process" ]
[ "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0007186" ]
[ "part_of GO:0003015" ]
[ "part_of" ]
[ "GO:0003015" ]
[ "GO:0003015", "GO:0007186" ]
[ "GO:0007186", "part_of GO:0003015" ]
[]
[]
[]
[]
[]
bf
2012-03-19T01:28:23Z
false
true
5
GO:0089700
89,700
obsolete protein kinase D signaling
biological_process
OBSOLETE. A series of reactions, mediated by the intracellular serine/threonine kinase protein kinase D, which occurs as a result of a single trigger reaction or compound.
[ "GOC:BHF", "GOC:dos", "GOC:mah" ]
This term was obsoleted because protein kinase D activity is part of other signaling pathways, it is not itself a signaling pathway.
[ "PKD signal transduction", "PKD signaling cascade", "protein kinase D signal transduction", "protein kinase D signaling cascade", "protein kinase D signalling cascade" ]
[ "EXACT", "RELATED", "EXACT", "RELATED", "RELATED" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/26299\" xsd:anyURI" ]
null
null
true
true
3
GO:0089701
89,701
U2AF complex
cellular_component
A heterodimeric protein complex consisting of conserved large and small U2AF subunits that contributes to spliceosomal RNA splicing by binding to consensus sequences at the 3' splice site. U2AF is required to stabilize the association of the U2 snRNP with the branch point.
[ "GOC:dos", "GOC:mah", "PMID:15231733", "PMID:1538748", "PMID:2963698", "PMID:8657565" ]
null
[ "U2 accessory factor", "U2AF" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0140513" ]
[]
[]
[]
[ "GO:0140513" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
9
GO:0089702
89,702
undecaprenyl-phosphate glucose phosphotransferase activity
molecular_function
Catalysis of the reaction: di-trans,octa-cis-undecaprenyl phosphate + UDP-alpha-D-glucose = alpha-D-glucosyl di-trans,octa-cis-undecaprenyl diphosphate + UMP.
[ "RHEA:28126" ]
null
[]
[]
[]
[]
[ "EC:2.7.8.31", "RHEA:28126" ]
[ "GO:0016780" ]
[]
[]
[]
[ "GO:0016780" ]
[]
[]
[]
[]
[]
[ "skos:exactMatch EC:2.7.8.31", "skos:exactMatch RHEA:28126", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/28324\" xsd:anyURI" ]
null
null
false
true
1
GO:0089703
89,703
L-aspartate transmembrane export from vacuole
biological_process
The directed movement of L-aspartate out of the vacuole, across the vacuolar membrane.
[ "PMID:21307582" ]
null
[]
[]
[]
[]
[]
[ "GO:0010496", "GO:0034486", "GO:0034487", "GO:0070778" ]
[]
[]
[]
[ "GO:0010496", "GO:0034486", "GO:0034487", "GO:0070778" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
4
GO:0089704
89,704
L-glutamate transmembrane export from vacuole
biological_process
The directed movement of L-glutamate out of the vacuole, across the vacuolar membrane.
[ "PMID:21307582" ]
null
[]
[]
[]
[]
[]
[ "GO:0015813", "GO:0032974" ]
[]
[]
[]
[ "GO:0015813", "GO:0032974" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
4
GO:0089705
89,705
protein localization to outer membrane
biological_process
A process in which a protein is transported to, or maintained in, a specific location the cell outer membrane.
[ "GOC:dos", "PMID:12823819" ]
null
[]
[]
[]
[]
[]
[ "GO:0071692", "GO:0072657" ]
[]
[]
[]
[ "GO:0071692", "GO:0072657" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
8
GO:0089706
89,706
L-ornithine transmembrane export from vacuole
biological_process
The directed movement of L-ornithine out of the vacuole, across the vacuolar membrane.
[ "PMID:21307582" ]
null
[]
[]
[]
[]
[]
[ "GO:0032974", "GO:1903352" ]
[]
[]
[]
[ "GO:0032974", "GO:1903352" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
3
GO:0089707
89,707
L-lysine transmembrane export from vacuole
biological_process
The directed movement of L-lysine out of the vacuole, across the vacuolar membrane.
[ "PMID:21307582" ]
null
[]
[]
[]
[]
[]
[ "GO:0032974", "GO:1903401" ]
[]
[]
[]
[ "GO:0032974", "GO:1903401" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
9
GO:0089708
89,708
L-histidine transmembrane export from vacuole
biological_process
The directed movement of L-histidine out of the vacuole, across the vacuolar membrane.
[ "PMID:21307582" ]
null
[]
[]
[]
[]
[]
[ "GO:0032974", "GO:0089709", "GO:1902024", "GO:1990822" ]
[]
[]
[]
[ "GO:0032974", "GO:0089709", "GO:1902024", "GO:1990822" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
1
GO:0089709
89,709
L-histidine transmembrane transport
biological_process
The directed movement of L-histidine across a membrane.
[ "PMID:21307582" ]
null
[]
[]
[]
[]
[]
[ "GO:0015695", "GO:0015801", "GO:0045117", "GO:1902475" ]
[]
[]
[]
[ "GO:0015695", "GO:0015801", "GO:0045117", "GO:1902475" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
9
GO:0089710
89,710
endocytic targeting sequence binding
molecular_function
Binding to a endocytic signal sequence, a specific peptide sequence, of 4-6 amino acids with an essential tyrosine (Y), found on cytoplasmic tails of some cell surface membrane proteins, which directs internalization by clathrin-coated pits.
[ "PMID:8918456" ]
null
[]
[]
[]
[]
[]
[ "GO:0005515" ]
[]
[]
[]
[ "GO:0005515" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
8
GO:0089713
89,713
Cbf1-Met4-Met28 complex
cellular_component
A heteromeric complex consisting of Cbf1 and basic leucine zipper (bZIP) containing transcriptional activators, Met4 and Met28, that forms over the sequence TCACGTG in the upstream activating sequence (UAS) of genes involved in sulfur amino acid metabolism, resulting in their transcriptional activation.
[ "PMID:8665859", "PMID:9171357" ]
null
[]
[]
[]
[]
[]
[ "GO:0005667" ]
[]
[]
[]
[ "GO:0005667" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
2
GO:0089714
89,714
UDP-N-acetyl-D-mannosamine dehydrogenase activity
molecular_function
Catalysis of the reaction: UDP-N-acetyl-alpha-D-mannosamine + 2 NAD+ + H2O = UDP-N-acetyl-alpha-D-mannosaminuronate + 2 NADH + 2 H+.
[ "EC:1.1.1.336" ]
null
[]
[]
[]
[]
[ "EC:1.1.1.336", "RHEA:25780" ]
[ "GO:0016616" ]
[]
[]
[]
[ "GO:0016616" ]
[]
[]
[]
[]
[]
[ "skos:exactMatch EC:1.1.1.336", "skos:exactMatch RHEA:25780", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30193\" xsd:anyURI" ]
null
null
false
true
3
GO:0089715
89,715
tRNA (L-threonylcarbamoyladenosine(37)-C2) methyltransferase activity
molecular_function
Catalysis of the reaction: S-adenosyl-L-methionine + tRNA containing N6-threonylcarbamoyladenosine at position 37 = S-adenosyl-L-homocysteine + tRNA containing N6-methylthreonylcarbamoyladenosine at position 37.
[ "PMID:25063302", "RHEA:70027" ]
This activity is distinct from tRNA (adenine(37)-C2-)-methyltransferase activity (GO:0002935) in that it requires the presence of a threonylcarbamoyl modification.
[ "tRNA (L-threonylcarbamoyladenosine(37)-C(2)) methyltransferase activity", "tRNA (L-threonylcarbamoyladenosine37-C2-) methyltransferase activity", "tRNA m6t6A37 methyltransferase activity" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[ "MetaCyc:RXN0-7114", "RHEA:70027" ]
[ "GO:0016426" ]
[]
[]
[]
[ "GO:0016426" ]
[]
[]
[]
[]
[]
[ "skos:exactMatch RHEA:70027", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/25829\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30193\" xsd:anyURI" ]
null
null
false
true
7
GO:0089716
89,716
Pip2-Oaf1 complex
cellular_component
A heterodimeric complex consisting of Zn(2)Cys(6) containing transcription factors Pip2 and Oaf1. It binds to the oleate response element (ORE), found in the promoters of fatty acid-inducible genes in Saccharomyces where, in the presence of oleate this bound complex activates the transcription of genes encoding peroxis...
[ "PMID:8972187", "PMID:9288897" ]
null
[]
[]
[]
[]
[]
[ "GO:0090575" ]
[]
[]
[]
[ "GO:0090575" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
9
GO:0089718
89,718
amino acid import across plasma membrane
biological_process
The directed movement of an amino acid from outside of a cell, across the plasma membrane and into the cytosol.
[ "GOC:krc", "PMID:8195186" ]
null
[ "amino acid import into cell", "amino acid transmembrane import", "L-amino acid import", "L-amino acid uptake" ]
[ "EXACT", "BROAD", "BROAD", "NARROW" ]
[ "GO:0043092", "GO:0044745", "GO:1902837" ]
[]
[]
[ "GO:0003333", "GO:0098739" ]
[]
[]
[]
[ "GO:0003333", "GO:0098739" ]
[]
[]
[]
[]
[]
[]
jl
2012-11-14T14:21:41Z
false
true
3
GO:0089719
89,719
RHG protein domain binding
molecular_function
Binding to an RHG (reaper/hid/grimm) domain/motif (AKA iap binding motif).
[ "GOC:dos", "GOC:ha" ]
null
[ "iap binding domain binding", "inhibitor of apoptosis binding domain binding", "reaper hid grim domain binding", "RHG domain binding" ]
[ "EXACT", "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0005515" ]
[]
[]
[]
[ "GO:0005515" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
4
GO:0089720
89,720
caspase binding
molecular_function
Binding to a caspase family protein.
[ "GOC:dos", "GOC:ha" ]
null
[]
[]
[]
[]
[]
[ "GO:0002020" ]
[]
[]
[]
[ "GO:0002020" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
7
GO:0089722
89,722
phosphoenolpyruvate transmembrane transport
biological_process
The directed movement of phosphoenolpytuvate across a membrane.
[ "GOC:dos" ]
null
[]
[]
[]
[]
[]
[ "GO:0015714", "GO:1905039" ]
[]
[]
[]
[ "GO:0015714", "GO:1905039" ]
[]
[]
[]
[]
[]
[]
null
null
false
true
3
GO:0090001
90,001
replication fork arrest at tRNA locus
biological_process
A process that impedes the progress of the DNA replication fork at natural replication fork pausing sites within the eukaryotic tRNA transcription unit.
[ "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0043111" ]
[]
[]
[]
[ "GO:0043111" ]
[]
[]
[]
[]
[]
[]
tb
2009-06-24T11:36:15Z
false
true
8
GO:0090006
90,006
regulation of linear element assembly
biological_process
Any process that modulates the rate, frequency or extent of linear element assembly. Linear element assembly is the cell cycle process in which a proteinaceous scaffold, related to the synaptonemal complex, is assembled in association with S. pombe chromosomes during meiotic prophase.
[ "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0044087", "GO:0051128", "GO:0060629" ]
[ "regulates GO:0030999" ]
[ "regulates" ]
[ "GO:0030999" ]
[ "GO:0030999", "GO:0044087", "GO:0051128", "GO:0060629" ]
[ "GO:0065007", "regulates GO:0030999" ]
[]
[]
[]
[]
[]
tb
2009-07-17T01:05:13Z
false
true
8
GO:0090007
90,007
obsolete regulation of mitotic anaphase
biological_process
OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic anaphase, a cell cycle process comprising the steps by which a cell progresses through anaphase, the stage of mitosis during which the two sets of chromosomes separate and move away from each other.
[ "GOC:tb" ]
This term was made obsolete as part of the cell cycle overhaul. This is because it was decided that cell cycle phases are intervals and so cannot be regulated, rather it is the transitions between the phases that are regulated.
[ "regulation of mitotic anaphase" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
tb
2009-07-17T01:08:58Z
true
true
3
GO:0090008
90,008
hypoblast development
biological_process
The process whose specific outcome is the progression of the hypoblast over time, from its formation to the mature structure. The hypoblast is a tissue formed from the inner cell mass that lies beneath the epiblast.
[ "GOC:dph", "GOC:sdb_2009", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0009888" ]
[]
[]
[]
[ "GO:0009888" ]
[]
[]
[]
[]
[]
[]
tb
2009-07-29T10:25:54Z
false
true
2
GO:0090009
90,009
primitive streak formation
biological_process
The developmental process pertaining to the initial formation of the primitive streak from unspecified parts. The primitive streak is a ridge of cells running along the midline of the embryo where the mesoderm ingresses. It defines the anterior-posterior axis.
[ "GOC:dph", "GOC:sdb_2009", "GOC:tb" ]
null
[]
[]
[]
[]
[ "Reactome:R-HSA-9754189 \"Germ layer formation at gastrulation\"" ]
[ "GO:0048646" ]
[ "part_of GO:0001702", "part_of GO:0009948" ]
[ "part_of", "part_of" ]
[ "GO:0001702", "GO:0009948" ]
[ "GO:0001702", "GO:0009948", "GO:0048646" ]
[]
[]
[]
[]
[]
[]
tb
2009-07-29T10:31:31Z
false
true
2
GO:0090010
90,010
obsolete transforming growth factor beta receptor signaling pathway involved in primitive streak formation
biological_process
OBSOLETE. The series of molecular signals initiated by an extracellular ligand binding to a transforming growth factor beta receptor on the surface of a target cell, which contributes to the formation of the primitive streak.
[ "GOC:dph", "GOC:sdb_2009", "GOC:tb" ]
This term was obsoleted because it represents a GO-CAM model.
[ "TGFbeta signaling pathway involved in primitive streak formation", "transforming growth factor beta receptor signalling pathway involved in primitive streak formation" ]
[ "RELATED", "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0007179" ]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/25534\" xsd:anyURI" ]
tb
2009-07-29T10:38:40Z
true
true
8
GO:0090011
90,011
obsolete Wnt signaling pathway involved in primitive streak formation
biological_process
OBSOLETE. The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in transcription of target genes that contribute to the formation of the primitive streak.
[ "GOC:dph", "GOC:sdb_2009", "GOC:tb" ]
This term was obsoleted because it represents a GO-CAM model.
[ "Wnt receptor signaling pathway involved in primitive streak formation", "Wnt receptor signalling pathway involved in primitive streak formation", "Wnt-activated signaling pathway involved in primitive streak formation" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0016055", "GO:0090009" ]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/25766\" xsd:anyURI" ]
tb
2009-07-29T10:44:53Z
true
true
9
GO:0090012
90,012
obsolete negative regulation of transforming growth factor beta receptor signaling pathway involved in primitive streak formation
biological_process
OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of any TGF-beta receptor signaling pathway that contributes to the formation of the primitive streak.
[ "GOC:dph", "GOC:sdb_2009", "GOC:tb" ]
This term was obsoleted because it represents a GO-CAM model.
[ "negative regulation of transforming growth factor beta receptor signalling pathway involved in primitive streak formation" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0007179" ]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/25534\" xsd:anyURI" ]
tb
2009-07-29T10:51:57Z
true
true
7
GO:0090013
90,013
obsolete regulation of transforming growth factor beta receptor signaling pathway involved in primitive streak formation
biological_process
OBSOLETE. Any process that modulates the frequency, rate or extent of any TGF-beta receptor signaling pathway that contributes to the formation of the primitive streak.
[ "GOC:dph", "GOC:sdb_2009", "GOC:tb" ]
This term was obsoleted because it represents a GO-CAM model.
[ "regulation of transforming growth factor beta receptor signalling pathway involved in primitive streak formation" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0007179" ]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/25534\" xsd:anyURI" ]
tb
2009-07-29T10:54:44Z
true
true
6
GO:0090014
90,014
leaflet formation
biological_process
The developmental process pertaining to the initial formation of a leaflet from unspecified parts. A leaflet is one of the ultimate segments of a compound leaf.
[ "GOC:dph", "GOC:sdb_2009", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0048646" ]
[ "part_of GO:0060794" ]
[ "part_of" ]
[ "GO:0060794" ]
[ "GO:0048646", "GO:0060794" ]
[]
[]
[]
[]
[]
[]
tb
2009-07-29T11:05:37Z
false
true
8
GO:0090018
90,018
posterior neural plate formation
biological_process
The formation of posterior end of the flat, thickened layer of ectodermal cells known as the neural plate.
[ "GOC:dph", "GOC:sdb_2009", "GOC:tb" ]
null
[]
[]
[]
[]
[ "Reactome:R-HSA-9832991 \"Formation of the posterior neural plate\"" ]
[ "GO:0048646" ]
[ "part_of GO:0021990" ]
[ "part_of" ]
[ "GO:0021990" ]
[ "GO:0021990", "GO:0048646" ]
[]
[]
[]
[]
[]
[]
tb
2009-07-29T11:32:08Z
false
true
8
GO:0090019
90,019
obsolete regulation of transcription involved in anterior neural plate formation
biological_process
OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter contributing to the formation of the anterior neural plate.
[ "GOC:dph", "GOC:sdb_2009", "GOC:tb" ]
This term was obsoleted because it represents a GO-CAM model.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0006357", "GO:0090017" ]
[]
tb
2009-07-29T11:38:28Z
true
true
1
GO:0090020
90,020
obsolete regulation of transcription involved in posterior neural plate formation
biological_process
OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter contributing to the formation of the posterior neural plate.
[ "GOC:dph", "GOC:sdb_2009", "GOC:tb" ]
This term was obsoleted because it represents a GO-CAM model.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0006357", "GO:0090018" ]
[]
tb
2009-07-29T11:39:29Z
true
true
7
GO:0090021
90,021
obsolete positive regulation of posterior neural plate formation by Wnt signaling pathway
biological_process
OBSOLETE. The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and increasing the rate or extent of posterior neural plate formation.
[ "GOC:dph", "GOC:sdb_2009", "GOC:tb" ]
This term was obsoleted because it represents a GO-CAM model.
[ "positive regulation of posterior neural plate formation by Wnt receptor signaling pathway", "positive regulation of posterior neural plate formation by Wnt receptor signalling pathway", "positive regulation of posterior neural plate formation by Wnt-activated signaling pathway" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0016055", "GO:0021990" ]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/25766\" xsd:anyURI" ]
tb
2009-07-29T11:44:13Z
true
true
4
GO:0090022
90,022
regulation of neutrophil chemotaxis
biological_process
Any process that modulates the frequency, rate, or extent of neutrophil chemotaxis. Neutrophil chemotaxis is the directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding.
[ "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0071622", "GO:1902622" ]
[ "regulates GO:0030593" ]
[ "regulates" ]
[ "GO:0030593" ]
[ "GO:0030593", "GO:0071622", "GO:1902622" ]
[ "GO:0065007", "regulates GO:0030593" ]
[]
[]
[]
[]
[]
tb
2009-08-03T10:09:34Z
false
true
7
GO:0090023
90,023
positive regulation of neutrophil chemotaxis
biological_process
Any process that increases the frequency, rate, or extent of neutrophil chemotaxis. Neutrophil chemotaxis is the directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding.
[ "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0071624", "GO:0090022", "GO:1902624" ]
[ "positively_regulates GO:0030593" ]
[ "positively_regulates" ]
[ "GO:0030593" ]
[ "GO:0030593", "GO:0071624", "GO:0090022", "GO:1902624" ]
[ "GO:0065007", "positively_regulates GO:0030593" ]
[]
[]
[]
[]
[]
tb
2009-08-03T10:12:23Z
false
true
9
GO:0090024
90,024
negative regulation of neutrophil chemotaxis
biological_process
Any process that decreases the frequency, rate, or extent of neutrophil chemotaxis. Neutrophil chemotaxis is the directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding.
[ "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0071623", "GO:0090022", "GO:1902623" ]
[ "negatively_regulates GO:0030593" ]
[ "negatively_regulates" ]
[ "GO:0030593" ]
[ "GO:0030593", "GO:0071623", "GO:0090022", "GO:1902623" ]
[ "GO:0065007", "negatively_regulates GO:0030593" ]
[]
[]
[]
[]
[]
tb
2009-08-03T10:13:09Z
false
true
3
GO:0090025
90,025
regulation of monocyte chemotaxis
biological_process
Any process that modulates the frequency, rate, or extent of monocyte chemotaxis.
[ "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0002688", "GO:0071675" ]
[ "regulates GO:0002548" ]
[ "regulates" ]
[ "GO:0002548" ]
[ "GO:0002548", "GO:0002688", "GO:0071675" ]
[ "GO:0065007", "regulates GO:0002548" ]
[]
[]
[]
[]
[]
tb
2009-08-03T10:17:03Z
false
true
2
GO:0090026
90,026
positive regulation of monocyte chemotaxis
biological_process
Any process that increases the frequency, rate, or extent of monocyte chemotaxis.
[ "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0002690", "GO:0071677", "GO:0090025" ]
[ "positively_regulates GO:0002548" ]
[ "positively_regulates" ]
[ "GO:0002548" ]
[ "GO:0002548", "GO:0002690", "GO:0071677", "GO:0090025" ]
[ "GO:0065007", "positively_regulates GO:0002548" ]
[]
[]
[]
[]
[]
tb
2009-08-03T10:18:54Z
false
true
3
GO:0090027
90,027
negative regulation of monocyte chemotaxis
biological_process
Any process that decreases the frequency, rate, or extent of monocyte chemotaxis.
[ "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0002689", "GO:0071676", "GO:0090025" ]
[ "negatively_regulates GO:0002548" ]
[ "negatively_regulates" ]
[ "GO:0002548" ]
[ "GO:0002548", "GO:0002689", "GO:0071676", "GO:0090025" ]
[ "GO:0065007", "negatively_regulates GO:0002548" ]
[]
[]
[]
[]
[]
tb
2009-08-03T10:19:40Z
false
true
9
GO:0090028
90,028
obsolete positive regulation of pheromone-dependent signal transduction involved in conjugation with cellular fusion
biological_process
OBSOLETE. Any process that increases the frequency, rate or extent of pheromone-dependent signal transduction during conjugation with cellular fusion, a signal transduction process resulting in the relay, amplification or dampening of a signal generated in response to pheromone exposure in organisms that undergo conjug...
[ "GOC:dph", "GOC:tb" ]
This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31306\" xsd:anyURI" ]
tb
2009-08-03T10:25:27Z
true
true
1
GO:0090029
90,029
negative regulation of pheromone-dependent signal transduction involved in conjugation with cellular fusion
biological_process
Any process that decreases the frequency, rate or extent of pheromone-dependent signal transduction during conjugation with cellular fusion, a signal transduction process resulting in the relay, amplification or dampening of a signal generated in response to pheromone exposure in organisms that undergo conjugation with...
[ "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0009968", "GO:0010969" ]
[ "negatively_regulates GO:0000750" ]
[ "negatively_regulates" ]
[ "GO:0000750" ]
[ "GO:0000750", "GO:0009968", "GO:0010969" ]
[ "GO:0065007", "negatively_regulates GO:0000750" ]
[]
[]
[]
[]
[]
tb
2009-08-03T10:27:04Z
false
true
4
GO:0090030
90,030
regulation of steroid hormone biosynthetic process
biological_process
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroid hormones,compounds with a 1, 2, cyclopentanoperhydrophenanthrene nucleus that act as hormones.
[ "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0046885", "GO:0050810" ]
[]
[]
[]
[ "GO:0046885", "GO:0050810" ]
[]
[]
[]
[]
[]
[]
tb
2009-08-03T10:38:27Z
false
true
9
GO:0090031
90,031
positive regulation of steroid hormone biosynthetic process
biological_process
Any process that increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroid hormones,compounds with a 1, 2, cyclopentanoperhydrophenanthrene nucleus that act as hormones.
[ "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0010893", "GO:0046886", "GO:0090030" ]
[]
[]
[]
[ "GO:0010893", "GO:0046886", "GO:0090030" ]
[]
[]
[]
[]
[]
[]
tb
2009-08-03T10:40:32Z
false
true
9
GO:0090032
90,032
negative regulation of steroid hormone biosynthetic process
biological_process
Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroid hormones,compounds with a 1, 2, cyclopentanoperhydrophenanthrene nucleus that act as hormones.
[ "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0010894", "GO:0032353", "GO:0090030" ]
[]
[]
[]
[ "GO:0010894", "GO:0032353", "GO:0090030" ]
[]
[]
[]
[]
[]
[]
tb
2009-08-03T10:41:35Z
false
true
4
GO:0090033
90,033
positive regulation of filamentous growth
biological_process
Any process that increases the frequency, rate or extent of the process in which a multicellular organism or a group of unicellular organisms grow in a threadlike, filamentous shape.
[ "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0010570", "GO:0045927" ]
[ "positively_regulates GO:0030447" ]
[ "positively_regulates" ]
[ "GO:0030447" ]
[ "GO:0010570", "GO:0030447", "GO:0045927" ]
[ "GO:0065007", "positively_regulates GO:0030447" ]
[]
[]
[]
[]
[]
tb
2009-08-03T11:04:21Z
false
true
6
GO:0090034
90,034
regulation of chaperone-mediated protein complex assembly
biological_process
Any process that modulates the frequency, rate, or extent of chaperone-mediated protein complex assembly. Chaperone-mediated protein complex assembly is the aggregation, arrangement and bonding together of a set of components to form a protein complex, mediated by chaperone molecules that do not form part of the finish...
[ "GOC:BHF", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0043254" ]
[ "regulates GO:0051131" ]
[ "regulates" ]
[ "GO:0051131" ]
[ "GO:0043254", "GO:0051131" ]
[ "GO:0065007", "regulates GO:0051131" ]
[]
[]
[]
[]
[]
tb
2009-08-03T11:12:37Z
false
true
3
GO:0090035
90,035
positive regulation of chaperone-mediated protein complex assembly
biological_process
Any process that increases the frequency, rate, or extent of chaperone-mediated protein complex assembly. Chaperone-mediated protein complex assembly is the aggregation, arrangement and bonding together of a set of components to form a protein complex, mediated by chaperone molecules that do not form part of the finish...
[ "GOC:BHF", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0031334", "GO:0090034" ]
[ "positively_regulates GO:0051131" ]
[ "positively_regulates" ]
[ "GO:0051131" ]
[ "GO:0031334", "GO:0051131", "GO:0090034" ]
[ "GO:0065007", "positively_regulates GO:0051131" ]
[]
[]
[]
[]
[]
tb
2009-08-03T11:15:25Z
false
true
4
GO:0090036
90,036
regulation of protein kinase C signaling
biological_process
Any process that modulates the frequency, rate, or extent of a series of reactions, mediated by the intracellular serine/threonine kinase protein kinase C, which occurs as a result of a single trigger reaction or compound.
[ "GOC:dph", "GOC:tb" ]
null
[ "regulation of protein kinase C signaling cascade", "regulation of protein kinase C signalling cascade" ]
[ "RELATED", "RELATED" ]
[]
[]
[]
[ "GO:1902531" ]
[ "regulates GO:0070528" ]
[ "regulates" ]
[ "GO:0070528" ]
[ "GO:0070528", "GO:1902531" ]
[ "GO:0065007", "regulates GO:0070528" ]
[]
[]
[]
[]
[]
tb
2009-08-03T11:27:26Z
false
true
6
GO:0090037
90,037
positive regulation of protein kinase C signaling
biological_process
Any process that increases the frequency, rate, or extent of a series of reactions, mediated by the intracellular serine/threonine kinase protein kinase C, which occurs as a result of a single trigger reaction or compound.
[ "GOC:dph", "GOC:tb" ]
null
[ "positive regulation of protein kinase C signaling cascade", "positive regulation of protein kinase C signalling cascade" ]
[ "RELATED", "EXACT" ]
[]
[]
[]
[ "GO:0090036", "GO:1902533" ]
[ "positively_regulates GO:0070528" ]
[ "positively_regulates" ]
[ "GO:0070528" ]
[ "GO:0070528", "GO:0090036", "GO:1902533" ]
[ "GO:0065007", "positively_regulates GO:0070528" ]
[]
[]
[]
[]
[]
tb
2009-08-03T11:28:44Z
false
true
2
GO:0090038
90,038
negative regulation of protein kinase C signaling
biological_process
Any process that decreases the frequency, rate, or extent of a series of reactions, mediated by the intracellular serine/threonine kinase protein kinase C, which occurs as a result of a single trigger reaction or compound.
[ "GOC:dph", "GOC:tb" ]
null
[ "negative regulation of protein kinase C signaling cascade", "negative regulation of protein kinase C signalling cascade" ]
[ "RELATED", "RELATED" ]
[]
[]
[]
[ "GO:0090036", "GO:1902532" ]
[ "negatively_regulates GO:0070528" ]
[ "negatively_regulates" ]
[ "GO:0070528" ]
[ "GO:0070528", "GO:0090036", "GO:1902532" ]
[ "GO:0065007", "negatively_regulates GO:0070528" ]
[]
[]
[]
[]
[]
tb
2009-08-03T11:29:33Z
false
true
9
GO:0090042
90,042
tubulin deacetylation
biological_process
The removal of an acetyl group from tubulin. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid.
[ "GOC:BHF", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[ "gocheck_obsoletion_candidate" ]
[]
[ "GO:0006476" ]
[]
[]
[]
[ "GO:0006476" ]
[]
[]
[]
[]
[]
[]
tb
2009-08-03T11:50:47Z
false
true
2
GO:0090043
90,043
regulation of tubulin deacetylation
biological_process
Any process that modulates the frequency, rate or extent of tubulin deacetylation. Tubulin deacetylation is the removal of an acetyl group from a protein amino acid.
[ "GOC:BHF", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[ "gocheck_obsoletion_candidate" ]
[]
[ "GO:0090311" ]
[ "regulates GO:0090042" ]
[ "regulates" ]
[ "GO:0090042" ]
[ "GO:0090042", "GO:0090311" ]
[ "GO:0065007", "regulates GO:0090042" ]
[]
[]
[]
[]
[]
tb
2009-08-03T11:53:07Z
false
true
8
GO:0090044
90,044
positive regulation of tubulin deacetylation
biological_process
Any process that increases the frequency, rate or extent of tubulin deacetylation. Tubulin deacetylation is the removal of an acetyl group from a protein amino acid.
[ "GOC:BHF", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[ "gocheck_obsoletion_candidate" ]
[]
[ "GO:0090043", "GO:0090312" ]
[ "positively_regulates GO:0090042" ]
[ "positively_regulates" ]
[ "GO:0090042" ]
[ "GO:0090042", "GO:0090043", "GO:0090312" ]
[ "GO:0065007", "positively_regulates GO:0090042" ]
[]
[]
[]
[]
[]
tb
2009-08-03T11:54:18Z
false
true
7
GO:0090045
90,045
positive regulation of deacetylase activity
biological_process
Any process that activates or increases the frequency, rate or extent of deacetylase activity, the catalysis of the hydrolysis of an acetyl group or groups from a substrate molecule.
[ "GOC:BHF", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[ "gocheck_obsoletion_candidate" ]
[]
[ "GO:0043085", "GO:0150065" ]
[ "positively_regulates GO:0019213" ]
[ "positively_regulates" ]
[ "GO:0019213" ]
[ "GO:0019213", "GO:0043085", "GO:0150065" ]
[ "GO:0065007", "positively_regulates GO:0019213" ]
[]
[]
[]
[]
[]
tb
2009-08-03T12:00:14Z
false
true
4
GO:0090046
90,046
obsolete regulation of transcription regulator activity
biological_process
OBSOLETE. Any process that modulates the frequency, rate or extent of transcription regulator activity, any molecular function that plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor.
[ "GOC:BHF", "GOC:rl" ]
At the time of obsoletion, under "regulation of molecular function", a term exists for "regulation of sequence-specific DNA-binding transcription factor activity" and the positive and negative child terms, but no more detailed terms exist. In reannotating, please consider if the paper would support annotation to a regu...
[ "regulation of transcription regulator activity" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
tb
2009-08-07T10:19:57Z
true
true
5
GO:0090047
90,047
obsolete positive regulation of transcription regulator activity
biological_process
OBSOLETE. Any process that increases the frequency, rate or extent of transcription regulator activity, any molecular function that plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor.
[ "GOC:BHF", "GOC:rl" ]
At the time of obsoletion, under "regulation of molecular function", a term exists for "regulation of sequence-specific DNA-binding transcription factor activity" and the positive and negative child terms, but no more detailed terms exist. In reannotating, please consider if the paper would support annotation to a regu...
[ "positive regulation of transcription regulator activity" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
tb
2009-08-07T10:24:24Z
true
true
3
GO:0090048
90,048
obsolete negative regulation of transcription regulator activity
biological_process
OBSOLETE. Any process that decreases the frequency, rate or extent of transcription regulator activity, any molecular function that plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor.
[ "GOC:BHF", "GOC:rl" ]
At the time of obsoletion, under "regulation of molecular function", a term exists for "regulation of sequence-specific DNA-binding transcription factor activity" and the positive and negative child terms, but no more detailed terms exist. In reannotating, please consider if the paper would support annotation to a regu...
[ "negative regulation of transcription regulator activity" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
tb
2009-08-07T10:25:04Z
true
true
2
GO:0090049
90,049
regulation of cell migration involved in sprouting angiogenesis
biological_process
Any process that modulates the frequency, rate or extent of cell migration involved in sprouting angiogenesis. Cell migration involved in sprouting angiogenesis is the orderly movement of endothelial cells into the extracellular matrix in order to form new blood vessels contributing to the process of sprouting angiogen...
[ "GOC:BHF", "GOC:dph", "GOC:rl", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0043535" ]
[ "regulates GO:0002042" ]
[ "regulates" ]
[ "GO:0002042" ]
[ "GO:0002042", "GO:0043535" ]
[ "GO:0065007", "regulates GO:0002042" ]
[]
[]
[]
[]
[]
tb
2009-08-07T10:37:16Z
false
true
2
GO:0090050
90,050
positive regulation of cell migration involved in sprouting angiogenesis
biological_process
Any process that increases the frequency, rate or extent of cell migration involved in sprouting angiogenesis. Cell migration involved in sprouting angiogenesis is the orderly movement of endothelial cells into the extracellular matrix in order to form new blood vessels contributing to the process of sprouting angiogen...
[ "GOC:BHF", "GOC:dph", "GOC:rl", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0043536", "GO:0090049" ]
[ "positively_regulates GO:0002042" ]
[ "positively_regulates" ]
[ "GO:0002042" ]
[ "GO:0002042", "GO:0043536", "GO:0090049" ]
[ "GO:0065007", "positively_regulates GO:0002042" ]
[]
[]
[]
[]
[]
tb
2009-08-07T10:41:09Z
false
true
9
GO:0090051
90,051
negative regulation of cell migration involved in sprouting angiogenesis
biological_process
Any process that decreases the frequency, rate or extent of cell migration involved in sprouting angiogenesis. Cell migration involved in sprouting angiogenesis is the orderly movement of endothelial cells into the extracellular matrix in order to form new blood vessels contributing to the process of sprouting angiogen...
[ "GOC:BHF", "GOC:dph", "GOC:rl", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0043537", "GO:0090049" ]
[ "negatively_regulates GO:0002042" ]
[ "negatively_regulates" ]
[ "GO:0002042" ]
[ "GO:0002042", "GO:0043537", "GO:0090049" ]
[ "GO:0065007", "negatively_regulates GO:0002042" ]
[]
[]
[]
[]
[]
tb
2009-08-07T10:42:00Z
false
true
5
GO:0090052
90,052
regulation of pericentric heterochromatin formation
biological_process
Any process that modulates the frequency, rate or extent of heterochromatin formation at the centromere. Chromatin silencing at the centromere is the repression of transcription of centromeric DNA by altering the structure of chromatin.
[ "GOC:dph", "GOC:tb" ]
null
[ "regulation of chromatin silencing at centromere", "regulation of pericentric heterochromatin assembly" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0031445" ]
[ "regulates GO:0031508" ]
[ "regulates" ]
[ "GO:0031508" ]
[ "GO:0031445", "GO:0031508" ]
[ "GO:0065007", "regulates GO:0031508" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19112\" xsd:anyURI" ]
tb
2009-08-07T10:47:41Z
false
true
5
GO:0090053
90,053
positive regulation of pericentric heterochromatin formation
biological_process
Any process that increases the frequency, rate or extent of pericentric heterochromatin formation.
[ "GOC:dph", "GOC:tb" ]
null
[ "positive regulation of chromatin silencing at centromere", "positive regulation of pericentric heterochromatin assembly" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0031453", "GO:0090052" ]
[ "positively_regulates GO:0031508" ]
[ "positively_regulates" ]
[ "GO:0031508" ]
[ "GO:0031453", "GO:0031508", "GO:0090052" ]
[ "GO:0065007", "positively_regulates GO:0031508" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19112\" xsd:anyURI" ]
tb
2009-08-07T10:49:40Z
false
true
5
GO:0090054
90,054
regulation of silent mating-type cassette heterochromatin formation
biological_process
Any process that modulates the frequency, rate, or extent of heterochromatin formation at silent mating-type cassette.
[ "GOC:dph", "GOC:tb" ]
null
[ "regulation of chromatin silencing at silent mating-type cassette", "regulation of silent mating-type cassette heterochromatin assembly" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0031445" ]
[ "regulates GO:0030466" ]
[ "regulates" ]
[ "GO:0030466" ]
[ "GO:0030466", "GO:0031445" ]
[ "GO:0065007", "regulates GO:0030466" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19112\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/23553\" xsd:anyURI" ]
tb
2009-08-07T10:52:59Z
false
true
6
GO:0090055
90,055
positive regulation of silent mating-type cassette heterochromatin formation
biological_process
Any process that increases the frequency, rate, or extent of heterochromatin formation at silent mating-type cassette.
[ "GOC:dph", "GOC:tb" ]
null
[ "positive regulation of chromatin silencing at silent mating-type cassette", "positive regulation of silent mating-type cassette heterochromatin assembly" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0031453", "GO:0090054" ]
[ "positively_regulates GO:0030466" ]
[ "positively_regulates" ]
[ "GO:0030466" ]
[ "GO:0030466", "GO:0031453", "GO:0090054" ]
[ "GO:0065007", "positively_regulates GO:0030466" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19112\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/23553\" xsd:anyURI" ]
tb
2009-08-07T10:54:36Z
false
true
9
GO:0090056
90,056
regulation of chlorophyll metabolic process
biological_process
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving chlorophyll.
[ "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:1901401" ]
[ "regulates GO:0015994" ]
[ "regulates" ]
[ "GO:0015994" ]
[ "GO:0015994", "GO:1901401" ]
[ "GO:0065007", "regulates GO:0015994" ]
[]
[]
[]
[]
[]
tb
2009-08-07T11:47:27Z
false
true
1
GO:0090057
90,057
root radial pattern formation
biological_process
The radial pattern formation process that results in the formation of the different tissues of the root around its radial axis.
[ "GOC:dph", "GOC:sdb_2009", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0009956" ]
[ "part_of GO:0048364" ]
[ "part_of" ]
[ "GO:0048364" ]
[ "GO:0009956", "GO:0048364" ]
[]
[]
[]
[]
[]
[]
tb
2009-08-11T02:58:06Z
false
true
3
GO:0090058
90,058
metaxylem development
biological_process
The process whose specific outcome is the progression of the metaxylem over time, from its formation to the mature structure. The metaxylem is the part of the primary xylem that differentiates after the protoxylem and before the secondary xylem, if any of the latter is formed.
[ "GOC:dph", "GOC:sdb_2009", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0010089" ]
[]
[]
[]
[ "GO:0010089" ]
[]
[]
[]
[]
[]
[]
tb
2009-08-11T03:05:15Z
false
true
8
GO:0090059
90,059
protoxylem development
biological_process
The process whose specific outcome is the progression of the protoxylem over time, from its formation to the mature structure. The protoxylem comprises the first formed elements of the primary xylem.
[ "GOC:dph", "GOC:sdb_2009", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0010089" ]
[]
[]
[]
[ "GO:0010089" ]
[]
[]
[]
[]
[]
[]
tb
2009-08-11T03:08:06Z
false
true
6
GO:0090060
90,060
regulation of metaxylem development
biological_process
Any process that modulates the frequency, rate, or extent of metaxylem development. Metaxylem development is the process whose specific outcome is the progression of the metaxylem over time, from its formation to the mature structure. The metaxylem is the part of the primary xylem that differentiates after the protoxyl...
[ "GOC:dph", "GOC:sdb_2009", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:2000026" ]
[ "regulates GO:0090058" ]
[ "regulates" ]
[ "GO:0090058" ]
[ "GO:0090058", "GO:2000026" ]
[ "GO:0065007", "regulates GO:0090058" ]
[]
[]
[]
[]
[]
tb
2009-08-11T03:14:54Z
false
true
8
GO:0090062
90,062
regulation of trehalose metabolic process
biological_process
Any process that modulates the frequency, rate or extent of trehalose metabolism, the chemical reactions and pathways involving trehalose, a disaccharide that consists of two molecules of glucose and is isomeric with sucrose.
[ "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0006109" ]
[ "regulates GO:0005991" ]
[ "regulates" ]
[ "GO:0005991" ]
[ "GO:0005991", "GO:0006109" ]
[ "GO:0065007", "regulates GO:0005991" ]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/27111\" xsd:anyURI" ]
tb
2009-08-12T11:24:29Z
false
true
3
GO:0090063
90,063
positive regulation of microtubule nucleation
biological_process
Any process that increases the rate, frequency or extent of microtubule nucleation. Microtubule nucleation is the 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates, some of which go on to support formation of a complete microtubule. Microtubule nucleation usually ...
[ "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0010968", "GO:0031116" ]
[ "positively_regulates GO:0007020" ]
[ "positively_regulates" ]
[ "GO:0007020" ]
[ "GO:0007020", "GO:0010968", "GO:0031116" ]
[ "GO:0065007", "positively_regulates GO:0007020" ]
[]
[]
[]
[]
[]
tb
2009-08-12T11:33:09Z
false
true
6
GO:0090064
90,064
activation of microtubule nucleation
biological_process
Any process that starts the inactive process of microtubule nucleation. Microtubule nucleation is the 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates, some of which go on to support formation of a complete microtubule. Microtubule nucleation usually occurs from ...
[ "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0090063" ]
[]
[]
[]
[ "GO:0090063" ]
[]
[]
[]
[]
[]
[]
tb
2009-08-12T11:36:15Z
false
true
9
GO:0090066
90,066
regulation of anatomical structure size
biological_process
Any process that modulates the size of an anatomical structure.
[ "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0065008" ]
[]
[]
[]
[ "GO:0065008" ]
[]
[]
[]
[]
[]
[]
tb
2009-09-02T11:00:08Z
false
true
9
GO:0090067
90,067
regulation of thalamus size
biological_process
Any process that modulates the size of the thalamus. The thalamus is a part of the diencephalon that is composed of the dorsal thalamus and the ventral thalamus.
[ "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0090066" ]
[]
[]
[]
[ "GO:0090066" ]
[]
[]
[]
[]
[]
[]
tb
2009-09-02T11:03:03Z
false
true
3
GO:0090068
90,068
positive regulation of cell cycle process
biological_process
Any process that increases the rate, frequency or extent of a cellular process that is involved in the progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events.
[ "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0010564", "GO:0045787" ]
[ "positively_regulates GO:0022402" ]
[ "positively_regulates" ]
[ "GO:0022402" ]
[ "GO:0010564", "GO:0022402", "GO:0045787" ]
[ "GO:0065007", "positively_regulates GO:0022402" ]
[]
[]
[]
[]
[]
tb
2009-09-09T11:39:52Z
false
true
4
GO:0090069
90,069
regulation of ribosome biogenesis
biological_process
Any process that modulates the rate, frequency or extent of ribosome biogenesis. Ribosome biogenesis is the cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits.
[ "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0044087" ]
[ "regulates GO:0042254" ]
[ "regulates" ]
[ "GO:0042254" ]
[ "GO:0042254", "GO:0044087" ]
[ "GO:0065007", "regulates GO:0042254" ]
[]
[]
[]
[]
[]
tb
2009-09-11T10:32:17Z
false
true
5
GO:0090070
90,070
positive regulation of ribosome biogenesis
biological_process
Any process that increases the rate, frequency or extent of ribosome biogenesis. Ribosome biogenesis is the cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits.
[ "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0044089", "GO:0090069" ]
[ "positively_regulates GO:0042254" ]
[ "positively_regulates" ]
[ "GO:0042254" ]
[ "GO:0042254", "GO:0044089", "GO:0090069" ]
[ "GO:0065007", "positively_regulates GO:0042254" ]
[]
[]
[]
[]
[]
tb
2009-09-11T10:32:17Z
false
true
3
GO:0090071
90,071
negative regulation of ribosome biogenesis
biological_process
Any process that decreases the rate, frequency or extent of ribosome biogenesis. Ribosome biogenesis is the cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits.
[ "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0048523", "GO:0090069" ]
[ "negatively_regulates GO:0042254" ]
[ "negatively_regulates" ]
[ "GO:0042254" ]
[ "GO:0042254", "GO:0048523", "GO:0090069" ]
[ "GO:0065007", "negatively_regulates GO:0042254" ]
[]
[]
[]
[]
[]
tb
2009-09-11T10:32:17Z
false
true
6
GO:0090072
90,072
obsolete positive regulation of sodium ion transport via voltage-gated sodium channel activity
biological_process
OBSOLETE. Any process that activates or increases the frequency, rate or extent of the directed movement of sodium ions via the activity of voltage-gated sodium channels.
[ "GOC:dph", "GOC:tb" ]
This term was made obsolete because it is ill-defined: channel activities are part of ion transport processes, and not the other way round.
[ "positive regulation of sodium ion transport via voltage-gated sodium channel activity" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0005248" ]
[]
tb
2009-09-11T10:46:13Z
true
true
3
GO:0090073
90,073
obsolete positive regulation of protein homodimerization activity
biological_process
OBSOLETE. Any process that increases the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer.
[ "GOC:dph", "GOC:tb" ]
This term was obsoleted because it represents a molecular function.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/22455\" xsd:anyURI" ]
tb
2009-09-11T11:15:40Z
true
true
1
GO:0090074
90,074
obsolete negative regulation of protein homodimerization activity
biological_process
OBSOLETE. Any process that decreases the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer.
[ "GOC:dph", "GOC:tb" ]
This term was obsoleted because it represents a molecular function. Consider molecular function regulator activity ; GO:0098772 or a child.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/22455\" xsd:anyURI" ]
tb
2009-09-11T11:15:40Z
true
true
5
GO:0090075
90,075
relaxation of muscle
biological_process
A process in which the extent of muscle contraction is reduced. Muscle relaxation can involve a number of processes including the removal of calcium from the cytoplasm to the sarcoplasmic reticulum lumen through the action of Ca2+ ATPases. In some muscles, calcium-independent pathways also play a role in muscle relaxat...
[ "GOC:BHF", "GOC:rl", "PMID:19996365" ]
null
[]
[]
[]
[]
[]
[ "GO:0003012" ]
[]
[]
[]
[ "GO:0003012" ]
[]
[]
[]
[]
[]
[]
tb
2009-09-11T11:43:38Z
false
true
7
GO:0090076
90,076
relaxation of skeletal muscle
biological_process
A process in which the extent of skeletal muscle tissue contraction is reduced. Muscle relaxation involves the removal of calcium from the cytoplasm to the sarcoplasmic reticulum lumen through the action of Ca2+ ATPases.
[ "GOC:BHF", "GOC:rl" ]
null
[]
[]
[]
[]
[]
[ "GO:0090075" ]
[]
[]
[]
[ "GO:0090075" ]
[]
[]
[]
[]
[]
[]
tb
2009-09-11T11:44:32Z
false
true
3
GO:0090077
90,077
foam cell differentiation
biological_process
The process in which a relatively unspecialized cell acquires the specialized features of a foam cell. A foam cell is a type of cell containing lipids in small vacuoles and typically seen in atherosclerotic lesions, as well as other conditions.
[ "GOC:add", "GOC:BHF", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0030154" ]
[]
[]
[]
[ "GO:0030154" ]
[]
[]
[]
[]
[]
[]
tb
2009-09-15T03:46:30Z
false
true
1
GO:0090078
90,078
smooth muscle derived foam cell differentiation
biological_process
The process in which a smooth muscle cell acquires the specialized features of a foam cell. A foam cell is a type of cell containing lipids in small vacuoles and typically seen in atherosclerotic lesions, as well as other conditions.
[ "GOC:add", "GOC:BHF", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0090077" ]
[]
[]
[]
[ "GO:0090077" ]
[]
[]
[]
[]
[]
[]
tb
2009-09-15T03:48:10Z
false
true
8
GO:0090079
90,079
obsolete translation regulator activity, nucleic acid binding
molecular_function
OBSOLETE. Any selective and non-covalent interaction with a nucleic acid involved in the initiation, activation, perpetuation, repression or termination of polypeptide synthesis at the ribosome.
[ "GOC:dph", "GOC:tb", "GOC:vw" ]
This term was added in error, unnecessary grouping term
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0045182" ]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/29353\" xsd:anyURI" ]
tb
2009-10-19T10:19:05Z
true
true
7
GO:0090080
90,080
positive regulation of MAPKKK cascade by fibroblast growth factor receptor signaling pathway
biological_process
The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands resulting in an increase in the rate or frequency of a MAPKKK cascade.
[ "GOC:dph", "GOC:tb" ]
null
[ "positive regulation of MAPKKK cascade by fibroblast growth factor receptor signalling pathway" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0008543", "GO:0043410" ]
[]
[]
[]
[ "GO:0008543", "GO:0043410" ]
[ "GO:0008543", "positively_regulates GO:0000165" ]
[]
[]
[]
[]
[]
tb
2009-10-19T11:30:22Z
false
true
6
GO:0090081
90,081
obsolete regulation of heart induction by regulation of canonical Wnt signaling pathway
biological_process
OBSOLETE. Any process that modulates the rate, frequency or extent of canonical Wnt signaling pathway that regulates heart induction. Canonical Wnt signaling pathway involved in heart induction is the series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the tar...
[ "GOC:mtg_heart" ]
This term was obsoleted because it represents a GO-CAM model.
[ "regulation of heart induction by regulation of canonical Wnt receptor signaling pathway", "regulation of heart induction by regulation of canonical Wnt receptor signalling pathway", "regulation of heart induction by regulation of canonical Wnt-activated signaling pathway" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0060828", "GO:0090381" ]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/25766\" xsd:anyURI" ]
tb
2009-10-23T10:55:18Z
true
true
4
GO:0090082
90,082
obsolete positive regulation of heart induction by negative regulation of canonical Wnt signaling pathway
biological_process
OBSOLETE. Any process that decreases the rate, frequency or extent of canonical Wnt signaling pathway that positively regulates heart induction. Canonical Wnt signaling pathway involved in heart induction is the series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surfa...
[ "GOC:mtg_heart", "PMID:16860783" ]
This term was obsoleted because it represents a GO-CAM model.
[ "positive regulation of heart induction by negative regulation of canonical Wnt receptor signaling pathway", "positive regulation of heart induction by negative regulation of canonical Wnt receptor signalling pathway", "positive regulation of heart induction by negative regulation of canonical Wnt-activated sig...
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0090090", "GO:1901321" ]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/25766\" xsd:anyURI" ]
tb
2009-10-23T10:58:03Z
true
true
8
GO:0090083
90,083
regulation of inclusion body assembly
biological_process
Any process that modulates the rate, frequency, or extent of inclusion body assembly. Inclusion body assembly is the aggregation, arrangement and bonding together of a set of components to form an inclusion body.
[ "GOC:BHF", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0044087", "GO:0051128" ]
[ "regulates GO:0070841" ]
[ "regulates" ]
[ "GO:0070841" ]
[ "GO:0044087", "GO:0051128", "GO:0070841" ]
[ "GO:0065007", "regulates GO:0070841" ]
[]
[]
[]
[]
[]
tb
2009-10-23T11:07:22Z
false
true
4
GO:0090084
90,084
negative regulation of inclusion body assembly
biological_process
Any process that decreases the rate, frequency, or extent of inclusion body assembly. Inclusion body assembly is the aggregation, arrangement and bonding together of a set of components to form an inclusion body.
[ "GOC:BHF", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0051129", "GO:0090083" ]
[ "negatively_regulates GO:0070841" ]
[ "negatively_regulates" ]
[ "GO:0070841" ]
[ "GO:0051129", "GO:0070841", "GO:0090083" ]
[ "GO:0065007", "negatively_regulates GO:0070841" ]
[]
[]
[]
[]
[]
tb
2009-10-23T11:08:56Z
false
true
6
GO:0090085
90,085
regulation of protein deubiquitination
biological_process
Any process that modulates the frequency, rate or extent of protein deubiquitination. Protein deubiquitination is the removal of one or more ubiquitin groups from a protein.
[ "GOC:BHF", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:1903320" ]
[ "regulates GO:0016579" ]
[ "regulates" ]
[ "GO:0016579" ]
[ "GO:0016579", "GO:1903320" ]
[ "GO:0065007", "regulates GO:0016579" ]
[]
[]
[]
[]
[]
tb
2009-10-23T11:16:32Z
false
true
6
GO:0090086
90,086
negative regulation of protein deubiquitination
biological_process
Any process that decreases the frequency, rate or extent of protein deubiquitination. Protein deubiquitination is the removal of one or more ubiquitin groups from a protein.
[ "GOC:BHF", "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0090085", "GO:1903321" ]
[ "negatively_regulates GO:0016579" ]
[ "negatively_regulates" ]
[ "GO:0016579" ]
[ "GO:0016579", "GO:0090085", "GO:1903321" ]
[ "GO:0065007", "negatively_regulates GO:0016579" ]
[]
[]
[]
[]
[]
tb
2009-10-23T11:18:06Z
false
true
5
GO:0090089
90,089
regulation of dipeptide transport
biological_process
Any process that modulates the rate, frequency or extent of dipeptide transport. Dipeptide transport is the directed movement of a dipeptide, a combination of two amino acids by means of a peptide (-CO-NH-) link, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
[ "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0090088" ]
[ "regulates GO:0042938" ]
[ "regulates" ]
[ "GO:0042938" ]
[ "GO:0042938", "GO:0090088" ]
[ "GO:0065007", "regulates GO:0042938" ]
[]
[]
[]
[]
[]
tb
2009-10-23T11:24:36Z
false
true
3
GO:0090090
90,090
negative regulation of canonical Wnt signaling pathway
biological_process
Any process that decreases the rate, frequency, or extent of the Wnt signaling pathway through beta-catenin, the series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a ch...
[ "GOC:dph", "GOC:tb" ]
null
[ "negative regulation of canonical Wnt receptor signaling pathway", "negative regulation of canonical Wnt receptor signalling pathway", "negative regulation of canonical Wnt-activated signaling pathway", "negative regulation of catenin import into nucleus", "negative regulation of catenin protein nuclear tra...
[ "EXACT", "EXACT", "EXACT", "NARROW", "NARROW", "EXACT" ]
[ "GO:0035414" ]
[]
[ "Reactome:R-HSA-3772470 \"Negative regulation of TCF-dependent signaling by WNT ligand antagonists\"", "Reactome:R-HSA-4641258 \"Degradation of DVL\"" ]
[ "GO:0030178", "GO:0060828" ]
[ "negatively_regulates GO:0060070" ]
[ "negatively_regulates" ]
[ "GO:0060070" ]
[ "GO:0030178", "GO:0060070", "GO:0060828" ]
[ "GO:0065007", "negatively_regulates GO:0060070" ]
[]
[]
[]
[]
[]
tb
2009-10-30T11:27:17Z
false
true
3