LiteFold/GO · Datasets at Hugging Face

GO:0090323

90,323

obsolete prostaglandin secretion involved in immune response

biological_process

OBSOLETE. The regulated release of a prostaglandin that contributes to the immune response. Prostaglandins are a group of biologically active metabolites which contain a cyclopentane ring.

[ "GOC:dph", "GOC:tb" ]

This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31306\" xsd:anyURI" ]

tb

2010-05-12T10:41:04Z

true

5

GO:0090324

90,324

negative regulation of oxidative phosphorylation

biological_process

Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the phosphorylation of ADP to ATP that accompanies the oxidation of a metabolite through the operation of the respiratory chain. Oxidation of compounds establishes a proton gradient across the membrane, providin...

[ "GOC:BHF" ]

null

[]

[ "GO:0002082", "GO:1901856" ]

[ "negatively_regulates GO:0006119" ]

[ "negatively_regulates" ]

[ "GO:0006119" ]

[ "GO:0002082", "GO:0006119", "GO:1901856" ]

[ "GO:0065007", "negatively_regulates GO:0006119" ]

[]

tb

2010-05-14T10:21:33Z

false

true

4

GO:0090325

90,325

regulation of locomotion involved in locomotory behavior

biological_process

Any process that modulates the frequency, rate, or extent of the self-propelled movement of a cell or organism from one location to another in a behavioral context; the aspect of locomotory behavior having to do with movement.

[ "GOC:dph", "GOC:kmv", "GOC:tb" ]

null

[]

[ "GO:0040012", "GO:0050795" ]

[ "regulates GO:0031987" ]

[ "regulates" ]

[ "GO:0031987" ]

[ "GO:0031987", "GO:0040012", "GO:0050795" ]

[ "GO:0065007", "regulates GO:0031987" ]

[]

tb

2010-05-14T10:24:29Z

false

true

8

GO:0090326

90,326

positive regulation of locomotion involved in locomotory behavior

biological_process

Any process that increases the frequency, rate, or extent of the self-propelled movement of a cell or organism from one location to another in a behavioral context; the aspect of locomotory behavior having to do with movement.

[ "GOC:dph", "GOC:kmv", "GOC:tb" ]

null

[]

[ "GO:0040017", "GO:0048520", "GO:0090325" ]

[ "positively_regulates GO:0031987" ]

[ "positively_regulates" ]

[ "GO:0031987" ]

[ "GO:0031987", "GO:0040017", "GO:0048520", "GO:0090325" ]

[ "GO:0050789", "positively_regulates GO:0031987" ]

[]

tb

2010-05-14T10:26:58Z

false

true

2

GO:0090327

90,327

negative regulation of locomotion involved in locomotory behavior

biological_process

Any process that decreases the frequency, rate, or extent of the self-propelled movement of a cell or organism from one location to another in a behavioral context; the aspect of locomotory behavior having to do with movement.

[ "GOC:dph", "GOC:kmv", "GOC:tb" ]

null

[]

[ "GO:0040013", "GO:0048521", "GO:0090325" ]

[ "negatively_regulates GO:0031987" ]

[ "negatively_regulates" ]

[ "GO:0031987" ]

[ "GO:0031987", "GO:0040013", "GO:0048521", "GO:0090325" ]

[ "GO:0065007", "negatively_regulates GO:0031987" ]

[]

tb

2010-05-14T10:26:58Z

false

true

6

GO:0090329

90,329

regulation of DNA-templated DNA replication

biological_process

Any process that modulates the rate, frequency, or extent of DNA-templated DNA replication, the process in which new strands of DNA are synthesized.

[ "GOC:dph", "GOC:tb" ]

null

[ "regulation of DNA-dependent DNA replication" ]

[ "EXACT" ]

[]

[ "GO:0006275" ]

[ "regulates GO:0006261" ]

[ "regulates" ]

[ "GO:0006261" ]

[ "GO:0006261", "GO:0006275" ]

[ "GO:0065007", "regulates GO:0006261" ]

[]

tb

2010-05-14T10:42:04Z

false

true

2

GO:0090330

90,330

regulation of platelet aggregation

biological_process

Any process that modulates the rate, frequency or extent of platelet aggregation. Platelet aggregation is the adhesion of one platelet to one or more other platelets via adhesion molecules.

[ "GOC:dph", "GOC:tb" ]

null

[]

[ "GO:0010543", "GO:0034110" ]

[ "regulates GO:0070527" ]

[ "regulates" ]

[ "GO:0070527" ]

[ "GO:0010543", "GO:0034110", "GO:0070527" ]

[ "GO:0065007", "regulates GO:0070527" ]

[]

tb

2010-05-14T10:46:08Z

false

true

4

GO:0090331

90,331

negative regulation of platelet aggregation

biological_process

Any process that decreases the rate, frequency or extent of platelet aggregation. Platelet aggregation is the adhesion of one platelet to one or more other platelets via adhesion molecules.

[ "GOC:BHF" ]

null

[ "platelet disaggregation" ]

[ "NARROW" ]

[]

[ "GO:0010544", "GO:0034111", "GO:0090330" ]

[ "negatively_regulates GO:0070527" ]

[ "negatively_regulates" ]

[ "GO:0070527" ]

[ "GO:0010544", "GO:0034111", "GO:0070527", "GO:0090330" ]

[ "GO:0065007", "negatively_regulates GO:0070527" ]

[]

tb

2010-05-14T10:46:08Z

false

true

8

GO:0090332

90,332

stomatal closure

biological_process

The process of closing of stomata, pores in the epidermis of leaves and stems bordered by two guard cells and serving in gas exchange.

[ "GOC:tb" ]

null

[]

[ "GO:0010118" ]

[]

[ "GO:0010118" ]

[]

tb

2010-05-26T02:14:49Z

false

true

5

GO:0090333

90,333

regulation of stomatal closure

biological_process

Any process that modulates the rate, frequency, or extent of stomatal closure. Stomatal closure is the process of closing of stomata, pores in the epidermis of leaves and stems bordered by two guard cells and serving in gas exchange.

[ "GOC:tb" ]

null

[]

[ "GO:0010119" ]

[ "regulates GO:0090332" ]

[ "regulates" ]

[ "GO:0090332" ]

[ "GO:0010119", "GO:0090332" ]

[]

tb

2010-05-26T02:14:49Z

false

true

4

GO:0090334

90,334

regulation of cell wall (1->3)-beta-D-glucan biosynthetic process

biological_process

Any process that modulates the rate, frequency, or extent of the chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds, found in the walls of cells.

[ "GOC:tb" ]

null

[ "regulation of cell wall 1,3-beta-D-glucan biosynthetic process", "regulation of cell wall 1,3-beta-glucan biosynthetic process" ]

[ "BROAD", "BROAD" ]

[]

[ "GO:0010981", "GO:0032953", "GO:1903338" ]

[ "regulates GO:0034411" ]

[ "regulates" ]

[ "GO:0034411" ]

[ "GO:0010981", "GO:0032953", "GO:0034411", "GO:1903338" ]

[ "GO:0065007", "regulates GO:0034411" ]

[]

tb

2010-06-01T03:11:34Z

false

true

3

GO:0090335

90,335

regulation of brown fat cell differentiation

biological_process

Any process that modulates the rate, frequency, or extent of brown fat cell differentiation. Brown fat cell differentiation is the process in which a relatively unspecialized cell acquires specialized features of a brown adipocyte, an animal connective tissue cell involved in adaptive thermogenesis. Brown adipocytes co...

[ "GOC:tb" ]

null

[]

[ "Reactome:R-HSA-9843743 \"Transcriptional regulation of brown and beige adipocyte differentiation\"" ]

[ "GO:0045598" ]

[ "regulates GO:0050873" ]

[ "regulates" ]

[ "GO:0050873" ]

[ "GO:0045598", "GO:0050873" ]

[ "GO:0065007", "regulates GO:0050873" ]

[]

tb

2010-06-01T03:16:57Z

false

true

3

GO:0090336

90,336

positive regulation of brown fat cell differentiation

biological_process

Any process that increases the rate, frequency, or extent of brown fat cell differentiation. Brown fat cell differentiation is the process in which a relatively unspecialized cell acquires specialized features of a brown adipocyte, an animal connective tissue cell involved in adaptive thermogenesis. Brown adipocytes co...

[ "GOC:BHF" ]

null

[]

[ "GO:0045600", "GO:0090335" ]

[ "positively_regulates GO:0050873" ]

[ "positively_regulates" ]

[ "GO:0050873" ]

[ "GO:0045600", "GO:0050873", "GO:0090335" ]

[ "GO:0065007", "positively_regulates GO:0050873" ]

[]

tb

2010-06-01T03:19:26Z

false

true

6

GO:0090337

90,337

regulation of formin-nucleated actin cable assembly

biological_process

Any process that modulates the rate, frequency, or extent of formin-nucleated actin cable assembly. Formin-nucleated actin cable assembly is the aggregation, arrangement and bonding together of a set of components to form a formin-nucleated actin cable. A formin-nucleated actin cable is an actin filament bundle that co...

[ "GOC:jh", "GOC:tb", "PMID:12810699", "PMID:15923184" ]

null

[]

[ "GO:0032231" ]

[ "regulates GO:0070649" ]

[ "regulates" ]

[ "GO:0070649" ]

[ "GO:0032231", "GO:0070649" ]

[ "GO:0065007", "regulates GO:0070649" ]

[]

tb

2010-06-01T03:26:31Z

false

true

5

GO:0090338

90,338

positive regulation of formin-nucleated actin cable assembly

biological_process

Any process that increases the rate, frequency, or extent of formin-nucleated actin cable assembly. Formin-nucleated actin cable assembly is the aggregation, arrangement and bonding together of a set of components to form a formin-nucleated actin cable. A formin-nucleated actin cable is an actin filament bundle that co...

[ "GOC:jh", "GOC:tb", "PMID:12810699", "PMID:15923184" ]

null

[]

[ "GO:0032233", "GO:0090337" ]

[ "positively_regulates GO:0070649" ]

[ "positively_regulates" ]

[ "GO:0070649" ]

[ "GO:0032233", "GO:0070649", "GO:0090337" ]

[ "GO:0065007", "positively_regulates GO:0070649" ]

[]

tb

2010-06-01T03:26:31Z

false

true

9

GO:0090339

90,339

negative regulation of formin-nucleated actin cable assembly

biological_process

Any process that decreases the rate, frequency, or extent of formin-nucleated actin cable assembly. Formin-nucleated actin cable assembly is the aggregation, arrangement and bonding together of a set of components to form a formin-nucleated actin cable. A formin-nucleated actin cable is an actin filament bundle that co...

[ "GOC:jh", "GOC:tb", "PMID:12810699", "PMID:15923184" ]

null

[]

[ "GO:0032232", "GO:0090337" ]

[ "negatively_regulates GO:0070649" ]

[ "negatively_regulates" ]

[ "GO:0070649" ]

[ "GO:0032232", "GO:0070649", "GO:0090337" ]

[ "GO:0065007", "negatively_regulates GO:0070649" ]

[]

tb

2010-06-01T03:26:31Z

false

true

3

GO:0090341

90,341

negative regulation of secretion of lysosomal enzymes

biological_process

Any process that decreases the rate, frequency or extent of secretion of lysosomal enzymes, the controlled release of lysosomal enzymes by a cell.

[ "GOC:BHF" ]

null

[]

[ "GO:0050709", "GO:0090182" ]

[ "negatively_regulates GO:0033299" ]

[ "negatively_regulates" ]

[ "GO:0033299" ]

[ "GO:0033299", "GO:0050709", "GO:0090182" ]

[ "GO:0065007", "negatively_regulates GO:0033299" ]

[]

tb

2010-06-01T03:35:57Z

false

true

5

GO:0090342

90,342

obsolete regulation of cell aging

biological_process

OBSOLETE. Any process that modulates the rate, frequency, or extent of cell aging. Cell aging is the progression of the cell from its inception to the end of its lifespan.

[ "GOC:BHF", "GOC:dph", "GOC:tb" ]

This term was obsoleted because it represents a phenotype.

[]

[ "GO:2000772" ]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/22788\" xsd:anyURI" ]

tb

2010-06-02T10:12:37Z

true

7

GO:0090343

90,343

obsolete positive regulation of cell aging

biological_process

OBSOLETE. Any process that increases the rate, frequency, or extent of cell aging. Cell aging is the progression of the cell from its inception to the end of its lifespan.

[ "GOC:BHF", "GOC:dph", "GOC:tb" ]

This term was obsoleted because it represents a phenotype.

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/22788\" xsd:anyURI" ]

tb

2010-06-02T10:12:37Z

true

9

GO:0090344

90,344

obsolete negative regulation of cell aging

biological_process

OBSOLETE. Any process that decreases the rate, frequency, or extent of cell aging. Cell aging is the progression of the cell from its inception to the end of its lifespan.

[ "GOC:BHF", "GOC:dph", "GOC:tb" ]

This term was obsoleted because it represents a phenotype.

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/22788\" xsd:anyURI" ]

tb

2010-06-02T10:12:37Z

true

1

GO:0090346

90,346

organofluorine metabolic process

biological_process

The chemical reactions and pathways involving organofluorine compounds, as carried out by individual cells.

[ "GOC:BHF" ]

null

[]

[ "GO:0090345" ]

[]

[ "GO:0090345" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/28908\" xsd:anyURI" ]

tb

2010-06-02T10:36:42Z

false

true

4

GO:0090347

90,347

regulation of organohalogen metabolic process

biological_process

Any process that modulates the rate, frequency or extent of the chemical reactions and pathways involving organohalogen compounds, as carried out by individual cells.

[ "GOC:BHF" ]

null

[]

[ "GO:0019222" ]

[ "regulates GO:0090345" ]

[ "regulates" ]

[ "GO:0090345" ]

[ "GO:0019222", "GO:0090345" ]

[ "GO:0065007", "regulates GO:0090345" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/28908\" xsd:anyURI" ]

tb

2010-06-02T10:36:42Z

false

true

1

GO:0090349

90,349

obsolete negative regulation of organohalogen metabolic process

biological_process

OBSOLETE. Any process that decreases the rate, frequency or extent of the chemical reactions and pathways involving organohalogen compounds, as carried out by individual cells.

[ "GOC:BHF" ]

This term was obsoleted because it is an unnecessary grouping class.

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/28908\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30570\" xsd:anyURI" ]

tb

2010-06-02T10:36:42Z

true

7

GO:0090350

90,350

negative regulation of organofluorine metabolic process

biological_process

Any process that decreases the rate, frequency or extent of the chemical reactions and pathways involving organofluorine compounds, as carried out by individual cells.

[ "GOC:BHF" ]

null

[]

[ "GO:0009892", "GO:0090347" ]

[ "negatively_regulates GO:0090346" ]

[ "negatively_regulates" ]

[ "GO:0090346" ]

[ "GO:0009892", "GO:0090346", "GO:0090347" ]

[ "GO:0065007", "negatively_regulates GO:0090346" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/28908\" xsd:anyURI" ]

tb

2010-06-02T10:36:42Z

false

true

6

GO:0090351

90,351

seedling development

biological_process

The process whose specific outcome is the progression of the seedling over time, beginning with seed germination and ending when the first adult leaves emerge.

[ "GOC:tb", "PO:0007131" ]

null

[]

[ "PO:0008037" ]

[ "GO:0009791" ]

[]

[ "GO:0009791" ]

[]

tb

2010-06-10T03:33:10Z

false

true

8

GO:0090352

90,352

regulation of nitrate assimilation

biological_process

Any process that modulates the rate, frequency, or extent of the uptake, from the environment, of nitrates, inorganic or organic salts and esters of nitric acid and the subsequent reduction of nitrate ion to other, less highly oxidized, inorganic nitrogenous substances.

[ "GOC:tb" ]

null

[]

[ "GO:0062012", "GO:1903314" ]

[ "regulates GO:0042128" ]

[ "regulates" ]

[ "GO:0042128" ]

[ "GO:0042128", "GO:0062012", "GO:1903314" ]

[ "GO:0065007", "regulates GO:0042128" ]

[]

tb

2010-06-10T04:11:13Z

false

true

6

GO:0090353

90,353

polygalacturonase inhibitor activity

molecular_function

Binds to and stops, prevents or reduces the activity of polygalacturonase.

[ "GOC:tb" ]

null

[]

[ "GO:0004857" ]

[ "negatively_regulates GO:0004650" ]

[ "negatively_regulates" ]

[ "GO:0004650" ]

[ "GO:0004650", "GO:0004857" ]

[]

tb

2010-06-15T04:19:49Z

false

true

7

GO:0090354

90,354

regulation of auxin metabolic process

biological_process

Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving auxins, plant hormones that regulate aspects of plant growth.

[ "GOC:tb" ]

null

[ "regulation of auxin metabolism" ]

[ "EXACT" ]

[]

[ "GO:0032350" ]

[ "regulates GO:0009850" ]

[ "regulates" ]

[ "GO:0009850" ]

[ "GO:0009850", "GO:0032350" ]

[ "GO:0065007", "regulates GO:0009850" ]

[]

tb

2010-06-29T01:51:18Z

false

true

1

GO:0090355

90,355

positive regulation of auxin metabolic process

biological_process

Any process that increases the frequency, rate or extent of the chemical reactions and pathways involving auxins, plant hormones that regulate aspects of plant growth.

[ "GOC:tb" ]

null

[ "positive regulation of auxin metabolism" ]

[ "EXACT" ]

[]

[ "GO:0032352", "GO:0090354" ]

[ "positively_regulates GO:0009850" ]

[ "positively_regulates" ]

[ "GO:0009850" ]

[ "GO:0009850", "GO:0032352", "GO:0090354" ]

[ "GO:0065007", "positively_regulates GO:0009850" ]

[]

tb

2010-06-29T01:51:18Z

false

true

8

GO:0090356

90,356

negative regulation of auxin metabolic process

biological_process

Any process that decreases the frequency, rate or extent of the chemical reactions and pathways involving auxins, plant hormones that regulate aspects of plant growth.

[ "GOC:tb" ]

null

[ "negative regulation of auxin metabolism" ]

[ "EXACT" ]

[]

[ "GO:0032351", "GO:0090354" ]

[ "negatively_regulates GO:0009850" ]

[ "negatively_regulates" ]

[ "GO:0009850" ]

[ "GO:0009850", "GO:0032351", "GO:0090354" ]

[ "GO:0065007", "negatively_regulates GO:0009850" ]

[]

tb

2010-06-29T01:51:18Z

false

true

3

GO:0090357

90,357

obsolete regulation of L-tryptophan metabolic process

biological_process

OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.

[ "GOC:tb" ]

The reason for obsoletion is that this term was an unnecessary grouping terms and only 'biosynthetic' or 'catabolic' process should be used.

[ "regulation of tryptophan metabolic process", "regulation of tryptophan metabolism" ]

[ "RELATED", "EXACT" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31171\" xsd:anyURI" ]

tb

2010-06-29T02:38:48Z

true

7

GO:0090358

90,358

obsolete positive regulation of L-tryptophan metabolic process

biological_process

OBSOLETE. Any process that increases the frequency, rate or extent of the chemical reactions and pathways involving tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.

[ "GOC:tb" ]

The reason for obsoletion is that this term was an unnecessary grouping terms and only 'biosynthetic' or 'catabolic' process should be used.

[ "positive regulation of tryptophan metabolic process", "positive regulation of tryptophan metabolism" ]

[ "RELATED", "EXACT" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31171\" xsd:anyURI" ]

tb

2010-06-29T02:38:48Z

true

2

GO:0090359

90,359

negative regulation of abscisic acid biosynthetic process

biological_process

Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of abscisic acid.

[ "GOC:tb" ]

null

[ "negative regulation of abscisic acid biosynthesis" ]

[ "EXACT" ]

[]

[ "GO:0010115", "GO:0045827", "GO:0051055", "GO:1902931" ]

[ "negatively_regulates GO:0009688" ]

[ "negatively_regulates" ]

[ "GO:0009688" ]

[ "GO:0009688", "GO:0010115", "GO:0045827", "GO:0051055", "GO:1902931" ]

[ "GO:0065007", "negatively_regulates GO:0009688" ]

[]

tb

2010-06-29T02:47:12Z

false

true

7

GO:0090360

90,360

platelet-derived growth factor production

biological_process

The appearance of any platelet-derived growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.

[ "GOC:BHF" ]

Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select one of the 'regulation' children terms.

[]

[ "gocheck_do_not_annotate" ]

[]

[ "GO:0001816" ]

[]

[ "GO:0001816" ]

[]

tb

2010-07-12T10:32:27Z

false

true

6

GO:0090361

90,361

regulation of platelet-derived growth factor production

biological_process

Any process that modulates the rate, frequency, or extent of the appearance of any platelet-derived growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.

[ "GOC:BHF" ]

null

[]

[ "GO:0001817" ]

[ "regulates GO:0090360" ]

[ "regulates" ]

[ "GO:0090360" ]

[ "GO:0001817", "GO:0090360" ]

[ "GO:0065007", "regulates GO:0090360" ]

[]

tb

2010-07-12T10:32:27Z

false

true

3

GO:0090362

90,362

positive regulation of platelet-derived growth factor production

biological_process

Any process that increases the rate, frequency, or extent of the appearance of any platelet-derived growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.

[ "GOC:BHF" ]

null

[]

[ "GO:0001819", "GO:0090361" ]

[ "positively_regulates GO:0090360" ]

[ "positively_regulates" ]

[ "GO:0090360" ]

[ "GO:0001819", "GO:0090360", "GO:0090361" ]

[ "GO:0065007", "positively_regulates GO:0090360" ]

[]

tb

2010-07-12T10:32:27Z

false

true

6

GO:0090363

90,363

obsolete regulation of proteasome core complex assembly

biological_process

OBSOLETE. Any process that modulates the rate, frequency, or extent of the aggregation, arrangement and bonding together of a mature, active 20S proteasome core particle complex that does not contain any regulatory particles.

[ "GOC:dph", "GOC:elh", "GOC:tb" ]

This term was obsoleted because was too specific.

[]

[ "GO:0043248" ]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20017\" xsd:anyURI" ]

tb

2010-07-12T10:48:57Z

true

4

GO:0090364

90,364

regulation of proteasome assembly

biological_process

Any process that modulates the rate, frequency, or extent of the aggregation, arrangement and bonding together of a mature, active proteasome complex.

[ "GOC:dph", "GOC:elh", "GOC:tb" ]

null

[]

[ "GO:0043254" ]

[ "regulates GO:0043248" ]

[ "regulates" ]

[ "GO:0043248" ]

[ "GO:0043248", "GO:0043254" ]

[ "GO:0065007", "regulates GO:0043248" ]

[]

tb

2010-07-12T10:55:21Z

false

true

7

GO:0090365

90,365

regulation of mRNA modification

biological_process

Any process that modulates the rate, frequency, or extent of the covalent alteration of one or more nucleotides within an mRNA molecule to produce an mRNA molecule with a sequence that differs from that coded genetically.

[ "GOC:dph", "GOC:sl", "GOC:tb", "PMID:14559896" ]

null

[ "regulation of mRNA editing" ]

[ "NARROW" ]

[]

[ "GO:1903311" ]

[ "regulates GO:0016556" ]

[ "regulates" ]

[ "GO:0016556" ]

[ "GO:0016556", "GO:1903311" ]

[ "GO:0065007", "regulates GO:0016556" ]

[]

tb

2010-07-12T11:04:45Z

false

true

1

GO:0090366

90,366

positive regulation of mRNA modification

biological_process

Any process that increases the rate, frequency, or extent of the covalent alteration of one or more nucleotides within an mRNA molecule to produce an mRNA molecule with a sequence that differs from that coded genetically.

[ "GOC:dph", "GOC:sl", "GOC:tb" ]

null

[]

[ "GO:0090365", "GO:1903313" ]

[ "positively_regulates GO:0016556" ]

[ "positively_regulates" ]

[ "GO:0016556" ]

[ "GO:0016556", "GO:0090365", "GO:1903313" ]

[ "GO:0065007", "positively_regulates GO:0016556" ]

[]

tb

2010-07-12T11:04:45Z

false

true

4

GO:0090367

90,367

negative regulation of mRNA modification

biological_process

Any process that decreases the rate, frequency, or extent of the covalent alteration of one or more nucleotides within an mRNA molecule to produce an mRNA molecule with a sequence that differs from that coded genetically.

[ "GOC:dph", "GOC:sl", "GOC:tb" ]

null

[]

[ "GO:0090365", "GO:1903312" ]

[ "negatively_regulates GO:0016556" ]

[ "negatively_regulates" ]

[ "GO:0016556" ]

[ "GO:0016556", "GO:0090365", "GO:1903312" ]

[ "GO:0065007", "negatively_regulates GO:0016556" ]

[]

tb

2010-07-12T11:04:45Z

false

true

4

GO:0090368

90,368

obsolete regulation of ornithine metabolic process

biological_process

OBSOLETE. Any process that modulates the rate, frequency, or extent of the chemical reactions and pathways involving ornithine, an amino acid only rarely found in proteins, but which is important in living organisms as an intermediate in the reactions of the urea cycle and in arginine biosynthesis.

[ "GOC:dph", "GOC:jp", "GOC:tb" ]

The reason for obsoletion is that this term was an unnecessary grouping terms and only 'biosynthetic' or 'catabolic' process should be used.

[]

[ "Reactome:R-HSA-350562 \"Regulation of ornithine decarboxylase (ODC)\"" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31171\" xsd:anyURI" ]

tb

2010-07-12T11:14:12Z

true

1

GO:0090369

90,369

ornithine carbamoyltransferase inhibitor activity

molecular_function

Binds to and stops, prevents, or reduces the activity of ornithine carbamoyltransferase.

[ "GOC:dph", "GOC:jp", "GOC:tb" ]

null

[]

[ "GO:0004857" ]

[ "negatively_regulates GO:0004585" ]

[ "negatively_regulates" ]

[ "GO:0004585" ]

[ "GO:0004585", "GO:0004857" ]

[]

tb

2010-07-12T11:19:55Z

false

true

1

GO:0090370

90,370

negative regulation of cholesterol efflux

biological_process

Any process that decreases the frequency, rate or extent of cholesterol efflux. Cholesterol efflux is the directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle.

[ "GOC:dph", "GOC:tb", "GOC:yaf" ]

null

[]

[ "GO:0010874", "GO:0032375" ]

[ "negatively_regulates GO:0033344" ]

[ "negatively_regulates" ]

[ "GO:0033344" ]

[ "GO:0010874", "GO:0032375", "GO:0033344" ]

[ "GO:0065007", "negatively_regulates GO:0033344" ]

[]

tb

2010-07-12T11:26:04Z

false

true

3

GO:0090372

90,372

positive regulation of glycerol transport

biological_process

Any process that increases the rate, frequency, or extent of the directed movement of glycerol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

[ "GOC:dph", "GOC:jh", "GOC:tb" ]

null

[]

[ "GO:0034764", "GO:0090371" ]

[ "positively_regulates GO:0015793" ]

[ "positively_regulates" ]

[ "GO:0015793" ]

[ "GO:0015793", "GO:0034764", "GO:0090371" ]

[ "GO:0065007", "positively_regulates GO:0015793" ]

[]

tb

2010-07-12T11:30:22Z

false

true

9

GO:0090373

90,373

negative regulation of glycerol transport

biological_process

Any process that decreases the rate, frequency, or extent of the directed movement of glycerol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

[ "GOC:dph", "GOC:jh", "GOC:tb" ]

null

[]

[ "GO:0034763", "GO:0090371" ]

[ "negatively_regulates GO:0015793" ]

[ "negatively_regulates" ]

[ "GO:0015793" ]

[ "GO:0015793", "GO:0034763", "GO:0090371" ]

[ "GO:0065007", "negatively_regulates GO:0015793" ]

[]

tb

2010-07-12T11:30:22Z

false

true

4

GO:0090374

90,374

oligopeptide export from mitochondrion

biological_process

The process in which an oligopeptide is transported out of the mitochondrial matrix. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.

[ "PMID:11251115" ]

null

[]

[ "GO:0010496", "GO:0035672" ]

[]

[ "GO:0010496", "GO:0035672" ]

[]

tb

2010-08-27T04:38:18Z

false

true

7

GO:0090375

90,375

obsolete negative regulation of transcription from RNA polymerase II promoter in response to iron ion starvation

biological_process

OBSOLETE. Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of deprivation of iron ions.

[ "GOC:tb" ]

This term was obsoleted because it represents a GO-CAM model.

[ "negative regulation of transcription from RNA polymerase II promoter in response to iron deficiency" ]

[ "EXACT" ]

[]

[ "GO:0000122", "GO:0010106" ]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/26004\" xsd:anyURI" ]

tb

2010-09-01T01:22:23Z

true

4

GO:0090376

90,376

seed trichome differentiation

biological_process

The process in which a relatively unspecialized epidermal cell acquires the specialized features of a seed trichome. A seed trichome is a trichome that develops from seed coat epidermis and is often long with putative dispersal function.

[ "GOC:tb", "PMID:17905721" ]

null

[ "cotton fiber development", "seed hair differentiation", "seed trichome development" ]

[ "NARROW", "EXACT", "RELATED" ]

[]

[ "GO:0003006", "GO:0010026", "GO:0022412" ]

[ "part_of GO:0048316" ]

[ "part_of" ]

[ "GO:0048316" ]

[ "GO:0003006", "GO:0010026", "GO:0022412", "GO:0048316" ]

[]

tb

2010-09-15T02:07:10Z

false

true

1

GO:0090378

90,378

seed trichome elongation

biological_process

The process in which a seed trichome irreversibly increases in size in one [spatial] dimension or along one axis, resulting in the morphogenesis of the cell.

[ "GOC:tb" ]

The increase in length of the seed trichome without cell division. Elongation is defined to be from 5 to 20 DPA in Gossypium spp.

[]

[ "GO:0003006", "GO:0009826", "GO:0022412" ]

[ "part_of GO:0090376" ]

[ "part_of" ]

[ "GO:0090376" ]

[ "GO:0003006", "GO:0009826", "GO:0022412", "GO:0090376" ]

[]

tb

2010-09-15T02:20:47Z

false

true

6

GO:0090379

90,379

secondary cell wall biogenesis involved in seed trichome differentiation

biological_process

A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of inextensible cellulose- and pectin-containing cell walls that are formed between the plasma membrane and primary cell wall of seed trichomes after cell expansion is complete.

[ "GOC:tb" ]

The processes involved in the massive amount of secondary wall cellulose synthesis in seed trichomes continue to 30 DPA in Gossypium spp.

[ "secondary cell wall biosynthesis involved in seed trichome differentiation", "seed trichome secondary wall biosynthesis" ]

[ "EXACT", "RELATED" ]

[]

[ "GO:0009834" ]

[ "part_of GO:0090376" ]

[ "part_of" ]

[ "GO:0090376" ]

[ "GO:0009834", "GO:0090376" ]

[ "GO:0009834", "part_of GO:0090376" ]

[]

tb

2010-09-15T02:24:34Z

false

true

9

GO:0090381

90,381

regulation of heart induction

biological_process

Any process that modulates the rate, frequency, or extent of heart induction. Heart induction is the close range interaction between mesoderm and endoderm or ectoderm that causes cells to change their fates and specify the development of the heart.

[ "GOC:dph", "GOC:tb" ]

null

[]

[ "GO:0003156", "GO:0051239", "GO:2000826" ]

[ "regulates GO:0003129" ]

[ "regulates" ]

[ "GO:0003129" ]

[ "GO:0003129", "GO:0003156", "GO:0051239", "GO:2000826" ]

[ "GO:0065007", "regulates GO:0003129" ]

[]

tb

2010-10-04T10:23:43Z

false

true

2

GO:0090382

90,382

phagosome maturation

biological_process

A process that is carried out at the cellular level which results in the arrangement of constituent parts of a phagosome within a cell. Phagosome maturation begins with endocytosis and formation of the early phagosome and ends with the formation of the hybrid organelle, the phagolysosome.

[ "GOC:kmv", "GOC:tb" ]

null

[]

[ "GO:0006996" ]

[ "has_part GO:0001845", "has_part GO:0006887" ]

[ "has_part", "has_part" ]

[ "GO:0001845", "GO:0006887" ]

[ "GO:0001845", "GO:0006887", "GO:0006996" ]

[]

tb

2010-10-19T11:10:34Z

false

true

9

GO:0090383

90,383

phagosome acidification

biological_process

Any process that reduces the pH of the phagosome, corresponding to an increase in hydrogen ion concentration.

[ "GOC:kmv", "GOC:tb" ]

null

[ "phagosomal acidification" ]

[ "EXACT" ]

[]

[ "GO:0051452" ]

[ "part_of GO:0090382" ]

[ "part_of" ]

[ "GO:0090382" ]

[ "GO:0051452", "GO:0090382" ]

[]

tb

2010-10-27T10:20:22Z

false

true

9

GO:0090384

90,384

phagosome-lysosome docking

biological_process

The initial attachment of a phagosome membrane to a lysosome membrane. Docking requires only that the proteins come close enough to interact and adhere.

[ "GOC:kmv", "GOC:tb" ]

null

[ "lysosome recruitment to phagosome" ]

[ "EXACT" ]

[]

[ "GO:0048278" ]

[ "part_of GO:0001845" ]

[ "part_of" ]

[ "GO:0001845" ]

[ "GO:0001845", "GO:0048278" ]

[]

tb

2010-10-27T10:24:28Z

false

true

1

GO:0090385

90,385

phagosome-lysosome fusion

biological_process

The creation of a phagolysosome from a phagosome and a lysosome.

[ "GOC:kmv", "GOC:tb" ]

null

[]

[ "GO:0006906" ]

[ "part_of GO:0001845" ]

[ "part_of" ]

[ "GO:0001845" ]

[ "GO:0001845", "GO:0006906" ]

[]

tb

2010-10-27T10:24:28Z

false

true

2

GO:0090386

90,386

phagosome maturation involved in apoptotic cell clearance

biological_process

A process that is carried out at the cellular level which results in the arrangement of constituent parts of a phagosome within a cell and contributes to apoptotic cell clearance. Phagosome maturation begins with endocytosis and formation of the early phagosome and ends with the formation of the hybrid organelle, the p...

[ "GOC:kmv", "GOC:tb" ]

null

[]

[ "GO:0090382" ]

[ "part_of GO:0043277" ]

[ "part_of" ]

[ "GO:0043277" ]

[ "GO:0043277", "GO:0090382" ]

[ "GO:0090382", "part_of GO:0043277" ]

[]

tb

2010-10-27T10:57:39Z

false

true

5

GO:0090387

90,387

phagolysosome assembly involved in apoptotic cell clearance

biological_process

The process in which a phagosome, a vesicle formed by phagocytosis, fuses with a lysosome as a part of apoptotic cell clearance.

[ "GOC:kmv", "GOC:tb" ]

null

[]

[ "GO:0001845" ]

[ "part_of GO:0090386" ]

[ "part_of" ]

[ "GO:0090386" ]

[ "GO:0001845", "GO:0090386" ]

[ "GO:0001845", "part_of GO:0043277" ]

[]

tb

2010-10-27T10:57:39Z

false

true

3

GO:0090388

90,388

obsolete phagosome-lysosome docking involved in apoptotic cell clearance

biological_process

OBSOLETE. The initial attachment of a phagosome membrane to a lysosome membrane that occurs as a part of apoptotic cell clearance. Docking requires only that the proteins come close enough to interact and adhere.

[ "GOC:kmv", "GOC:tb" ]

This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.

[]

[ "GO:0090384", "GO:0090387" ]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31254\" xsd:anyURI" ]

tb

2010-10-27T10:57:39Z

true

4

GO:0090389

90,389

phagosome-lysosome fusion involved in apoptotic cell clearance

biological_process

The creation of a phagolysosome from a phagosome and a lysosome as a part of apoptotic cell clearance.

[ "GOC:kmv", "GOC:tb" ]

null

[]

[ "GO:0090385" ]

[ "part_of GO:0090387" ]

[ "part_of" ]

[ "GO:0090387" ]

[ "GO:0090385", "GO:0090387" ]

[ "GO:0090385", "part_of GO:0090387" ]

[]

tb

2010-10-27T10:57:39Z

false

true

6

GO:0090390

90,390

phagosome acidification involved in apoptotic cell clearance

biological_process

Any process that reduces the pH of the phagosome, corresponding to an increase in hydrogen ion concentration, and occurs as a part of apoptotic cell clearance.

[ "GOC:kmv", "GOC:tb" ]

null

[]

[ "GO:0090383" ]

[ "part_of GO:0090386" ]

[ "part_of" ]

[ "GO:0090386" ]

[ "GO:0090383", "GO:0090386" ]

[ "GO:0090383", "part_of GO:0090386" ]

[]

tb

2010-10-27T10:57:39Z

false

true

2

GO:0090391

90,391

granum assembly

biological_process

A process that is carried out at the cellular level which results in the assembly of a granum. A granum is a distinct stack of lamellae seen within chloroplasts.

[ "GOC:tb" ]

null

[ "grana formation" ]

[ "EXACT" ]

[]

[ "GO:0022607" ]

[ "part_of GO:0009658" ]

[ "part_of" ]

[ "GO:0009658" ]

[ "GO:0009658", "GO:0022607" ]

[]

tb

2010-12-08T04:25:46Z

false

true

2

GO:0090392

90,392

sepal giant cell differentiation

biological_process

The process in which a relatively unspecialized cell acquires specialized features of a sepal giant cell. A sepal giant cell is a pavement cell that is part of the sepal epidermis and stretches one fifth the length of the sepal with a chromosome content of 16C.

[ "GOC:tb", "PMID:20485493" ]

null

[]

[ "GO:0090627" ]

[]

[ "GO:0090627" ]

[]

tb

2010-12-14T04:38:06Z

false

true

5

GO:0090393

90,393

sepal giant cell development

biological_process

The process aimed at the progression of a sepal giant cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.

[ "GOC:tb" ]

null

[ "sepal giant cell formation" ]

[ "RELATED" ]

[]

[ "GO:0048468" ]

[ "part_of GO:0090392" ]

[ "part_of" ]

[ "GO:0090392" ]

[ "GO:0048468", "GO:0090392" ]

[]

tb

2010-12-14T04:44:34Z

false

true

5

GO:0090394

90,394

negative regulation of excitatory postsynaptic potential

biological_process

Any process that prevents the establishment or decreases the extent of the excitatory postsynaptic potential (EPSP) which is a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (E...

[ "GOC:BHF" ]

null

[ "negative regulation of EPSP", "negative regulation of excitatory post-synaptic membrane potential", "reduction of excitatory postsynaptic membrane potential" ]

[ "RELATED", "EXACT", "EXACT" ]

[]

[ "GO:0048519", "GO:0098815" ]

[ "negatively_regulates GO:0060079" ]

[ "negatively_regulates" ]

[ "GO:0060079" ]

[ "GO:0048519", "GO:0060079", "GO:0098815" ]

[ "GO:0065007", "negatively_regulates GO:0060079" ]

[]

tb

2010-12-15T01:43:12Z

false

true

9

GO:0090397

90,397

stigma papilla

cellular_component

A plant cell papilla that is part of a stigma papilla cell.

[ "GOC:tb" ]

Part of stigma papilla cell (PO:0025168).

[]

[ "GO:0090395" ]

[]

[ "GO:0090395" ]

[]

tb

2010-12-15T03:26:20Z

false

true

7

GO:0090398

90,398

cellular senescence

biological_process

A cell aging process stimulated in response to cellular stress, whereby normal cells lose the ability to divide through irreversible cell cycle arrest.

[ "GOC:BHF", "PMID:28682291" ]

null

[]

[ "Reactome:R-HSA-2559583 \"Cellular Senescence\"" ]

[ "GO:0009987" ]

[ "part_of GO:0033554" ]

[ "part_of" ]

[ "GO:0033554" ]

[ "GO:0009987", "GO:0033554" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/22788\" xsd:anyURI" ]

tb

2011-01-05T02:27:08Z

false

true

6

GO:0090399

90,399

replicative senescence

biological_process

The process by which normal somatic cells reach an irreversible stage of cell cycle arrest following multiple rounds of replication; this end stage is associated with marked changes in gene expression and function. This is a natural barrier to unlimited proliferation of somatic cells, and is believed to be contolled by...

[ "PMID:17014937", "PMID:23061726" ]

null

[]

[ "GO:0022402" ]

[]

[ "GO:0022402" ]

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/22788\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/29342\" xsd:anyURI" ]

tb

2011-01-05T02:32:29Z

false

true

7

GO:0090400

90,400

stress-induced premature senescence

biological_process

A cellular senescence process associated with the dismantling of a cell as a response to environmental factors such as hydrogen peroxide or X-rays.

[ "GOC:BHF" ]

null

[ "SIPS" ]

[ "EXACT" ]

[]

[ "GO:0090398" ]

[]

[ "GO:0090398" ]

[]

tb

2011-01-05T02:32:29Z

false

true

9

GO:0090401

90,401

obsolete viral-induced premature senescence

biological_process

OBSOLETE. A cellular senescence process associated with the dismantling of a cell as a response to viral infection.

[ "GOC:BHF" ]

The reason for obsoletion is was not clearly defined. There is nothing in the literature that mentions this process; there are papers that mention viral proteins overcoming premature senescence, for example, PMID:22326283.

[]

tb

2011-01-05T02:37:57Z

true

2

GO:0090402

90,402

oncogene-induced cell senescence

biological_process

A cellular senescence process associated with the dismantling of a cell as a response to oncogenic stress, such as the activation of the Ras oncogenic family.

[ "GOC:BHF" ]

null

[ "OIS" ]

[ "EXACT" ]

[]

[ "GO:0090398" ]

[]

[ "GO:0090398" ]

[]

tb

2011-01-05T02:37:57Z

false

true

8

GO:0090403

90,403

oxidative stress-induced premature senescence

biological_process

A cellular senescence process associated with the dismantling of a cell as a response to oxidative stress, e.g. high levels of reactive oxygen species, such as superoxide anions, hydrogen peroxide, and hydroxyl radicals.

[ "GOC:BHF" ]

null

[]

[ "GO:0090400" ]

[ "part_of GO:0034599" ]

[ "part_of" ]

[ "GO:0034599" ]

[ "GO:0034599", "GO:0090400" ]

[]

tb

2011-01-05T02:37:57Z

false

true

9

GO:0090404

90,404

pollen tube tip

cellular_component

The region at growing end of the pollen tube cell, where polarized growth occurs.

[ "GOC:tb", "PO:0025195", "PO:0025281" ]

null

[]

[ "GO:0035838" ]

[ "part_of GO:0090406" ]

[ "part_of" ]

[ "GO:0090406" ]

[ "GO:0035838", "GO:0090406" ]

[]

tb

2011-01-10T10:25:58Z

false

true

5

GO:0090405

90,405

unicellular trichome branch

cellular_component

A cell projection part that is a branch of a unicellular trichome.

[ "GOC:tb", "PO:0025537" ]

Unicellular trichome (PO:0025537) is a trichome(PO:0000282) that is a single plant cell (PO:0009002). For a cell that forms a branch of a multicellular trichome, see multicellular trichome branch cell (PO:0025163).

[]

[ "GO:0110165" ]

[ "has_part GO:0090552", "part_of GO:0042995" ]

[ "has_part", "part_of" ]

[ "GO:0090552", "GO:0042995" ]

[ "GO:0042995", "GO:0090552", "GO:0110165" ]

[]

tb

2011-01-10T10:30:39Z

false

true

7

GO:0090406

90,406

pollen tube

cellular_component

A tubular cell projection that is part of a pollen tube cell and extends from a pollen grain.

[ "GOC:tb", "PO:0025195", "PO:0025281" ]

Carries the male gametes to into or near the ovule. May be branched in gymnosperms. This term replaces the obsolete term PO:0006345. Part of pollen tube cell (PO:0025195).

[]

[ "GO:0120025" ]

[]

[ "GO:0120025" ]

[]

tb

2011-01-10T01:59:40Z

false

true

3

GO:0090407

90,407

organophosphate biosynthetic process

biological_process

The chemical reactions and pathways resulting in the biosynthesis of deoxyribose phosphate, the phosphorylated sugar 2-deoxy-erythro-pentose.

[ "GOC:chem_mtg" ]

null

[]

[ "GO:0009058", "GO:0019637" ]

[]

[ "GO:0009058", "GO:0019637" ]

[]

tb

2011-02-26T02:22:41Z

false

true

5

GO:0090408

90,408

phloem nitrate loading

biological_process

The process of loading nitrate into the sieve tube or companion cell of the phloem for long distance transport from source to sink.

[ "GOC:tb" ]

null

[]

[ "GO:0015706", "GO:0110126" ]

[]

[ "GO:0015706", "GO:0110126" ]

[]

tb

2011-06-01T10:06:21Z

false

true

9

GO:0090409

90,409

malonyl-CoA synthetase activity

molecular_function

Catalysis of the reaction: malonate + ATP + coenzyme A = malonyl-CoA + AMP + diphosphate.

[ "RHEA:32139" ]

null

[]

[ "EC:6.2.1.76", "MetaCyc:RXN-12359", "RHEA:32139" ]

[ "GO:0016405" ]

[]

[ "GO:0016405" ]

[]

[ "skos:exactMatch EC:6.2.1.76", "skos:exactMatch RHEA:32139", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/24054\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30193\" xsd:anyURI" ]

tb

2011-06-10T01:51:16Z

false

true

2

GO:0090410

90,410

malonate catabolic process

biological_process

The chemical reactions and pathways resulting in the breakdown of malonate, the propanedioate ion.

[ "GOC:tb" ]

null

[]

[ "GO:0043649" ]

[]

[ "GO:0043649" ]

[]

tb

2011-06-10T01:53:43Z

false

true

4

GO:0090411

90,411

brassinosteroid binding

molecular_function

Binding to a brassinosteroid.

[ "GOC:tb" ]

null

[]

[ "GO:0005496" ]

[]

[ "GO:0005496" ]

[]

tb

2011-08-11T02:25:30Z

false

true

6

GO:0090412

90,412

obsolete positive regulation of transcription from RNA polymerase II promoter involved in fatty acid biosynthetic process

biological_process

OBSOLETE. Any positive regulation of transcription from RNA polymerase II promoter that is involved in fatty acid biosynthetic process.

[ "GOC:vw" ]

null

[ "positive regulation of transcription from RNA polymerase II promoter involved in fatty acid biosynthetic process" ]

[ "EXACT" ]

[]

[ "GO:0045944" ]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/12739\" xsd:anyURI" ]

tb

2011-09-01T03:10:41Z

true

2

GO:0090413

90,413

obsolete negative regulation of transcription from RNA polymerase II promoter involved in fatty acid biosynthetic process

biological_process

OBSOLETE. Any negative regulation of transcription from RNA polymerase II promoter that is involved in fatty acid biosynthetic process.

[ "GOC:vw" ]

null

[ "negative regulation of transcription from RNA polymerase II promoter involved in fatty acid biosynthetic process" ]

[ "EXACT" ]

[]

[ "GO:0000122" ]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/12739\" xsd:anyURI" ]

tb

2011-09-01T03:10:41Z

true

7

GO:0090414

90,414

molybdate ion export from vacuole

biological_process

The directed movement of molybdate ions out of the vacuole.

[ "GOC:tb" ]

null

[]

[ "GO:0010496", "GO:0015689", "GO:0034486" ]

[]

[ "GO:0010496", "GO:0015689", "GO:0034486" ]

[]

tb

2011-09-15T02:08:43Z

false

true

4

GO:0090415

90,415

7-hydroxymethyl chlorophyll a reductase activity

molecular_function

Catalysis of the reaction: 7-hydroxymethyl chlorophyll a + 2 reduced ferredoxin + 2 H+ chlorophyll a + 2 oxidized ferredoxin + H2O.

[ "GOC:kad", "PMID:21934147", "RHEA:53544" ]

null

[]

[ "EC:1.17.7.2", "RHEA:53544" ]

[ "GO:0052592" ]

[]

[ "GO:0052592" ]

[]

[ "skos:exactMatch EC:1.17.7.2", "skos:exactMatch RHEA:53544", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/27696\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30193\" xsd:anyURI" ]

tb

2011-10-03T12:08:27Z

false

true

1

GO:0090417

90,417

N-methylnicotinate transmembrane transporter activity

molecular_function

Enables the transfer of N-methylnicotinate from one side of a membrane to the other.

[ "GOC:tb" ]

null

[ "N-methylnicotinate transporter activity" ]

[ "RELATED" ]

[]

[ "GO:0015651" ]

[ "part_of GO:2001143" ]

[ "part_of" ]

[ "GO:2001143" ]

[ "GO:0015651", "GO:2001143" ]

[]

tb

2011-10-19T11:09:59Z

false

true

2

GO:0090418

90,418

obsolete positive regulation of transcription involved in S-phase of mitotic cell cycle

biological_process

OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription of target genes that are transcribed as part of the S phase of the mitotic cell cycle.

[ "PMID:16912276" ]

This term was made obsolete because it is unclear exactly what it means. It could mean either 'regulation of transcription during phase X' or 'regulation of transition between phase X and phase Y'.

[ "activation of S phase specific transcription in the mitotic cell cycle", "activation of transcription from RNA polymerase II promoter during S phase of the mitotic cell cycle", "activation of transcription involved in S phase of mitotic cell cycle", "positive regulation of S phase specific transcription in t...

[ "RELATED", "RELATED", "RELATED", "RELATED", "RELATED", "EXACT", "RELATED", "RELATED", "RELATED" ]

[]

[ "GO:0045944" ]

[]

tb

2011-10-26T03:54:00Z

true

7

GO:0090419

90,419

obsolete negative regulation of transcription involved in G2/M transition of mitotic cell cycle

biological_process

OBSOLETE. Any process that inhibits or decreases the frequency, rate or extent of transcription of target genes that are transcribed as part of the G2/M transition of the mitotic cell cycle.

[ "GOC:mtg_cell_cycle", "PMID:10747051" ]

This term was obsoleted because it represents a GO-CAM model.

[ "down-regulation of transcription from RNA polymerase II promoter during the G2/M transition of the mitotic cell cycle", "negative regulation of transcription from RNA polymerase II promoter during G2/M transition of the mitotic cell cycle" ]

[ "RELATED", "RELATED" ]

[]

[ "GO:0000086", "GO:0000122" ]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/26002\" xsd:anyURI" ]

tb

2011-10-26T03:59:41Z

true

4

GO:0090420

90,420

obsolete naphthalene-containing compound metabolic process

biological_process

OBSOLETE. The chemical reactions and pathways involving naphthalene-containing compounds.

[ "GOC:dph", "GOC:tb" ]

This term was obsoleted because it is a unnecessary grouping class.

[]

tb

2011-12-12T11:32:34Z

true

9

GO:0090421

90,421

embryonic meristem initiation

biological_process

Initiation of a region of tissue in a plant embryo that is composed of one or more undifferentiated cells capable of undergoing mitosis and differentiation.

[ "GOC:tb" ]

null

[]

[ "GO:0010014" ]

[]

[ "GO:0010014" ]

[]

tb

2012-04-13T02:52:34Z

false

true

9

GO:0090422

90,422

thiamine pyrophosphate transmembrane transporter activity

molecular_function

Enables the transfer of thiamine pyrophosphate a substance from one side of a membrane to the other.

[ "GOC:tb" ]

null

[ "thiamine diphosphate transporter activity", "thiamine pyrophosphate transporter activity" ]

[ "EXACT", "NARROW" ]

[]

[ "Reactome:R-HSA-8875838 \"SLC25A19 transports ThDP from cytosol to mitochondrial matrix\"" ]

[ "GO:0015234", "GO:0015605", "GO:0015651" ]

[ "part_of GO:0030974" ]

[ "part_of" ]

[ "GO:0030974" ]

[ "GO:0015234", "GO:0015605", "GO:0015651", "GO:0030974" ]

[]

tb

2012-04-17T12:28:11Z

false

true

3

GO:0090423

90,423

phytochelatin-metal complex formation

biological_process

A phytochelatin metabolic process in which a metal is incorporated with phytochelatin to form a complex.

[ "GOC:tb" ]

null

[ "low molecular weight phytochelatin complex formation", "LWM phytochelatin complex formation" ]

[ "RELATED", "RELATED" ]

[]

[ "GO:0046937" ]

[]

[ "GO:0046937" ]

[]

tb

2012-04-20T03:46:45Z

false

true

6

GO:0090424

90,424

phytochelatin-metal-sulfur complex formation

biological_process

A phytochelatin metabolic process in which a metal and exogenous sulfur are incorporated with phytochelatin to form a complex.

[ "GOC:tb" ]

null

[ "high molecular weight phytochelatin complex formation", "HWM phytochelatin complex formation" ]

[ "RELATED", "RELATED" ]

[]

[ "GO:0046937" ]

[]

[ "GO:0046937" ]

[]

tb

2012-04-20T03:46:45Z

false

true

4

GO:0090425

90,425

acinar cell differentiation

biological_process

The epithelial cell differentiation process in which a relatively unspecialized cell acquires specialized features of an acinar cell, a secretory cell that is grouped together with other cells of the same type to form grape-shaped clusters known as acini.

[ "GOC:dph", "GOC:tb" ]

null

[]

[ "GO:0002067" ]

[]

[ "GO:0002067" ]

[]

tb

2012-05-04T09:24:48Z

false

true

6

GO:0090426

90,426

actin filament bundle convergence

biological_process

A process of actin filament bundle distribution that results in the compaction of actin filaments.

[ "GOC:dph", "GOC:tb" ]

null

[]

[ "GO:0070650" ]

[]

[ "GO:0070650" ]

[]

tb

2012-05-04T09:33:09Z

false

true

1

GO:0090427

90,427

activation of meiosis

biological_process

Any process that starts the inactive process of meiosis.

[ "GOC:dph", "GOC:tb" ]

null

[]

[ "GO:0045836" ]

[]

[ "GO:0045836" ]

[]

tb

2012-05-04T09:50:19Z

false

true

2

GO:0090428

90,428

perianth development

biological_process

The process whose specific outcome is the progression of the perianth over time, from its formation to the mature structure. The perianth is a collective phyllome structure composed of two or more petals, sepals, or tepals.

[ "GOC:tb", "PO:0009058" ]

null

[]

[ "GO:0048438" ]

[]

[ "GO:0048438" ]

[]

tb

2012-05-08T06:02:15Z

false

true

5

GO:0090429

90,429

obsolete detection of endogenous biotic stimulus

biological_process

OBSOLETE. The series of events in which an endogenous biotic stimulus is received by a cell and converted into a molecular signal.

[ "GOC:dph", "GOC:tb" ]

This term was obsoleted because it is an unnecessary grouing term.

[]

[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/20976\" xsd:anyURI" ]

tb

2012-05-11T09:19:39Z

true

3

GO:0090430

90,430

caffeoyl-CoA: alcohol caffeoyl transferase activity

molecular_function

Catalysis of the reaction: caffeoyl-CoA + a saturated primary alcohol = an alkyl caffeate + CoA.

[ "GOC:pz" ]

null

[]

[ "GO:0016747" ]

[]

[ "GO:0016747" ]

[]

tb

2012-07-25T10:48:15Z

false

true

1

GO:0090431

90,431

alkyl caffeate ester biosynthetic process

biological_process

The chemical reactions and pathways resulting in the formation of ester derivatives of alkyl caffeate.

[ "GOC:pz" ]

null

[ "alkyl caffeate ester anabolism", "alkyl caffeate ester biosynthesis", "alkyl caffeate ester formation", "alkyl caffeate ester synthesis" ]

[ "EXACT", "EXACT", "EXACT", "EXACT" ]

[]

[ "GO:0009713", "GO:0009802" ]

[]

[ "GO:0009713", "GO:0009802" ]

[]

tb

2012-07-25T11:12:09Z

false

true

1

GO:0090432

90,432

myristoyl-CoA ligase activity

molecular_function

Catalysis of the reaction: ATP + myristic acid + CoA = AMP + diphosphate + myristoyl-CoA.

[ "GOC:al", "PMID:18071249" ]

null

[ "myristoyl-CoA synthetase activity" ]

[ "EXACT" ]

[]

[ "GO:0004467" ]

[]

[ "GO:0004467" ]

[]

tb

2012-07-25T03:31:31Z

false

true

6