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GO

Dataset card Data Studio Files
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 Community
go_id
string
go_numeric_id
int64
name
string
namespace
string
definition
string
definition_xrefs
list
comment
string
synonyms
list
synonym_scopes
list
alt_ids
list
subsets
list
xrefs
list
is_a_ids
list
relationship_edges
list
relationship_types
list
relationship_target_ids
list
parent_ids
list
intersection_of
list
union_of
list
disjoint_from
list
replaced_by
list
consider
list
property_values
list
created_by
string
creation_date
string
is_obsolete
bool
in_go_basic
bool
split_bucket
int64
GO:0090433
90,433
palmitoyl-CoA ligase activity
molecular_function
Catalysis of the reaction: ATP + palmitic acid + CoA = AMP + diphosphate + palmitoyl-CoA.
[ "GOC:al", "PMID:18071249" ]
null
[ "palmitoyl-CoA synthetase activity" ]
[ "EXACT" ]
[]
[]
[ "Reactome:R-HSA-434382 \"ACSL3,4 ligates coenzyme A (CoA-SH) to a long chain fatty acid yielding fatty acyl-coenzyme A\"" ]
[ "GO:0004467" ]
[]
[]
[]
[ "GO:0004467" ]
[]
[]
[]
[]
[]
[]
tb
2012-07-25T03:31:31Z
false
true
1
GO:0090434
90,434
oleoyl-CoA ligase activity
molecular_function
Catalysis of the reaction: ATP + oleic acid + CoA = AMP + diphosphate + oleoyl-CoA.
[ "GOC:al", "PMID:18071249" ]
null
[ "oleoyl-CoA synthetase activity" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0004467" ]
[]
[]
[]
[ "GO:0004467" ]
[]
[]
[]
[]
[]
[]
tb
2012-07-25T03:31:31Z
false
true
4
GO:0090435
90,435
protein localization to nuclear envelope
biological_process
A process in which a protein is transported to, or maintained at, a location within a nuclear envelope.
[ "GOC:tb" ]
null
[ "protein localization in nuclear envelope" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0034504" ]
[]
[]
[]
[ "GO:0034504" ]
[]
[]
[]
[]
[]
[]
tb
2012-07-30T01:50:41Z
false
true
2
GO:0090436
90,436
leaf pavement cell development
biological_process
The process whose specific outcome is the progression of an leaf pavement cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a leaf pavement cell fate.
[ "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0048468" ]
[ "part_of GO:0048366" ]
[ "part_of" ]
[ "GO:0048366" ]
[ "GO:0048366", "GO:0048468" ]
[]
[]
[]
[]
[]
[]
tb
2012-07-31T16:08:53Z
false
true
9
GO:0090437
90,437
socket cell differentiation
biological_process
The process in which a relatively unspecialized cell acquires specialized features of a socket cell, a shoot epidermal cell that surrounds a trichome and provides its support.
[ "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0090627" ]
[ "part_of GO:0090558" ]
[ "part_of" ]
[ "GO:0090558" ]
[ "GO:0090558", "GO:0090627" ]
[]
[]
[]
[]
[]
[]
tb
2012-07-31T17:01:28Z
false
true
9
GO:0090438
90,438
camelliol C synthase activity
molecular_function
Catalyzes the reaction: (S)-2,3-epoxysqualene = camelliol C.
[ "PMID:17985917", "RHEA:31011" ]
null
[ "(3S)-2,3-epoxy-2,3-dihydrosqualene mutase (cyclizing, camelliol-C-forming)" ]
[ "EXACT" ]
[]
[]
[ "EC:5.4.99.38", "MetaCyc:RXN-12330", "RHEA:31011" ]
[ "GO:0016866" ]
[]
[]
[]
[ "GO:0016866" ]
[]
[]
[]
[]
[]
[ "skos:exactMatch EC:5.4.99.38", "skos:exactMatch MetaCyc:RXN-12330", "skos:exactMatch RHEA:31011", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30910\" xsd:anyURI" ]
tb
2012-08-08T15:41:45Z
false
true
7
GO:0090439
90,439
tetraketide alpha-pyrone synthase activity
molecular_function
Catalyzes the reaction: 7-hydroxylauroyl-CoA + 3 malonyl-CoA + 2 H+ = 2-(8-hydroxy-2-oxotridecyl)-6-oxopyran-4-olate + 3 CO2 + 4 coenzyme A.
[ "MetaCyc:RXN-16407", "PMID:21193570" ]
null
[]
[]
[]
[]
[ "MetaCyc:RXN-16407" ]
[ "GO:0016747" ]
[]
[]
[]
[ "GO:0016747" ]
[]
[]
[]
[]
[]
[ "skos:exactMatch MetaCyc:RXN-16407", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/28324\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/28523\" xsd:anyURI" ]
tb
2012-08-09T14:35:06Z
false
true
8
GO:0090440
90,440
abscisic acid transmembrane transporter activity
molecular_function
Enables the transfer of abscisic acid from one side of a membrane to the other.
[ "GOC:tb" ]
null
[ "abscisic acid transporter activity" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0008028", "GO:0015665", "GO:0170055" ]
[ "part_of GO:0080168" ]
[ "part_of" ]
[ "GO:0080168" ]
[ "GO:0008028", "GO:0015665", "GO:0080168", "GO:0170055" ]
[]
[]
[]
[]
[]
[]
tb
2012-08-20T14:29:42Z
false
true
7
GO:0090441
90,441
obsolete trehalose biosynthesis in response to heat stress
biological_process
OBSOLETE. The chemical reactions and pathways resulting in the formation of trehalose that occur as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.
[ "GOC:dph", "GOC:tb" ]
The reason for obsoletion is that this term is pre-composed and should be represented as a GO-CAM model.
[ "trehalose biosynthetic process in response to heat stress" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0005992" ]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/28943\" xsd:anyURI" ]
tb
2012-08-23T13:53:07Z
true
true
4
GO:0090442
90,442
obsolete trehalose catabolism in response to heat stress
biological_process
OBSOLETE. The chemical reactions and pathways resulting in the degradation of trehalose that occur as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.
[ "GOC:dph", "GOC:tb" ]
The reason for obsoletion is that this term is pre-composed and should be represented as a GO-CAM model.
[ "trehalose catabolic process in response to heat stress" ]
[ "EXACT" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0005993" ]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/28943\" xsd:anyURI" ]
tb
2012-08-23T13:53:07Z
true
true
3
GO:0090443
90,443
FAR/SIN/STRIPAK complex
cellular_component
A conserved protein phosphatase type 2A complex which contains a protein phosphatase type 2A, a protein phosphatase regulatory subunit, a striatin, an FHA domain protein and other subunits (at least six proteins). In fission yeast this complex negatively regulate the septation initiation network at the spindle pole bod...
[ "GOC:vw", "PMID:21561862", "PMID:22119525" ]
null
[ "FAR complex", "SIN inhibitory phosphatase (SIP) complex", "SIN inhibitory phosphatase complex", "SIP complex", "striatin interacting phosphatase and kinase complex", "STRIPAK signalling complex" ]
[ "RELATED", "EXACT", "EXACT", "EXACT", "EXACT", "RELATED" ]
[]
[]
[]
[ "GO:0032991" ]
[]
[]
[]
[ "GO:0032991" ]
[]
[]
[]
[]
[]
[]
tb
2012-08-23T14:20:39Z
false
true
9
GO:0090444
90,444
regulation of nematode larval development, heterochronic
biological_process
Any process that modulates the consistent predetermined time point at which a nematode larva progresses from an initial condition to a later condition and the rate at which this time point is reached.
[ "PMID:17550772" ]
null
[]
[]
[]
[]
[]
[ "GO:0040034", "GO:0061062" ]
[]
[]
[]
[ "GO:0040034", "GO:0061062" ]
[]
[]
[]
[]
[]
[]
tb
2012-08-24T13:24:43Z
false
true
3
GO:0090445
90,445
positive regulation of nematode larval development, heterochronic
biological_process
Any process that modulates the consistent predetermined time point at which a nematode larva progresses from an initial condition to a later condition and increases the rate at which this time point is reached.
[ "PMID:17550772" ]
null
[]
[]
[]
[]
[]
[ "GO:0045962", "GO:0061063", "GO:0090444" ]
[]
[]
[]
[ "GO:0045962", "GO:0061063", "GO:0090444" ]
[]
[]
[]
[]
[]
[]
tb
2012-08-24T13:24:43Z
false
true
3
GO:0090446
90,446
negative regulation of nematode larval development, heterochronic
biological_process
Any process that modulates the consistent predetermined time point at which a nematode larva progresses from an initial condition to a later condition and decreases the rate at which this time point is reached.
[ "PMID:17550772" ]
null
[]
[]
[]
[]
[]
[ "GO:0045961", "GO:0061064", "GO:0090444" ]
[]
[]
[]
[ "GO:0045961", "GO:0061064", "GO:0090444" ]
[]
[]
[]
[]
[]
[]
tb
2012-08-24T13:24:43Z
false
true
9
GO:0090447
90,447
glycerol-3-phosphate 2-O-acyltransferase activity
molecular_function
Catalysis of the reaction: an acyl-CoA + sn-glycerol 3-phosphate = CoA + a 2-acyl-sn-glycerol 3-phosphate.
[ "RHEA:33559" ]
null
[]
[]
[]
[]
[ "EC:2.3.1.198", "RHEA:33559" ]
[ "GO:0008374" ]
[]
[]
[]
[ "GO:0008374" ]
[]
[]
[]
[]
[]
[ "skos:exactMatch EC:2.3.1.198", "skos:exactMatch RHEA:33559", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30193\" xsd:anyURI" ]
tb
2012-08-31T09:23:12Z
false
true
9
GO:0090448
90,448
glucosinolate:proton symporter activity
molecular_function
Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucosinolate(out) + H+(out) = glucosinolate(in) + H+(in).
[ "PMID:22864417" ]
null
[ "glucosinolate:hydrogen symporter activity" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0015295", "GO:0141165" ]
[]
[]
[]
[ "GO:0015295", "GO:0141165" ]
[]
[]
[]
[]
[]
[]
tb
2012-09-07T16:10:37Z
false
true
8
GO:0090449
90,449
phloem glucosinolate loading
biological_process
The process of loading glucosinolates into the sieve tube or companion cell of the phloem for long distance transport from source to sink.
[ "PMID:22864417" ]
null
[]
[]
[]
[]
[]
[ "GO:0110126", "GO:1901349" ]
[]
[]
[]
[ "GO:0110126", "GO:1901349" ]
[]
[]
[]
[]
[]
[]
tb
2012-09-07T16:21:22Z
false
true
7
GO:0090451
90,451
cotyledon boundary formation
biological_process
The process in which boundaries between a cotyledon and the surrounding tissue are established and maintained.
[ "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0090691" ]
[]
[]
[]
[ "GO:0090691" ]
[]
[]
[]
[]
[]
[]
tb
2012-09-19T10:26:54Z
false
true
5
GO:0090453
90,453
aspartate transmembrane import into vacuole
biological_process
The directed movement of aspartate into the vacuole across the vacuolar membrane.
[ "GOC:tb" ]
null
[ "vacuolar aspartate import" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0015810", "GO:0034486", "GO:0034487" ]
[]
[]
[]
[ "GO:0015810", "GO:0034486", "GO:0034487" ]
[]
[]
[]
[]
[]
[]
tb
2012-09-24T14:12:46Z
false
true
5
GO:0090454
90,454
glutamate transmembrane import into vacuole
biological_process
The directed movement of glutamate into the vacuole across the vacuolar membrane.
[ "GOC:tb" ]
null
[ "vacuolar glutamate import" ]
[ "RELATED" ]
[]
[]
[]
[ "GO:0006835", "GO:0015800", "GO:0032975", "GO:0071705", "GO:1905039" ]
[]
[]
[]
[ "GO:0006835", "GO:0015800", "GO:0032975", "GO:0071705", "GO:1905039" ]
[]
[]
[]
[]
[]
[]
tb
2012-09-24T14:12:46Z
false
true
3
GO:0090455
90,455
ornithine transmembrane import into vacuole
biological_process
The directed movement of ornithine into the vacuole across the vacuolar membrane.
[ "GOC:tb" ]
null
[ "vacuolar ornithine import" ]
[ "RELATED" ]
[]
[]
[]
[ "GO:0003333", "GO:0010496", "GO:0015822", "GO:0034486", "GO:1905039" ]
[]
[]
[]
[ "GO:0003333", "GO:0010496", "GO:0015822", "GO:0034486", "GO:1905039" ]
[]
[]
[]
[]
[]
[]
tb
2012-09-24T14:12:46Z
false
true
7
GO:0090459
90,459
intracellular aspartate homeostasis
biological_process
A homeostatic process involved in the maintenance of a steady state level of aspartate within a cell.
[ "GOC:tb" ]
null
[ "aspartate homeostasis", "cellular aspartate homeostasis" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0080144" ]
[]
[]
[]
[ "GO:0080144" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/24220\" xsd:anyURI" ]
tb
2012-09-24T14:22:02Z
false
true
8
GO:0090460
90,460
intracellular threonine homeostasis
biological_process
A homeostatic process involved in the maintenance of a steady state level of threonine within a cell.
[ "GOC:tb" ]
null
[ "cellular threonine homeostasis", "threonine homeostasis" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0080144" ]
[]
[]
[]
[ "GO:0080144" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/24220\" xsd:anyURI" ]
tb
2012-09-24T14:22:02Z
false
true
6
GO:0090461
90,461
intracellular glutamate homeostasis
biological_process
A homeostatic process involved in the maintenance of a steady state level of glutamate within a cell.
[ "GOC:tb" ]
null
[ "cellular glutamate homeostasis", "glutamate homeostasis" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0080144" ]
[]
[]
[]
[ "GO:0080144" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/24220\" xsd:anyURI" ]
tb
2012-09-24T14:22:02Z
false
true
9
GO:0090462
90,462
intracellular ornithine homeostasis
biological_process
A homeostatic process involved in the maintenance of a steady state level of orthinine within a cell.
[ "GOC:tb" ]
null
[ "cellular ornithine homeostasis", "ornithine homeostasis" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0080144" ]
[]
[]
[]
[ "GO:0080144" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/24220\" xsd:anyURI" ]
tb
2012-09-24T14:22:02Z
false
true
3
GO:0090463
90,463
intracellular lysine homeostasis
biological_process
A homeostatic process involved in the maintenance of a steady state level of lysine within a cell.
[ "GOC:tb" ]
null
[ "cellular lysine homeostasis", "lysine homeostasis" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0080144" ]
[]
[]
[]
[ "GO:0080144" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/24220\" xsd:anyURI" ]
tb
2012-09-24T14:22:02Z
false
true
1
GO:0090464
90,464
intracellular histidine homeostasis
biological_process
A homeostatic process involved in the maintenance of a steady state level of histidine within a cell.
[ "GOC:tb" ]
null
[ "cellular histidine homeostasis", "histidine homeostasis" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0080144" ]
[]
[]
[]
[ "GO:0080144" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/24220\" xsd:anyURI" ]
tb
2012-09-24T14:22:02Z
false
true
4
GO:0090465
90,465
intracellular arginine homeostasis
biological_process
A homeostatic process involved in the maintenance of a steady state level of arginine within a cell.
[ "GOC:tb" ]
null
[ "arginine homeostasis", "cellular arginine homeostasis" ]
[ "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0080144" ]
[]
[]
[]
[ "GO:0080144" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/24220\" xsd:anyURI" ]
tb
2012-09-24T14:22:02Z
false
true
8
GO:0090470
90,470
shoot organ boundary specification
biological_process
The process in which the basal boundary between the stem and both vegetative and reproductive organs are established and maintained.
[ "PMID:18757555" ]
null
[]
[]
[]
[]
[]
[ "GO:0090691" ]
[]
[]
[]
[ "GO:0090691" ]
[]
[]
[]
[]
[]
[]
tb
2012-09-24T16:22:03Z
false
true
3
GO:0090471
90,471
9,15,9'-tri-cis-zeta-carotene isomerase activity
molecular_function
Catalysis of the reaction: 9,9',15-tri-cis-zeta-carotene = 9,9'-di-cis-zeta-carotene.
[ "RHEA:30967" ]
null
[ "9,15,9'-tricis-zeta-carotene cis-trans-isomerase" ]
[ "RELATED" ]
[]
[]
[ "EC:5.2.1.12", "MetaCyc:RXN-11354", "RHEA:30967" ]
[ "GO:0016859" ]
[]
[]
[]
[ "GO:0016859" ]
[]
[]
[]
[]
[]
[ "skos:exactMatch EC:5.2.1.12", "skos:exactMatch MetaCyc:RXN-11354", "skos:exactMatch RHEA:30967", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/28324\" xsd:anyURI" ]
tb
2012-09-24T16:29:49Z
false
true
8
GO:0090472
90,472
dibasic protein processing
biological_process
Any protein processing achieved by the cleavage of a peptide bond after two basic amino acids within a protein.
[ "GOC:al" ]
null
[]
[]
[]
[]
[]
[ "GO:0016485" ]
[]
[]
[]
[ "GO:0016485" ]
[]
[]
[]
[]
[]
[]
tb
2012-10-01T10:39:26Z
false
true
4
GO:0090473
90,473
lys-arg specific dibasic protein processing
biological_process
Any protein processing achieved by the cleavage of a peptide bond after a lysine-arginine amino acid residue combination within a protein.
[ "GOC:al" ]
null
[]
[]
[]
[]
[]
[ "GO:0090472" ]
[]
[]
[]
[ "GO:0090472" ]
[]
[]
[]
[]
[]
[]
tb
2012-10-01T10:42:30Z
false
true
4
GO:0090474
90,474
arg-arg specific dibasic protein processing
biological_process
Any protein processing achieved by the cleavage of a peptide bond after two consecutive arginine amino acid residues within a protein.
[ "GOC:al" ]
null
[]
[]
[]
[]
[]
[ "GO:0090472" ]
[]
[]
[]
[ "GO:0090472" ]
[]
[]
[]
[]
[]
[]
tb
2012-10-01T10:42:30Z
false
true
7
GO:0090475
90,475
lys-lys specific dibasic protein processing
biological_process
Any protein processing achieved by the cleavage of a peptide bond after two consecutive lysine amino acid residues within a protein.
[ "GOC:al" ]
null
[]
[]
[]
[]
[]
[ "GO:0090472" ]
[]
[]
[]
[ "GO:0090472" ]
[]
[]
[]
[]
[]
[]
tb
2012-10-01T10:42:30Z
false
true
3
GO:0090481
90,481
pyrimidine nucleotide-sugar transmembrane transport
biological_process
The process in which a pyrimidine nucleotide-sugar is transported across a membrane. Pyrimidine nucleotide-sugars are pyrimidine nucleotides in glycosidic linkage with a monosaccharide or monosaccharide derivative.
[ "GOC:tb" ]
Note that this term is not intended for use in annotating lateral movement within membranes.
[ "pyrimidine nucleotide-sugar membrane transport", "pyrimidine nucleotide-sugar transport" ]
[ "EXACT", "RELATED" ]
[ "GO:0015781" ]
[]
[]
[ "GO:0015780" ]
[]
[]
[]
[ "GO:0015780" ]
[]
[]
[]
[]
[]
[]
tb
2012-10-01T16:43:54Z
false
true
1
GO:0090482
90,482
vitamin transmembrane transporter activity
molecular_function
Enables the transfer of a vitamin from one side of a membrane to the other.
[ "GOC:tb" ]
null
[ "vitamin or cofactor transporter activity", "vitamin transporter activity" ]
[ "BROAD", "RELATED" ]
[ "GO:0051183" ]
[]
[]
[ "GO:0022857" ]
[ "part_of GO:0035461" ]
[ "part_of" ]
[ "GO:0035461" ]
[ "GO:0022857", "GO:0035461" ]
[]
[]
[]
[]
[]
[]
tb
2012-10-02T16:50:50Z
false
true
8
GO:0090483
90,483
phosphatidylglycerol-phosphatidylethanolamine phosphatidyltransferase activity
molecular_function
Catalysis of the reaction: phosphatidylglycerol + phosphatidylethanolamine = cardiolipin + ethanolamine.
[ "PMID:22988102" ]
null
[ "cardiolipin synthase" ]
[ "RELATED" ]
[]
[]
[]
[ "GO:0030572" ]
[]
[]
[]
[ "GO:0030572" ]
[]
[]
[]
[]
[]
[]
tb
2012-10-03T14:20:05Z
false
true
6
GO:0090485
90,485
obsolete chromosome number maintenance
biological_process
OBSOLETE. The maintenance of the standard number of chromosomes in a cell.
[ "GOC:tb" ]
The reason for obsoletion is that this term represents a phenotype, and could be captured by other terms such as GO:0007059 chromosome segregation or GO:1903467 negative regulation of mitotic DNA replication initiation.
[ "diploidization", "haploidization" ]
[ "RELATED", "RELATED" ]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0007059", "GO:1903467" ]
[]
tb
2012-10-05T11:21:45Z
true
true
1
GO:0090486
90,486
small RNA 2'-O-ribose methyltransferase activity
molecular_function
Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to the oxygen atom of a nucleoside residue in a small RNA molecule. Reaction: S-adenosyl-L-methionine + small RNA = S-adenosyl-L-homocysteine + small RNA containing a 3'-terminal 2'-O-methylnucleotide.
[ "GOC:tb", "GOC:vw", "RHEA:37887" ]
null
[ "small RNA 2'-O-methyltransferase", "small RNA 2'-O-methyltransferase activity" ]
[ "EXACT", "EXACT" ]
[]
[]
[ "EC:2.1.1.386", "RHEA:37887" ]
[ "GO:0062105" ]
[]
[]
[]
[ "GO:0062105" ]
[]
[]
[]
[]
[]
[ "skos:exactMatch EC:2.1.1.386", "skos:exactMatch RHEA:37887", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/24842\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30193\" xsd:anyURI" ]
tb
2012-10-15T16:32:49Z
false
true
5
GO:0090487
90,487
secondary metabolite catabolic process
biological_process
The chemical reactions and pathways resulting in the breakdown of secondary metabolites, the compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon.
[ "GOC:tb" ]
null
[ "secondary metabolite breakdown", "secondary metabolite catabolism", "secondary metabolite degradation" ]
[ "EXACT", "EXACT", "EXACT" ]
[]
[]
[]
[ "GO:0009056", "GO:0019748" ]
[]
[]
[]
[ "GO:0009056", "GO:0019748" ]
[]
[]
[]
[]
[]
[]
tb
2012-10-15T16:43:09Z
false
true
9
GO:0090489
90,489
tryptophan N-monooxygenase activity
molecular_function
Catalyzes the multi-step reaction: L-tryptophan + 2 O2 + 2 reduced [NADPH--hemoprotein reductase] = (E)-(indol-3-yl)acetaldehyde oxime + CO2 + 2 H+ + 3 H2O + 2 oxidized [NADPH--hemoprotein reductase].
[ "RHEA:33279" ]
null
[ "L-tryptophan,NADPH:oxygen oxidoreductase (N-hydroxylating, decarboxylating)", "tryptophan N-hydroxylase activity" ]
[ "RELATED", "RELATED" ]
[]
[]
[ "EC:1.14.14.156", "KEGG_REACTION:R08160", "RHEA:33279" ]
[ "GO:0016712" ]
[]
[]
[]
[ "GO:0016712" ]
[]
[]
[]
[]
[]
[ "skos:exactMatch EC:1.14.14.156", "skos:exactMatch RHEA:33279", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/27410\" xsd:anyURI", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30193\" xsd:anyURI" ]
tb
2012-10-16T16:22:19Z
false
true
5
GO:0090490
90,490
obsolete L-tryptophan,NADPH:oxygen oxidoreductase (N-hydroxylating)
molecular_function
OBSOLETE. Catalyzes the reaction: L-Tryptophan + Oxygen + NADPH + H+ = N-Hydroxy-L-tryptophan + NADP+ + H2O.
[ "KEGG_REACTION:R09583" ]
This term was obsoleted because it represents a sub-reaction of tryptophan N-monooxygenase activity ; GO:0090489.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0090489" ]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/27717\" xsd:anyURI" ]
tb
2012-10-16T16:27:19Z
true
true
1
GO:0090491
90,491
obsolete N-hydroxy-L-tryptophan,NADPH:oxygen oxidoreductase (N-hydroxylating)
molecular_function
OBSOLETE. Catalyzes the reaction: N-Hydroxy-L-tryptophan + Oxygen + NADPH + H+ = N,N-Dihydroxy-L-tryptophan + NADP+ + H2O.
[ "KEGG_REACTION:R09584" ]
This term was obsoleted because it represents a sub-reaction of tryptophan N-monooxygenase activity ; GO:0090489.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "GO:0090489" ]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/27717\" xsd:anyURI" ]
tb
2012-10-16T16:27:19Z
true
true
6
GO:0090493
90,493
catecholamine uptake
biological_process
The directed movement of catecholamine into a cell.
[ "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0051937" ]
[]
[]
[]
[ "GO:0051937" ]
[]
[]
[]
[]
[]
[]
tb
2012-10-17T11:06:17Z
false
true
1
GO:0090494
90,494
dopamine uptake
biological_process
The directed movement of dopamine into a cell.
[ "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0015872", "GO:0090493" ]
[]
[]
[]
[ "GO:0015872", "GO:0090493" ]
[]
[]
[]
[]
[]
[]
tb
2012-10-17T11:12:09Z
false
true
1
GO:0090495
90,495
low-density lipoprotein particle disassembly
biological_process
The disaggregation of a low-density lipoprotein particle into its constituent components.
[ "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0071829" ]
[]
[]
[]
[ "GO:0071829" ]
[]
[]
[]
[]
[]
[]
tb
2012-10-17T11:48:56Z
false
true
3
GO:0090496
90,496
obsolete mesenchyme migration involved in limb bud formation
biological_process
OBSOLETE. The migration of mesenchymal tissue that contributes to the formation of a limb bud.
[ "GOC:dph", "GOC:tb" ]
This term was obsoleted because it is a pre-composed term that should be captured as a GO-CAM model.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/31306\" xsd:anyURI" ]
tb
2012-10-17T12:04:20Z
true
true
9
GO:0090497
90,497
mesenchymal cell migration
biological_process
The orderly movement of a mesenchymal cell from one site to another, often during the development of a multicellular organism.
[ "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0001667" ]
[]
[]
[]
[ "GO:0001667" ]
[]
[]
[]
[]
[]
[]
tb
2012-10-17T12:08:17Z
false
true
9
GO:0090498
90,498
extrinsic component of Golgi membrane
cellular_component
The component of a Golgi membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.
[ "GOC:dos", "PMID:21337012" ]
null
[ "extrinsic to Golgi membrane" ]
[ "NARROW" ]
[]
[]
[]
[ "GO:0031312" ]
[ "part_of GO:0000139" ]
[ "part_of" ]
[ "GO:0000139" ]
[ "GO:0000139", "GO:0031312" ]
[ "GO:0019898", "part_of GO:0000139" ]
[]
[]
[]
[]
[]
tb
2012-10-18T14:12:48Z
false
true
3
GO:0090499
90,499
pimelyl-[acyl-carrier protein] methyl ester esterase activity
molecular_function
Catalysis of the reaction: 6-carboxyhexanoyl-[ACP] methyl ester + H2O = 6-carboxyhexanoyl-[ACP] + H+ + methanol.
[ "PMID:23045647", "RHEA:42700" ]
Note that while this reaction occurs on a modified protein (acyl-carrier protein), the ACP only acts as a carrier that later releases the end product.
[ "pimelyl-[acyl-carrier protein] methyl ester hydrolase activity" ]
[ "RELATED" ]
[]
[]
[ "EC:3.1.1.85", "MetaCyc:RXN-11483", "RHEA:42700" ]
[ "GO:0052689" ]
[]
[]
[]
[ "GO:0052689" ]
[]
[]
[]
[]
[]
[ "skos:exactMatch EC:3.1.1.85", "skos:exactMatch MetaCyc:RXN-11483", "skos:exactMatch RHEA:42700", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/28324\" xsd:anyURI" ]
tb
2012-10-19T12:10:01Z
false
true
2
GO:0090500
90,500
endocardial cushion to mesenchymal transition
biological_process
A transition where an endocardial cushion cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.
[ "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0060317" ]
[]
[]
[]
[ "GO:0060317" ]
[]
[]
[]
[]
[]
[]
tb
2012-10-22T11:51:44Z
false
true
3
GO:0090501
90,501
obsolete RNA phosphodiester bond hydrolysis
biological_process
OBSOLETE. The RNA metabolic process in which the phosphodiester bonds between ribonucleotides are cleaved by hydrolysis.
[ "GOC:dph", "GOC:tb" ]
This term was obsoleted because it represents a molecular function.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/25259\" xsd:anyURI" ]
tb
2012-10-22T12:05:27Z
true
true
3
GO:0090503
90,503
obsolete RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process
OBSOLETE. The chemical reactions and pathways involving the hydrolysis of terminal 3',5'-phosphodiester bonds in one or two strands of ribonucleotides.
[ "GOC:dph", "GOC:tb" ]
This term was obsoleted because it represents a molecular function.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/25259\" xsd:anyURI" ]
tb
2012-10-22T12:05:27Z
true
true
2
GO:0090504
90,504
epiboly
biological_process
The expansion of one cell sheet over other cells or yolk.
[ "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0002011" ]
[]
[]
[]
[ "GO:0002011" ]
[]
[]
[]
[]
[]
[]
tb
2012-10-22T12:29:52Z
false
true
8
GO:0090505
90,505
epiboly involved in wound healing
biological_process
The expansion of one cell sheet over other cells involved in wound healing.
[ "GOC:dph", "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0090504" ]
[ "part_of GO:0042060" ]
[ "part_of" ]
[ "GO:0042060" ]
[ "GO:0042060", "GO:0090504" ]
[ "GO:0090504", "part_of GO:0042060" ]
[]
[]
[]
[]
[]
tb
2012-10-22T12:38:51Z
false
true
9
GO:0090506
90,506
axillary shoot meristem initiation
biological_process
A developmental process that results in the initiation of an axillary shoot meristem. An axillary shoot meristem is a shoot meristem formed in the axil of a leaf.
[ "GOC:tb" ]
null
[ "axillary bud meristem initiation" ]
[ "RELATED" ]
[]
[]
[]
[ "GO:0010014" ]
[ "part_of GO:0010223" ]
[ "part_of" ]
[ "GO:0010223" ]
[ "GO:0010014", "GO:0010223" ]
[]
[]
[]
[]
[]
[]
tb
2012-10-23T14:47:00Z
false
true
5
GO:0090508
90,508
obsolete phenylethylamine biosynthetic process involved in synaptic transmission
biological_process
OBSOLETE. The chemical reactions and pathways resulting in the formation of phenylethylamine that contribute to synaptic transmission.
[ "GOC:tb" ]
This term was obsoleted because it is an unnecessary grouping class.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30524\" xsd:anyURI" ]
tb
2012-11-15T15:10:23Z
true
true
1
GO:0090511
90,511
periclinal cell division
biological_process
A cell division process where the division plane is parallel to the surface of the organ. It creates a new cell layer or cell file.
[ "GOC:tair_curators", "PMID:21391814" ]
null
[]
[]
[]
[]
[]
[ "GO:0051301" ]
[]
[]
[]
[ "GO:0051301" ]
[]
[]
[]
[]
[]
[]
tb
2012-11-21T11:52:40Z
false
true
2
GO:0090512
90,512
eisosome membrane domain/MCC
cellular_component
A plasma membrane part that is composed of a furrow-like plasma membrane domain and associated integral transmembrane proteins.
[ "GOC:al", "GOC:vw", "PMID:22368779" ]
null
[]
[]
[]
[]
[]
[ "GO:0044853" ]
[ "part_of GO:0032126" ]
[ "part_of" ]
[ "GO:0032126" ]
[ "GO:0032126", "GO:0044853" ]
[]
[]
[]
[]
[]
[]
tb
2012-12-07T17:00:19Z
false
true
3
GO:0090513
90,513
L-histidine transmembrane import into vacuole
biological_process
The directed movement of L-histidine into the vacuole across the vacuolar membrane.
[ "GOC:al" ]
null
[ "histidine transmembrane import into vacuole", "vacuolar histidine import" ]
[ "BROAD", "BROAD" ]
[ "GO:0090457" ]
[]
[]
[ "GO:0034490", "GO:0089709", "GO:1902024" ]
[]
[]
[]
[ "GO:0034490", "GO:0089709", "GO:1902024" ]
[]
[]
[]
[]
[]
[]
tb
2012-12-14T11:25:52Z
false
true
6
GO:0090514
90,514
L-tyrosine transmembrane import into vacuole
biological_process
The directed movement of L-tyrosine into the vacuole across the vacuolar membrane.
[ "GOC:al" ]
null
[]
[]
[]
[]
[]
[ "GO:0015828", "GO:0032975", "GO:1902475" ]
[]
[]
[]
[ "GO:0015828", "GO:0032975", "GO:1902475" ]
[]
[]
[]
[]
[]
[]
tb
2012-12-14T11:25:52Z
false
true
4
GO:0090515
90,515
L-glutamate transmembrane import into vacuole
biological_process
The directed movement of L-glutamate into the vacuole across the vacuolar membrane.
[ "GOC:al" ]
null
[]
[]
[]
[]
[]
[ "GO:0015813", "GO:0090454" ]
[]
[]
[]
[ "GO:0015813", "GO:0090454" ]
[]
[]
[]
[]
[]
[]
tb
2012-12-14T11:25:52Z
false
true
4
GO:0090516
90,516
L-serine transmembrane import into vacuole
biological_process
The directed movement of L-serine into the vacuole across the vacuolar membrane.
[ "GOC:al" ]
null
[]
[]
[]
[]
[]
[ "GO:0015825", "GO:0034491", "GO:1902475" ]
[]
[]
[]
[ "GO:0015825", "GO:0034491", "GO:1902475" ]
[]
[]
[]
[]
[]
[]
tb
2012-12-14T11:25:52Z
false
true
3
GO:0090517
90,517
L-lysine transmembrane import into vacuole
biological_process
The directed movement of L-lysine into the vacuole across the vacuolar membrane.
[ "GOC:al" ]
null
[ "lysine transmembrane import into vacuole", "vacuolar lysine import" ]
[ "BROAD", "BROAD" ]
[ "GO:0090456" ]
[]
[]
[ "GO:0015819", "GO:0034490", "GO:1903401" ]
[]
[]
[]
[ "GO:0015819", "GO:0034490", "GO:1903401" ]
[]
[]
[]
[]
[]
[]
tb
2012-09-24T14:12:46Z
false
true
2
GO:0090518
90,518
L-arginine transmembrane import into vacuole
biological_process
The directed movement of L-arginine into the vacuole across the vacuolar membrane.
[ "GOC:al" ]
null
[ "arginine transmembrane import into vacuole", "vacuolar arginine import" ]
[ "BROAD", "EXACT" ]
[ "GO:0090458" ]
[]
[]
[ "GO:0034490", "GO:1903826" ]
[]
[]
[]
[ "GO:0034490", "GO:1903826" ]
[]
[]
[]
[]
[]
[]
tb
2012-09-24T14:12:46Z
false
true
8
GO:0090519
90,519
anoxia protection
biological_process
Any process in which an organism or cell protects itself from anoxia, which may also result in resistance to repeated exposure to anoxia.
[ "GOC:tb", "PMID:19372430" ]
null
[]
[]
[]
[]
[]
[ "GO:0034059" ]
[]
[]
[]
[ "GO:0034059" ]
[]
[]
[]
[]
[]
[]
tb
2012-12-21T15:37:37Z
false
true
1
GO:0090520
90,520
sphingolipid mediated signaling pathway
biological_process
The series of molecular signals mediated by a sphingolipid.
[ "PMID:9525917" ]
null
[ "ceramide 1-phosphate signaling pathway", "ceramide signaling pathway", "sphingolipid mediated signal transduction", "sphingolipid signaling pathway", "sphingolipid-mediated signaling pathway", "sphingosine signaling pathway" ]
[ "NARROW", "NARROW", "EXACT", "RELATED", "EXACT", "NARROW" ]
[]
[]
[]
[ "GO:0007165" ]
[]
[]
[]
[ "GO:0007165" ]
[]
[]
[]
[]
[]
[]
tb
2013-01-08T09:30:54Z
false
true
8
GO:0090521
90,521
podocyte cell migration
biological_process
The orderly movement of a podocyte from one site to another, often during the development of a multicellular organism or multicellular structure. A podocyte is a specialized kidney epithelial cell.
[ "GOC:pm", "PMID:21402783" ]
null
[ "glomerular visceral epithelial cell migration" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0010631" ]
[]
[]
[]
[ "GO:0010631" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/23000\" xsd:anyURI" ]
tb
2013-01-08T11:08:57Z
false
true
4
GO:0090522
90,522
vesicle tethering involved in exocytosis
biological_process
The initial, indirect interaction between a secretory vesicle membrane and a site of exocytosis in the plasma membrane. This interaction is mediated by tethering factors (or complexes), which interact with both membranes. Interaction can occur via direct binding to membrane phospholipids or membrane proteins, or via bi...
[ "GOC:rn", "PMID:10559876", "PMID:17052174", "PMID:17488620", "PMID:22420621", "PMID:27243008" ]
null
[ "vesicle tethering to plasma membrane" ]
[ "NARROW" ]
[]
[]
[]
[ "GO:0099022", "GO:0140029" ]
[]
[]
[]
[ "GO:0099022", "GO:0140029" ]
[ "GO:0099022", "part_of GO:0006887" ]
[]
[]
[]
[]
[]
tb
2013-01-08T15:07:50Z
false
true
6
GO:0090523
90,523
cytochrome-b5 reductase activity, acting on NADPH
molecular_function
Catalysis of the reaction: 2 Fe(III)-[cytochrome b5] + NADPH = 2 Fe(II)-[cytochrome b5] + NADP+ + H+.
[ "RHEA:64576" ]
null
[ "cytochrome-b5 reductase activity" ]
[ "BROAD" ]
[]
[]
[ "RHEA:64576" ]
[ "GO:0004128" ]
[]
[]
[]
[ "GO:0004128" ]
[]
[]
[]
[]
[]
[ "skos:exactMatch RHEA:64576" ]
tb
2013-01-11T12:21:41Z
false
true
5
GO:0090524
90,524
cytochrome-b5 reductase activity, acting on NADH
molecular_function
Catalysis of the reaction: 2 Fe(III)-[cytochrome b5] + NADH = 2 Fe(II)-[cytochrome b5] + NAD+ + H+.
[ "RHEA:46680" ]
null
[ "cytochrome b5 reductase activity", "dihydronicotinamide adenine dinucleotide-cytochrome b5 reductase activity", "NADH 5alpha-reductase activity", "NADH-cytochrome b5 reductase activity", "NADH-cytochrome-b5 reductase activity", "NADH-ferricytochrome b5 oxidoreductase activity", "NADH:ferricytochrome-b5...
[ "BROAD", "RELATED", "RELATED", "RELATED", "RELATED", "RELATED", "RELATED", "RELATED" ]
[]
[]
[ "EC:1.6.2.2", "MetaCyc:CYTOCHROME-B5-REDUCTASE-RXN", "RHEA:46680" ]
[ "GO:0004128" ]
[]
[]
[]
[ "GO:0004128" ]
[]
[]
[]
[]
[]
[ "skos:exactMatch EC:1.6.2.2", "skos:exactMatch RHEA:46680", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30105\" xsd:anyURI" ]
tb
2013-01-11T12:21:50Z
false
true
5
GO:0090527
90,527
obsolete actin filament reorganization
biological_process
OBSOLETE. A process that is carried out at the cellular level which results in dynamic structural changes to the arrangement of actin filaments.
[ "GOC:dph", "GOC:tb" ]
This term was obsoleted because it represents the same process as actin filament organization ; GO:0007015.
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/14087\" xsd:anyURI" ]
tb
2013-01-23T10:27:44Z
true
true
1
GO:0090528
90,528
smooth septate junction assembly
biological_process
The assembly of a smooth septate junction, a septate junction that lacks the regular arrays of electron-dense septae found in pleated septate junctions.
[ "PMID:22854041" ]
null
[]
[]
[]
[]
[]
[ "GO:0019991" ]
[]
[]
[]
[ "GO:0019991" ]
[]
[]
[]
[]
[]
[]
tb
2013-02-05T14:47:40Z
false
true
2
GO:0090529
90,529
cell septum assembly
biological_process
The assembly and arrangement of a cellular component that is composed of peptidoglycan and often chitin in addition to other materials and usually forms perpendicular to the long axis of a cell or hypha. It grows centripetally from the cell wall to the center of the cell and often functions in the compartmentalization ...
[ "GOC:mtg_cell_cycle" ]
null
[ "cell septum assembly involved in cell cycle cytokinesis" ]
[ "EXACT" ]
[ "GO:0090530" ]
[]
[]
[ "GO:0022607", "GO:0032506" ]
[]
[]
[]
[ "GO:0022607", "GO:0032506" ]
[]
[]
[]
[]
[]
[]
tb
2013-02-06T10:26:38Z
false
true
7
GO:0090531
90,531
L-ascorbic acid biosynthetic process via GDP-alpha-D-mannose
biological_process
The chemical reactions and pathways resulting in the formation of L-ascorbic acid via the intermediate GDP-alpha-D-mannose.
[ "MetaCyc:PWY-882", "PMID:11153268" ]
null
[ "L-ascorbic acid biosynthesis via GDP-alpha-D-mannose", "Smirnoff-Wheeler's pathway" ]
[ "RELATED", "RELATED" ]
[]
[]
[ "MetaCyc:PWY-882" ]
[ "GO:0019853" ]
[]
[]
[]
[ "GO:0019853" ]
[]
[]
[]
[]
[]
[ "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30233\" xsd:anyURI" ]
tb
2013-02-06T15:31:01Z
false
true
4
GO:0090532
90,532
L-ascorbic acid biosynthetic process via UDP-alpha-D-glucuronate
biological_process
The chemical reactions and pathways resulting in the formation of L-ascorbic acid via the intermediate UDP-alpha-D-glucuronate.
[ "GOC:yaf", "PMID:11153268" ]
This pathway occurs in most vertebrates, although not in guinea pigs and primates, including humans.
[ "L-ascorbic acid biosynthesis via UDP-alpha-D-glucuronate" ]
[ "RELATED" ]
[]
[]
[]
[ "GO:0019853" ]
[]
[]
[]
[ "GO:0019853" ]
[]
[]
[]
[]
[]
[]
tb
2013-02-06T15:31:01Z
false
true
7
GO:0090533
90,533
cation-transporting ATPase complex
cellular_component
Protein complex that carries out the reaction: ATP + H2O + cation(out) = ADP + phosphate + cation(in).
[ "GOC:BHF" ]
null
[]
[]
[]
[]
[]
[ "GO:0098533" ]
[]
[]
[]
[ "GO:0098533" ]
[]
[]
[]
[]
[]
[]
tb
2013-02-07T15:50:28Z
false
true
8
GO:0090534
90,534
calcium ion-transporting ATPase complex
cellular_component
Protein complex that carries out the reaction: ATP + H2O + Ca2+(out) = ADP + phosphate + Ca2+(in).
[ "GOC:BHF" ]
null
[]
[]
[]
[]
[]
[ "GO:0090533" ]
[]
[]
[]
[ "GO:0090533" ]
[]
[]
[]
[]
[]
[]
tb
2013-02-07T15:52:58Z
false
true
5
GO:0090535
90,535
WICH complex
cellular_component
An ISWI complex that contains an ATPase subunit of the ISWI family (specifically SNF2H in mammals, which contain two ISWI homologs) and WSTF (Williams Syndrome Transcription Factor). WICH plays roles in regulation of RNAP I and III transcription and in DNA replication and repair.
[ "GOC:krc", "PMID:15284901", "PMID:16568949", "PMID:21810179" ]
null
[]
[]
[]
[]
[]
[ "GO:0031010" ]
[]
[]
[]
[ "GO:0031010" ]
[]
[]
[]
[]
[]
[]
tb
2013-02-11T14:07:14Z
false
true
6
GO:0090536
90,536
NoRC complex
cellular_component
An ISWI complex that contains an ATPase subunit of the ISWI family (specifically SNF2H in mammals, which contain two ISWI homologs) and a Tip5 homolog. In mammals, NoRC is involved in regulation of transcription from RNAP I and RNA polymerase III promoters.
[ "GOC:krc" ]
null
[]
[]
[]
[]
[]
[ "GO:0031010" ]
[]
[]
[]
[ "GO:0031010" ]
[]
[]
[]
[]
[]
[]
tb
2013-02-11T14:07:14Z
false
true
1
GO:0090537
90,537
CERF complex
cellular_component
An ISWI complex that contains an ATPase subunit of the ISWI family (specifically SNF2L in mammals, which contain two ISWI homologs) and a CECR2 homolog. In mammals, CERF is involved in regulation of transcription from RNA polymerase II promoters.
[ "GOC:krc" ]
null
[]
[]
[]
[]
[]
[ "GO:0031010" ]
[]
[]
[]
[ "GO:0031010" ]
[]
[]
[]
[]
[]
[]
tb
2013-02-11T14:07:14Z
false
true
6
GO:0090539
90,539
peptide pheromone export by transmembrane transport
biological_process
The directed movement of a peptide pheromone across a membrane and out of a cell.
[ "GOC:al", "GOC:tb", "GOC:vw" ]
null
[ "peptide pheromone export by membrane transport" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0000770", "GO:0140115" ]
[]
[]
[]
[ "GO:0000770", "GO:0140115" ]
[]
[]
[]
[]
[]
[]
tb
2013-02-11T15:44:51Z
false
true
7
GO:0090540
90,540
bacterial cellulose biosynthetic process
biological_process
The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation, as it occurs in certain types of bacteria, mainly Acetobacter, Sarcina ventriculi and Agrobacteria.
[ "GOC:yaf", "PMID:24097954" ]
null
[ "bacterial cellulose biosynthesis" ]
[ "EXACT" ]
[]
[]
[]
[ "GO:0030244" ]
[]
[]
[]
[ "GO:0030244" ]
[]
[]
[]
[]
[]
[]
tb
2013-02-11T16:32:44Z
false
true
8
GO:0090541
90,541
MIT domain binding
molecular_function
Binding to a MIT protein domain. The MIT domain is found in vacuolar sorting proteins, spastin (probable ATPase involved in the assembly or function of nuclear protein complexes), and a sorting nexin, which may play a role in intracellular trafficking.
[ "GOC:pm", "InterPro:IPR007330" ]
null
[]
[]
[]
[]
[]
[ "GO:0019904" ]
[]
[]
[]
[ "GO:0019904" ]
[]
[]
[]
[]
[]
[]
tb
2013-02-14T17:11:29Z
false
true
1
GO:0090542
90,542
ELYC domain binding
molecular_function
Binding to a ELYC protein domain. The ELYC domain is an approximately 150 amino acid sequence which contains a highly conserved tetrapeptide sequence, ELYC.
[ "GOC:pm", "PMID:18032582", "PMID:19525971" ]
null
[]
[]
[]
[]
[]
[ "GO:0019904" ]
[]
[]
[]
[ "GO:0019904" ]
[]
[]
[]
[]
[]
[]
tb
2013-02-14T17:11:29Z
false
true
7
GO:0090543
90,543
Flemming body
cellular_component
A cell part that is the central region of the midbody characterized by a gap in alpha-tubulin staining. It is a dense structure of antiparallel microtubules from the central spindle in the middle of the intercellular bridge.
[ "GOC:pm", "PMID:18641129", "PMID:22522702" ]
null
[ "Midbody ring" ]
[ "RELATED" ]
[]
[]
[]
[ "GO:0110165" ]
[ "part_of GO:0030496" ]
[ "part_of" ]
[ "GO:0030496" ]
[ "GO:0030496", "GO:0110165" ]
[]
[]
[]
[]
[]
[]
tb
2013-02-14T17:24:43Z
false
true
5
GO:0090545
90,545
CHD-type complex
cellular_component
A SWI/SNF-type complex that contains a subunit from the CHD(Chromodomain helicase DNA-binding) family. The CHD family is characterized by two signature sequence motifs: tandem chromodomains located in the N-terminal region, and the SNF2-like ATPase domain located in the central region of the protein structure.
[ "GOC:krc", "GOC:tb", "PMID:17350655" ]
null
[]
[]
[]
[]
[]
[ "GO:0070603" ]
[]
[]
[]
[ "GO:0070603" ]
[]
[]
[]
[]
[]
[]
tb
2013-02-15T12:11:57Z
false
true
5
GO:0090546
90,546
chlorophyll fluorescence
biological_process
The process by which excess light energy absorbed by chlorophyll and not used to drive photosynthesis is re-emitted as light.
[ "PMID:10938857" ]
null
[]
[]
[]
[]
[]
[ "GO:1990066" ]
[]
[]
[]
[ "GO:1990066" ]
[]
[]
[]
[]
[]
[]
tb
2013-03-27T14:23:27Z
false
true
6
GO:0090547
90,547
response to low humidity
biological_process
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of low humidity stimulus, reduced moisture in the atmosphere.
[ "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0009270" ]
[]
[]
[]
[ "GO:0009270" ]
[]
[]
[]
[]
[]
[]
tb
2013-04-17T13:46:28Z
false
true
1
GO:0090548
90,548
response to nitrate starvation
biological_process
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of nitrate.
[ "GOC:tair_curators" ]
null
[]
[]
[]
[]
[]
[ "GO:0042594" ]
[]
[]
[]
[ "GO:0042594" ]
[]
[]
[]
[]
[]
[]
tb
2013-04-22T13:57:16Z
false
true
5
GO:0090549
90,549
response to carbon starvation
biological_process
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of a carbon source.
[ "GOC:tair_curators", "PMID:18245858" ]
null
[]
[]
[]
[]
[]
[ "GO:0042594" ]
[]
[]
[]
[ "GO:0042594" ]
[]
[]
[]
[]
[]
[]
tb
2013-04-22T13:57:16Z
false
true
1
GO:0090550
90,550
response to molybdenum starvation
biological_process
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of molybdenum.
[ "GOC:tair_curators" ]
null
[]
[]
[]
[]
[]
[ "GO:0042594" ]
[]
[]
[]
[ "GO:0042594" ]
[]
[]
[]
[]
[]
[]
tb
2013-04-22T13:57:16Z
false
true
5
GO:0090551
90,551
response to manganese ion starvation
biological_process
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of manganese.
[ "GOC:tair_curators" ]
null
[]
[]
[]
[]
[]
[ "GO:0180055" ]
[]
[]
[]
[ "GO:0180055" ]
[]
[]
[]
[]
[]
[]
tb
2013-04-22T13:57:16Z
false
true
3
GO:0090552
90,552
unicellular trichome apex
cellular_component
A cell projection part that is the apical most portion of a unicellular trichome.
[ "GOC:PO_curators", "PO:0025537" ]
null
[]
[]
[]
[]
[]
[ "GO:0110165" ]
[ "part_of GO:0042995" ]
[ "part_of" ]
[ "GO:0042995" ]
[ "GO:0042995", "GO:0110165" ]
[]
[]
[]
[]
[]
[]
tb
2013-04-25T11:56:56Z
false
true
7
GO:0090553
90,553
unicellular trichome tip
cellular_component
A cell projection part that is the apical most portion of a unicellular trichome apex.
[ "GOC:PO_curators" ]
null
[]
[]
[]
[]
[]
[ "GO:0110165" ]
[ "part_of GO:0090552" ]
[ "part_of" ]
[ "GO:0090552" ]
[ "GO:0090552", "GO:0110165" ]
[]
[]
[]
[]
[]
[]
tb
2013-04-25T11:56:56Z
false
true
6
GO:0090554
90,554
phosphatidylcholine floppase activity
molecular_function
Catalysis of the movement of phosphatidylcholine from the cytosolic to the exoplasmic leaflet of a membrane, using energy from the hydrolysis of ATP.
[ "GOC:ab", "PMID:16452632", "RHEA:38583" ]
null
[ "ATP-dependent phosphatidylcholine transporter activity", "ATPase-coupled phosphatidylcholine transporter activity", "phosphatidylcholine floppase activity (cytosolic to exoplasmic leaflet)", "phosphatidylcholine-translocating ATPase activity" ]
[ "BROAD", "BROAD", "EXACT", "BROAD" ]
[]
[]
[ "RHEA:38583" ]
[ "GO:0008525", "GO:0140328" ]
[]
[]
[]
[ "GO:0008525", "GO:0140328" ]
[]
[]
[]
[]
[]
[ "skos:broadMatch RHEA:66132", "skos:exactMatch RHEA:38583", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30193\" xsd:anyURI" ]
tb
2013-10-24T16:07:20Z
false
true
6
GO:0090556
90,556
phosphatidylserine floppase activity
molecular_function
Catalysis of the movement of phosphatidylserine from the cytosolic to the exoplasmic leaflet of a membrane, using energy from the hydrolysis of ATP.
[ "GOC:ab", "PMID:16452632", "PMID:20224745", "RHEA:38567" ]
null
[ "ATPase-coupled phosphatidylserine transporter activity", "ATPase-dependent phosphatidylserine transporter activity", "phosphatidylserine floppase activity (cytosolic to exoplasmic leaflet)", "phosphatidylserine-translocating ATPase activity" ]
[ "BROAD", "BROAD", "EXACT", "BROAD" ]
[]
[]
[ "RHEA:38567" ]
[ "GO:0140328" ]
[]
[]
[]
[ "GO:0140328" ]
[]
[]
[]
[]
[]
[ "skos:broadMatch RHEA:66132", "skos:exactMatch RHEA:38567", "term_tracker_item \"https://github.com/geneontology/go-ontology/issues/30193\" xsd:anyURI" ]
tb
2013-10-24T16:07:20Z
false
true
6
GO:0090557
90,557
establishment of endothelial intestinal barrier
biological_process
The establishment of a barrier between endothelial cell layers of the intestine to exert specific and selective control over the passage of water and solutes, thus allowing formation and maintenance of compartments that differ in fluid and solute composition.
[ "GOC:krc", "PMID:22155109" ]
null
[]
[]
[]
[]
[]
[ "GO:0061028" ]
[]
[]
[]
[ "GO:0061028" ]
[]
[]
[]
[]
[]
[]
tb
2013-10-29T15:08:27Z
false
true
8
GO:0090558
90,558
plant epidermis development
biological_process
The process whose specific outcome is the progression of the plant epidermis over time, from its formation to the mature structure.
[ "GOC:tb" ]
null
[]
[]
[]
[]
[]
[ "GO:0009888" ]
[]
[]
[]
[ "GO:0009888" ]
[]
[]
[]
[]
[]
[]
tb
2014-02-27T15:17:37Z
false
true
9
GO:0090559
90,559
regulation of membrane permeability
biological_process
Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by a membrane.
[ "GOC:kmv", "PMID:22677064" ]
null
[]
[]
[]
[]
[]
[ "GO:0065008" ]
[]
[]
[]
[ "GO:0065008" ]
[]
[]
[]
[]
[]
[]
tb
2014-03-27T13:48:35Z
false
true
6