LiteFold/GO · Datasets at Hugging Face

GO:0080102

80,102

3-methylthiopropyl glucosinolate S-oxygenase activity

molecular_function

Catalysis of the reaction: 3-methylthiopropyl-glucosinolate = 3-methylsulfinylpropyl-glucosinolate.

[ "PMID:18799661" ]

null

[]

[ "MetaCyc:RXN-2221" ]

[ "GO:0016705" ]

[]

[ "GO:0016705" ]

[]

dhl

2009-04-23T04:26:41Z

false

true

9

GO:0080103

80,103

4-methylthiopropyl glucosinolate S-oxygenase activity

molecular_function

Catalysis of the reaction: 4-methylthiopropyl-glucosinolate = 4-methylsulfinylpropyl-glucosinolate.

[ "PMID:18799661" ]

null

[]

[ "GO:0016705" ]

[]

[ "GO:0016705" ]

[]

dhl

2009-04-23T04:27:45Z

false

true

7

GO:0080104

80,104

5-methylthiopropyl glucosinolate S-oxygenase activity

molecular_function

Catalysis of the reaction: 5-methylthiopropyl-glucosinolate = 5-methylsulfinylpropyl-glucosinolate.

[ "PMID:18799661" ]

null

[]

[ "GO:0016705" ]

[]

[ "GO:0016705" ]

[]

dhl

2009-04-23T04:28:25Z

false

true

2

GO:0080105

80,105

6-methylthiopropyl glucosinolate S-oxygenase activity

molecular_function

Catalysis of the reaction: 6-methylthiopropyl-glucosinolate = 6-methylsulfinylpropyl-glucosinolate.

[ "PMID:18799661" ]

null

[]

[ "GO:0016705" ]

[]

[ "GO:0016705" ]

[]

dhl

2009-04-23T04:28:55Z

false

true

8

GO:0080106

80,106

7-methylthiopropyl glucosinolate S-oxygenase activity

molecular_function

Catalysis of the reaction: 7-methylthiopropyl-glucosinolate = 7-methylsulfinylpropyl-glucosinolate.

[ "PMID:18799661" ]

null

[]

[ "GO:0016705" ]

[]

[ "GO:0016705" ]

[]

dhl

2009-04-23T04:29:37Z

false

true

7

GO:0080107

80,107

8-methylthiopropyl glucosinolate S-oxygenase activity

molecular_function

Catalysis of the reaction: 8-methylthiopropyl-glucosinolate = 8-methylsulfinylpropyl-glucosinolate.

[ "PMID:18799661" ]

null

[]

[ "GO:0016705" ]

[]

[ "GO:0016705" ]

[]

dhl

2009-04-23T04:30:08Z

false

true

5

GO:0080108

80,108

S-alkylthiohydroximate lyase activity

molecular_function

Catalysis of the conversion of a S-alkylthiohydroximate to a thiohydroximate.

[ "PMID:14871316" ]

null

[ "S-alkylthiohydroximate C-S lyase activity" ]

[ "NARROW" ]

[]

[ "GO:0016846" ]

[]

[ "GO:0016846" ]

[]

dhl

2009-04-23T04:35:14Z

false

true

8

GO:0080109

80,109

indole-3-acetonitrile nitrile hydratase activity

molecular_function

Catalysis of the reaction: indole-3-acetonitrile + H2O = indole-3-acetamide.

[ "MetaCyc:RXN-7567", "PMID:11607511", "PMID:12430025" ]

null

[]

[ "KEGG_REACTION:R04020", "MetaCyc:RXN-7567" ]

[ "GO:0018822" ]

[]

[ "GO:0018822" ]

[]

dhl

2009-04-23T04:37:57Z

false

true

4

GO:0080110

80,110

sporopollenin biosynthetic process

biological_process

The chemical reactions and pathways resulting in the formation of sporopollenin, a primary constituent of the pollen exine layer.

[ "PMID:19218397" ]

null

[ "sporopollenin biosynthesis" ]

[ "EXACT" ]

[]

[ "GO:0009058" ]

[ "part_of GO:0010584" ]

[ "part_of" ]

[ "GO:0010584" ]

[ "GO:0009058", "GO:0010584" ]

[]

dhl

2009-04-23T04:44:16Z

false

true

2

GO:0080112

80,112

seed growth

biological_process

The increase in size or mass of a seed. A seed is a propagating organ formed in the reproductive cycle of a spermatophyte, derived from the ovule and enclosing an embryo.

[ "GOC:dhl", "PO:0009010" ]

null

[]

[ "GO:0048589" ]

[ "part_of GO:0048316" ]

[ "part_of" ]

[ "GO:0048316" ]

[ "GO:0048316", "GO:0048589" ]

[]

dhl

2009-04-27T02:52:07Z

false

true

1

GO:0080113

80,113

regulation of seed growth

biological_process

Any process that modulates the frequency, rate or extent of growth of the seed of an plant.

[ "PMID:19141706" ]

null

[ "regulation of seed size" ]

[ "EXACT" ]

[]

[ "GO:0048638" ]

[ "regulates GO:0080112" ]

[ "regulates" ]

[ "GO:0080112" ]

[ "GO:0048638", "GO:0080112" ]

[ "GO:0065007", "regulates GO:0080112" ]

[]

dhl

2009-04-27T02:55:01Z

false

true

7

GO:0080114

80,114

obsolete positive regulation of glycine hydroxymethyltransferase activity

biological_process

OBSOLETE. Any process that activates or increases the frequency, rate or extent of glycine hydroxymethyltransferase activity, the catalysis of the reaction 5,10-methylenetetrahydrofolate + glycine + H2O = tetrahydrofolate + L-serine.

[ "PMID:19223513" ]

This term was obsoleted because it represents a molecular function.

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/28482\" xsd:anyURI" ]

dhl

2009-04-27T03:27:15Z

true

4

GO:0080115

80,115

myosin XI tail binding

molecular_function

Binding to the tail region of a myosin XI heavy chain.

[ "PMID:18703495" ]

null

[]

[ "GO:0032029" ]

[]

[ "GO:0032029" ]

[]

dhl

2009-04-27T03:31:45Z

false

true

1

GO:0080116

80,116

glucuronoxylan glucuronosyltransferase activity

molecular_function

Catalysis of the transfer of glucuronate to the xylan backbone of glucuronoxylan molecule.

[ "PMID:18980649" ]

null

[]

[ "GO:0015020" ]

[]

[ "GO:0015020" ]

[]

dhl

2009-04-27T03:33:49Z

false

true

1

GO:0080117

80,117

secondary growth

biological_process

Lateral growth of a plant axis (shoot axis or root) that is an increase in thickness resulting from formation of secondary vascular tissues by the vascular cambium.

[ "ISBN:0471245208", "PMID:19074290", "PO:0005598", "PO:0025004" ]

Occurs in vascular plants, including gymnosperms and most dicotyledons. Commonly supplemented by activity of the cork cambium or phellogen (PO:0005599). Monocotyledons do not have secondary growth, but may undergo primary thickening (GO:0080192) or secondary thickening (GO:0080191), which can give the appearance of sec...

[ "cambial secondary growth" ]

[ "EXACT" ]

[]

[ "GO:0080190" ]

[]

[ "GO:0080190" ]

[]

dhl

2009-04-27T03:36:28Z

false

true

9

GO:0080118

80,118

brassinosteroid sulfotransferase activity

molecular_function

Catalysis of the reaction: a brassinosteroid + 3'-phosphoadenosine-5'-phosphosulfate = sulfated brassinosteroid + adenosine-3',5'-diphosphate. This reaction is the transfer of a sulfate group to the hydroxyl group of a brassinosteroid acceptor, producing the sulfated brassinosteroid derivative.

[ "PMID:10409637", "PMID:17039368" ]

null

[]

[ "GO:0008146" ]

[]

[ "GO:0008146" ]

[]

[ "skos:broadMatch EC:2.8.2.-" ]

dhl

2009-04-27T03:39:36Z

false

true

3

GO:0080119

80,119

ER body organization

biological_process

A process that is carried out at the cellular level which results in the formation of ER (endoplasmic reticulum) body. ER body is a compartment found in plant cells that is derived from the ER. The structures have a characteristic shape and size (10 mm long and 0.5 mm wide) and are surrounded with ribosomes. They have ...

[ "PMID:18780803", "PMID:19147648" ]

null

[ "endoplasmic reticulum body organization", "endoplasmic reticulum body organization and biogenesis", "ER body organisation", "ER body organization and biogenesis" ]

[ "EXACT", "RELATED", "EXACT", "RELATED" ]

[]

[ "GO:0006996" ]

[]

[ "GO:0006996" ]

[]

dhl

2009-04-27T04:01:26Z

false

true

5

GO:0080120

80,120

CAAX-box protein maturation

biological_process

A series of specific posttranslational modifications to the CAAX box region of CAAX box proteins. CAAX box proteins are eukaryotic proteins that contain a CAAX motif where the C is a cysteine, the two A residues are aliphatic amino acids and the X can be one of several amino acids. The CAAX-box proteins undergo three s...

[ "PMID:12039957", "PMID:17114793", "PMID:18641086" ]

null

[ "CAAX-box protein processing", "farnesylated protein maturation" ]

[ "RELATED", "RELATED" ]

[]

[ "GO:0051604" ]

[ "has_part GO:0016485", "has_part GO:0018342" ]

[ "has_part", "has_part" ]

[ "GO:0016485", "GO:0018342" ]

[ "GO:0016485", "GO:0018342", "GO:0051604" ]

[]

dhl

2009-04-28T03:06:13Z

false

true

3

GO:0080122

80,122

AMP transmembrane transporter activity

molecular_function

Enables the transfer of AMP, adenosine monophosphate, from one side of a membrane to the other.

[ "PMID:18923018" ]

null

[ "adenosine monophosphate transmembrane transporter activity" ]

[ "EXACT" ]

[]

[ "GO:0000295", "GO:0005346" ]

[ "part_of GO:0080121" ]

[ "part_of" ]

[ "GO:0080121" ]

[ "GO:0000295", "GO:0005346", "GO:0080121" ]

[]

dhl

2009-04-28T04:05:39Z

false

true

5

GO:0080123

80,123

jasmonoyl-L-amino acid ligase activity

molecular_function

Catalysis of the reaction: a jasmonate + an L-alpha-amino acid + ATP = a jasmonyl-L-amino acid + AMP + diphosphate + H+. In Arabidopsis, isoleucine is the principal amino acid that conjugates with JA to form JA (JA-Ile). Other amino acid can be conjugated with JA such as valine, leucine, and phenylalanine.

[ "PMID:15258265", "PMID:17291501", "PMID:33821356", "RHEA:55772" ]

null

[ "ja-amino synthetase activity", "jasmonate-amido synthetase activity", "jasmonate-amino acid conjugate synthetase activity", "jasmonate-amino acid synthetase activity", "jasmonate-amino synthetase activity", "jasmonate:amino acid synthetase activity", "jasmonic acid-amino synthetase activity", "jasmon...

[ "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT", "EXACT" ]

[]

[ "EC:6.3.2.52", "MetaCyc:RXN-10435", "MetaCyc:RXN-10457", "MetaCyc:RXN-10459", "RHEA:54812", "RHEA:55772" ]

[ "GO:0016881" ]

[]

[ "GO:0016881" ]

[]

[ "skos:exactMatch EC:6.3.2.52", "skos:exactMatch RHEA:55772", "skos:narrowMatch MetaCyc:RXN-10435", "skos:narrowMatch MetaCyc:RXN-10457", "skos:narrowMatch MetaCyc:RXN-10459", "skos:narrowMatch RHEA:54812", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/26578\" xsd:anyURI", "te...

dhl

2009-04-28T04:08:35Z

false

true

2

GO:0080124

80,124

pheophytinase activity

molecular_function

Catalysis of the reaction: pheophytin + H2O = phytol + pheophorbide.

[ "PMID:19304936" ]

null

[ "pheophytin pheophorbide hydrolase activity" ]

[ "EXACT" ]

[]

[ "GO:0052689" ]

[]

[ "GO:0052689" ]

[]

dhl

2009-04-28T04:16:11Z

false

true

8

GO:0080125

80,125

obsolete multicellular structure septum development

biological_process

OBSOLETE. The process whose specific outcome is the progression of the multicellular structure septum over time, from its formation to the mature structure. The multicellular structure septum is the thin partition or membrane that divides a cavity or a mass of tissue.

[ "GOC:dhl" ]

This term was made obsolete because it is not a useful grouping term.

[]

dhl

2009-04-28T04:31:14Z

true

5

GO:0080126

80,126

ovary septum development

biological_process

The process whose specific outcome is the progression of the ovary septum over time, from its formation to the mature structure. The ovary septum is the thin partition that divides the ovary, the basal portion of a carpel or group of fused carpels, that encloses the ovule(s).

[ "PMID:17855426" ]

null

[]

[ "GO:0003006", "GO:1905328" ]

[ "part_of GO:0035670" ]

[ "part_of" ]

[ "GO:0035670" ]

[ "GO:0003006", "GO:0035670", "GO:1905328" ]

[]

dhl

2009-04-28T04:34:39Z

false

true

5

GO:0080127

80,127

fruit septum development

biological_process

The process whose specific outcome is the progression of the fruit septum over time, from its formation to the mature structure. The fruit septum is a thin partition or membrane that divides a cavity or a mass of tissue in the fruit.

[ "GOC:dhl", "PO:0005008" ]

null

[]

[ "GO:0003006", "GO:0009791", "GO:1905328" ]

[ "part_of GO:0010154" ]

[ "part_of" ]

[ "GO:0010154" ]

[ "GO:0003006", "GO:0009791", "GO:0010154", "GO:1905328" ]

[]

dhl

2009-04-28T04:37:19Z

false

true

5

GO:0080128

80,128

anther septum development

biological_process

The process whose specific outcome is the progression of the anther septum over time, from its formation to the mature structure. The anther septum is a thin partition or stretch of cells that are present in the anther dehiscence zone.

[ "GOC:dhl", "PO:0005010" ]

null

[]

[ "GO:0003006", "GO:1905328" ]

[ "part_of GO:0048653" ]

[ "part_of" ]

[ "GO:0048653" ]

[ "GO:0003006", "GO:0048653", "GO:1905328" ]

[]

dhl

2009-04-28T04:41:16Z

false

true

2

GO:0080129

80,129

proteasome core complex assembly

biological_process

The aggregation, arrangement and bonding together of a mature, active 20S proteasome core particle complex that does not contain any regulatory particles.

[ "PMID:12401807", "PMID:17971041" ]

null

[ "20S proteasome assembly" ]

[ "EXACT" ]

[]

[ "GO:0043248" ]

[]

[ "GO:0043248" ]

[]

dhl

2009-04-29T03:34:50Z

false

true

1

GO:0080130

80,130

L-phenylalanine:2-oxoglutarate transaminase activity

molecular_function

Catalysis of the reaction: L-phenylalanine + 2-oxoglutarate = 3-phenylpyruvate + L-glutamate.

[ "PMID:18394996", "RHEA:25152" ]

null

[ "L-phenylalanine-2-oxoglutarate transaminase activity", "L-phenylalanine:2-oxoglutarate aminotransferase activity", "L-phenylalanine:alpha-ketoglutarate aminotransferase activity" ]

[ "EXACT", "EXACT", "EXACT" ]

[]

[ "KEGG_REACTION:R00694", "MetaCyc:RXN-10814", "RHEA:25152" ]

[ "GO:0008793" ]

[]

[ "GO:0008793" ]

[]

[ "skos:broadMatch EC:2.6.1.5", "skos:exactMatch RHEA:25152", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/28070\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31139\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontolo...

dhl

2009-04-29T03:42:47Z

false

true

2

GO:0080131

80,131

hydroxyjasmonate sulfotransferase activity

molecular_function

Catalysis of the reaction: a hydroxyjasmonate + 3'-phosphoadenosine-5'-phosphosulfate = a hydroxyjasmonate sulfate + adenosine-3',5'-diphosphate.

[ "EC:2.8.2.39", "PMID:12637544" ]

null

[ "11-hydroxyjasmonate sulfotransferase activity", "11-hydroxyjasmonic acid sulfotransferase activity", "11-OHJA sulfotransferase activity", "12-hydroxyjasmonate sulfotransferase activity", "12-hydroxyjasmonic acid sulfotransferase activity", "12-OHJA sulfotransferase activity", "hydroxyjasmonic acid sulf...

[ "NARROW", "NARROW", "NARROW", "NARROW", "NARROW", "NARROW", "EXACT", "EXACT" ]

[]

[ "EC:2.8.2.39", "MetaCyc:RXN-10451", "RHEA:52728", "RHEA:52732" ]

[ "GO:0008146" ]

[]

[ "GO:0008146" ]

[]

[ "skos:exactMatch EC:2.8.2.39", "skos:exactMatch MetaCyc:RXN-10451", "skos:narrowMatch RHEA:52728", "skos:narrowMatch RHEA:52732", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/28070\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30193\" xsd...

dhl

2009-04-29T03:47:12Z

false

true

8

GO:0080132

80,132

fatty acid 2-hydroxylase activity

molecular_function

Catalysis of the hydroxylation of the C-2 position in a fatty acid. The 2-hydroxylation may occur on free fatty acids or within the fatty acyl chain of a sphingolipid.

[ "PMID:36902339" ]

null

[ "fatty acid alpha-hydroxylase activity" ]

[ "EXACT" ]

[]

[ "Reactome:R-HSA-5693761 \"FA2H hydroxylates 1,2-saturated fatty acids\"" ]

[ "GO:0016716" ]

[]

[ "GO:0016716" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/27541\" xsd:anyURI" ]

dhl

2009-05-06T04:43:36Z

false

true

3

GO:0080133

80,133

midchain alkane hydroxylase activity

molecular_function

Catalysis of the conversion of an alkane to a secondary alcohol.

[ "PMID:17905869" ]

null

[]

[ "GO:0016713" ]

[]

[ "GO:0016713" ]

[]

dhl

2009-05-06T04:46:17Z

false

true

4

GO:0080134

80,134

regulation of response to stress

biological_process

Any process that modulates the frequency, rate or extent of a response to stress. Response to stress is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not ...

[ "GOC:dhl" ]

Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.

[]

[ "gocheck_do_not_annotate" ]

[]

[ "GO:0048583" ]

[ "regulates GO:0006950" ]

[ "regulates" ]

[ "GO:0006950" ]

[ "GO:0006950", "GO:0048583" ]

[ "GO:0065007", "regulates GO:0006950" ]

[]

dhl

2009-05-06T04:51:28Z

false

true

3

GO:0080135

80,135

regulation of cellular response to stress

biological_process

Any process that modulates the frequency, rate or extent of a cellular response to stress. Cellular response to stress is a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating the organism is under stress. The stress is u...

[ "GOC:dhl" ]

null

[]

[ "GO:0050794", "GO:0080134" ]

[ "regulates GO:0033554" ]

[ "regulates" ]

[ "GO:0033554" ]

[ "GO:0033554", "GO:0050794", "GO:0080134" ]

[ "GO:0065007", "regulates GO:0033554" ]

[]

dhl

2009-05-06T05:02:52Z

false

true

1

GO:0080136

80,136

priming of cellular response to stress

biological_process

The process that enables cells to respond in a more rapid and robust manner than nonprimed cells to much lower levels of a stimulus indicating the organism is under stress.

[ "PMID:19318610" ]

null

[ "priming of response to stress", "priming of stress response" ]

[ "BROAD", "BROAD" ]

[]

[ "GO:0080135" ]

[ "part_of GO:0033554" ]

[ "part_of" ]

[ "GO:0033554" ]

[ "GO:0033554", "GO:0080135" ]

[]

dhl

2009-05-06T05:05:15Z

false

true

4

GO:0080139

80,139

borate efflux transmembrane transporter activity

molecular_function

Enables the transfer of borate from the inside of the cell to the outside of the cell across a membrane.

[ "PMID:18603465" ]

null

[ "boron efflux transmembrane transporter activity" ]

[ "RELATED" ]

[]

[ "GO:0015562" ]

[ "part_of GO:0035445" ]

[ "part_of" ]

[ "GO:0035445" ]

[ "GO:0015562", "GO:0035445" ]

[]

dhl

2009-05-19T04:11:45Z

false

true

1

GO:0080140

80,140

regulation of jasmonic acid metabolic process

biological_process

Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving jasmonic acid.

[ "GOC:dhl" ]

null

[]

[ "GO:0019217" ]

[ "regulates GO:0009694" ]

[ "regulates" ]

[ "GO:0009694" ]

[ "GO:0009694", "GO:0019217" ]

[ "GO:0065007", "regulates GO:0009694" ]

[]

dhl

2009-05-19T04:24:55Z

false

true

4

GO:0080141

80,141

regulation of jasmonic acid biosynthetic process

biological_process

Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of jasmonic acid.

[ "GOC:dhl" ]

null

[]

[ "GO:0042304", "GO:0080140" ]

[ "regulates GO:0009695" ]

[ "regulates" ]

[ "GO:0009695" ]

[ "GO:0009695", "GO:0042304", "GO:0080140" ]

[ "GO:0065007", "regulates GO:0009695" ]

[]

dhl

2009-05-19T04:28:39Z

false

true

8

GO:0080142

80,142

regulation of salicylic acid biosynthetic process

biological_process

Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of salicylic acid.

[ "GOC:dhl" ]

null

[]

[ "GO:0009889", "GO:0010337" ]

[ "regulates GO:0009697" ]

[ "regulates" ]

[ "GO:0009697" ]

[ "GO:0009697", "GO:0009889", "GO:0010337" ]

[ "GO:0065007", "regulates GO:0009697" ]

[]

dhl

2009-05-19T04:38:23Z

false

true

2

GO:0080143

80,143

regulation of amino acid export

biological_process

Any process that modulates the frequency, rate or extent of amino acid export. Amino acid export is the directed movement of amino acids out of a cell or organelle.

[ "PMID:20018597" ]

null

[]

[ "GO:1903789" ]

[ "regulates GO:0032973" ]

[ "regulates" ]

[ "GO:0032973" ]

[ "GO:0032973", "GO:1903789" ]

[]

dhl

2010-01-20T04:43:56Z

false

true

3

GO:0080144

80,144

intracellular amino acid homeostasis

biological_process

A homeostatic process involved in the maintenance of a steady state level of amino acids within a cell.

[ "PMID:19955263" ]

null

[ "amino acid homeostasis", "cellular amino acid homeostasis" ]

[ "BROAD", "EXACT" ]

[]

[ "GO:0055082" ]

[]

[ "GO:0055082" ]

[]

dhl

2010-01-27T04:47:27Z

false

true

8

GO:0080145

80,145

intracellular cysteine homeostasis

biological_process

A homeostatic process involved in the maintenance of a steady state level of cysteine within a cell.

[ "PMID:19955263" ]

null

[ "cellular cysteine homeostasis", "cysteine homeostasis" ]

[ "EXACT", "EXACT" ]

[]

[ "GO:0080144" ]

[]

[ "GO:0080144" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/24220\" xsd:anyURI" ]

dhl

2010-01-27T04:49:14Z

false

true

6

GO:0080146

80,146

L-cysteine desulfhydrase activity

molecular_function

Catalysis of the reaction: L-cysteine + H2O = hydrogen sulfide + pyruvate + NH4+ + H+.

[ "PMID:19955263", "RHEA:24931" ]

null

[]

[ "EC:4.4.1.28", "MetaCyc:LCYSDESULF-RXN", "RHEA:24931" ]

[ "GO:0016846" ]

[]

[ "GO:0016846" ]

[]

[ "skos:broadMatch EC:4.4.1.1", "skos:exactMatch EC:4.4.1.28", "skos:exactMatch MetaCyc:LCYSDESULF-RXN", "skos:exactMatch RHEA:24931", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/28011\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30959\" ...

dhl

2010-01-27T04:50:43Z

false

true

7

GO:0080147

80,147

root hair cell development

biological_process

The process whose specific outcome is the progression of a root hair cell over time, from its formation to the mature state.

[ "PMID:19675148" ]

null

[]

[ "GO:0048468" ]

[ "part_of GO:0048765" ]

[ "part_of" ]

[ "GO:0048765" ]

[ "GO:0048468", "GO:0048765" ]

[]

dhl

2010-03-26T01:45:08Z

false

true

6

GO:0080148

80,148

negative regulation of response to water deprivation

biological_process

Any process that stops, prevents, or reduces the frequency, rate or extent of a response to water deprivation. Response to water deprivation is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, ...

[ "PMID:18835996" ]

null

[]

[ "GO:0048585", "GO:2000070" ]

[ "negatively_regulates GO:0009414" ]

[ "negatively_regulates" ]

[ "GO:0009414" ]

[ "GO:0009414", "GO:0048585", "GO:2000070" ]

[]

dhl

2010-03-26T01:58:11Z

false

true

6

GO:0080149

80,149

sucrose induced translational repression

biological_process

Any process that stops, prevents or reduces the rate of translation as a result of increase in sucrose level.

[ "PMID:19403731" ]

null

[ "negative regulation of translation in response to sucrose" ]

[ "EXACT" ]

[]

[ "GO:0032055" ]

[]

[ "GO:0032055" ]

[]

dhl

2010-03-26T04:13:15Z

false

true

4

GO:0080150

80,150

S-adenosyl-L-methionine:benzoic acid carboxyl methyl transferase activity

molecular_function

Catalysis of the reaction: benzoate + S-adenosyl-L-methionine = methylbenzoate + S-adenosyl-L-homocysteine.

[ "MetaCyc:RXN-6722", "PMID:10852939" ]

null

[ "S-adenosyl-L-methionine:benzoate carboxyl methyltransferase activity" ]

[ "EXACT" ]

[]

[ "MetaCyc:RXN-6722", "RHEA:36099" ]

[ "GO:0008171" ]

[]

[ "GO:0008171" ]

[]

[ "skos:exactMatch RHEA:36099", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30193\" xsd:anyURI" ]

dhl

2010-03-26T04:19:39Z

false

true

3

GO:0080151

80,151

positive regulation of salicylic acid mediated signaling pathway

biological_process

Any process that activates or increases the frequency, rate or extent of salicylic acid mediated signal transduction.

[ "PMID:20181750" ]

null

[ "positive regulation of salicylic acid mediated signalling pathway" ]

[ "EXACT" ]

[]

[ "GO:0009967", "GO:2000031" ]

[ "positively_regulates GO:0009863" ]

[ "positively_regulates" ]

[ "GO:0009863" ]

[ "GO:0009863", "GO:0009967", "GO:2000031" ]

[]

dhl

2010-05-20T03:10:46Z

false

true

8

GO:0080153

80,153

negative regulation of reductive pentose-phosphate cycle

biological_process

Any process that stops, prevents, or reduces the frequency, rate or extent of the reductive pentose-phosphate cycle.

[ "PMID:17031544", "PMID:20399532" ]

null

[ "negative regulation of C3 photosynthesis", "negative regulation of Calvin cycle" ]

[ "NARROW", "NARROW" ]

[]

[ "GO:0009890", "GO:0045912", "GO:0080152", "GO:1905156" ]

[ "negatively_regulates GO:0019253" ]

[ "negatively_regulates" ]

[ "GO:0019253" ]

[ "GO:0009890", "GO:0019253", "GO:0045912", "GO:0080152", "GO:1905156" ]

[]

dhl

2010-07-01T02:55:27Z

false

true

1

GO:0080154

80,154

regulation of fertilization

biological_process

Any process that modulates the rate, frequency or extent of fertilization. Fertilization is the union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy).

[ "GOC:DHL", "PMID:20478994" ]

null

[]

[ "GO:2000241" ]

[ "regulates GO:0009566" ]

[ "regulates" ]

[ "GO:0009566" ]

[ "GO:0009566", "GO:2000241" ]

[ "GO:0065007", "regulates GO:0009566" ]

[]

dhl

2010-09-01T03:44:27Z

false

true

4

GO:0080155

80,155

regulation of double fertilization forming a zygote and endosperm

biological_process

Any process that modulates the rate, frequency or extent of double fertilization forming a zygote and endosperm. Double fertilization forming a zygote and endosperm is a type of fertilization where one of the two sperm nuclei from the pollen tube fuses with the egg nucleus to form a 2n zygote, and the other fuses with ...

[ "GOC:DHL", "PMID:20478994" ]

null

[]

[ "GO:0080154" ]

[ "regulates GO:0009567" ]

[ "regulates" ]

[ "GO:0009567" ]

[ "GO:0009567", "GO:0080154" ]

[]

dhl

2010-09-01T03:46:39Z

false

true

4

GO:0080156

80,156

mitochondrial mRNA modification

biological_process

The covalent alteration within the mitochondrion of one or more nucleotides within an mRNA to produce an mRNA molecule with a sequence that differs from that coded genetically.

[ "PMID:20566637" ]

null

[ "mitochondrial mRNA editing", "mitochondrial RNA editing" ]

[ "NARROW", "BROAD" ]

[]

[ "GO:0016556", "GO:1900864" ]

[]

[ "GO:0016556", "GO:1900864" ]

[ "GO:0016556", "occurs_in GO:0005739" ]

[]

dhl

2010-09-01T03:55:48Z

false

true

7

GO:0080157

80,157

regulation of plant-type cell wall organization or biogenesis

biological_process

Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving plant-type cell wall organization or biogenesis. Plant-type cell wall organization or biogenesis is a process that results in the biosynthesis of constituent macromolecules, assembly, arrangement of constituent par...

[ "PMID:20530756" ]

null

[ "regulation of plant-type cell wall organisation or biogenesis" ]

[ "EXACT" ]

[]

[ "GO:1903338" ]

[ "regulates GO:0071669" ]

[ "regulates" ]

[ "GO:0071669" ]

[ "GO:0071669", "GO:1903338" ]

[]

dhl

2010-09-01T04:02:37Z

false

true

1

GO:0080158

80,158

obsolete chloroplast ribulose bisphosphate carboxylase complex biogenesis

biological_process

OBSOLETE. A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a chloroplast ribulose bisphosphate carboxylase (RubisCO) complex. Includes the synthesis of the constituent protein molecules, and those protein modifications that are involved...

[ "PMID:20561259" ]

The reason for obsoletion is that 'biogenesis' as related to a protein is translation, and there is no indication that the members of these complexes are synthesized in a particular way. Historically biogenesis terms were created for some processes when the level of a molecule was changed by an unknown mechanism, for i...

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/15173\" xsd:anyURI" ]

dhl

2010-09-01T04:05:55Z

true

3

GO:0080159

80,159

zygote elongation

biological_process

The process in which the zygote irreversibly increases in size in one dimension after fertilization. An example of such a process is found in Arabidopsis thaliana.

[ "GOC:tb" ]

null

[]

[ "GO:0009826", "GO:0048598" ]

[]

[ "GO:0009826", "GO:0048598" ]

[]

dhl

2010-09-01T04:07:51Z

false

true

9

GO:0080160

80,160

selenate transport

biological_process

The directed movement of selenate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

[ "PMID:18761637" ]

null

[]

[ "GO:0015698" ]

[]

[ "GO:0015698" ]

[]

dhl

2010-09-01T04:17:38Z

false

true

3

GO:0080161

80,161

auxin transmembrane transporter activity

molecular_function

Enables the transfer of auxins from one side of a membrane to the other. Auxins are plant hormones that regulate aspects of plant growth.

[ "PMID:19506555" ]

null

[]

[ "GO:0022857" ]

[ "part_of GO:0060918" ]

[ "part_of" ]

[ "GO:0060918" ]

[ "GO:0022857", "GO:0060918" ]

[]

dhl

2010-09-23T03:37:43Z

false

true

4

GO:0080162

80,162

endoplasmic reticulum to cytosol auxin transport

biological_process

The directed movement of auxins from endoplasmic reticulum to cytosol.

[ "PMID:19506555" ]

null

[ "intracellular auxin transport" ]

[ "BROAD" ]

[]

[ "GO:0010496", "GO:0055085", "GO:0060918" ]

[]

[ "GO:0010496", "GO:0055085", "GO:0060918" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/22948\" xsd:anyURI" ]

dhl

2010-09-23T03:46:29Z

false

true

6

GO:0080163

80,163

obsolete regulation of protein serine/threonine phosphatase activity

biological_process

OBSOLETE. Any process that modulates the frequency, rate or extent of protein serine/threonine phosphatase activity: catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate.

[ "PMID:19407142" ]

The reason for obsoletion is that this term represents a single-step process (regulation of MF).

[ "regulation of protein phosphatase type 2c activity" ]

[ "NARROW" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/28499\" xsd:anyURI" ]

dhl

2010-09-23T03:51:37Z

true

5

GO:0080164

80,164

regulation of nitric oxide metabolic process

biological_process

Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water.

[ "GOC:DHL" ]

null

[]

[ "GO:0019222" ]

[ "regulates GO:0046209" ]

[ "regulates" ]

[ "GO:0046209" ]

[ "GO:0019222", "GO:0046209" ]

[ "GO:0065007", "regulates GO:0046209" ]

[]

dhl

2010-09-23T04:02:50Z

false

true

8

GO:0080165

80,165

callose deposition in phloem sieve plate

biological_process

Any process in which callose is transported to, and/or maintained in, phloem sieve plate. Callose is a linear 1,3-beta-d-glucan formed from UDP-glucose and is found in certain plant cell walls.

[ "PMID:19470642" ]

null

[]

[ "GO:0052545" ]

[]

[ "GO:0052545" ]

[]

dhl

2010-09-23T04:12:49Z

false

true

6

GO:0080166

80,166

stomium development

biological_process

The process whose specific outcome is the progression of the stomium over time, from its formation to the mature structure. A stomium is a fissure or pore in the anther lobe through which the pollen is released.

[ "GOC:tb" ]

null

[]

[ "GO:0003006", "GO:0022412", "GO:0048856" ]

[ "part_of GO:0048653" ]

[ "part_of" ]

[ "GO:0048653" ]

[ "GO:0003006", "GO:0022412", "GO:0048653", "GO:0048856" ]

[]

dhl

2010-09-23T05:03:40Z

false

true

9

GO:0080167

80,167

response to karrikin

biological_process

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a karrikin stimulus. Karrikins are signaling molecules in smoke from burning vegetation that trigger seed germination for many angiosperms (flower...

[ "PMID:20351290" ]

null

[]

[ "GO:0009628" ]

[]

[ "GO:0009628" ]

[]

dhl

2010-09-23T05:07:22Z

false

true

6

GO:0080169

80,169

cellular response to boron-containing substance deprivation

biological_process

Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of boron obtained from boron-containing substances.

[ "PMID:20059736" ]

null

[ "cellular response to boron deprivation", "cellular response to boron starvation" ]

[ "EXACT", "EXACT" ]

[]

[ "GO:0009267", "GO:0062197", "GO:0080029" ]

[]

[ "GO:0009267", "GO:0062197", "GO:0080029" ]

[]

dhl

2010-09-23T05:10:00Z

false

true

8

GO:0080170

80,170

hydrogen peroxide transmembrane transport

biological_process

The process in which H2O2 is transported across a membrane.

[ "GOC:tb" ]

Note that this term is not intended for use in annotating lateral movement within membranes.

[ "hydrogen peroxide membrane transport" ]

[ "EXACT" ]

[]

[ "GO:0055085" ]

[]

[ "GO:0055085" ]

[]

dhl

2010-09-23T05:12:14Z

false

true

7

GO:0080171

80,171

lytic vacuole organization

biological_process

A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a lytic vacuole.

[ "PMID:20729380" ]

null

[ "lytic vacuolar assembly", "lytic vacuole biogenesis", "lytic vacuole organisation", "lytic vacuole organization and biogenesis" ]

[ "NARROW", "RELATED", "EXACT", "RELATED" ]

[]

[ "GO:0007033" ]

[]

[ "GO:0007033" ]

[]

dhl

2011-04-25T04:40:46Z

false

true

1

GO:0080173

80,173

male-female gamete recognition during double fertilization forming a zygote and endosperm

biological_process

The initial contact step made between the male gamete and the female gamete during double fertilization forming a zygote and endosperm. An example can be found in Arabidopsis thaliana.

[ "PMID:21123745" ]

null

[ "gamete recognition", "male-female gamete recognition" ]

[ "BROAD", "EXACT" ]

[]

[ "GO:0009988", "GO:0022412" ]

[ "part_of GO:0061936" ]

[ "part_of" ]

[ "GO:0061936" ]

[ "GO:0009988", "GO:0022412", "GO:0061936" ]

[]

dhl

2011-04-26T04:58:58Z

false

true

2

GO:0080175

80,175

phragmoplast microtubule organization

biological_process

A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in phragmoplast, a plant cell specific structure that forms during late cytokinesis. Phragmoplast serves as a scaffold for cell...

[ "PMID:19383896" ]

null

[ "phragmoplast microtubule cytoskeleton organization", "phragmoplast microtubule organisation" ]

[ "EXACT", "EXACT" ]

[]

[ "GO:0000226" ]

[ "occurs_in GO:0009524" ]

[ "occurs_in" ]

[ "GO:0009524" ]

[ "GO:0000226", "GO:0009524" ]

[ "GO:0000226", "occurs_in GO:0009524" ]

[]

dhl

2011-04-28T03:54:11Z

false

true

1

GO:0080176

80,176

xyloglucan 1,6-alpha-xylosidase activity

molecular_function

Catalysis of the hydrolysis of xyloglucan side chains so as to remove unsubstituted D-xylose residues attached to the glucose located at the non-reducing terminus.

[ "PMID:20801759" ]

null

[]

[ "GO:0004553" ]

[]

[ "GO:0004553" ]

[]

dhl

2011-04-28T04:08:39Z

false

true

6

GO:0080177

80,177

plastoglobule organization

biological_process

A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the plastoglobule. Plastoglobule is a lipoprotein particle present in chloroplasts. They are rich in non-polar lipids (triglycerides, esters) as well as in prenylquinones, plastoquinone...

[ "PMID:20813909" ]

null

[ "plastoglobule organisation" ]

[ "EXACT" ]

[]

[ "GO:0016043" ]

[ "part_of GO:0009658" ]

[ "part_of" ]

[ "GO:0009658" ]

[ "GO:0009658", "GO:0016043" ]

[]

dhl

2011-04-28T04:13:07Z

false

true

5

GO:0080178

80,178

5-carbamoylmethyl uridine residue modification

biological_process

The chemical reactions and pathways involving the addition of a 5-carbamoylmethyl group to a uridine residue in RNA.

[ "GOC:dph", "GOC:tb" ]

null

[ "5-carbamoylmethyluridine metabolic process" ]

[ "RELATED" ]

[]

[ "GO:0030488" ]

[]

[ "GO:0030488" ]

[]

dhl

2011-04-28T04:36:23Z

false

true

9

GO:0080179

80,179

1-methylguanosine metabolic process

biological_process

The chemical reactions and pathways involving 1-methylguanosine.

[ "GOC:tb" ]

null

[]

[ "GO:0046128" ]

[]

[ "GO:0046128" ]

[]

dhl

2011-04-28T04:38:13Z

false

true

5

GO:0080181

80,181

lateral root branching

biological_process

Any process involved in the formation of branches in lateral roots.

[ "GOC:tb" ]

null

[]

[ "GO:0001763" ]

[ "part_of GO:0010102" ]

[ "part_of" ]

[ "GO:0010102" ]

[ "GO:0001763", "GO:0010102" ]

[]

dhl

2011-08-10T04:13:33Z

false

true

3

GO:0080182

80,182

obsolete histone H3-K4 trimethylation

biological_process

OBSOLETE. The modification of histone H3 by addition of three methyl groups to lysine at position 4 of the histone.

[ "GOC:BHF", "GOC:se", "GOC:tb" ]

This term was obsoleted because it represents a molecular function.

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/24294\" xsd:anyURI" ]

dhl

2011-08-10T04:18:36Z

true

3

GO:0080183

80,183

response to photooxidative stress

biological_process

Any process that results in a change in state or activity of a cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as the result of a photooxidative stress, the light-dependent generation of active oxygen species. The process begins with detection of the stimulus and ends with a...

[ "DOI:10.1111/j.1399-3054.1994.tb03042.x" ]

null

[]

[ "GO:0006979" ]

[]

[ "GO:0006979" ]

[]

dhl

2011-08-10T04:26:11Z

false

true

1

GO:0080184

80,184

response to phenylpropanoid

biological_process

Any process that results in a change in state or activity of a cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as the result of a phenylpropanoid stimulus. The process begins with detection of the stimulus and ends with a change in state or activity or the cell or organism. ...

[ "GOC:tb" ]

null

[]

[ "GO:0042221" ]

[]

[ "GO:0042221" ]

[]

dhl

2011-08-10T04:28:21Z

false

true

5

GO:0080185

80,185

effector-mediated activation of plant hypersensitive response by symbiont

biological_process

A symbiont process in which a molecule secreted by the symbiont activates a resistance gene-dependent defense response signaling pathway in the plant host, in order to activate a hypersensitive response to induce necrosis. In the plant, this process involves the direct or indirect recognition of the symbiont effector p...

[ "PMID:16497589", "PMID:22241993", "PMID:23411798", "PMID:27641772" ]

null

[ "activation by organism of defense response in host by specific elicitors", "activation by organism of host gene-for-gene resistance", "activation by organism of host resistance gene-dependent defense response", "activation by symbiont of host resistance gene-dependent defense response", "activation of HR",...

[ "BROAD", "EXACT", "EXACT", "EXACT", "NARROW", "NARROW", "RELATED", "EXACT", "BROAD", "RELATED", "RELATED", "RELATED", "RELATED", "RELATED", "BROAD", "EXACT", "BROAD", "BROAD", "EXACT", "RELATED", "RELATED", "BROAD", "EXACT", "RELATED", "EXACT", "EXACT" ]

[ "GO:0052101", "GO:0052286", "GO:0052423", "GO:0052527" ]

[]

[ "Wikipedia:Effector-triggered_immunity" ]

[ "GO:0034055", "GO:0052158" ]

[]

[ "GO:0034055", "GO:0052158" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/18694\" xsd:anyURI" ]

dhl

2011-08-10T04:33:53Z

false

true

7

GO:0080186

80,186

developmental vegetative growth

biological_process

The increase in size or mass of non-reproductive plant parts.

[ "PO:0007134" ]

null

[]

[ "GO:0048589" ]

[]

[ "GO:0048589" ]

[]

dhl

2011-08-17T03:45:53Z

false

true

8

GO:0080188

80,188

gene silencing by siRNA-directed DNA methylation

biological_process

A small RNA-based gene silencing process in which small interfering RNAs (siRNAs) guide DNA methylation to the siRNA-generating genomic loci and other loci that are homologous to the siRNAs for de novo DNA methylation. This results in a heterochromatin assembly, a chromatin conformation that is refractory to transcript...

[ "PMID:21420348", "PMID:33031395" ]

This process has been shown in plants and in yeasts, but so far has not been detected in vertebrates, organisms that lack RNA-dependent RNA polymerase.

[ "gene silencing by RNA-directed DNA methylation", "RdDM", "RNA-directed DNA methylation" ]

[ "RELATED", "EXACT", "RELATED" ]

[]

[ "GO:0006346", "GO:0141194" ]

[]

[ "GO:0006346", "GO:0141194" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/19328\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/22047\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/27238\" xsd:anyURI" ]

dhl

2012-05-22T02:22:50Z

false

true

8

GO:0080189

80,189

primary growth

biological_process

Growth of a plant structure from the time of its initiation by an apical meristem until its expansion is completed.

[ "ISBN:0471245208" ]

Has its inception in the apical meristems (PO:0020144) and continues in their derivative meristems - protoderm (PO:0006210) and procambium (PO:0025275) - even in older tissues. Primary and secondary growth can occur simultaneously in the same organism.

[]

[ "GO:0032501", "GO:0040007" ]

[]

[ "GO:0032501", "GO:0040007" ]

[]

dhl

2012-12-06T15:20:41Z

false

true

2

GO:0080191

80,191

secondary thickening

biological_process

Lateral growth of a plant axis (shoot axis or root) that is an increase in thickness resulting from formation of tissue from a secondary thickening meristem.

[ "JSTOR:4354165", "PO:0025004", "PO:0025414" ]

Occurs in shoot axes in some monocotyledons such as Dracaena, and rarely in roots of monocotyledons. Distinct from primary thickening, because it is distant from and generally discontinuous with the apical meristem.

[]

[ "GO:0080190" ]

[]

[ "GO:0080190" ]

[]

dhl

2012-12-06T15:50:33Z

false

true

5

GO:0080192

80,192

primary thickening

biological_process

Lateral growth of a plant axis (shoot axis or root) that is an increase in thickness resulting from the activity of a primary thickening meristem.

[ "ISBN:0471245208", "JSTOR:4354165", "PO:0005039", "PO:0025004" ]

Occurs in shoot axes and rarely in roots in many monocotyledons.

[]

[ "GO:0080190" ]

[]

[ "GO:0080190" ]

[]

dhl

2012-12-06T15:55:18Z

false

true

8

GO:0080193

80,193

diffuse secondary thickening

biological_process

Lateral growth of the older parts of a stem that occurs when the central parenchyma cells and the not yet fully differentiated fiber cells of the bundle sheaths continue to undergo cell division and expansion for a long period of time, leading to an increase in girth of the stem.

[ "GOC:dhl" ]

Occurs in the stems (PO:0009047) of some Arecaceae (palms).

[]

[ "GO:0080190" ]

[]

[ "GO:0080190" ]

[]

dhl

2012-12-06T15:57:50Z

false

true

5

GO:0085000

85,000

obsolete modification by symbiont of host morphology or physiology via protein secreted by type V secretion system

biological_process

OBSOLETE. The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by a type V secretion system in the organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.

[ "GOC:pamgo_curators" ]

This term was obsoleted because it conflated the process in which a gene product is involved with the secretion system by which it reaches its target.

[]

jl

2010-07-09T03:08:54Z

true

7

GO:0085001

85,001

formation of stylet for nutrient acquisition

biological_process

The assembly of a stylet, a hollow protrusible spear-like symbiont structure projected into the host cell for the purpose of obtaining nutrients. The host is defined as the larger of the organisms involved in a symbiotic interaction.

[ "GOC:pamgo_curators" ]

null

[ "formation by symbiont of stylet for nutrient acquisition from host" ]

[ "RELATED" ]

[]

[ "GO:0052093" ]

[]

[ "GO:0052093" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20305\" xsd:anyURI" ]

jl

2010-02-24T01:49:06Z

false

true

4

GO:0085002

85,002

obsolete interaction with host mediated by secreted substance released by symbiont from symbiotic structure

biological_process

OBSOLETE. An interaction with the host organism mediated by a symbiont secreted substance released by specialized structures generated in either organisms as a result of the symbiotic interaction. The term host is used for the larger (macro) of the two members of a symbiosis.

[ "GOC:pamgo_curators" ]

This term was obsoleted because it conflated the process in which a gene product is involved with the secretion system by which it reaches its target.

[]

jl

2010-02-10T02:38:10Z

true

1

GO:0085003

85,003

obsolete interaction with host via secreted substance released from stylet

biological_process

OBSOLETE. An interaction with the host organism mediated by a substance released by the other (symbiont) organism via the stylet, a hollow protrusible spear-like structure in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.

[ "GOC:pamgo_curators" ]

This term was deprecated because it conflated the process in which a gene product is involved with the secretion system by which it reaches its target.

[]

jl

2010-02-10T02:53:56Z

true

1

GO:0085005

85,005

obsolete interaction with host via secreted substance released from invasive hyphae

biological_process

OBSOLETE. An interaction with the host organism mediated by a substance released by the other (symbiont) organism via invasive hyphae. The host is defined as the larger of the organisms involved in a symbiotic interaction.

[ "GOC:pamgo_curators" ]

This term was deprecated because it conflated the process in which a gene product is involved with the secretion system by which it reaches its target.

[]

jl

2010-02-10T02:59:51Z

true

1

GO:0085006

85,006

obsolete interaction with host mediated by symbiont secreted substance released from symbiont-containing vacuole

biological_process

OBSOLETE. An interaction with the host organism mediated by a substance released by the other (symbiont) organism via a symbiont-containing vacuole, a specialized sac within the host in which the symbiont resides. The host is defined as the larger of the organisms involved in a symbiotic interaction.

[ "GOC:pamgo_curators" ]

This term was deprecated because it conflated the process in which a gene product is involved with the secretion system by which it reaches its target.

[ "interaction with host mediated by symbiont secreted substance released from parasitophorous vacuole" ]

[ "EXACT" ]

[]

jl

2010-02-10T03:00:56Z

true

5

GO:0085007

85,007

obsolete interaction with host via secreted substance released from rhoptry

biological_process

OBSOLETE. An interaction with the host organism mediated by a substance released by the other (symbiont) organism via the rhoptry, a large, club-shaped secretory organelle that forms part of the apical complex of an apicomplexan parasite. The host is defined as the larger of the organisms involved in a symbiotic intera...

[ "GOC:pamgo_curators" ]

This term was deprecated because it conflated the process in which a gene product is involved with the secreaton system by which it reaches its target.

[]

jl

2010-02-10T03:02:08Z

true

4

GO:0085008

85,008

obsolete interaction with host via secreted substance released from microneme

biological_process

OBSOLETE. An interaction with the host organism mediated by a substance released by the other (symbiont) organism via the microneme, a small, elongated secretory organelle that forms part of the apical complex of an apicomplexan parasite. The host is defined as the larger of the organisms involved in a symbiotic intera...

[ "GOC:pamgo_curators" ]

This term was deprecated because it conflated the process in which a gene product is involved with the secretion system by which it reaches its target.

[]

jl

2010-02-10T03:03:16Z

true

6

GO:0085010

85,010

obsolete interaction with host mediated by secreted substance entering host via endocytosis

biological_process

OBSOLETE. An interaction with the host organism mediated by a secreted substance from the symbiont entering host cells via endocytosis of the substance. The host is defined as the larger of the organisms involved in a symbiotic interaction.

[ "GOC:pamgo_curators" ]

This term was obsoleted because it conflated the process in which a gene product is involved with the secretion system by which it reaches its target.

[]

jl

2010-02-10T03:12:31Z

true

3

GO:0085011

85,011

obsolete interaction with host via protein secreted by Sec complex

biological_process

OBSOLETE. An interaction with the host organism mediated by a substance secreted by the symbiont organism by a Sec complex. The host is defined as the larger of the organisms involved in a symbiotic interaction.

[ "GOC:pamgo_curators" ]

This term was obsoleted because it conflated the process in which a gene product is involved with the secretion system by which it reaches its target.

[ "interaction with host via protein secreted by Sec secretion system" ]

[ "EXACT" ]

[]

jl

2010-02-10T03:18:36Z

true

8

GO:0085012

85,012

obsolete interaction with host via protein secreted by Tat complex

biological_process

OBSOLETE. An interaction with the host organism mediated by a substance secreted by the symbiont organism by a Tat complex. The host is defined as the larger of the organisms involved in a symbiotic interaction.

[ "GOC:pamgo_curators" ]

This term was obsoleted because it conflated the process in which a gene product is involved with the secretion system by which it reaches its target.

[ "interaction with host via protein secreted by Tat secretion system" ]

[ "EXACT" ]

[]

jl

2010-02-10T03:29:37Z

true

7

GO:0085014

85,014

dormancy entry of symbiont in host

biological_process

Entry into a dormant state of the symbiont within the host organism.

[ "GOC:jl" ]

null

[]

[ "GO:0022611", "GO:0044114" ]

[]

[ "GO:0022611", "GO:0044114" ]

[]

jl

2010-05-19T02:33:26Z

false

true

7

GO:0085015

85,015

dormancy maintenance of symbiont in host

biological_process

Any process in which a dormant state is maintained by the symbiont within the host organism.

[ "GOC:jl" ]

null

[ "non-replicating persistence", "NRP" ]

[ "EXACT", "EXACT" ]

[]

[ "GO:0022611", "GO:0044114" ]

[]

[ "GO:0022611", "GO:0044114" ]

[]

jl

2010-05-19T03:17:32Z

false

true

1

GO:0085016

85,016

dormancy exit of symbiont in host

biological_process

Exit from dormant state, also known as resuscitation, of the symbiont within the host organism.

[ "GOC:jl" ]

null

[ "resuscitation of symbiont" ]

[ "EXACT" ]

[]

[ "GO:0022611", "GO:0044114" ]

[]

[ "GO:0022611", "GO:0044114" ]

[]

jl

2010-05-19T03:23:07Z

false

true

1

GO:0085017

85,017

entry into host cell by a symbiont-containing vacuole

biological_process

The invasion by a symbiont of a cell of a host organism, forming a vacuole in which the symbiont resides. The vacuole membrane is formed from lipids and proteins derived from both host and symbiont. Begins when the symbiont attaches on to the host cell membrane which invaginates and deepens as the symbiont enters, and ...

[ "GOC:jl", "PMID:18665841", "PMID:8690024", "PMID:9580555" ]

null

[ "symbiont entry into host cell forming a parasitophorous vacuole", "symbiont entry into host cell forming a pathogen-containing vacuole", "symbiont entry into host cell forming a symbiont-containing vacuole" ]

[ "EXACT", "EXACT", "RELATED" ]

[ "GO:0052370" ]

[]

[ "GO:0046718" ]

[]

[ "GO:0046718" ]

[]

jl

2010-05-20T02:55:34Z

false

true

1

GO:0085018

85,018

obsolete maintenance of symbiont-containing vacuole by host

biological_process

OBSOLETE. The process in which a host organism maintains the structure and function of a symbiont-containing vacuole. The symbiont-containing vacuole is a membrane-bounded vacuole within a host cell in which a symbiont organism resides, and can serve to reduce pathogenicity of invading symbionts by restricting them to ...

[ "GOC:jl", "GOC:yaf", "PMID:18665841" ]

This term has been obsoleted because there is no evidence that this process exists.

[ "maintenance of parasitophorous vacuole", "maintenance of pathogen-containing vacuole", "maintenance of vacuolar integrity during bacterial infection" ]

[ "EXACT", "EXACT", "NARROW" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/21742\" xsd:anyURI" ]

jl

2010-05-20T03:58:51Z

true

4

GO:0085019

85,019

formation of tubovesicular network for nutrient acquisition

biological_process

The assembly of a symbiont-induced complex organelle that comprises of multiple protein and lipid domains for the purpose of obtaining nutrients from its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.

[ "GOC:pamgo_curators" ]

null

[ "formation by symbiont of a tubovesicular network for nutrient acquisition from host", "formation of a symbiont- induced tubovesicular network for nutrient acquisition from host" ]

[ "RELATED", "EXACT" ]

[]

[ "GO:0052093" ]

[]

[ "GO:0052093" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20305\" xsd:anyURI" ]

jl

2010-05-20T04:29:24Z

false

true

1

GO:0085020

85,020

protein K6-linked ubiquitination

biological_process

A protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 6 of the ubiquitin monomers, is added to a protein. K6-linked ubiquitination is involved in DNA repair.

[ "GOC:sp" ]

null

[ "protein K6-linked polyubiquitination" ]

[ "EXACT" ]

[]

[ "GO:0000209" ]

[]

[ "GO:0000209" ]

[]

jl

2010-06-01T03:05:03Z

false

true

5

GO:0085021

85,021

obsolete modification by symbiont of host morphology or physiology via protein secreted by type I secretion system

biological_process

OBSOLETE. The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by a type I secretion system in the organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.

[ "GOC:pamgo_curators" ]

This term was obsoleted because it conflated the process in which a gene product is involved with the secretion system by which it reaches its target.

[]

jl

2010-07-09T03:20:44Z

true

8