interpro_id
string
interpro_numeric_id
int64
name
string
short_name
string
entry_type
string
protein_count
int64
is_llm
bool
is_llm_reviewed
bool
abstract
string
go_ids
list
go_terms
list
go_categories
list
go_count
int64
member_databases
list
member_accessions
list
member_names
list
member_protein_counts
list
member_count
int64
external_databases
list
external_accessions
list
external_xrefs
list
external_xref_count
int64
pdb_ids
list
structure_count
int64
publication_ids
list
pubmed_ids
list
publication_titles
list
publication_years
list
publication_count
int64
parent_ids
list
child_ids
list
parent_count
int64
child_count
int64
tree_depth
float64
taxonomy_names
list
taxonomy_protein_counts
list
taxonomy_count
int64
key_species_names
list
key_species_protein_counts
list
key_species_count
int64
in_entry_list
bool
entry_list_type
string
entry_list_name
string
names_dat_name
string
short_names_dat_name
string
split_bucket
int64
IPR022305
22,305
Sortase system response regulator
Response_regulator
Family
646
false
false
This entry describes a group of DNA-binding response regulator proteins that associate with histidine kinase ( ) to form a two-component system. This system co-occurs with a proteobacterial variant form of the protein sorting transpeptidase called sortase ( ), and a single target protein for the sortase.
[]
[]
[]
0
[ "NCBIFAM" ]
[ "TIGR03787" ]
[ "marine_sort_RR" ]
[ 646 ]
1
[ "GP" ]
[ "GenProp0859" ]
[ "GP:GenProp0859" ]
1
[]
0
[]
[]
[]
[]
0
[ "IPR039420" ]
[]
1
0
1
[ "Bacteria", "ecological metagenomes" ]
[ 631, 15 ]
2
[]
[]
0
true
Family
Sortase system response regulator
Sortase system response regulator
Response_regulator
1
IPR022307
22,307
DEAD/DEAH-box helicase, putative, actinobacteria
Helicase_put_actinobac
Family
3,485
false
false
A conserved gene neighbourhood widely spread in the Actinobacteria contains this uncharacterised DEAH-box family helicase. The operons are similar to operons encoding type II secretion and pilus formation proteins. The context suggests that this helicase may play a role in conjugal transfer of DNA.
[]
[]
[]
0
[ "NCBIFAM" ]
[ "TIGR03817" ]
[ "DECH_helic" ]
[ 3485 ]
1
[]
[]
[]
0
[]
0
[]
[]
[]
[]
0
[]
[]
0
0
null
[ "Bacillati", "Pleodorina starrii", "metagenomes" ]
[ 3459, 1, 25 ]
3
[]
[]
0
true
Family
DEAD/DEAH-box helicase, putative, actinobacteria
DEAD/DEAH-box helicase, putative, actinobacteria
Helicase_put_actinobac
7
IPR022308
22,308
Synaptic vesicle protein SV2
SV2
Family
3,348
false
false
SV2 proteins are abundant synaptic vesicle proteins expressed in two major (SV2A and SV2B) and one minor isoform (SV2C) that resemble transporter proteins. SV2B knockout mice are phenotypically normal while SV2A-and SV2A/SV2B double knockout mice exhibit severe seizures and die postnatally. Without SV2 proteins, presyn...
[ "GO:0007268", "GO:0016020" ]
[ "chemical synaptic transmission", "membrane" ]
[ "biological_process", "cellular_component" ]
2
[ "NCBIFAM" ]
[ "TIGR01299" ]
[ "synapt_SV2" ]
[ 3348 ]
1
[ "REACTOME", "REACTOME", "REACTOME", "REACTOME" ]
[ "R-HSA-5250955", "R-HSA-5250968", "R-HSA-5250981", "R-HSA-5250992" ]
[ "REACTOME:R-HSA-5250955", "REACTOME:R-HSA-5250968", "REACTOME:R-HSA-5250981", "REACTOME:R-HSA-5250992" ]
4
[ "8jlc", "8jlf", "8jlh", "8jli", "8js8", "8js9", "8k77", "8uo8", "8uo9", "8uoa", "8yf0", "8yf1", "9f1r", "9f2b", "9f2j", "9f2y", "9f3c", "9fyq", "9fyr", "9ntc", "9pc9", "9pcb" ]
22
[ "PUB00007920" ]
[ "10624962" ]
[ "SV2A and SV2B function as redundant Ca2+ regulators in neurotransmitter release." ]
[ 1999 ]
1
[ "IPR011701" ]
[]
1
0
1
[ "Chordata" ]
[ 3348 ]
1
[ "Danio rerio", "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]
[ 7, 5, 5, 11 ]
4
true
Family
Synaptic vesicle protein SV2
Synaptic vesicle protein SV2
SV2
6
IPR022309
22,309
Ribosomal protein eS8/ribosomal biogenesis NSA2
Ribosomal_Se8/biogenesis_NSA2
Family
13,423
false
false
This entry represents the small ribosomal subunit protein eS8 from archaea and eukaryotes [ , ], which consists of a number of proteins with either about 220 amino acids (in eukaryotes) or about 125 amino acids (in archaea). This entry also contains proteins annotated as NSA2, which are though to be involved in ribosom...
[]
[]
[]
0
[ "PFAM" ]
[ "PF01201" ]
[ "Ribosomal_S8e" ]
[ 13423 ]
1
[ "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOM...
[ "R-BTA-156827", "R-BTA-1799339", "R-BTA-6791226", "R-BTA-72649", "R-BTA-72689", "R-BTA-72695", "R-BTA-72702", "R-BTA-72706", "R-BTA-975956", "R-BTA-975957", "R-CEL-156827", "R-CEL-1799339", "R-CEL-72649", "R-CEL-72689", "R-CEL-72695", "R-CEL-72702", "R-CEL-72706", "R-CEL-975956", ...
[ "REACTOME:R-BTA-156827", "REACTOME:R-BTA-1799339", "REACTOME:R-BTA-6791226", "REACTOME:R-BTA-72649", "REACTOME:R-BTA-72689", "REACTOME:R-BTA-72695", "REACTOME:R-BTA-72702", "REACTOME:R-BTA-72706", "REACTOME:R-BTA-975956", "REACTOME:R-BTA-975957", "REACTOME:R-CEL-156827", "REACTOME:R-CEL-179933...
92
[ "2kco", "2kcp", "2kcy", "2mvf", "3j6x", "3j6y", "3j77", "3j78", "3j7a", "3j7p", "3j7r", "3j80", "3j81", "3jag", "3jah", "3jai", "3jaj", "3jam", "3jan", "3jap", "3jbn", "3jbo", "3jbp", "3jct", "4bts", "4d5l", "4d61", "4kzx", "4kzy", "4kzz", "4u3m", "4u3n"...
724
[ "PUB00003471", "PUB00110894" ]
[ "7662106", "23636399" ]
[ "Amino acid sequence of the ribosomal protein HS23 from the halophilic Haloarcula marismortui and homology studies to other ribosomal proteins.", "Structures of the human and Drosophila 80S ribosome." ]
[ 1995, 2013 ]
2
[]
[ "IPR001047", "IPR039411" ]
0
2
0
[ "Archaea", "Bacteria", "Eukaryota", "ecological metagenomes" ]
[ 895, 8, 12483, 37 ]
4
[ "Arabidopsis thaliana", "Caenorhabditis elegans", "Danio rerio", "Drosophila melanogaster", "Homo sapiens", "Mus musculus", "Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)", "Oryza sativa subsp. japonica", "Rattus norvegicus", "Saccharomyces cerevisiae (strai...
[ 10, 3, 4, 3, 7, 10, 2, 6, 11, 3, 3, 39 ]
12
true
Family
Ribosomal protein eS8/ribosomal biogenesis NSA2
Ribosomal protein eS8/ribosomal biogenesis NSA2
Ribosomal_Se8/biogenesis_NSA2
1
IPR022310
22,310
NAD/GMP synthase
NAD/GMP_synthase
Domain
65,161
false
false
NAD+ synthase ( ) catalyzes the last step in the biosynthesis of nicotinamide adenine dinucleotide and is induced by stress factors such as heat shock and glucose limitation. The three-dimensional structure of NH3-dependent NAD+ synthetase from Bacillus subtilis, in its free form and in complex with ATP shows that the ...
[]
[]
[]
0
[ "PFAM" ]
[ "PF02540" ]
[ "NAD_synthase" ]
[ 65161 ]
1
[ "EC", "GP", "METACYC", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTO...
[ "6.3.5.2", "GenProp1650", "PWY-7221", "R-BTA-196807", "R-CEL-73817", "R-CEL-9748787", "R-DDI-196807", "R-DDI-73817", "R-DDI-9748787", "R-DME-196807", "R-HSA-196807", "R-HSA-73817", "R-HSA-9748787", "R-MMU-196807", "R-MMU-73817", "R-MMU-9748787", "R-PFA-73817", "R-PFA-9748787", "R...
[ "EC:6.3.5.2", "GP:GenProp1650", "METACYC:PWY-7221", "REACTOME:R-BTA-196807", "REACTOME:R-CEL-73817", "REACTOME:R-CEL-9748787", "REACTOME:R-DDI-196807", "REACTOME:R-DDI-73817", "REACTOME:R-DDI-9748787", "REACTOME:R-DME-196807", "REACTOME:R-HSA-196807", "REACTOME:R-HSA-73817", "REACTOME:R-HSA-...
25
[ "1ee1", "1fyd", "1gpm", "1ifx", "1ih8", "1kqp", "1nsy", "1wxe", "1wxf", "1wxg", "1wxh", "1wxi", "1xng", "1xnh", "2dpl", "2e18", "2nsy", "2pz8", "2pza", "2pzb", "2vxo", "3a4i", "3dla", "3dpi", "3fiu", "3hmq", "3ilv", "3n05", "3p52", "3q4g", "3sdb", "3seq"...
75
[ "PUB00008175" ]
[ "8895556" ]
[ "Crystal structure of NH3-dependent NAD+ synthetase from Bacillus subtilis." ]
[ 1996 ]
1
[]
[ "IPR025777" ]
0
1
0
[ "Archaea", "Bacteria", "Eukaryota", "Viruses", "unclassified sequences" ]
[ 2290, 52133, 9362, 24, 1352 ]
5
[ "Arabidopsis thaliana", "Caenorhabditis elegans", "Danio rerio", "Drosophila melanogaster", "Escherichia coli (strain K12)", "Homo sapiens", "Mus musculus", "Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)", "Oryza sativa subsp. japonica", "Rattus norvegicus",...
[ 3, 4, 2, 5, 2, 7, 4, 2, 3, 13, 2, 1, 19 ]
13
true
Domain
NAD/GMP synthase
NAD/GMP synthase
NAD/GMP_synthase
3
IPR022312
22,312
DNA polymerase family X
DNA_pol_X
Family
11,292
false
false
Family X DNA polymerases (PolX) are involved in DNA repair, being evolutionarily conserved in prokaryotes, eukaryotes and archaea. All DNA polymerases from this family are single-subunit enzymes, lacking the 3'-5' exonuclease activity and displaying very low processivity during primer extension reactions [ ]. Proteins ...
[ "GO:0003677", "GO:0003887", "GO:0006281" ]
[ "DNA binding", "DNA-directed DNA polymerase activity", "DNA repair" ]
[ "molecular_function", "molecular_function", "biological_process" ]
3
[ "PRINTS", "PANTHER" ]
[ "PR00869", "PTHR11276" ]
[ "DNAPOLX", "" ]
[ 9306, 10817 ]
2
[ "EC", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", ...
[ "2.7.7.7", "R-BTA-110362", "R-BTA-110373", "R-BTA-110381", "R-BTA-5649702", "R-BTA-5651801", "R-BTA-5689880", "R-BTA-73930", "R-DRE-110362", "R-DRE-110373", "R-DRE-5649702", "R-DRE-73930", "R-HSA-110362", "R-HSA-110373", "R-HSA-110381", "R-HSA-5649702", "R-HSA-5651801", "R-HSA-5689...
[ "EC:2.7.7.7", "REACTOME:R-BTA-110362", "REACTOME:R-BTA-110373", "REACTOME:R-BTA-110381", "REACTOME:R-BTA-5649702", "REACTOME:R-BTA-5651801", "REACTOME:R-BTA-5689880", "REACTOME:R-BTA-73930", "REACTOME:R-DRE-110362", "REACTOME:R-DRE-110373", "REACTOME:R-DRE-5649702", "REACTOME:R-DRE-73930", "...
36
[ "1bno", "1bnp", "1bpb", "1bpd", "1bpe", "1bpx", "1bpy", "1bpz", "1dk2", "1dk3", "1huo", "1huz", "1jaj", "1jms", "1jn3", "1jqr", "1kdh", "1kej", "1mq2", "1mq3", "1nom", "1nzp", "1rpl", "1rzt", "1tv9", "1tva", "1xsl", "1xsn", "1xsp", "1zjm", "1zjn", "1zqa"...
743
[ "PUB00004647", "PUB00004955", "PUB00039714", "PUB00097985", "PUB00097986", "PUB00097987", "PUB00097988", "PUB00097989" ]
[ "3479792", "2196557", "7516580", "16120966", "15588842", "30005324", "28811466", "27481934" ]
[ "Bacteriophage PRD1 DNA polymerase: evolution of DNA polymerases.", "An attempt to unify the structure of polymerases.", "Structures of ternary complexes of rat DNA polymerase beta, a DNA template-primer, and ddCTP.", "Characterization of SpPol4, a unique X-family DNA polymerase in Schizosaccharomyces pombe."...
[ 1987, 1990, 1994, 2005, 2004, 2018, 2017, 2016 ]
8
[]
[ "IPR001726", "IPR002008" ]
0
2
0
[ "Archaea", "Bacteria", "Eukaryota", "Viruses", "metagenomes" ]
[ 25, 840, 10020, 97, 310 ]
5
[ "Arabidopsis thaliana", "Danio rerio", "Homo sapiens", "Mus musculus", "Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)", "Oryza sativa subsp. japonica", "Rattus norvegicus", "Saccharomyces cerevisiae (strain ATCC 204508 / S288c)", "Schizosaccharomyces pombe (st...
[ 5, 12, 38, 9, 2, 2, 15, 1, 1, 9 ]
10
true
Family
DNA polymerase family X
DNA polymerase family X
DNA_pol_X
1
IPR022313
22,313
Phenylalanine/histidine ammonia-lyases, active site
Phe/His_NH3-lyase_AS
Active_site
23,774
false
false
This entry represents the active site of phenylalanine ammonia-lyase (PAL; ) and the mechanistically related protein histidine ammonia lyase (HAL; ). Both contain a catalytic Ala-Ser-Gly triad that is post-translationally cyclised [ ]. PAL is a key biosynthetic catalyst in phenylpropanoid assembly in plants and fungi, ...
[ "GO:0016841" ]
[ "ammonia-lyase activity" ]
[ "molecular_function" ]
1
[ "PROSITE" ]
[ "PS00488" ]
[ "PAL_HISTIDASE" ]
[ 23774 ]
1
[ "EC", "EC", "METACYC", "METACYC", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME" ]
[ "4.3.1", "4.3.1.3", "PWY-5028", "PWY-5030", "R-BTA-70921", "R-CEL-70921", "R-DDI-70921", "R-HSA-70921", "R-MMU-70921", "R-RNO-70921" ]
[ "EC:4.3.1", "EC:4.3.1.3", "METACYC:PWY-5028", "METACYC:PWY-5030", "REACTOME:R-BTA-70921", "REACTOME:R-CEL-70921", "REACTOME:R-DDI-70921", "REACTOME:R-HSA-70921", "REACTOME:R-MMU-70921", "REACTOME:R-RNO-70921" ]
10
[ "1b8f", "1eb4", "1gk2", "1gkj", "1gkm", "1t6j", "1t6p", "1w27", "1y2m", "2nyf", "2nyn", "2o6y", "2o78", "2o7b", "2o7d", "2o7e", "2o7f", "2ohy", "2qve", "2rjr", "2rjs", "2yii", "3czo", "3kdy", "3kdz", "3nz4", "4baa", "4bab", "4c5r", "4c5s", "4c5u", "4c6g"...
43
[ "PUB00000402", "PUB00001676", "PUB00002585", "PUB00002875", "PUB00031359", "PUB00035855" ]
[ "8204579", "8050576", "2120224", "7961661", "15350127", "16478474" ]
[ "Identification of serine-143 as the most likely precursor of dehydroalanine in the active site of histidine ammonia-lyase. A study of the overexpressed enzyme by site-directed mutagenesis.", "Serine-202 is the putative precursor of the active site dehydroalanine of phenylalanine ammonia lyase. Site-directed muta...
[ 1994, 1994, 1990, 1994, 2004, 2006 ]
6
[]
[]
0
0
null
[ "Archaea", "Bacteria", "Eukaryota", "Mimiviridae", "unclassified sequences" ]
[ 212, 16544, 6820, 2, 196 ]
5
[ "Arabidopsis thaliana", "Caenorhabditis elegans", "Danio rerio", "Homo sapiens", "Mus musculus", "Oryza sativa subsp. japonica", "Rattus norvegicus", "Zea mays" ]
[ 13, 1, 7, 3, 3, 21, 2, 40 ]
8
true
Active_site
Phenylalanine/histidine ammonia-lyases, active site
Phenylalanine/histidine ammonia-lyases, active site
Phe/His_NH3-lyase_AS
5
IPR022314
22,314
Tyrosine 2,3-aminomutase, putative
Tyr_aminomutase
Family
135
false
false
This entry includes tyrosine 2,3-aminomutase and histidine ammonia-lyase. It is variable from member to member as to whether the (R)-beta-Tyr or (S)-beta-Tyr is the preferred product from L-Tyr. This enzyme tends to occur in secondary metabolite biosynthesis systems, as in the production of chondramides in Chondromyces...
[]
[]
[]
0
[ "NCBIFAM" ]
[ "TIGR03832" ]
[ "Tyr_2_3_mutase" ]
[ 135 ]
1
[ "EC", "EC" ]
[ "4.3.1.23", "5.4.3.6" ]
[ "EC:4.3.1.23", "EC:5.4.3.6" ]
2
[ "2ohy", "2qve", "2rjr", "2rjs", "3kdy", "3kdz" ]
6
[]
[]
[]
[]
0
[ "IPR001106" ]
[]
1
0
1
[ "Bacteria" ]
[ 135 ]
1
[]
[]
0
true
Family
Tyrosine 2,3-aminomutase, putative
Tyrosine 2,3-aminomutase, putative
Tyr_aminomutase
3
IPR022315
22,315
F420-dependent oxidoreductase-predicted, CPS4043
F420_OxRdatse_CPS4043_pred
Family
2,071
false
false
This entry represents a group of putative F420-dependent oxidoreductases, fairly closely related to 5,10-methylenetetrahydromethanopterin reductase (mer, ). A fairly deep split (to about 40 % sequence identity) in the present family separates a strictly Actinobacterial clade from an alpha/beta/gamma-proteobacterial cla...
[]
[]
[]
0
[ "NCBIFAM" ]
[ "TIGR03842" ]
[ "F420_CPS_4043" ]
[ 2071 ]
1
[ "GP" ]
[ "GenProp0002" ]
[ "GP:GenProp0002" ]
1
[]
0
[]
[]
[]
[]
0
[]
[]
0
0
null
[ "Bacteria", "Halobacteriales", "ecological metagenomes" ]
[ 2039, 2, 30 ]
3
[]
[]
0
true
Family
F420-dependent oxidoreductase-predicted, CPS4043
F420-dependent oxidoreductase-predicted, CPS4043
F420_OxRdatse_CPS4043_pred
1
IPR022316
22,316
Tumour necrosis factor receptor 12
TNFR_12
Family
415
false
false
The tumour necrosis factor (TNF) receptor (TNFR) superfamily comprises more than 20 type-I transmembrane proteins. Family members are defined based on similarity in their extracellular domain - a region that contains many cysteine residues arranged in a specific repetitive pattern [ ]. The cysteines allow formation of ...
[ "GO:0005515", "GO:0043065", "GO:0005886" ]
[ "protein binding", "positive regulation of apoptotic process", "plasma membrane" ]
[ "molecular_function", "biological_process", "cellular_component" ]
3
[ "PFAM", "PRINTS", "PANTHER", "CDD" ]
[ "PF12191", "PR01962", "PTHR32037", "cd13413" ]
[ "stn_TNFRSF12A", "TNFACTORR12", "", "TNFRSF12A" ]
[ 409, 242, 348, 149 ]
4
[ "REACTOME", "REACTOME", "REACTOME", "REACTOME" ]
[ "R-HSA-5668541", "R-HSA-5676594", "R-MMU-5668541", "R-MMU-5676594" ]
[ "REACTOME:R-HSA-5668541", "REACTOME:R-HSA-5676594", "REACTOME:R-MMU-5668541", "REACTOME:R-MMU-5676594" ]
4
[ "2eqp", "2kmz", "2kn0", "2rpj" ]
4
[ "PUB00000892", "PUB00046030", "PUB00046031", "PUB00046032", "PUB00046034", "PUB00053596", "PUB00082433", "PUB00082434" ]
[ "8387891", "7917108", "15500863", "11239407", "9826574", "11728344", "24478772", "18404150" ]
[ "Crystal structure of the soluble human 55 kd TNF receptor-human TNF beta complex: implications for TNF receptor activation.", "Tumor necrosis factor receptor superfamily members and their ligands.", "Assembly of post-receptor signaling complexes for the tumor necrosis factor receptor superfamily.", "The TNF ...
[ 1993, 1994, 2004, 2001, 1998, 2001, 2014, 2008 ]
8
[]
[]
0
0
null
[ "Opisthokonta" ]
[ 415 ]
1
[ "Danio rerio", "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]
[ 1, 5, 3, 5 ]
4
true
Family
Tumour necrosis factor receptor 12
Tumour necrosis factor receptor 12
TNFR_12
7
IPR022317
22,317
Tumour necrosis factor receptor 13B
TNFR_13B
Family
828
false
false
The tumour necrosis factor (TNF) receptor (TNFR) superfamily comprises more than 20 type-I transmembrane proteins. Family members are defined based on similarity in their extracellular domain -a region that contains many cysteine residues arranged in a specific repetitive pattern [ ]. The cysteines allow formation of a...
[ "GO:0005886" ]
[ "plasma membrane" ]
[ "cellular_component" ]
1
[ "PRINTS", "PANTHER", "CDD" ]
[ "PR01963", "PTHR15511", "cd13415" ]
[ "TNFACTORR13B", "", "TNFRSF13B" ]
[ 621, 828, 210 ]
3
[ "REACTOME", "REACTOME" ]
[ "R-HSA-5669034", "R-MMU-5669034" ]
[ "REACTOME:R-HSA-5669034", "REACTOME:R-MMU-5669034" ]
2
[ "1xu1", "1xut" ]
2
[ "PUB00000892", "PUB00033576", "PUB00046030", "PUB00046031", "PUB00046032", "PUB00046033", "PUB00046034", "PUB00053598" ]
[ "8387891", "10801128", "7917108", "15500863", "11239407", "9826575", "9826574", "16007086" ]
[ "Crystal structure of the soluble human 55 kd TNF receptor-human TNF beta complex: implications for TNF receptor activation.", "TACI and BCMA are receptors for a TNF homologue implicated in B-cell autoimmune disease.", "Tumor necrosis factor receptor superfamily members and their ligands.", "Assembly of post-...
[ 1993, 2000, 1994, 2004, 2001, 1998, 1998, 2005 ]
8
[]
[]
0
0
null
[ "Bilateria" ]
[ 828 ]
1
[ "Danio rerio", "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]
[ 2, 6, 6, 2 ]
4
true
Family
Tumour necrosis factor receptor 13B
Tumour necrosis factor receptor 13B
TNFR_13B
2
IPR022319
22,319
Tumour necrosis factor receptor 27
TNFR_27
Family
571
false
false
TNF receptor 27 (also known as ectodysplasin A2 receptor (EDA2R) and ectodysplasin receptor, x-linked (XEDAR)) is highly expressed during embryogenesis [ ], and has been implicated in the development of ectodermal appendages, such as hair follicles, teeth and sweat glands [ ]. Although it lacks a death domain, the rece...
[ "GO:0005031", "GO:0033209", "GO:0005886" ]
[ "tumor necrosis factor receptor activity", "tumor necrosis factor-mediated signaling pathway", "plasma membrane" ]
[ "molecular_function", "biological_process", "cellular_component" ]
3
[ "PRINTS" ]
[ "PR01973" ]
[ "TNFACTORR27" ]
[ 571 ]
1
[ "REACTOME", "REACTOME" ]
[ "R-HSA-5669034", "R-MMU-5669034" ]
[ "REACTOME:R-HSA-5669034", "REACTOME:R-MMU-5669034" ]
2
[]
0
[ "PUB00000892", "PUB00046030", "PUB00046031", "PUB00046032", "PUB00046033", "PUB00046034", "PUB00053600", "PUB00053601" ]
[ "8387891", "7917108", "15500863", "11239407", "9826575", "9826574", "15280356", "17362907" ]
[ "Crystal structure of the soluble human 55 kd TNF receptor-human TNF beta complex: implications for TNF receptor activation.", "Tumor necrosis factor receptor superfamily members and their ligands.", "Assembly of post-receptor signaling complexes for the tumor necrosis factor receptor superfamily.", "The TNF ...
[ 1993, 1994, 2004, 2001, 1998, 1998, 2004, 2007 ]
8
[ "IPR047526" ]
[]
1
0
1
[ "Euteleostomi" ]
[ 571 ]
1
[ "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]
[ 3, 2, 3 ]
3
true
Family
Tumour necrosis factor receptor 27
Tumour necrosis factor receptor 27
TNFR_27
9
IPR022320
22,320
Tumour necrosis factor receptor 17
TNFR_17
Family
340
false
false
The tumour necrosis factor (TNF) receptor (TNFR) superfamily comprises more than 20 type-I transmembrane proteins. Family members are defined based on similarity in their extracellular domain - a region that contains many cysteine residues arranged in a specific repetitive pattern [ ]. The cysteines allow formation of ...
[ "GO:0038023", "GO:0033209" ]
[ "signaling receptor activity", "tumor necrosis factor-mediated signaling pathway" ]
[ "molecular_function", "biological_process" ]
2
[ "PIRSF", "PRINTS", "CDD" ]
[ "PIRSF011859", "PR01967", "cd13414" ]
[ "BCMA_Tall-1_bd", "TNFACTORR17", "TNFRSF17" ]
[ 9, 336, 197 ]
3
[ "REACTOME", "REACTOME" ]
[ "R-HSA-5669034", "R-MMU-5669034" ]
[ "REACTOME:R-HSA-5669034", "REACTOME:R-MMU-5669034" ]
2
[]
0
[ "PUB00000892", "PUB00046030", "PUB00046031", "PUB00046032", "PUB00046034", "PUB00053608", "PUB00053609" ]
[ "8387891", "7917108", "15500863", "11239407", "9826574", "14764606", "8165126" ]
[ "Crystal structure of the soluble human 55 kd TNF receptor-human TNF beta complex: implications for TNF receptor activation.", "Tumor necrosis factor receptor superfamily members and their ligands.", "Assembly of post-receptor signaling complexes for the tumor necrosis factor receptor superfamily.", "The TNF ...
[ 1993, 1994, 2004, 2001, 1998, 2004, 1994 ]
7
[ "IPR043521" ]
[]
1
0
1
[ "Tetrapoda" ]
[ 340 ]
1
[ "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]
[ 2, 1, 2 ]
3
true
Family
Tumour necrosis factor receptor 17
Tumour necrosis factor receptor 17
TNFR_17
5
IPR022321
22,321
Insulin-like growth factor-binding protein family 1-6, chordata
IGFBP_1-6_chordata
Family
5,958
false
false
Insulin-like growth factors (IGFs)-I and -II are small secreted peptides that stimulate the survival, and promote the proliferation and differentiation, of many cell types [ ]. In biological fluids, these growth factors are usually bound to IGF-binding proteins (IGFBPs), which regulate their availability and activity b...
[ "GO:0005520", "GO:0005576" ]
[ "insulin-like growth factor binding", "extracellular region" ]
[ "molecular_function", "cellular_component" ]
2
[ "PRINTS" ]
[ "PR01976" ]
[ "IGFBPFAMILY" ]
[ 5958 ]
1
[ "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME" ]
[ "R-BTA-381426", "R-BTA-6803211", "R-BTA-8957275", "R-DRE-381426", "R-HSA-380994", "R-HSA-381426", "R-HSA-6803211", "R-HSA-8957275", "R-HSA-9615017", "R-MMU-381426", "R-MMU-6803211", "R-MMU-8957275", "R-RNO-381426", "R-RNO-6803211", "R-RNO-8957275", "R-SSC-381426", "R-XTR-381426" ]
[ "REACTOME:R-BTA-381426", "REACTOME:R-BTA-6803211", "REACTOME:R-BTA-8957275", "REACTOME:R-DRE-381426", "REACTOME:R-HSA-380994", "REACTOME:R-HSA-381426", "REACTOME:R-HSA-6803211", "REACTOME:R-HSA-8957275", "REACTOME:R-HSA-9615017", "REACTOME:R-MMU-381426", "REACTOME:R-MMU-6803211", "REACTOME:R-M...
17
[ "1boe", "1h59", "1rmj", "1wqj", "1zt3", "1zt5", "2dsp", "2dsq", "2dsr", "2h7t", "7ufg", "7wrq" ]
12
[ "PUB00053602", "PUB00053603", "PUB00053604", "PUB00053605", "PUB00053606", "PUB00053607" ]
[ "8874492", "10605625", "7504671", "7499327", "7544787", "9115291" ]
[ "Growth, differentiation, and survival: multiple physiological functions for insulin-like growth factors.", "The insulin-like growth factor-binding protein (IGFBP) superfamily.", "Demonstration of receptors for insulin-like growth factor binding protein-3 on Hs578T human breast cancer cells.", "Heparin modula...
[ 1996, 1999, 1993, 1995, 1995, 1997 ]
6
[]
[ "IPR012210", "IPR012211", "IPR012213", "IPR022322", "IPR022326", "IPR022327" ]
0
6
0
[ "Bilateria" ]
[ 5958 ]
1
[ "Danio rerio", "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]
[ 15, 31, 15, 20 ]
4
true
Family
Insulin-like growth factor-binding protein family 1-6, chordata
Insulin-like growth factor-binding protein family 1-6, chordata
IGFBP_1-6_chordata
2
IPR022322
22,322
Insulin-like growth factor-binding protein 1
IGFBP1
Family
1,058
false
false
Insulin-like growth factors (IGFs)-I and -II are small secreted peptides that stimulate the survival, and promote the proliferation and differentiation, of many cell types [ ]. In biological fluids, these growth factors are usually bound to IGF binding proteins (IGFBPs), which regulate their availability and activity b...
[ "GO:0005520", "GO:0005576" ]
[ "insulin-like growth factor binding", "extracellular region" ]
[ "molecular_function", "cellular_component" ]
2
[ "PRINTS" ]
[ "PR01977" ]
[ "IGFBPFAMILY1" ]
[ 1058 ]
1
[ "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME" ]
[ "R-BTA-381426", "R-BTA-8957275", "R-HSA-380994", "R-HSA-381426", "R-HSA-8957275", "R-HSA-9615017", "R-MMU-381426", "R-MMU-8957275", "R-RNO-381426", "R-RNO-8957275" ]
[ "REACTOME:R-BTA-381426", "REACTOME:R-BTA-8957275", "REACTOME:R-HSA-380994", "REACTOME:R-HSA-381426", "REACTOME:R-HSA-8957275", "REACTOME:R-HSA-9615017", "REACTOME:R-MMU-381426", "REACTOME:R-MMU-8957275", "REACTOME:R-RNO-381426", "REACTOME:R-RNO-8957275" ]
10
[ "1zt3", "1zt5", "2dsq" ]
3
[ "PUB00053602", "PUB00053603", "PUB00053604", "PUB00053605", "PUB00053606", "PUB00053607", "PUB00053610", "PUB00053611" ]
[ "8874492", "10605625", "7504671", "7499327", "7544787", "9115291", "7505470", "12511596" ]
[ "Growth, differentiation, and survival: multiple physiological functions for insulin-like growth factors.", "The insulin-like growth factor-binding protein (IGFBP) superfamily.", "Demonstration of receptors for insulin-like growth factor binding protein-3 on Hs578T human breast cancer cells.", "Heparin modula...
[ 1996, 1999, 1993, 1995, 1995, 1997, 1993, 2003 ]
8
[ "IPR022321" ]
[]
1
0
1
[ "Vertebrata" ]
[ 1058 ]
1
[ "Danio rerio", "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]
[ 4, 5, 1, 3 ]
4
true
Family
Insulin-like growth factor-binding protein 1
Insulin-like growth factor-binding protein 1
IGFBP1
7
IPR022323
22,323
Tumour necrosis factor receptor 11
TNFR_11
Family
776
false
false
The tumour necrosis factor (TNF) receptor (TNFR) superfamily comprises more than 20 type-I transmembrane proteins. Family members are defined based on similarity in their extracellular domain -a region that contains many cysteine residues arranged in a specific repetitive pattern [ ]. The cysteines allow formation of a...
[]
[]
[]
0
[ "PRINTS" ]
[ "PR01961" ]
[ "TNFACTORR11" ]
[ 776 ]
1
[ "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME" ]
[ "R-BTA-5669034", "R-HSA-5668541", "R-HSA-5669034", "R-HSA-5676594", "R-MMU-5668541", "R-MMU-5669034", "R-MMU-5676594", "R-RNO-5669034" ]
[ "REACTOME:R-BTA-5669034", "REACTOME:R-HSA-5668541", "REACTOME:R-HSA-5669034", "REACTOME:R-HSA-5676594", "REACTOME:R-MMU-5668541", "REACTOME:R-MMU-5669034", "REACTOME:R-MMU-5676594", "REACTOME:R-RNO-5669034" ]
8
[ "3urf", "4e4d" ]
2
[ "PUB00000892", "PUB00046030", "PUB00046031", "PUB00046032", "PUB00046033", "PUB00046034", "PUB00053612", "PUB00053613" ]
[ "8387891", "7917108", "15500863", "11239407", "9826575", "9826574", "9878548", "11485016" ]
[ "Crystal structure of the soluble human 55 kd TNF receptor-human TNF beta complex: implications for TNF receptor activation.", "Tumor necrosis factor receptor superfamily members and their ligands.", "Assembly of post-receptor signaling complexes for the tumor necrosis factor receptor superfamily.", "The TNF ...
[ 1993, 1994, 2004, 2001, 1998, 1998, 1998, 2001 ]
8
[]
[ "IPR017371" ]
0
1
0
[ "Gnathostomata" ]
[ 776 ]
1
[ "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]
[ 2, 4, 5 ]
3
true
Family
Tumour necrosis factor receptor 11
Tumour necrosis factor receptor 11
TNFR_11
4
IPR022324
22,324
Bacilysin exporter BacE, putative
Bacilysin_exporter_BacE_put
Family
6,473
false
false
The so-called putative bacilysin exporter, bacE, part of the bacilysin biosynthesis operon, has been shown to be involved in self-protection to bacilysin [ ] by permitting efflux of this antibiotic.
[ "GO:0016020" ]
[ "membrane" ]
[ "cellular_component" ]
1
[ "PRINTS" ]
[ "PR01988" ]
[ "EXPORTERBACE" ]
[ 6473 ]
1
[]
[]
[]
0
[]
0
[ "PUB00007278", "PUB00007279", "PUB00053614" ]
[ "9529885", "9868370", "15609023" ]
[ "Major facilitator superfamily.", "Sugar transporters from bacteria, parasites and mammals: structure-activity relationships.", "bac genes for recombinant bacilysin and anticapsin production in Bacillus host strains." ]
[ 1998, 1998, 2005 ]
3
[ "IPR011701" ]
[]
1
0
1
[ "Archaea", "Bacteria", "Eukaryota", "metagenomes" ]
[ 57, 6235, 92, 89 ]
4
[]
[]
0
true
Family
Bacilysin exporter BacE, putative
Bacilysin exporter BacE, putative
Bacilysin_exporter_BacE_put
8
IPR022325
22,325
Tumour necrosis factor receptor 16
TNFR_16
Family
1,085
false
false
The tumour necrosis factor (TNF) receptor (TNFR) superfamily comprises more than 20 type-I transmembrane proteins. Family members are defined based on similarity in their extracellular domain -a region that contains many cysteine residues arranged in a specific repetitive pattern [ ]. The cysteines allow formation of a...
[]
[]
[]
0
[ "PRINTS" ]
[ "PR01966" ]
[ "TNFACTORR16" ]
[ 1085 ]
1
[ "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOM...
[ "R-GGA-193692", "R-GGA-205017", "R-GGA-205043", "R-GGA-209543", "R-GGA-209560", "R-GGA-209563", "R-HSA-193634", "R-HSA-193648", "R-HSA-193670", "R-HSA-193681", "R-HSA-193692", "R-HSA-205017", "R-HSA-205025", "R-HSA-205043", "R-HSA-209543", "R-HSA-209560", "R-HSA-209563", "R-MMU-193...
[ "REACTOME:R-GGA-193692", "REACTOME:R-GGA-205017", "REACTOME:R-GGA-205043", "REACTOME:R-GGA-209543", "REACTOME:R-GGA-209560", "REACTOME:R-GGA-209563", "REACTOME:R-HSA-193634", "REACTOME:R-HSA-193648", "REACTOME:R-HSA-193670", "REACTOME:R-HSA-193681", "REACTOME:R-HSA-193692", "REACTOME:R-HSA-205...
33
[ "1sg1", "3buk", "3ij2" ]
3
[ "PUB00000892", "PUB00046030", "PUB00046031", "PUB00046032", "PUB00046033", "PUB00046034", "PUB00053615", "PUB00053616" ]
[ "8387891", "7917108", "15500863", "11239407", "9826575", "9826574", "18199491", "17716721" ]
[ "Crystal structure of the soluble human 55 kd TNF receptor-human TNF beta complex: implications for TNF receptor activation.", "Tumor necrosis factor receptor superfamily members and their ligands.", "Assembly of post-receptor signaling complexes for the tumor necrosis factor receptor superfamily.", "The TNF ...
[ 1993, 1994, 2004, 2001, 1998, 1998, 2008, 2007 ]
8
[]
[]
0
0
null
[ "Bilateria" ]
[ 1085 ]
1
[ "Danio rerio", "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]
[ 6, 1, 2, 4 ]
4
true
Family
Tumour necrosis factor receptor 16
Tumour necrosis factor receptor 16
TNFR_16
4
IPR022326
22,326
Insulin-like growth factor-binding protein 6
IGFBP-6
Family
414
false
false
Insulin-like growth factors (IGFs)-I and -II are small secreted peptides that stimulate the survival, and promote the proliferation and differentiation, of many cell types [ ]. In biological fluids, these growth factors are usually bound to IGF binding proteins (IGFBPs), which regulate their availability and activity b...
[ "GO:0005520", "GO:0005576" ]
[ "insulin-like growth factor binding", "extracellular region" ]
[ "molecular_function", "cellular_component" ]
2
[ "PRINTS" ]
[ "PR01982" ]
[ "IGFBPFAMILY6" ]
[ 414 ]
1
[ "REACTOME", "REACTOME", "REACTOME" ]
[ "R-HSA-381426", "R-MMU-381426", "R-RNO-381426" ]
[ "REACTOME:R-HSA-381426", "REACTOME:R-MMU-381426", "REACTOME:R-RNO-381426" ]
3
[ "1rmj" ]
1
[ "PUB00053602", "PUB00053603", "PUB00053604", "PUB00053605", "PUB00053606", "PUB00053607", "PUB00053617" ]
[ "8874492", "10605625", "7504671", "7499327", "7544787", "9115291", "10980619" ]
[ "Growth, differentiation, and survival: multiple physiological functions for insulin-like growth factors.", "The insulin-like growth factor-binding protein (IGFBP) superfamily.", "Demonstration of receptors for insulin-like growth factor binding protein-3 on Hs578T human breast cancer cells.", "Heparin modula...
[ 1996, 1999, 1993, 1995, 1995, 1997, 2000 ]
7
[ "IPR022321" ]
[]
1
0
1
[ "Euteleostomi" ]
[ 414 ]
1
[ "Danio rerio", "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]
[ 4, 3, 1, 2 ]
4
true
Family
Insulin-like growth factor-binding protein 6
Insulin-like growth factor-binding protein 6
IGFBP-6
8
IPR022327
22,327
Insulin-like growth factor-binding protein 4
IGFBP-4
Family
747
false
false
Insulin-like growth factors (IGFs)-I and -II are small secreted peptides that stimulate the survival, and promote the proliferation and differentiation, of many cell types [ ]. In biological fluids, these growth factors are usually bound to IGF binding proteins (IGFBPs), which regulate their availability and activity b...
[ "GO:0005520", "GO:0005576" ]
[ "insulin-like growth factor binding", "extracellular region" ]
[ "molecular_function", "cellular_component" ]
2
[ "PRINTS" ]
[ "PR01980" ]
[ "IGFBPFAMILY4" ]
[ 747 ]
1
[ "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME" ]
[ "R-BTA-381426", "R-BTA-8957275", "R-HSA-381426", "R-HSA-8957275", "R-MMU-381426", "R-MMU-8957275", "R-RNO-381426", "R-RNO-8957275" ]
[ "REACTOME:R-BTA-381426", "REACTOME:R-BTA-8957275", "REACTOME:R-HSA-381426", "REACTOME:R-HSA-8957275", "REACTOME:R-MMU-381426", "REACTOME:R-MMU-8957275", "REACTOME:R-RNO-381426", "REACTOME:R-RNO-8957275" ]
8
[]
0
[ "PUB00053602", "PUB00053603", "PUB00053604", "PUB00053605", "PUB00053606", "PUB00053607", "PUB00053618" ]
[ "8874492", "10605625", "7504671", "7499327", "7544787", "9115291", "18528331" ]
[ "Growth, differentiation, and survival: multiple physiological functions for insulin-like growth factors.", "The insulin-like growth factor-binding protein (IGFBP) superfamily.", "Demonstration of receptors for insulin-like growth factor binding protein-3 on Hs578T human breast cancer cells.", "Heparin modula...
[ 1996, 1999, 1993, 1995, 1995, 1997, 2008 ]
7
[ "IPR022321" ]
[]
1
0
1
[ "Gnathostomata" ]
[ 747 ]
1
[ "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]
[ 1, 3, 4 ]
3
true
Family
Insulin-like growth factor-binding protein 4
Insulin-like growth factor-binding protein 4
IGFBP-4
1
IPR022328
22,328
Tumour necrosis factor receptor 7
TNFR_7
Family
247
false
false
The tumour necrosis factor (TNF) receptor (TNFR) superfamily comprises more than 20 type-I transmembrane proteins. Family members are defined based on similarity in their extracellular domain -a region that contains many cysteine residues arranged in a specific repetitive pattern [ ]. The cysteines allow formation of a...
[ "GO:0004888", "GO:0043066", "GO:0045579", "GO:0045582" ]
[ "transmembrane signaling receptor activity", "negative regulation of apoptotic process", "positive regulation of B cell differentiation", "positive regulation of T cell differentiation" ]
[ "molecular_function", "biological_process", "biological_process", "biological_process" ]
4
[ "PRINTS" ]
[ "PR01960" ]
[ "TNFACTORR7" ]
[ 247 ]
1
[ "REACTOME", "REACTOME" ]
[ "R-HSA-5669034", "R-MMU-5669034" ]
[ "REACTOME:R-HSA-5669034", "REACTOME:R-MMU-5669034" ]
2
[]
0
[ "PUB00000892", "PUB00011475", "PUB00046030", "PUB00046031", "PUB00046032", "PUB00046033", "PUB00046034", "PUB00053619" ]
[ "8387891", "9177220", "7917108", "15500863", "11239407", "9826575", "9826574", "11062504" ]
[ "Crystal structure of the soluble human 55 kd TNF receptor-human TNF beta complex: implications for TNF receptor activation.", "CD27, a member of the tumor necrosis factor receptor family, induces apoptosis and binds to Siva, a proapoptotic protein.", "Tumor necrosis factor receptor superfamily members and thei...
[ 1993, 1997, 1994, 2004, 2001, 1998, 1998, 2000 ]
8
[]
[]
0
0
null
[ "Eutheria" ]
[ 247 ]
1
[ "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]
[ 1, 4, 6 ]
3
true
Family
Tumour necrosis factor receptor 7
Tumour necrosis factor receptor 7
TNFR_7
9
IPR022329
22,329
Tumour necrosis factor receptor 25
TNFR_25
Family
969
false
false
The tumour necrosis factor (TNF) receptor (TNFR) superfamily comprises more than 20 type-I transmembrane proteins. Family members are defined based on similarity in their extracellular domain- a region that contains many cysteine residues arranged in a specific repetitive pattern [ ]. The cysteines allow formation of a...
[]
[]
[]
0
[ "PRINTS", "PANTHER" ]
[ "PR01972", "PTHR47220" ]
[ "TNFACTORR25", "" ]
[ 590, 966 ]
2
[ "REACTOME" ]
[ "R-HSA-5669034" ]
[ "REACTOME:R-HSA-5669034" ]
1
[]
0
[ "PUB00000892", "PUB00046030", "PUB00046031", "PUB00046032", "PUB00046033", "PUB00046034", "PUB00053629", "PUB00053630" ]
[ "8387891", "7917108", "15500863", "11239407", "9826575", "9826574", "9615223", "11313471" ]
[ "Crystal structure of the soluble human 55 kd TNF receptor-human TNF beta complex: implications for TNF receptor activation.", "Tumor necrosis factor receptor superfamily members and their ligands.", "Assembly of post-receptor signaling complexes for the tumor necrosis factor receptor superfamily.", "The TNF ...
[ 1993, 1994, 2004, 2001, 1998, 1998, 1998, 2001 ]
8
[]
[]
0
0
null
[ "Eumetazoa" ]
[ 969 ]
1
[ "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]
[ 6, 3, 5 ]
3
true
Family
Tumour necrosis factor receptor 25
Tumour necrosis factor receptor 25
TNFR_25
5
IPR022330
22,330
Tumour necrosis factor receptor 21
TNFR_21
Family
1,039
false
false
The tumour necrosis factor (TNF) receptor (TNFR) superfamily comprises more than 20 type-I transmembrane proteins. Family members are defined based on similarity in their extracellular domain -a region that contains many cysteine residues arranged in a specific repetitive pattern [ ]. The cysteines allow formation of a...
[]
[]
[]
0
[ "PRINTS", "PANTHER" ]
[ "PR01971", "PTHR46921" ]
[ "TNFACTORR21", "" ]
[ 946, 1039 ]
2
[ "REACTOME" ]
[ "R-HSA-1989781" ]
[ "REACTOME:R-HSA-1989781" ]
1
[ "2dbh", "3qo4", "3u3p", "3u3q", "3u3s", "3u3t", "3u3v", "4yn0" ]
8
[ "PUB00000892", "PUB00046030", "PUB00046031", "PUB00046032", "PUB00046033", "PUB00046034", "PUB00053620", "PUB00082372", "PUB00153341" ]
[ "8387891", "7917108", "15500863", "11239407", "9826575", "9826574", "19760075", "21463639", "34012073" ]
[ "Crystal structure of the soluble human 55 kd TNF receptor-human TNF beta complex: implications for TNF receptor activation.", "Tumor necrosis factor receptor superfamily members and their ligands.", "Assembly of post-receptor signaling complexes for the tumor necrosis factor receptor superfamily.", "The TNF ...
[ 1993, 1994, 2004, 2001, 1998, 1998, 2009, 2011, 2021 ]
9
[]
[]
0
0
null
[ "Eukaryota" ]
[ 1039 ]
1
[ "Danio rerio", "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]
[ 2, 3, 3, 1 ]
4
true
Family
Tumour necrosis factor receptor 21
Tumour necrosis factor receptor 21
TNFR_21
2
IPR022332
22,332
Tumour necrosis factor receptor 14
TNFR_14
Family
256
false
false
The tumour necrosis factor (TNF) receptor (TNFR) superfamily comprises more than 20 type-I transmembrane proteins. Family members are defined based on similarity in their extracellular domain -a region that contains many cysteine residues arranged in a specific repetitive pattern [ ]. The cysteines allow formation of a...
[]
[]
[]
0
[ "PRINTS" ]
[ "PR01965" ]
[ "TNFACTORR14" ]
[ 256 ]
1
[ "REACTOME", "REACTOME", "REACTOME", "REACTOME" ]
[ "R-HSA-5669034", "R-HSA-9927353", "R-MMU-5669034", "R-MMU-9927353" ]
[ "REACTOME:R-HSA-5669034", "REACTOME:R-HSA-9927353", "REACTOME:R-MMU-5669034", "REACTOME:R-MMU-9927353" ]
4
[ "1jma", "2aw2", "3wvt", "4fhq", "4rsu", "5t2q", "5t2r", "6ng3", "7msg", "7msj" ]
10
[ "PUB00000892", "PUB00046030", "PUB00046031", "PUB00046032", "PUB00046033", "PUB00046034", "PUB00053628" ]
[ "8387891", "7917108", "15500863", "11239407", "9826575", "9826574", "8898196" ]
[ "Crystal structure of the soluble human 55 kd TNF receptor-human TNF beta complex: implications for TNF receptor activation.", "Tumor necrosis factor receptor superfamily members and their ligands.", "Assembly of post-receptor signaling complexes for the tumor necrosis factor receptor superfamily.", "The TNF ...
[ 1993, 1994, 2004, 2001, 1998, 1998, 1996 ]
7
[]
[]
0
0
null
[ "Euteleostomi" ]
[ 256 ]
1
[ "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]
[ 7, 7, 3 ]
3
true
Family
Tumour necrosis factor receptor 14
Tumour necrosis factor receptor 14
TNFR_14
1
IPR022334
22,334
Insulin-like growth factor II
IGF2
Family
1,206
false
false
The IGFs, or somatomedins, play a key role in pre-adolescent mammalian growth. IGF2 appears to be induced by placental lactogen and is thought to play a role in foetal development [ ]. The insulin/IGF/relaxin superfamily is an ancient family of functionally diverse proteins [ ]. The 3D structures of a number of family ...
[ "GO:0008083", "GO:0005615" ]
[ "growth factor activity", "extracellular space" ]
[ "molecular_function", "cellular_component" ]
2
[ "PRINTS" ]
[ "PR02006" ]
[ "INSLNLIKEGF2" ]
[ 1206 ]
1
[ "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOM...
[ "R-BTA-114608", "R-BTA-2404192", "R-BTA-2428928", "R-BTA-2428933", "R-BTA-381426", "R-GGA-114608", "R-GGA-2404192", "R-GGA-2428928", "R-GGA-2428933", "R-GGA-381426", "R-HSA-114608", "R-HSA-2404192", "R-HSA-2428928", "R-HSA-2428933", "R-HSA-381426", "R-MMU-114608", "R-MMU-2404192", ...
[ "REACTOME:R-BTA-114608", "REACTOME:R-BTA-2404192", "REACTOME:R-BTA-2428928", "REACTOME:R-BTA-2428933", "REACTOME:R-BTA-381426", "REACTOME:R-GGA-114608", "REACTOME:R-GGA-2404192", "REACTOME:R-GGA-2428928", "REACTOME:R-GGA-2428933", "REACTOME:R-GGA-381426", "REACTOME:R-HSA-114608", "REACTOME:R-H...
30
[ "1igl", "2l29", "2v5p", "3e4z", "3kr3", "5l3l", "5l3m", "5l3n", "6um2", "6vwg", "6vwi", "8u4c", "8u4e", "8vjb", "8vjc", "8ysz" ]
16
[ "PUB00003970", "PUB00003972", "PUB00003973", "PUB00023078", "PUB00037375", "PUB00053639", "PUB00053640", "PUB00053641", "PUB00053642", "PUB00053643", "PUB00096674" ]
[ "503234", "6243748", "6107857", "2036417", "9141131", "10601981", "8735594", "8683595", "1319992", "6382022", "30747102" ]
[ "Nucleotide sequence of a cDNA clone encoding human preproinsulin.", "Sequence of the human insulin gene.", "Hormone families: pancreatic hormones and homologous growth factors.", "Solution structure of human insulin-like growth factor 1: a nuclear magnetic resonance and restrained molecular dynamics study.",...
[ 1979, 1980, 1980, 1991, 1997, 1999, 1996, 1996, 1992, 1984, 2019 ]
11
[ "IPR022350" ]
[]
1
0
1
[ "Bilateria" ]
[ 1206 ]
1
[ "Danio rerio", "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]
[ 2, 4, 2, 9 ]
4
true
Family
Insulin-like growth factor II
Insulin-like growth factor II
IGF2
2
IPR022335
22,335
G protein-coupled receptor 153
GPR153
Family
544
false
false
G protein-coupled receptors (GPCRs) constitute a vast protein family that encompasses a wide range of functions, including various autocrine, paracrine and endocrine processes. They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups [ ]. The term clan can...
[ "GO:0004930", "GO:0007186", "GO:0016020" ]
[ "G protein-coupled receptor activity", "G protein-coupled receptor signaling pathway", "membrane" ]
[ "molecular_function", "biological_process", "cellular_component" ]
3
[ "PRINTS" ]
[ "PR01992" ]
[ "GPR153" ]
[ 544 ]
1
[]
[]
[]
0
[]
0
[ "PUB00000131", "PUB00002477", "PUB00004960", "PUB00004961", "PUB00053632", "PUB00053633", "PUB00053634", "PUB00053635", "PUB00063577", "PUB00063578", "PUB00063579", "PUB00063580", "PUB00063816", "PUB00063901", "PUB00063902" ]
[ "2111655", "2830256", "8386361", "8170923", "9445485", "9074930", "8723724", "12679517", "8081729", "15914470", "18948278", "16753280", "23020293", "15777626", "21981325" ]
[ "G proteins in signal transduction.", "G protein involvement in receptor-effector coupling.", "Design of a discriminating fingerprint for G-protein-coupled receptors.", "Fingerprinting G-protein-coupled receptors.", "Comparative sequence analysis of a gene-rich cluster at human chromosome 12p13 and its synt...
[ 1990, 1988, 1993, 1994, 1998, 1997, 1996, 2003, 1994, 2005, 2009, 2006, 2013, 2005, 2011 ]
15
[ "IPR022347" ]
[]
1
0
1
[ "Gnathostomata" ]
[ 544 ]
1
[ "Danio rerio", "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]
[ 4, 2, 2, 3 ]
4
true
Family
G protein-coupled receptor 153
G protein-coupled receptor 153
GPR153
9
IPR022336
22,336
Neurogenic locus notch homolog protein 2
Notch_2
Family
881
false
false
Notch cell surface receptors are large, single-pass type-1 transmembrane proteins found in a diverse range of metazoan species, from human to Caenorhabditis species. The fruit fly, Drosophila melanogaster, possesses only one Notch protein, whereas in C.elegans, two receptors have been found; by contrast, four Notch par...
[ "GO:0038023", "GO:0006355", "GO:0006915", "GO:0007219", "GO:0071228", "GO:0043235" ]
[ "signaling receptor activity", "regulation of DNA-templated transcription", "apoptotic process", "Notch signaling pathway", "cellular response to tumor cell", "receptor complex" ]
[ "molecular_function", "biological_process", "biological_process", "biological_process", "biological_process", "cellular_component" ]
6
[ "PRINTS" ]
[ "PR01985" ]
[ "NOTCH2" ]
[ 881 ]
1
[ "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME" ]
[ "R-HSA-1912399", "R-HSA-1912408", "R-HSA-1912420", "R-HSA-2197563", "R-HSA-2979096", "R-HSA-350054", "R-HSA-5083630", "R-HSA-9013695" ]
[ "REACTOME:R-HSA-1912399", "REACTOME:R-HSA-1912408", "REACTOME:R-HSA-1912420", "REACTOME:R-HSA-2197563", "REACTOME:R-HSA-2979096", "REACTOME:R-HSA-350054", "REACTOME:R-HSA-5083630", "REACTOME:R-HSA-9013695" ]
8
[]
0
[ "PUB00013432", "PUB00053622", "PUB00053623", "PUB00053624", "PUB00053625", "PUB00053626", "PUB00053638", "PUB00076422", "PUB00100055", "PUB00100056", "PUB00100057", "PUB00100058", "PUB00100059" ]
[ "10221902", "19379690", "12354787", "11101851", "12668592", "16429119", "10206645", "25985737", "18710934", "29149593", "10393120", "21378989", "21378985" ]
[ "Notch signaling: cell fate control and signal integration in development.", "The canonical Notch signaling pathway: unfolding the activation mechanism.", "The disintegrin/metalloprotease ADAM 10 is essential for Notch signalling but not for alpha-secretase activity in fibroblasts.", "MAML1, a human homologue...
[ 1999, 2009, 2002, 2000, 2003, 2006, 1999, 2015, 2008, 2017, 1999, 2011, 2011 ]
13
[ "IPR008297" ]
[]
1
0
1
[ "Euteleostomi" ]
[ 881 ]
1
[ "Danio rerio", "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]
[ 1, 3, 3, 5 ]
4
true
Family
Neurogenic locus notch homolog protein 2
Neurogenic locus notch homolog protein 2
Notch_2
1
IPR022337
22,337
Inositol monophosphatase SuhB-like
Inositol_monophosphatase_SuhB
Family
12,253
false
false
This entry represents a group of inositol monophosphatases (IMPases) mainly from bacteria. E. coli SuhB is part of the rRNA transcription anti-termination complex (rrnTAC) that prevents rho-dependent termination. The rrnTAC consists of Nus factors A, B, E and G, ribosomal protein S4 and inositol mono-phosphatase SuhB. ...
[ "GO:0008934" ]
[ "inositol monophosphate 1-phosphatase activity" ]
[ "molecular_function" ]
1
[ "PRINTS" ]
[ "PR01959" ]
[ "SBIMPHPHTASE" ]
[ 12253 ]
1
[ "EC", "METACYC", "METACYC", "METACYC" ]
[ "3.1.3.25", "PWY-2301", "PWY-4702", "PWY-6363" ]
[ "EC:3.1.3.25", "METACYC:PWY-2301", "METACYC:PWY-4702", "METACYC:PWY-6363" ]
4
[ "2pcr", "2qfl", "3luz", "3lv0", "5zhh", "6ib7", "6ib8", "6tqn", "6tqo", "8wdq", "8wip", "9j90", "9jfc", "9mmi" ]
14
[ "PUB00000822", "PUB00004864", "PUB00026064", "PUB00032773", "PUB00046132", "PUB00053644", "PUB00053645", "PUB00095608", "PUB00095610" ]
[ "2553271", "7761465", "8068621", "15858264", "10822345", "10747806", "8002619", "17652087", "31020314" ]
[ "Neural and developmental actions of lithium: a unifying hypothesis.", "Definition of a metal-dependent/Li(+)-inhibited phosphomonoesterase protein family based upon a conserved three-dimensional core structure.", "Structural studies of metal binding by inositol monophosphatase: evidence for two-metal ion catal...
[ 1989, 1995, 1994, 2005, 2000, 2000, 1995, 2007, 2019 ]
9
[ "IPR033942" ]
[]
1
0
1
[ "Bacteria", "Candidatus Iainarchaeum sp.", "Eukaryota", "unclassified sequences" ]
[ 11997, 5, 72, 179 ]
4
[ "Escherichia coli (strain K12)" ]
[ 1 ]
1
true
Family
Inositol monophosphatase SuhB-like
Inositol monophosphatase SuhB-like
Inositol_monophosphatase_SuhB
6
IPR022338
22,338
Tumour necrosis factor receptor 13C
TNFR_13C
Family
344
false
false
The tumour necrosis factor (TNF) receptor (TNFR) superfamily comprises more than 20 type-I transmembrane proteins. Family members are defined based on similarity in their extracellular domain -a region that contains many cysteine residues arranged in a specific repetitive pattern [ ]. The cysteines allow formation of a...
[ "GO:0038023", "GO:0033209" ]
[ "signaling receptor activity", "tumor necrosis factor-mediated signaling pathway" ]
[ "molecular_function", "biological_process" ]
2
[ "PRINTS" ]
[ "PR01964" ]
[ "TNFACTORR13C" ]
[ 344 ]
1
[ "REACTOME", "REACTOME", "REACTOME", "REACTOME" ]
[ "R-HSA-5668541", "R-HSA-5676594", "R-MMU-5668541", "R-MMU-5676594" ]
[ "REACTOME:R-HSA-5668541", "REACTOME:R-HSA-5676594", "REACTOME:R-MMU-5668541", "REACTOME:R-MMU-5676594" ]
4
[ "8zuk" ]
1
[ "PUB00000892", "PUB00046030", "PUB00046031", "PUB00046032", "PUB00046033", "PUB00046034", "PUB00053646", "PUB00053647" ]
[ "8387891", "7917108", "15500863", "11239407", "9826575", "9826574", "11509692", "17073941" ]
[ "Crystal structure of the soluble human 55 kd TNF receptor-human TNF beta complex: implications for TNF receptor activation.", "Tumor necrosis factor receptor superfamily members and their ligands.", "Assembly of post-receptor signaling complexes for the tumor necrosis factor receptor superfamily.", "The TNF ...
[ 1993, 1994, 2004, 2001, 1998, 1998, 2001, 2007 ]
8
[ "IPR043521" ]
[]
1
0
1
[ "Gnathostomata" ]
[ 344 ]
1
[ "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]
[ 4, 5, 1 ]
3
true
Family
Tumour necrosis factor receptor 13C
Tumour necrosis factor receptor 13C
TNFR_13C
3
IPR022339
22,339
MHC class II-associated invariant chain
MHC_II-assoc_invar_chain
Family
1,121
false
false
The CD74 antigen (also known as H-2 class II histocompatibility antigen gamma chain, MHC class II-associated invariant chain, Ia antigen-associated invariant chain, or Ii) plays a key role in MHC class II antigen processing: it stabilises peptide-free class II alpha/beta heterodimers in a nonameric (α-β-gamma)3 complex...
[ "GO:0042289", "GO:0019882", "GO:0016020" ]
[ "MHC class II protein binding", "antigen processing and presentation", "membrane" ]
[ "molecular_function", "biological_process", "cellular_component" ]
3
[ "PRINTS" ]
[ "PR01990" ]
[ "CD74ANTIGEN" ]
[ 1121 ]
1
[ "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME" ]
[ "R-HSA-202733", "R-HSA-2132295", "R-HSA-9925563", "R-MMU-202733", "R-MMU-2132295", "R-RNO-202733", "R-RNO-2132295" ]
[ "REACTOME:R-HSA-202733", "REACTOME:R-HSA-2132295", "REACTOME:R-HSA-9925563", "REACTOME:R-MMU-202733", "REACTOME:R-MMU-2132295", "REACTOME:R-RNO-202733", "REACTOME:R-RNO-2132295" ]
7
[ "1iie", "8vrw", "8vsp" ]
3
[ "PUB00011780" ]
[ "9843486" ]
[ "Structure of a trimeric domain of the MHC class II-associated chaperonin and targeting protein Ii." ]
[ 1998 ]
1
[]
[]
0
0
null
[ "Bilateria", "Pseudomonadati" ]
[ 1119, 2 ]
2
[ "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]
[ 7, 3, 9 ]
3
true
Family
MHC class II-associated invariant chain
MHC class II-associated invariant chain
MHC_II-assoc_invar_chain
2
IPR022340
22,340
G protein-coupled receptor GCR1 putative
GPCR_GCR1_put
Family
1,103
false
false
Heterotrimeric G protein-mediated signalling via activated 7-transmembrane (7TM) serpentine receptors is well known in a range of organisms, but evidence for the existence of this pathway in plants has been elusive. Over the years, however, evidence that G proteins are involved in signal transduction in plants has been...
[]
[]
[]
0
[ "PRINTS" ]
[ "PR02000" ]
[ "GCR1PLANT" ]
[ 1103 ]
1
[]
[]
[]
0
[]
0
[ "PUB00053651", "PUB00053652" ]
[ "9370348", "9512416" ]
[ "Cloning of a putative G-protein-coupled receptor from Arabidopsis thaliana.", "A higher plant seven-transmembrane receptor that influences sensitivity to cytokinins." ]
[ 1997, 1998 ]
2
[ "IPR022343" ]
[]
1
0
1
[ "Eukaryota" ]
[ 1103 ]
1
[ "Arabidopsis thaliana", "Oryza sativa subsp. japonica", "Zea mays" ]
[ 5, 2, 9 ]
3
true
Family
G protein-coupled receptor GCR1 putative
G protein-coupled receptor GCR1 putative
GPCR_GCR1_put
8
IPR022341
22,341
Insulin-like growth factor I
IGF-I
Family
1,724
false
false
The IGFs, or somatomedins, play a key role in pre-adolescent mammalian growth. IGFI expression is regulated by growth hormone and mediates post-natal growth [ ]. Defects in IGF1 are the cause of insulin-like growth factor I deficiency (IGF1 deficiency), an autosomal recessive disorder characterised by growth retardatio...
[ "GO:0008083", "GO:0005615" ]
[ "growth factor activity", "extracellular space" ]
[ "molecular_function", "cellular_component" ]
2
[ "PRINTS" ]
[ "PR02005" ]
[ "INSLNLIKEGF1" ]
[ 1724 ]
1
[ "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOM...
[ "R-BTA-114608", "R-BTA-2404192", "R-BTA-2428928", "R-BTA-2428933", "R-BTA-381426", "R-BTA-422085", "R-CFA-114608", "R-CFA-2404192", "R-CFA-2428928", "R-CFA-2428933", "R-CFA-381426", "R-CFA-422085", "R-GGA-114608", "R-GGA-2404192", "R-GGA-2428928", "R-GGA-2428933", "R-GGA-381426", "...
[ "REACTOME:R-BTA-114608", "REACTOME:R-BTA-2404192", "REACTOME:R-BTA-2428928", "REACTOME:R-BTA-2428933", "REACTOME:R-BTA-381426", "REACTOME:R-BTA-422085", "REACTOME:R-CFA-114608", "REACTOME:R-CFA-2404192", "REACTOME:R-CFA-2428928", "REACTOME:R-CFA-2428933", "REACTOME:R-CFA-381426", "REACTOME:R-C...
42
[ "1bqt", "1gzr", "1gzy", "1gzz", "1h02", "1h59", "1imx", "1pmx", "1wqj", "2dsp", "2dsq", "2dsr", "2gf1", "3gf1", "3lri", "4xss", "5u8q", "6ff3", "6pyh", "6rva", "7s0q", "7wrq", "7yrr", "8eyr", "8x06", "8x2m", "8xjs", "8xk1", "8xkm", "8xkr" ]
30
[ "PUB00003970", "PUB00003972", "PUB00003973", "PUB00023078", "PUB00037375", "PUB00053639", "PUB00053640", "PUB00053641", "PUB00053642", "PUB00053643", "PUB00053653", "PUB00096674" ]
[ "503234", "6243748", "6107857", "2036417", "9141131", "10601981", "8735594", "8683595", "1319992", "6382022", "8857020", "30747102" ]
[ "Nucleotide sequence of a cDNA clone encoding human preproinsulin.", "Sequence of the human insulin gene.", "Hormone families: pancreatic hormones and homologous growth factors.", "Solution structure of human insulin-like growth factor 1: a nuclear magnetic resonance and restrained molecular dynamics study.",...
[ 1979, 1980, 1980, 1991, 1997, 1999, 1996, 1996, 1992, 1984, 1996, 2019 ]
12
[ "IPR022350" ]
[]
1
0
1
[ "Gnathostomata" ]
[ 1724 ]
1
[ "Danio rerio", "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]
[ 2, 6, 8, 14 ]
4
true
Family
Insulin-like growth factor I
Insulin-like growth factor I
IGF-I
7
IPR022342
22,342
Tumour necrosis factor receptor 19
TNFR_19
Family
925
false
false
TNF receptor 19, also known as toxicity and JNK inducer (TAJ) and TROY, is highly expressed during embryonic development, where it may act as a regulator of cell activation and cell death [ ]. In adult tissues, the receptor is expressed in the central nervous system, and may mediate the inhibitory effects of myelin upo...
[]
[]
[]
0
[ "PRINTS" ]
[ "PR01969" ]
[ "TNFACTORR19" ]
[ 925 ]
1
[]
[]
[]
0
[]
0
[ "PUB00000892", "PUB00046030", "PUB00046031", "PUB00046032", "PUB00046033", "PUB00046034", "PUB00053654", "PUB00053655" ]
[ "8387891", "7917108", "15500863", "11239407", "9826575", "9826574", "10809768", "15694321" ]
[ "Crystal structure of the soluble human 55 kd TNF receptor-human TNF beta complex: implications for TNF receptor activation.", "Tumor necrosis factor receptor superfamily members and their ligands.", "Assembly of post-receptor signaling complexes for the tumor necrosis factor receptor superfamily.", "The TNF ...
[ 1993, 1994, 2004, 2001, 1998, 1998, 2000, 2005 ]
8
[ "IPR047526" ]
[]
1
0
1
[ "Gnathostomata" ]
[ 925 ]
1
[ "Danio rerio", "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]
[ 6, 1, 3, 2 ]
4
true
Family
Tumour necrosis factor receptor 19
Tumour necrosis factor receptor 19
TNFR_19
8
IPR022343
22,343
GCR1-cAMP receptor
GCR1-cAMP_receptor
Family
3,738
false
false
Heterotrimeric G protein-mediated signalling via activated 7-transmembrane (7TM) serpentine receptors is well known in a range of organisms, but evidence for the existence of this pathway in plants has been elusive. Over the years, however, evidence that G proteins are involved in signal transduction in plants has been...
[]
[]
[]
0
[ "PRINTS" ]
[ "PR02001" ]
[ "GCR1CAMPR" ]
[ 3738 ]
1
[]
[]
[]
0
[]
0
[ "PUB00001912", "PUB00001913", "PUB00005114", "PUB00053651", "PUB00053652" ]
[ "8436297", "8382181", "3047871", "9370348", "9512416" ]
[ "CAR2, a prestalk cAMP receptor required for normal tip formation and late development of Dictyostelium discoideum.", "Identification and targeted gene disruption of cAR3, a cAMP receptor subtype expressed during multicellular stages of Dictyostelium development.", "A chemoattractant receptor controls developme...
[ 1993, 1993, 1988, 1997, 1998 ]
5
[]
[ "IPR022340" ]
0
1
0
[ "Eukaryota" ]
[ 3738 ]
1
[ "Arabidopsis thaliana", "Danio rerio", "Drosophila melanogaster", "Homo sapiens", "Mus musculus", "Oryza sativa subsp. japonica", "Rattus norvegicus", "Zea mays" ]
[ 5, 7, 2, 7, 4, 2, 2, 9 ]
8
true
Family
GCR1-cAMP receptor
GCR1-cAMP receptor
GCR1-cAMP_receptor
6
IPR022344
22,344
Gene transfer agent, major tail protein
GTA_major-tail
Family
1,743
false
false
Gene transfer agents belong to a group of unusual genetic exchange elements [ ]. GTAs are unusual in the sense they have the structure of a small tailed phage, which do not possess typical phage traits such as host cell lysis and infectious transmission of the GTA genes. In the Rhodobacter capsulatus GTA the GTA partic...
[]
[]
[]
0
[ "PRINTS" ]
[ "PR01996" ]
[ "MTP1FAMILY" ]
[ 1743 ]
1
[]
[]
[]
0
[ "6tba", "6te9", "6tea", "6teb", "6toa", "6tsv", "6tui" ]
7
[ "PUB00055430", "PUB00055431" ]
[ "11382219", "12399927" ]
[ "The gene transfer agent of Rhodobacter capsulatus and \"constitutive transduction\" in prokaryotes.", "Evolutionary implications of phylogenetic analyses of the gene transfer agent (GTA) of Rhodobacter capsulatus." ]
[ 2001, 2002 ]
2
[ "IPR011855" ]
[]
1
0
1
[ "Bacteria", "Ecdysozoa", "Viruses", "metagenomes" ]
[ 1713, 2, 11, 17 ]
4
[]
[]
0
true
Family
Gene transfer agent, major tail protein
Gene transfer agent, major tail protein
GTA_major-tail
2
IPR022345
22,345
Bacteriophage 69, Orf23, major tail protein
Phage_69_Orf23_MTP
Family
572
false
false
This entry is represented by Bacteriophage 69, Orf23, the major tail protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
[]
[]
[]
0
[ "PRINTS" ]
[ "PR01997" ]
[ "MTP2FAMILY" ]
[ 572 ]
1
[]
[]
[]
0
[ "6v8i", "9mu2", "9mu3" ]
3
[]
[]
[]
[]
0
[ "IPR011855" ]
[ "IPR022363" ]
1
1
0
[ "Bacteria", "Viruses", "metagenomes" ]
[ 446, 124, 2 ]
3
[]
[]
0
true
Family
Bacteriophage 69, Orf23, major tail protein
Bacteriophage 69, Orf23, major tail protein
Phage_69_Orf23_MTP
4
IPR022346
22,346
General secretion pathway, GspH
T2SS_GspH
Domain
12,663
false
false
GspH is involved in bacterial type II export systems [ ]. Like all pilins, GspH has an N terminus α helix [ ]. This helix is followed by nine β strands forming two β sheets, one of five antiparallel strands and one of four antiparallel strands [ ]. GspH is a minor pseudopilin; it is expressed much less than other pseud...
[ "GO:0015628", "GO:0015627" ]
[ "protein secretion by the type II secretion system", "type II protein secretion system complex" ]
[ "biological_process", "cellular_component" ]
2
[ "PFAM" ]
[ "PF12019" ]
[ "GspH" ]
[ 12663 ]
1
[]
[]
[]
0
[ "2knq", "2qv8", "4dq9", "4ipu", "4ipv", "7qyi" ]
6
[ "PUB00049160" ]
[ "18241884" ]
[ "Structure of the minor pseudopilin EpsH from the Type 2 secretion system of Vibrio cholerae." ]
[ 2008 ]
1
[]
[]
0
0
null
[ "Bacteria", "Eukaryota", "unclassified sequences" ]
[ 12469, 11, 183 ]
3
[ "Escherichia coli (strain K12)" ]
[ 1 ]
1
true
Domain
General secretion pathway, GspH
General secretion pathway, GspH
T2SS_GspH
7
IPR022347
22,347
G protein-coupled receptor 153/162
GCR_153/162
Family
1,325
false
false
G protein-coupled receptors (GPCRs) constitute a vast protein family that encompasses a wide range of functions, including various autocrine, paracrine and endocrine processes. They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups [ ]. The term clan can...
[ "GO:0004930", "GO:0007186", "GO:0016020" ]
[ "G protein-coupled receptor activity", "G protein-coupled receptor signaling pathway", "membrane" ]
[ "molecular_function", "biological_process", "cellular_component" ]
3
[ "PRINTS", "PANTHER" ]
[ "PR01991", "PTHR16518" ]
[ "GPR153GPR162", "" ]
[ 1217, 1315 ]
2
[]
[]
[]
0
[]
0
[ "PUB00000131", "PUB00002477", "PUB00004960", "PUB00004961", "PUB00053632", "PUB00053633", "PUB00053634", "PUB00053635", "PUB00063577", "PUB00063578", "PUB00063579", "PUB00063580", "PUB00063816", "PUB00063901", "PUB00063902" ]
[ "2111655", "2830256", "8386361", "8170923", "9445485", "9074930", "8723724", "12679517", "8081729", "15914470", "18948278", "16753280", "23020293", "15777626", "21981325" ]
[ "G proteins in signal transduction.", "G protein involvement in receptor-effector coupling.", "Design of a discriminating fingerprint for G-protein-coupled receptors.", "Fingerprinting G-protein-coupled receptors.", "Comparative sequence analysis of a gene-rich cluster at human chromosome 12p13 and its synt...
[ 1990, 1988, 1993, 1994, 1998, 1997, 1996, 2003, 1994, 2005, 2009, 2006, 2013, 2005, 2011 ]
15
[ "IPR000276" ]
[ "IPR022335", "IPR022348" ]
1
2
0
[ "Bacteria", "Bilateria" ]
[ 9, 1316 ]
2
[ "Danio rerio", "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]
[ 6, 9, 4, 6 ]
4
true
Family
G protein-coupled receptor 153/162
G protein-coupled receptor 153/162
GCR_153/162
1
IPR022348
22,348
G protein-coupled receptor 162
GPR162
Family
659
false
false
G protein-coupled receptors (GPCRs) constitute a vast protein family that encompasses a wide range of functions, including various autocrine, paracrine and endocrine processes. They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups [ ]. The term clan can...
[ "GO:0004930", "GO:0007186", "GO:0016020" ]
[ "G protein-coupled receptor activity", "G protein-coupled receptor signaling pathway", "membrane" ]
[ "molecular_function", "biological_process", "cellular_component" ]
3
[ "PRINTS" ]
[ "PR01993" ]
[ "GPR162" ]
[ 659 ]
1
[]
[]
[]
0
[]
0
[ "PUB00000131", "PUB00002477", "PUB00004960", "PUB00004961", "PUB00053632", "PUB00053633", "PUB00053634", "PUB00053635", "PUB00063577", "PUB00063578", "PUB00063579", "PUB00063580", "PUB00063816", "PUB00063901", "PUB00063902" ]
[ "2111655", "2830256", "8386361", "8170923", "9445485", "9074930", "8723724", "12679517", "8081729", "15914470", "18948278", "16753280", "23020293", "15777626", "21981325" ]
[ "G proteins in signal transduction.", "G protein involvement in receptor-effector coupling.", "Design of a discriminating fingerprint for G-protein-coupled receptors.", "Fingerprinting G-protein-coupled receptors.", "Comparative sequence analysis of a gene-rich cluster at human chromosome 12p13 and its synt...
[ 1990, 1988, 1993, 1994, 1998, 1997, 1996, 2003, 1994, 2005, 2009, 2006, 2013, 2005, 2011 ]
15
[ "IPR022347" ]
[]
1
0
1
[ "Actinomycetes", "Eukaryota", "uncultured Caudovirales phage" ]
[ 2, 656, 1 ]
3
[ "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]
[ 7, 2, 3 ]
3
true
Family
G protein-coupled receptor 162
G protein-coupled receptor 162
GPR162
8
IPR022350
22,350
Insulin-like growth factor IGF-1/2
IGF-1/2
Family
2,889
false
false
This entry represents insulin-like growth factors, IGF-1/2, found in animals. IGF-1 and IGF-2 are peptide hormones structurally similar to insulin and play essential roles in growth and development. Both IGFs bind to IGF receptors, primarily IGF-1R, activating intracellular signaling pathways that regulate cell surviva...
[ "GO:0005179", "GO:0008083", "GO:0005615" ]
[ "hormone activity", "growth factor activity", "extracellular space" ]
[ "molecular_function", "molecular_function", "cellular_component" ]
3
[ "PRINTS" ]
[ "PR02002" ]
[ "INSLNLIKEGF" ]
[ 2889 ]
1
[ "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOM...
[ "R-BTA-114608", "R-BTA-2404192", "R-BTA-2428928", "R-BTA-2428933", "R-BTA-381426", "R-BTA-422085", "R-CFA-114608", "R-CFA-2404192", "R-CFA-2428928", "R-CFA-2428933", "R-CFA-381426", "R-CFA-422085", "R-GGA-114608", "R-GGA-2404192", "R-GGA-2428928", "R-GGA-2428933", "R-GGA-381426", "...
[ "REACTOME:R-BTA-114608", "REACTOME:R-BTA-2404192", "REACTOME:R-BTA-2428928", "REACTOME:R-BTA-2428933", "REACTOME:R-BTA-381426", "REACTOME:R-BTA-422085", "REACTOME:R-CFA-114608", "REACTOME:R-CFA-2404192", "REACTOME:R-CFA-2428928", "REACTOME:R-CFA-2428933", "REACTOME:R-CFA-381426", "REACTOME:R-C...
42
[ "1bqt", "1gzr", "1gzy", "1gzz", "1h02", "1h59", "1igl", "1imx", "1pmx", "1wqj", "2dsp", "2dsq", "2dsr", "2gf1", "2l29", "2v5p", "3e4z", "3gf1", "3kr3", "3lri", "4xss", "5l3l", "5l3m", "5l3n", "5u8q", "6ff3", "6pyh", "6rva", "6um2", "6vwg", "6vwi", "7s0q"...
46
[ "PUB00003970", "PUB00003972", "PUB00003973", "PUB00023078", "PUB00037375", "PUB00053639", "PUB00053640", "PUB00053641", "PUB00053642", "PUB00053643", "PUB00053653", "PUB00096674", "PUB00160367", "PUB00160368" ]
[ "503234", "6243748", "6107857", "2036417", "9141131", "10601981", "8735594", "8683595", "1319992", "6382022", "8857020", "30747102", "1713219", "23382729" ]
[ "Nucleotide sequence of a cDNA clone encoding human preproinsulin.", "Sequence of the human insulin gene.", "Hormone families: pancreatic hormones and homologous growth factors.", "Solution structure of human insulin-like growth factor 1: a nuclear magnetic resonance and restrained molecular dynamics study.",...
[ 1979, 1980, 1980, 1991, 1997, 1999, 1996, 1996, 1992, 1984, 1996, 2019, 1991, 2013 ]
14
[ "IPR022352" ]
[ "IPR022334", "IPR022341" ]
1
2
0
[ "Bilateria" ]
[ 2889 ]
1
[ "Danio rerio", "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]
[ 6, 10, 11, 22 ]
4
true
Family
Insulin-like growth factor IGF-1/2
Insulin-like growth factor IGF-1/2
IGF-1/2
4
IPR022352
22,352
Insulin/IGF/relaxin
Ins/IGF/rlx
Family
6,912
false
false
The insulin/IGF/relaxin superfamily is an ancient family of functionally diverse proteins [ ]. The 3D structures of a number of family members have been determined [ , , ]. The fold comprises two polypeptide chains (A and B) linked by two disulphide bonds: all share a conserved arrangement of four cysteines in their A ...
[ "GO:0005179" ]
[ "hormone activity" ]
[ "molecular_function" ]
1
[ "PRINTS" ]
[ "PR00276" ]
[ "INSULINFAMLY" ]
[ 6912 ]
1
[ "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOM...
[ "R-BTA-114608", "R-BTA-2404192", "R-BTA-2428928", "R-BTA-2428933", "R-BTA-381426", "R-BTA-422085", "R-CFA-114608", "R-CFA-2404192", "R-CFA-2428928", "R-CFA-2428933", "R-CFA-264876", "R-CFA-381426", "R-CFA-422085", "R-CFA-6807878", "R-CFA-6811558", "R-CFA-74713", "R-CFA-74749", "R-C...
[ "REACTOME:R-BTA-114608", "REACTOME:R-BTA-2404192", "REACTOME:R-BTA-2428928", "REACTOME:R-BTA-2428933", "REACTOME:R-BTA-381426", "REACTOME:R-BTA-422085", "REACTOME:R-CFA-114608", "REACTOME:R-CFA-2404192", "REACTOME:R-CFA-2428928", "REACTOME:R-CFA-2428933", "REACTOME:R-CFA-264876", "REACTOME:R-C...
113
[ "1b9g", "1bqt", "1efe", "1gzr", "1gzy", "1gzz", "1h02", "1h59", "1igl", "1imx", "1pmx", "1sju", "1tgr", "1wqj", "1zei", "2dsp", "2dsq", "2dsr", "2gf1", "2jzq", "2kqp", "2l29", "2lwz", "2v5p", "3e4z", "3gf1", "3kr3", "3lri", "4xss", "5l3l", "5l3m", "5l3n"...
87
[ "PUB00003970", "PUB00003972", "PUB00003973", "PUB00023078", "PUB00037375", "PUB00053639", "PUB00053640", "PUB00053641", "PUB00053642", "PUB00096674" ]
[ "503234", "6243748", "6107857", "2036417", "9141131", "10601981", "8735594", "8683595", "1319992", "30747102" ]
[ "Nucleotide sequence of a cDNA clone encoding human preproinsulin.", "Sequence of the human insulin gene.", "Hormone families: pancreatic hormones and homologous growth factors.", "Solution structure of human insulin-like growth factor 1: a nuclear magnetic resonance and restrained molecular dynamics study.",...
[ 1979, 1980, 1980, 1991, 1997, 1999, 1996, 1996, 1992, 2019 ]
10
[]
[ "IPR004825", "IPR017097", "IPR022350" ]
0
3
0
[ "Alphairidovirinae", "Brevibacillus brevis", "Eukaryota" ]
[ 2, 1, 6909 ]
3
[ "Caenorhabditis elegans", "Danio rerio", "Drosophila melanogaster", "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]
[ 1, 17, 16, 18, 19, 33 ]
6
true
Family
Insulin/IGF/relaxin
Insulin/IGF/relaxin
Ins/IGF/rlx
4
IPR022353
22,353
Insulin, conserved site
Insulin_CS
Conserved_site
8,903
false
false
This entry describes the insulin and insulin related family signature pattern The pattern is represented by the following sequence: C-C-{P}-{P}-x-C-[STDNEKPI]-x(3)-[LIVMFS]-x(3)-C. Insulin is found in many animals, and is involved in the regulation of normal glucose homeostasis. It also has other specific physiological...
[]
[]
[]
0
[ "PROSITE" ]
[ "PS00262" ]
[ "INSULIN" ]
[ 8903 ]
1
[ "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOM...
[ "R-BTA-114608", "R-BTA-2404192", "R-BTA-2428928", "R-BTA-2428933", "R-BTA-381426", "R-BTA-418555", "R-BTA-422085", "R-BTA-444821", "R-CFA-114608", "R-CFA-2404192", "R-CFA-2428928", "R-CFA-2428933", "R-CFA-264876", "R-CFA-381426", "R-CFA-422085", "R-CFA-444821", "R-CFA-6807878", "R-...
[ "REACTOME:R-BTA-114608", "REACTOME:R-BTA-2404192", "REACTOME:R-BTA-2428928", "REACTOME:R-BTA-2428933", "REACTOME:R-BTA-381426", "REACTOME:R-BTA-418555", "REACTOME:R-BTA-422085", "REACTOME:R-BTA-444821", "REACTOME:R-CFA-114608", "REACTOME:R-CFA-2404192", "REACTOME:R-CFA-2428928", "REACTOME:R-CF...
116
[ "1a7f", "1ai0", "1aiy", "1aph", "1b17", "1b18", "1b19", "1b2a", "1b2b", "1b2c", "1b2d", "1b2e", "1b2f", "1b2g", "1b9e", "1b9g", "1ben", "1bom", "1bon", "1bph", "1bqt", "1bzv", "1cph", "1dei", "1dph", "1efe", "1ev3", "1ev6", "1evr", "1fu2", "1fub", "1g7a"...
511
[ "PUB00003970", "PUB00003972", "PUB00003973", "PUB00023078", "PUB00037375", "PUB00053639", "PUB00053640", "PUB00053641", "PUB00053642", "PUB00096674" ]
[ "503234", "6243748", "6107857", "2036417", "9141131", "10601981", "8735594", "8683595", "1319992", "30747102" ]
[ "Nucleotide sequence of a cDNA clone encoding human preproinsulin.", "Sequence of the human insulin gene.", "Hormone families: pancreatic hormones and homologous growth factors.", "Solution structure of human insulin-like growth factor 1: a nuclear magnetic resonance and restrained molecular dynamics study.",...
[ 1979, 1980, 1980, 1991, 1997, 1999, 1996, 1996, 1992, 2019 ]
10
[]
[]
0
0
null
[ "Brevibacillus brevis", "Eukaryota", "Singapore grouper iridovirus", "viral metagenome" ]
[ 1, 8899, 2, 1 ]
4
[ "Caenorhabditis elegans", "Danio rerio", "Drosophila melanogaster", "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]
[ 15, 18, 16, 21, 23, 39 ]
6
true
Conserved_site
Insulin, conserved site
Insulin, conserved site
Insulin_CS
8
IPR022354
22,354
Pheromone-binding protein Gp-9
Pheromone-bd_protein_Gp-9
Family
96
false
false
The fire ant, Solenopsis invicta, exists in either monogyne or polygyne social forms: the former contains a single reproductive queen, the latter multiple queens. These social behavioural differences are associated with variation at gene Gp-9, colonies bearing only the B allelic variant being monogyne, those bearing bo...
[ "GO:0035176", "GO:0005615" ]
[ "social behavior", "extracellular space" ]
[ "biological_process", "cellular_component" ]
2
[ "PRINTS" ]
[ "PR02007" ]
[ "ODORANTBPGP9" ]
[ 96 ]
1
[]
[]
[]
0
[]
0
[ "PUB00053657", "PUB00053658", "PUB00053659", "PUB00053660" ]
[ "15987877", "15612031", "11711637", "17987107" ]
[ "Molecular evolutionary analyses of the odorant-binding protein gene Gp-9 in fire ants and other Solenopsis species.", "To b or not to b: a pheromone-binding protein regulates colony social organization in fire ants.", "Identification of a major gene regulating complex social behavior.", "Molecular variation ...
[ 2005, 2005, 2002, 2007 ]
4
[ "IPR006170" ]
[]
1
0
1
[ "Formicidae" ]
[ 96 ]
1
[]
[]
0
true
Family
Pheromone-binding protein Gp-9
Pheromone-binding protein Gp-9
Pheromone-bd_protein_Gp-9
7
IPR022355
22,355
Neurogenic locus Notch 4
Notch_4
Family
335
false
false
Notch cell surface receptors are large, single-pass type-1 transmembrane proteins found in a diverse range of metazoan species, from human to Caenorhabditis species. The fruit fly, Drosophila melanogaster, possesses only one Notch protein, whereas in C.elegans, two receptors have been found; by contrast, four Notch par...
[ "GO:0038023", "GO:0006355", "GO:0007219" ]
[ "signaling receptor activity", "regulation of DNA-templated transcription", "Notch signaling pathway" ]
[ "molecular_function", "biological_process", "biological_process" ]
3
[ "PRINTS" ]
[ "PR01987" ]
[ "NOTCH4" ]
[ 335 ]
1
[ "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME" ]
[ "R-HSA-1912399", "R-HSA-1912408", "R-HSA-1912420", "R-HSA-350054", "R-HSA-5083630", "R-HSA-9013695", "R-HSA-9013700", "R-HSA-9604323", "R-MMU-1912420", "R-MMU-350054", "R-MMU-9013700", "R-MMU-9604323" ]
[ "REACTOME:R-HSA-1912399", "REACTOME:R-HSA-1912408", "REACTOME:R-HSA-1912420", "REACTOME:R-HSA-350054", "REACTOME:R-HSA-5083630", "REACTOME:R-HSA-9013695", "REACTOME:R-HSA-9013700", "REACTOME:R-HSA-9604323", "REACTOME:R-MMU-1912420", "REACTOME:R-MMU-350054", "REACTOME:R-MMU-9013700", "REACTOME:...
12
[]
0
[ "PUB00013432", "PUB00053622", "PUB00053623", "PUB00053624", "PUB00053625", "PUB00053626", "PUB00053638", "PUB00053661" ]
[ "10221902", "19379690", "12354787", "11101851", "12668592", "16429119", "10206645", "9189758" ]
[ "Notch signaling: cell fate control and signal integration in development.", "The canonical Notch signaling pathway: unfolding the activation mechanism.", "The disintegrin/metalloprotease ADAM 10 is essential for Notch signalling but not for alpha-secretase activity in fibroblasts.", "MAML1, a human homologue...
[ 1999, 2009, 2002, 2000, 2003, 2006, 1999, 1997 ]
8
[ "IPR008297" ]
[]
1
0
1
[ "Euteleostomi" ]
[ 335 ]
1
[ "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]
[ 23, 2, 8 ]
3
true
Family
Neurogenic locus Notch 4
Neurogenic locus Notch 4
Notch_4
3
IPR022357
22,357
Major intrinsic protein, conserved site
MIP_CS
Conserved_site
60,790
false
false
This entry represents a conserved region which is located in the cytoplasmic loop between the second and third transmembrane regions of MIP family members. The major intrinsic protein (MIP) family is large and diverse, possessing over 100 members that form transmembrane channels. These channel proteins function in wate...
[]
[]
[]
0
[ "PROSITE" ]
[ "PS00221" ]
[ "MIP" ]
[ 60790 ]
1
[ "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOM...
[ "R-BTA-1237044", "R-BTA-1247673", "R-BTA-432040", "R-BTA-432047", "R-CFA-1237044", "R-CFA-1247673", "R-CFA-432040", "R-CFA-432047", "R-DDI-1237044", "R-DDI-1247673", "R-DDI-432040", "R-DDI-432047", "R-DME-1237044", "R-DME-1247673", "R-DME-432040", "R-DME-432047", "R-GGA-432047", "R...
[ "REACTOME:R-BTA-1237044", "REACTOME:R-BTA-1247673", "REACTOME:R-BTA-432040", "REACTOME:R-BTA-432047", "REACTOME:R-CFA-1237044", "REACTOME:R-CFA-1247673", "REACTOME:R-CFA-432040", "REACTOME:R-CFA-432047", "REACTOME:R-DDI-1237044", "REACTOME:R-DDI-1247673", "REACTOME:R-DDI-432040", "REACTOME:R-D...
43
[ "1fqy", "1fx8", "1h6i", "1ih5", "1j4n", "1lda", "1ldf", "1ldi", "1rc2", "1sor", "1ymg", "1z98", "2abm", "2b5f", "2b6o", "2b6p", "2c32", "2d57", "2evu", "2f2b", "2o9d", "2o9e", "2o9f", "2o9g", "2w1p", "2w2e", "2zz9", "3cll", "3cn5", "3cn6", "3d9s", "3gd8"...
81
[ "PUB00005368", "PUB00025063", "PUB00028718", "PUB00053662" ]
[ "1715617", "11039922", "11780053", "10957645" ]
[ "Tandem sequence repeats in transmembrane channel proteins.", "Structure of a glycerol-conducting channel and the basis for its selectivity.", "Structural basis of water-specific transport through the AQP1 water channel.", "Crystallization and preliminary X-ray crystallographic analysis of water channel AQP1....
[ 1991, 2000, 2001, 2000 ]
4
[]
[]
0
0
null
[ "Archaea", "Bacteria", "Caudovirales sp. ctTqA28", "Eukaryota", "metagenomes" ]
[ 436, 24739, 1, 35356, 258 ]
5
[ "Arabidopsis thaliana", "Caenorhabditis elegans", "Danio rerio", "Drosophila melanogaster", "Escherichia coli (strain K12)", "Homo sapiens", "Mus musculus", "Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)", "Oryza sativa subsp. japonica", "Rattus norvegicus",...
[ 117, 12, 18, 19, 2, 42, 28, 1, 71, 38, 3, 1, 192 ]
13
true
Conserved_site
Major intrinsic protein, conserved site
Major intrinsic protein, conserved site
MIP_CS
3
IPR022359
22,359
Aminoglycoside phosphotransferase, bacteria
Aminoglycoside_PTrfase_bact
Domain
15
false
false
This entry includes enzymes found in the rumen bacterium Fibrobacter succinogenes subsp succinogenes S85. They are homologous to the aminoglycoside phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics.
[]
[]
[]
0
[ "NCBIFAM" ]
[ "TIGR02172" ]
[ "Fb_sc_TIGR02172" ]
[ 15 ]
1
[]
[]
[]
0
[]
0
[]
[]
[]
[]
0
[ "IPR002575" ]
[]
1
0
1
[ "FCB group" ]
[ 15 ]
1
[]
[]
0
true
Domain
Aminoglycoside phosphotransferase, bacteria
Aminoglycoside phosphotransferase, bacteria
Aminoglycoside_PTrfase_bact
4
IPR022361
22,361
Tumour necrosis factor receptor 11A
TNFR_11A
Family
671
false
false
The tumour necrosis factor (TNF) receptor (TNFR) superfamily comprises more than 20 type-I transmembrane proteins. Family members are defined based on similarity in their extracellular domain - a region that contains many cysteine residues arranged in a specific repetitive pattern [ ]. The cysteines allow formation of ...
[]
[]
[]
0
[ "PRINTS" ]
[ "PR01974" ]
[ "TNFACTORR11A" ]
[ 671 ]
1
[ "REACTOME", "REACTOME", "REACTOME", "REACTOME" ]
[ "R-HSA-5668541", "R-HSA-5676594", "R-MMU-5668541", "R-MMU-5676594" ]
[ "REACTOME:R-HSA-5668541", "REACTOME:R-HSA-5676594", "REACTOME:R-MMU-5668541", "REACTOME:R-MMU-5676594" ]
4
[]
0
[ "PUB00000892", "PUB00046030", "PUB00046031", "PUB00046032", "PUB00046033", "PUB00046034", "PUB00053612", "PUB00053613", "PUB00053663" ]
[ "8387891", "7917108", "15500863", "11239407", "9826575", "9826574", "9878548", "11485016", "19416721" ]
[ "Crystal structure of the soluble human 55 kd TNF receptor-human TNF beta complex: implications for TNF receptor activation.", "Tumor necrosis factor receptor superfamily members and their ligands.", "Assembly of post-receptor signaling complexes for the tumor necrosis factor receptor superfamily.", "The TNF ...
[ 1993, 1994, 2004, 2001, 1998, 1998, 1998, 2001, 2009 ]
9
[]
[]
0
0
null
[ "Tetrapoda" ]
[ 671 ]
1
[ "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]
[ 1, 1, 2 ]
3
true
Family
Tumour necrosis factor receptor 11A
Tumour necrosis factor receptor 11A
TNFR_11A
3
IPR022362
22,362
Neurogenic locus notch homolog protein 1
Notch_1
Family
1,814
false
false
Notch cell surface receptors are large, single-pass type-1 transmembrane proteins found in a diverse range of metazoan species, from human to Caenorhabditis species. The fruit fly, Drosophila melanogaster, possesses only one Notch protein, whereas in C.elegans, two receptors have been found; by contrast, four Notch par...
[ "GO:0038023", "GO:0006355", "GO:0007219" ]
[ "signaling receptor activity", "regulation of DNA-templated transcription", "Notch signaling pathway" ]
[ "molecular_function", "biological_process", "biological_process" ]
3
[ "PRINTS" ]
[ "PR01984" ]
[ "NOTCH1" ]
[ 1814 ]
1
[ "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOM...
[ "R-HSA-1912399", "R-HSA-1912408", "R-HSA-1912420", "R-HSA-210744", "R-HSA-2122947", "R-HSA-2122948", "R-HSA-2644606", "R-HSA-2644607", "R-HSA-2660826", "R-HSA-2691232", "R-HSA-2894862", "R-HSA-350054", "R-HSA-5083630", "R-HSA-8941856", "R-HSA-9013508", "R-HSA-9013695", "R-HSA-9793380...
[ "REACTOME:R-HSA-1912399", "REACTOME:R-HSA-1912408", "REACTOME:R-HSA-1912420", "REACTOME:R-HSA-210744", "REACTOME:R-HSA-2122947", "REACTOME:R-HSA-2122948", "REACTOME:R-HSA-2644606", "REACTOME:R-HSA-2644607", "REACTOME:R-HSA-2660826", "REACTOME:R-HSA-2691232", "REACTOME:R-HSA-2894862", "REACTOME...
31
[]
0
[ "PUB00013432", "PUB00053622", "PUB00053623", "PUB00053624", "PUB00053625", "PUB00053626", "PUB00053638", "PUB00053664" ]
[ "10221902", "19379690", "12354787", "11101851", "12668592", "16429119", "10206645", "15145534" ]
[ "Notch signaling: cell fate control and signal integration in development.", "The canonical Notch signaling pathway: unfolding the activation mechanism.", "The disintegrin/metalloprotease ADAM 10 is essential for Notch signalling but not for alpha-secretase activity in fibroblasts.", "MAML1, a human homologue...
[ 1999, 2009, 2002, 2000, 2003, 2006, 1999, 2004 ]
8
[ "IPR008297" ]
[]
1
0
1
[ "Gnathostomata" ]
[ 1814 ]
1
[ "Danio rerio", "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]
[ 5, 6, 1, 2 ]
4
true
Family
Neurogenic locus notch homolog protein 1
Neurogenic locus notch homolog protein 1
Notch_1
9
IPR022363
22,363
Bacteriophage TP901-1, major tail protein
Phage_TP901-1_major-tail
Family
42
false
false
Two major structural proteins from the lactococcal temperate bacteriophage TP901-1 have been sequenced: the Major Head Protein (MHP) and the Major Tail Protein (MTP) [ ]. Homologues of the major tail protein have since been found in Staphylococcus, Streptococcus and Lactobacillus phages. The sequences are fairly short,...
[]
[]
[]
0
[ "PRINTS" ]
[ "PR01999" ]
[ "MTP2LACTO" ]
[ 42 ]
1
[]
[]
[]
0
[]
0
[ "PUB00015485" ]
[ "8610457" ]
[ "A genomic region of lactococcal temperate bacteriophage TP901-1 encoding major virion proteins." ]
[ 1996 ]
1
[ "IPR022345" ]
[]
1
0
1
[ "Bacillota", "Caudoviricetes" ]
[ 32, 10 ]
2
[]
[]
0
true
Family
Bacteriophage TP901-1, major tail protein
Bacteriophage TP901-1, major tail protein
Phage_TP901-1_major-tail
9
IPR022365
22,365
Clathrin, heavy chain, propeller repeat
Clathrin_H-chain_propeller_rpt
Repeat
7,678
false
false
This entry represents the propeller repeat found in clathrin heavy chains. The N terminus of the heavy chain is known as the globular domain, and is composed of seven repeats which form a β propeller [ ]. Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi appa...
[]
[]
[]
0
[ "PFAM" ]
[ "PF01394" ]
[ "Clathrin_propel" ]
[ 7678 ]
1
[ "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOM...
[ "R-BTA-177504", "R-BTA-190873", "R-BTA-196025", "R-BTA-2132295", "R-BTA-432720", "R-BTA-432722", "R-BTA-437239", "R-BTA-5099900", "R-BTA-5140745", "R-BTA-8856825", "R-BTA-8856828", "R-BTA-8866427", "R-BTA-8964038", "R-BTA-9013420", "R-BTA-9013424", "R-CEL-190873", "R-CEL-196025", "...
[ "REACTOME:R-BTA-177504", "REACTOME:R-BTA-190873", "REACTOME:R-BTA-196025", "REACTOME:R-BTA-2132295", "REACTOME:R-BTA-432720", "REACTOME:R-BTA-432722", "REACTOME:R-BTA-437239", "REACTOME:R-BTA-5099900", "REACTOME:R-BTA-5140745", "REACTOME:R-BTA-8856825", "REACTOME:R-BTA-8856828", "REACTOME:R-BT...
114
[ "1bpo", "1c9i", "1c9l", "1utc", "1xi4", "1xi5", "2xzg", "3gc3", "3gd1", "3iyv", "4g55", "5m5r", "5m5s", "5m5t", "5m5u", "5m5v", "5m61", "5ods", "6e4l", "6qnn", "6qnp", "6sct", "6wcj", "6yai", "7bn1", "7bn2", "7om8", "7zx4", "9c0y", "9c0z", "9ex5", "9exf"...
36
[ "PUB00000964", "PUB00035753", "PUB00035765", "PUB00035769", "PUB00035906", "PUB00035907", "PUB00035908", "PUB00035909" ]
[ "9827808", "17449236", "11598180", "15261670", "15752139", "16806884", "16734666", "16699812" ]
[ "Atomic structure of clathrin: a beta propeller terminal domain joins an alpha zigzag linker.", "Do different endocytic pathways make different synaptic vesicles?", "Adaptins: the final recount.", "COP and clathrin-coated vesicle budding: different pathways, common approaches.", "New faces of the familiar c...
[ 1998, 2007, 2001, 2004, 2005, 2006, 2006, 2006 ]
8
[]
[]
0
0
null
[ "Eukaryota" ]
[ 7678 ]
1
[ "Arabidopsis thaliana", "Caenorhabditis elegans", "Danio rerio", "Drosophila melanogaster", "Homo sapiens", "Mus musculus", "Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)", "Oryza sativa subsp. japonica", "Rattus norvegicus", "Saccharomyces cerevisiae (strai...
[ 6, 1, 9, 2, 24, 6, 1, 6, 7, 1, 1, 122 ]
12
true
Repeat
Clathrin, heavy chain, propeller repeat
Clathrin, heavy chain, propeller repeat
Clathrin_H-chain_propeller_rpt
1
IPR022367
22,367
2-oxoacid:acceptor oxidoreductase, alpha subunit
2-oxoacid/accept_OxRdtase_asu
Family
8,697
false
false
This entry represents the alpha subunit of 2-oxoacid:acceptor oxidoreductases, which catalyse CoA-dependent oxidative decarboxylation of 2-oxoacids. Proteins in this family contain a thiamine diphosphate (TPP) binding domain typical of flavodoxin/ferredoxin oxidoreductases ( ), and an N-terminal domain similar to the g...
[]
[]
[]
0
[ "NCBIFAM" ]
[ "TIGR03710" ]
[ "OAFO_sf" ]
[ 8697 ]
1
[ "EC", "GP" ]
[ "1.2.7.11", "GenProp0842" ]
[ "EC:1.2.7.11", "GP:GenProp0842" ]
2
[ "5b46", "5b47", "5b48", "6n2n", "6n2o" ]
5
[ "PUB00053665", "PUB00053666", "PUB00053667", "PUB00053668", "PUB00074309", "PUB00074310", "PUB00074311" ]
[ "8902625", "11401501", "8655524", "15184674", "6266826", "6266827", "1555599" ]
[ "2-oxoacid:ferredoxin oxidoreductase from the thermoacidophilic archaeon, Sulfolobus sp. strain 7.", "The genes for anabolic 2-oxoglutarate: ferredoxin oxidoreductase from Hydrogenobacter thermophilus TK-6.", "Purification and characterization of 2-oxoglutarate:ferredoxin oxidoreductase from a thermophilic, obl...
[ 1996, 2001, 1996, 2004, 1981, 1981, 1992 ]
7
[]
[]
0
0
null
[ "Archaea", "Bacteria", "Eukaryota", "unclassified sequences" ]
[ 1137, 7342, 17, 201 ]
4
[]
[]
0
true
Family
2-oxoacid:acceptor oxidoreductase, alpha subunit
2-oxoacid:acceptor oxidoreductase, alpha subunit
2-oxoacid/accept_OxRdtase_asu
2
IPR022368
22,368
Putative thiazole-containing bacteriocin maturation protein
Thiazole_bacteriocin_mat_put
Family
547
false
false
Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this ...
[]
[]
[]
0
[ "NCBIFAM" ]
[ "TIGR03693" ]
[ "ocin_ThiF_like" ]
[ 547 ]
1
[]
[]
[]
0
[]
0
[]
[]
[]
[]
0
[]
[]
0
0
null
[ "Bacillales" ]
[ 547 ]
1
[]
[]
0
true
Family
Putative thiazole-containing bacteriocin maturation protein
Putative thiazole-containing bacteriocin maturation protein
Thiazole_bacteriocin_mat_put
9
IPR022369
22,369
Integral membrane protein TerC, riboswitch-linked
Integral_membrane_TerC_rswitch
Family
16,249
false
false
This entry represents a subset of TerC proteins which are mostly encoded on genes preceded by a structured RNA element known as the yybP-ykoY leader. The yybP-ykoY leader (also known as SraF) may function in the regulation of these genes as riboswitch [ ]. This entry also includes the putative membrane-bound redox modu...
[ "GO:0016020" ]
[ "membrane" ]
[ "cellular_component" ]
1
[ "NCBIFAM" ]
[ "TIGR03718" ]
[ "R_switched_Alx" ]
[ 16249 ]
1
[]
[]
[]
0
[]
0
[ "PUB00008408", "PUB00009923", "PUB00053669", "PUB00076704", "PUB00085185" ]
[ "10069007", "12107143", "15096624", "18429937", "24612058" ]
[ "In vivo and in vitro cloning and phenotype characterization of tellurite resistance determinant conferred by plasmid pTE53 of a clinical isolate of Escherichia coli.", "pH-dependent expression of periplasmic proteins and amino acid catabolism in Escherichia coli.", "New RNA motifs suggest an expanded scope for...
[ 1998, 2002, 2004, 2008, 2014 ]
5
[]
[]
0
0
null
[ "Archaea", "Bacteria", "Caudoviricetes", "Eukaryota", "unclassified sequences" ]
[ 30, 15278, 38, 705, 198 ]
5
[ "Arabidopsis thaliana", "Escherichia coli (strain K12)", "Oryza sativa subsp. japonica", "Zea mays" ]
[ 5, 1, 2, 7 ]
4
true
Family
Integral membrane protein TerC, riboswitch-linked
Integral membrane protein TerC, riboswitch-linked
Integral_membrane_TerC_rswitch
3
IPR022370
22,370
Phosphosulpholactate synthase
Arch_ComA
Family
83
false
false
This entry represents the ComA (Coenzyme M biosynthesis A) protein and phosphosulpholactate synthase in methanogenic archaea. The ComABC pathway is one of at least two pathways to the intermediate sulphopyruvate. Coenzyme M occurs rarely and sporadically outside of the archaea.
[ "GO:0043817", "GO:0019295" ]
[ "phosphosulfolactate synthase activity", "coenzyme M biosynthetic process" ]
[ "molecular_function", "biological_process" ]
2
[ "NCBIFAM" ]
[ "TIGR03849" ]
[ "arch_ComA" ]
[ 83 ]
1
[]
[]
[]
0
[ "1qwg", "9cm1" ]
2
[]
[]
[]
[]
0
[ "IPR003830" ]
[]
1
0
1
[ "Methanomada group", "bioreactor metagenome" ]
[ 82, 1 ]
2
[]
[]
0
true
Family
Phosphosulpholactate synthase
Phosphosulpholactate synthase
Arch_ComA
4
IPR022371
22,371
Exopolyphosphatase
Exopolyphosphatase
Domain
6,594
false
false
Exopolyphosphatases (Ppx) is involved in the degradation of inorganic polyphosphates [ ] and belongs to the same family as the guanosine pentaphosphate phosphatase [ ].
[ "GO:0004309", "GO:0006793" ]
[ "exopolyphosphatase activity", "phosphorus metabolic process" ]
[ "molecular_function", "biological_process" ]
2
[ "NCBIFAM" ]
[ "TIGR03706" ]
[ "exo_poly_only" ]
[ 6594 ]
1
[ "EC", "GP" ]
[ "3.6.1", "GenProp0840" ]
[ "EC:3.6.1", "GP:GenProp0840" ]
2
[ "1u6z", "2flo", "3hi0", "8jgw", "8jgx" ]
5
[ "PUB00008176", "PUB00073652" ]
[ "8212131", "8380170" ]
[ "Exopolyphosphate phosphatase and guanosine pentaphosphate phosphatase belong to the sugar kinase/actin/hsp 70 superfamily.", "An exopolyphosphatase of Escherichia coli. The enzyme and its ppx gene in a polyphosphate operon." ]
[ 1993, 1993 ]
2
[ "IPR003695" ]
[]
1
0
1
[ "Bacteria", "Opisthokonta", "unclassified sequences" ]
[ 6549, 4, 41 ]
3
[ "Escherichia coli (strain K12)" ]
[ 1 ]
1
true
Domain
Exopolyphosphatase
Exopolyphosphatase
Exopolyphosphatase
9
IPR022372
22,372
Accessory secretory system protein Asp1
Accessory_SS_Asp1
Family
1,037
false
false
This entry represents Asp1 which, along with SecY2 and SecA2, is part of the accessory secretory protein system [ , ]. This system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein...
[ "GO:0015031" ]
[ "protein transport" ]
[ "biological_process" ]
1
[ "PFAM", "NCBIFAM" ]
[ "PF16993", "TIGR03713" ]
[ "Asp1", "acc_sec_asp1" ]
[ 1037, 767 ]
2
[]
[]
[]
0
[ "5vae", "5vaf", "6lnw", "6oyc" ]
4
[ "PUB00053479", "PUB00098563" ]
[ "18621893", "32037091" ]
[ "Characterization of the accessory Sec system of Staphylococcus aureus.", "Structural and functional insights into the Asp1/2/3 complex mediated secretion of pneumococcal serine-rich repeat protein PsrP." ]
[ 2008, 2020 ]
2
[]
[]
0
0
null
[ "Bacteria", "human gut metagenome" ]
[ 1036, 1 ]
2
[]
[]
0
true
Family
Accessory secretory system protein Asp1
Accessory secretory system protein Asp1
Accessory_SS_Asp1
5
IPR022373
22,373
KaiC domain-containing protein
KaiC_containing
Family
143
false
false
This entry represents KaiC domain-containing proteins that occur across a broad taxonomic range (Euryarchaeota, Aquificae, Dictyoglomi, Epsilonproteobacteria, and Firmicutes), but exclusively in thermophiles.
[]
[]
[]
0
[ "NCBIFAM" ]
[ "TIGR03878" ]
[ "thermo_KaiC_2" ]
[ 143 ]
1
[]
[]
[]
0
[]
0
[]
[]
[]
[]
0
[]
[]
0
0
null
[ "Bacteria", "Methanobacteriati" ]
[ 128, 15 ]
2
[]
[]
0
true
Family
KaiC domain-containing protein
KaiC domain-containing protein
KaiC_containing
1
IPR022374
22,374
Energy-dependent translational throttle protein EttA
EttA
Family
17,261
false
false
ABC-F proteins compose one of the most widely distributed branches of the ATP-binding cassette (ABC) superfamily. EttA/YjjK is the most prevalent eubacterial ABC-F protein. Its role consists in gating ribosome entry into the translation elongation cycle through a nucleotide-dependent interaction sensitive to ATP/ADP ra...
[ "GO:0045900" ]
[ "negative regulation of translational elongation" ]
[ "biological_process" ]
1
[ "HAMAP", "PANTHER", "NCBIFAM" ]
[ "MF_00847", "PTHR43858", "TIGR03719" ]
[ "EttA", "", "ABC_ABC_ChvD" ]
[ 16298, 17261, 16295 ]
3
[ "EC", "METACYC", "METACYC", "METACYC", "METACYC", "METACYC", "METACYC", "METACYC", "METACYC", "METACYC", "METACYC" ]
[ "3.6.1.-", "PWY-5757", "PWY-6147", "PWY-6383", "PWY-6797", "PWY-7206", "PWY-7419", "PWY-7539", "PWY-7719", "PWY-7821", "PWY-8289" ]
[ "EC:3.6.1.-", "METACYC:PWY-5757", "METACYC:PWY-6147", "METACYC:PWY-6383", "METACYC:PWY-6797", "METACYC:PWY-7206", "METACYC:PWY-7419", "METACYC:PWY-7539", "METACYC:PWY-7719", "METACYC:PWY-7821", "METACYC:PWY-8289" ]
11
[ "3j5s", "4fin", "7msc", "7msh", "7msm", "7msz", "7mu0", "9nl5", "9nlb", "9nle" ]
10
[ "PUB00086945", "PUB00086976" ]
[ "24389466", "24389465" ]
[ "The ABC-F protein EttA gates ribosome entry into the translation elongation cycle.", "EttA regulates translation by binding the ribosomal E site and restricting ribosome-tRNA dynamics." ]
[ 2014, 2014 ]
2
[]
[]
0
0
null
[ "Bacteria", "Eukaryota", "unclassified sequences" ]
[ 16508, 355, 398 ]
3
[ "Escherichia coli (strain K12)", "Zea mays" ]
[ 1, 1 ]
2
true
Family
Energy-dependent translational throttle protein EttA
Energy-dependent translational throttle protein EttA
EttA
7
IPR022377
22,377
Small hydrophilic plant seed protein, conserved site
Sm_Hydphi_plant_seed_CS
Conserved_site
795
false
false
This entry represents a conserved site in hydrophilic plant seed proteins that are structurally related: Arabidopsis thaliana proteins GEA1 and GEA6 Cotton late embryogenesis abundant (LEA) protein D-19 Carrot EMB-1 protein Barley LEA proteins B19.1A, B19.1B, B19.3 and B19.4 Maize late embryogenesis abundant protein Em...
[]
[]
[]
0
[ "PROSITE" ]
[ "PS00431" ]
[ "SMALL_HYDR_PLANT_SEED" ]
[ 795 ]
1
[]
[]
[]
0
[]
0
[ "PUB00003758", "PUB00015278" ]
[ "8492809", "12231998" ]
[ "Two different Em-like genes are expressed in Arabidopsis thaliana seeds during maturation.", "Molecular Responses to Water Deficit." ]
[ 1993, 1993 ]
2
[]
[]
0
0
null
[ "Eukaryota" ]
[ 795 ]
1
[ "Arabidopsis thaliana", "Oryza sativa subsp. japonica", "Zea mays" ]
[ 7, 1, 5 ]
3
true
Conserved_site
Small hydrophilic plant seed protein, conserved site
Small hydrophilic plant seed protein, conserved site
Sm_Hydphi_plant_seed_CS
2
IPR022378
22,378
F420-dependent oxidoreductase-predicted, MSMEG2249
F420_OxRdatse_MSMEG2249_pred
Family
812
false
false
Coenzyme F420 has a limited phylogenetic distribution, including methanogenic archaea, Mycobacterium tuberculosis and related species, Colwellia psychrerythraea 34H and Rhodopseudomonas palustris HaA2. Partial phylogenetic profiling identifies protein subfamilies, within the larger family called luciferase-like monooxy...
[]
[]
[]
0
[ "NCBIFAM" ]
[ "TIGR03857" ]
[ "F420_MSMEG_2249" ]
[ 812 ]
1
[ "GP" ]
[ "GenProp0002" ]
[ "GP:GenProp0002" ]
1
[]
0
[]
[]
[]
[]
0
[]
[]
0
0
null
[ "Bacteria", "Symbiodinium pilosum", "freshwater metagenome" ]
[ 773, 2, 37 ]
3
[]
[]
0
true
Family
F420-dependent oxidoreductase-predicted, MSMEG2249
F420-dependent oxidoreductase-predicted, MSMEG2249
F420_OxRdatse_MSMEG2249_pred
3
IPR022379
22,379
11-S seed storage protein, conserved site
11S_seedstore_CS
Conserved_site
1,632
false
false
Plant seed storage proteins, whose principal function appears to be the major nitrogen source for the developing plant, can be classified, on the basis of their structure, into different families. 11-S are non-glycosylated proteins which form hexameric structures [ , ]. Each of the subunits in the hexamer is itself com...
[]
[]
[]
0
[ "PROSITE" ]
[ "PS00305" ]
[ "11S_SEED_STORAGE" ]
[ 1632 ]
1
[]
[]
[]
0
[ "1fxz", "1od5", "1ucx", "1ud1", "2d5f", "2d5h", "2e9q", "2evx", "3c3v", "3ehk", "3fz3", "3kgl", "3ksc", "3qac", "5gyl", "5wxu", "6b4s", "8uai", "9v45", "9v4f" ]
20
[ "PUB00001358", "PUB00004572" ]
[ "2450746", "16666210" ]
[ "Nucleotide sequence of cloned cDNA coding for pumpkin 11-S globulin beta subunit.", "Molecular Characterization of Oat Seed Globulins." ]
[ 1988, 1988 ]
2
[]
[]
0
0
null
[ "Bacteria", "Eukaryota" ]
[ 2, 1630 ]
2
[ "Arabidopsis thaliana", "Oryza sativa subsp. japonica" ]
[ 13, 32 ]
2
true
Conserved_site
11-S seed storage protein, conserved site
11-S seed storage protein, conserved site
11S_seedstore_CS
3
IPR022380
22,380
Glutamyl-Q tRNA(Asp) synthetase
Glu-Q_tRNA(Asp)_Synthase
Family
8,210
false
false
This protein resembles a shortened glutamyl-tRNA ligase, but its purpose is to modify tRNA(Asp) at a queuosine position in the anticodon rather than to charge a tRNA with its cognate amino acid [ , ]. It catalyses the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate o...
[ "GO:0000166", "GO:0004812", "GO:0008270", "GO:0006400", "GO:0006424" ]
[ "nucleotide binding", "aminoacyl-tRNA ligase activity", "zinc ion binding", "tRNA modification", "glutamyl-tRNA aminoacylation" ]
[ "molecular_function", "molecular_function", "molecular_function", "biological_process", "biological_process" ]
5
[ "HAMAP", "NCBIFAM" ]
[ "MF_01428", "TIGR03838" ]
[ "Glu_Q_tRNA_synth", "queuosine_YadB" ]
[ 7728, 8009 ]
2
[ "EC" ]
[ "6.1.1.-" ]
[ "EC:6.1.1.-" ]
1
[ "1nzj", "4a91" ]
2
[ "PUB00050376", "PUB00053672", "PUB00053673", "PUB00100052", "PUB00100054" ]
[ "18602926", "16164993", "15096612", "15096594", "24505021" ]
[ "Crystal structure of glutamyl-queuosine tRNAAsp synthetase complexed with L-glutamate: structural elements mediating tRNA-independent activation of glutamate and glutamylation of tRNAAsp anticodon.", "Glu-Q-tRNA(Asp) synthetase coded by the yadB gene, a new paralog of aminoacyl-tRNA synthetase that glutamylates ...
[ 2008, 2005, 2004, 2004, 2014 ]
5
[ "IPR049940" ]
[]
1
0
1
[ "Bacteria", "Eukaryota", "unclassified sequences" ]
[ 8110, 6, 94 ]
3
[ "Escherichia coli (strain K12)" ]
[ 1 ]
1
true
Family
Glutamyl-Q tRNA(Asp) synthetase
Glutamyl-Q tRNA(Asp) synthetase
Glu-Q_tRNA(Asp)_Synthase
3
IPR022381
22,381
Uncharacterised protein family MG067
Uncharacterised_MG067
Family
524
false
false
Mycoplasma genitalium has the smallest known genome of any free-living organism. Its complete genome sequence has been determined by whole genome random sequencing and assembly. Only 470 putative coding regions were identified, including genes for DNA replication, transcription and translation, DNA repair, cellular tra...
[]
[]
[]
0
[ "PRINTS" ]
[ "PR00840" ]
[ "Y06768FAMILY" ]
[ 524 ]
1
[]
[]
[]
0
[ "7adk" ]
1
[]
[]
[]
[]
0
[]
[]
0
0
null
[ "Mycoplasmatota" ]
[ 524 ]
1
[]
[]
0
true
Family
Uncharacterised protein family MG067
Uncharacterised protein family MG067
Uncharacterised_MG067
8
IPR022382
22,382
Mycoplasma immunoglobulin protease
MIP_domain
Domain
866
false
false
This is the serine protease domain of MIP (Mycoplasma immunoglobulin protease), a protein that is related to pathogenicity of animal and human pathogenic Mycoplasmas [ , , ]. This protein functions together with the Ig binding protein M (MIB) to evade host Ig-mediated defense against the MIB-MIP system, which is a nove...
[]
[]
[]
0
[ "PFAM" ]
[ "PF01732" ]
[ "Mycop_pep_DUF31" ]
[ 866 ]
1
[]
[]
[]
0
[ "7adk" ]
1
[ "PUB00098027", "PUB00098028", "PUB00098029", "PUB00151017" ]
[ "32373096", "31497004", "31540994", "33674316" ]
[ "Characterization of an Immunoglobulin Binding Protein (IbpM) From Mycoplasma pneumoniae.", "Subversion of the Immune Response by Human Pathogenic Mycoplasmas.", "Proteases as Secreted Exoproteins in Mycoplasmas from Ruminant Lungs and Their Impact on Surface-Exposed Proteins.", "The mycoplasma surface protei...
[ 2020, 2019, 2019, 2021 ]
4
[]
[]
0
0
null
[ "Bacteria" ]
[ 866 ]
1
[]
[]
0
true
Domain
Mycoplasma immunoglobulin protease
Mycoplasma immunoglobulin protease
MIP_domain
2
IPR022383
22,383
Lactate/malate dehydrogenase, C-terminal
Lactate/malate_DH_C
Domain
63,311
false
false
This entry represents the C-terminal, and is thought to be an is an unusual α+β fold. L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [ ]. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L...
[ "GO:0016616" ]
[ "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" ]
[ "molecular_function" ]
1
[ "PFAM" ]
[ "PF02866" ]
[ "Ldh_1_C" ]
[ 63311 ]
1
[ "EC", "EC", "METACYC", "METACYC", "METACYC", "METACYC", "METACYC", "METACYC", "METACYC", "METACYC", "METACYC", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "...
[ "1.1.1", "1.1.1.37", "PWY-1622", "PWY-5392", "PWY-561", "PWY-5690", "PWY-6728", "PWY-6969", "PWY-7115", "PWY-7383", "PWY-8086", "R-BTA-70268", "R-BTA-71403", "R-BTA-9837999", "R-BTA-9856872", "R-BTA-9861718", "R-CEL-70268", "R-CEL-71403", "R-CEL-9837999", "R-CEL-9856872", "R-...
[ "EC:1.1.1", "EC:1.1.1.37", "METACYC:PWY-1622", "METACYC:PWY-5392", "METACYC:PWY-561", "METACYC:PWY-5690", "METACYC:PWY-6728", "METACYC:PWY-6969", "METACYC:PWY-7115", "METACYC:PWY-7383", "METACYC:PWY-8086", "REACTOME:R-BTA-70268", "REACTOME:R-BTA-71403", "REACTOME:R-BTA-9837999", "REACTOM...
53
[ "1a5z", "1b8p", "1b8u", "1b8v", "1bdm", "1bmd", "1ceq", "1cet", "1civ", "1d3a", "1emd", "1ez4", "1guy", "1guz", "1gv0", "1gv1", "1hlp", "1hye", "1hyg", "1hyh", "1i0z", "1i10", "1ib6", "1ie3", "1iz9", "1ldb", "1ldg", "1ldm", "1ldn", "1llc", "1lld", "1lth"...
328
[ "PUB00025866", "PUB00027386" ]
[ "11276087", "8117664" ]
[ "Structural basis for altered activity of M- and H-isozyme forms of human lactate dehydrogenase.", "Refined crystal structure of mitochondrial malate dehydrogenase from porcine heart and the consensus structure for dicarboxylic acid oxidoreductases." ]
[ 2001, 1994 ]
2
[]
[]
0
0
null
[ "Archaea", "Bacteria", "Eukaryota", "unclassified Caudoviricetes", "unclassified sequences" ]
[ 863, 32514, 29357, 2, 575 ]
5
[ "Arabidopsis thaliana", "Caenorhabditis elegans", "Danio rerio", "Drosophila melanogaster", "Escherichia coli (strain K12)", "Homo sapiens", "Mus musculus", "Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)", "Oryza sativa subsp. japonica", "Rattus norvegicus",...
[ 51, 4, 35, 13, 2, 42, 26, 3, 33, 35, 3, 2, 71 ]
13
true
Domain
Lactate/malate dehydrogenase, C-terminal
Lactate/malate dehydrogenase, C-terminal
Lactate/malate_DH_C
7
IPR022384
22,384
Formiminotransferase catalytic domain superfamily
FormiminoTrfase_cat_dom_sf
Homologous_superfamily
5,242
false
false
This entry represents the formiminotransferase (FT) domain of formiminotransferase-cyclodeaminase (FTCD), which forms a homodimer, with each protomer being comprised of two subdomains. Each subdomain has the structure consisting of an α/β sandwich with antiparallel β-sheet in the form (β-α-β)x2. Tetrahydrofolate (THF)-...
[ "GO:0005542", "GO:0016740" ]
[ "folic acid binding", "transferase activity" ]
[ "molecular_function", "molecular_function" ]
2
[ "SSF" ]
[ "SSF55116" ]
[ "" ]
[ 5242 ]
1
[ "EC", "METACYC", "REACTOME", "REACTOME", "REACTOME", "REACTOME" ]
[ "2.1.2.5", "PWY-5030", "R-DDI-70921", "R-HSA-70921", "R-MMU-70921", "R-RNO-70921" ]
[ "EC:2.1.2.5", "METACYC:PWY-5030", "REACTOME:R-DDI-70921", "REACTOME:R-HSA-70921", "REACTOME:R-MMU-70921", "REACTOME:R-RNO-70921" ]
6
[ "1qd1", "1tt9", "2pfd" ]
3
[ "PUB00007432", "PUB00015609" ]
[ "10673422", "12815595" ]
[ "The crystal structure of the formiminotransferase domain of formiminotransferase-cyclodeaminase: implications for substrate channeling in a bifunctional enzyme.", "The molecular basis of glutamate formiminotransferase deficiency." ]
[ 2000, 2003 ]
2
[]
[]
0
0
null
[ "Archaea", "Bacteria", "Eukaryota", "unclassified sequences" ]
[ 38, 1763, 3260, 181 ]
4
[ "Arabidopsis thaliana", "Danio rerio", "Homo sapiens", "Mus musculus", "Oryza sativa subsp. japonica", "Rattus norvegicus", "Zea mays" ]
[ 8, 22, 7, 1, 10, 2, 40 ]
7
true
Homologous_superfamily
Formiminotransferase catalytic domain superfamily
Formiminotransferase catalytic domain superfamily
FormiminoTrfase_cat_dom_sf
9
IPR022385
22,385
Rhs repeat-associated core
Rhs_assc_core
Domain
51,763
false
false
This entry represents a conserved unique core sequence shared by large numbers of proteins. It is occasionally found in the Archaea, including Methanosarcina barkeri) but commonly found in the bacteria and eukaryotes. Most fall into two large classes. One class consists of long proteins in which two classes of repeats ...
[]
[]
[]
0
[ "NCBIFAM" ]
[ "TIGR03696" ]
[ "Rhs_assc_core" ]
[ 51763 ]
1
[]
[]
[]
0
[ "4igl", "4o9x", "5kis", "6cmx", "6fay", "6fb3", "6h6e", "6h6f", "6h6g", "6l7i", "6ska", "6ske", "6sue", "6suf", "6sup", "6suq", "6u08", "7bam", "7ban", "7bao", "7pq5", "7q97", "8cp6", "8fjp", "8h8a", "8h8b", "8h8c", "8qja", "8qjb", "8qjc", "8qjd", "8r50"...
36
[ "PUB00070343", "PUB00070351" ]
[ "23913273", "22841666" ]
[ "The BC component of ABC toxins is an RHS-repeat-containing protein encapsulation device.", "Teneurin protein family: an emerging role in human tumorigenesis and drug resistance." ]
[ 2013, 2012 ]
2
[]
[]
0
0
null
[ "Archaea", "Bacteria", "Caudoviricetes", "Eukaryota", "unclassified sequences" ]
[ 70, 43978, 6, 7402, 307 ]
5
[ "Danio rerio", "Drosophila melanogaster", "Escherichia coli (strain K12)", "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]
[ 138, 1, 8, 12, 10, 29 ]
6
true
Domain
Rhs repeat-associated core
Rhs repeat-associated core
Rhs_assc_core
4
IPR022386
22,386
Carbohydrate ABC transporter, N-acetylglucosamine/diacetylchitobiose-binding protein
Chitin_NgcE
Family
1,987
false
false
Bacterial high affinity transport systems are involved in active transport of solutes across the cytoplasmic membrane. Most of the bacterial ABC (ATP-binding cassette) importers are composed of one or two transmembrane permease proteins, one or two nucleotide-binding proteins and a highly specific periplasmic solute-bi...
[]
[]
[]
0
[ "NCBIFAM" ]
[ "TIGR03851" ]
[ "chitin_NgcE" ]
[ 1987 ]
1
[]
[]
[]
0
[]
0
[ "PUB00071925", "PUB00071938", "PUB00085824" ]
[ "18310026", "8003968", "16428842" ]
[ "Characterization of a Pseudomonas putida ABC transporter (AatJMQP) required for acidic amino acid uptake: biochemical properties and regulation by the Aau two-component system.", "Sequence relationships between integral inner membrane proteins of binding protein-dependent transport systems: evolution by recurren...
[ 2008, 1994, 2006 ]
3
[ "IPR006059" ]
[]
1
0
1
[ "Bacteria" ]
[ 1987 ]
1
[]
[]
0
true
Family
Carbohydrate ABC transporter, N-acetylglucosamine/diacetylchitobiose-binding protein
Carbohydrate ABC transporter, N-acetylglucosamine/diacetylchitobiose-binding protein
Chitin_NgcE
5
IPR022387
22,387
Carbohydrate ABC transporter substrate-binding, CPR0540
Bind_CPR0540
Family
512
false
false
Members of this protein are the substrate-binding protein of a predicted carbohydrate transporter operon, together with permease subunits of ABC transporter homology families. This substrate-binding protein frequently co-occurs in genomes with a family of disaccharide phosphorylases, , suggesting that the molecule tran...
[]
[]
[]
0
[ "NCBIFAM" ]
[ "TIGR03850" ]
[ "bind_CPR_0540" ]
[ 512 ]
1
[]
[]
[]
0
[ "9h0n", "9h0o", "9h0p" ]
3
[ "PUB00071925", "PUB00071938" ]
[ "18310026", "8003968" ]
[ "Characterization of a Pseudomonas putida ABC transporter (AatJMQP) required for acidic amino acid uptake: biochemical properties and regulation by the Aau two-component system.", "Sequence relationships between integral inner membrane proteins of binding protein-dependent transport systems: evolution by recurren...
[ 2008, 1994 ]
2
[ "IPR006059" ]
[]
1
0
1
[ "Bacteria", "metagenomes" ]
[ 510, 2 ]
2
[]
[]
0
true
Family
Carbohydrate ABC transporter substrate-binding, CPR0540
Carbohydrate ABC transporter substrate-binding, CPR0540
Bind_CPR0540
9
IPR022389
22,389
ParB-related, ThiF-related cassette, protein D
PRTRC_protein-D
Family
224
false
false
A novel genetic system, often found on plasmids, encodes six major proteins, included a ParB homologue and a ThiF homologue, and is designated PRTRC (ParB-Related, ThiF-Related Cassette). This entry represents PRTRC system protein D.
[]
[]
[]
0
[ "NCBIFAM" ]
[ "TIGR03739" ]
[ "PRTRC_D" ]
[ 224 ]
1
[ "GP" ]
[ "GenProp0854" ]
[ "GP:GenProp0854" ]
1
[]
0
[]
[]
[]
[]
0
[]
[]
0
0
null
[ "Gibberella intermedia", "Pseudomonadota", "ecological metagenomes" ]
[ 2, 219, 3 ]
3
[]
[]
0
true
Family
ParB-related, ThiF-related cassette, protein D
ParB-related, ThiF-related cassette, protein D
PRTRC_protein-D
1
IPR022390
22,390
4-hydroxybenzoate decarboxylase subunit C
HBDC
Family
2,590
false
false
This entry represents a group of bacterial archaeal decarboxylases, including the 4-hydroxybenzoate decarboxylase subunit C (also known as HBDC) from Chlamydophila pneumoniae AR39. HBDC catalyses the reversible decarboxylation of 4-hydroxybenzoate [ ].
[ "GO:0016831" ]
[ "carboxy-lyase activity" ]
[ "molecular_function" ]
1
[ "NCBIFAM" ]
[ "TIGR03701" ]
[ "mena_SCO4490" ]
[ 2590 ]
1
[ "GP" ]
[ "GenProp0829" ]
[ "GP:GenProp0829" ]
1
[]
0
[ "PUB00077014" ]
[ "17211544" ]
[ "Purification and characterization of a 4-hydroxybenzoate decarboxylase from Chlamydophila pneumoniae AR39." ]
[ 2007 ]
1
[ "IPR002830" ]
[]
1
0
1
[ "Archaea", "Bacteria", "Geodia barretti", "unclassified sequences" ]
[ 104, 2418, 15, 53 ]
4
[]
[]
0
true
Family
4-hydroxybenzoate decarboxylase subunit C
4-hydroxybenzoate decarboxylase subunit C
HBDC
1
IPR022391
22,391
Integrating conjugative element relaxase, PFGI-1 class
ICE_relaxase_PFGI-1
Domain
2,010
false
false
Proteins in this entry are the TraI putative relaxases required for transfer by a subclass of integrating conjugative elements (ICE) as found in Pseudomonas fluorescens Pf-5, and understood from study of two related ICE, SXT and R391. There is no homology detected to the similarly named TraI relaxase of the F plasmid. ...
[]
[]
[]
0
[ "NCBIFAM" ]
[ "TIGR03760" ]
[ "ICE_TraI_Pfluor" ]
[ 2010 ]
1
[ "GP" ]
[ "GenProp0855" ]
[ "GP:GenProp0855" ]
1
[]
0
[]
[]
[]
[]
0
[ "IPR011119" ]
[]
1
0
1
[ "Bacteria", "Eukaryota", "metagenomes" ]
[ 1986, 5, 19 ]
3
[]
[]
0
true
Domain
Integrating conjugative element relaxase, PFGI-1 class
Integrating conjugative element relaxase, PFGI-1 class
ICE_relaxase_PFGI-1
6
IPR022392
22,392
Anchored repeat-type ABC transporter, permease subunit
Anch_rpt-typ_ABC_trnsprt_perm
Family
481
false
false
This entry represents the permease subunit of a binding protein-dependent ABC transporter complex. The gene encoding this subunit is strictly associated with an adjacent gene encoding a sunbstrate binding protein containing the domain. Homologous permease subunits outside the scope of this family include manganese tran...
[]
[]
[]
0
[ "NCBIFAM" ]
[ "TIGR03770" ]
[ "anch_rpt_perm" ]
[ 481 ]
1
[ "GP" ]
[ "GenProp0857" ]
[ "GP:GenProp0857" ]
1
[]
0
[]
[]
[]
[]
0
[ "IPR001626" ]
[]
1
0
1
[ "Actinomycetota" ]
[ 481 ]
1
[]
[]
0
true
Family
Anchored repeat-type ABC transporter, permease subunit
Anchored repeat-type ABC transporter, permease subunit
Anch_rpt-typ_ABC_trnsprt_perm
4
IPR022393
22,393
Conjugative transposon, TraJ
Conjugative_transposon_TraJ
Family
2,256
false
false
Proteins in this entry are designated TraJ and are found in a proposed transfer region of a class of conjugative transposon found primarily in the Bacteroides lineage. They are related to conjugation system proteins in the Proteobacteria, including TrbL of Agrobacterium Ti plasmids and VirB6.
[]
[]
[]
0
[ "NCBIFAM" ]
[ "TIGR03782" ]
[ "Bac_Flav_CT_J" ]
[ 2256 ]
1
[ "GP" ]
[ "GenProp0858" ]
[ "GP:GenProp0858" ]
1
[]
0
[]
[]
[]
[]
0
[]
[]
0
0
null
[ "Bacteria", "metagenomes" ]
[ 2229, 27 ]
2
[]
[]
0
true
Family
Conjugative transposon, TraJ
Conjugative transposon, TraJ
Conjugative_transposon_TraJ
1
IPR022394
22,394
Methylamine utilisation protein, MauG
Methylamine_utilis_MauG
Family
25
false
false
This entry represents methylamine utilisation protein, MauG, as found in Methylobacterium extorquens and related species. This protein is involved in methylamine metabolism and is required to complete the maturation of the tryptophan tryptophylquinone (TTQ) cofactor in the methylamine dehydrogenase light (beta) chain [...
[ "GO:0005509", "GO:0016491", "GO:0020037", "GO:0030416" ]
[ "calcium ion binding", "oxidoreductase activity", "heme binding", "methylamine metabolic process" ]
[ "molecular_function", "molecular_function", "molecular_function", "biological_process" ]
4
[ "NCBIFAM" ]
[ "TIGR03791" ]
[ "TTQ_mauG" ]
[ 25 ]
1
[ "GP" ]
[ "GenProp0860" ]
[ "GP:GenProp0860" ]
1
[]
0
[ "PUB00060310", "PUB00060317" ]
[ "21128656", "19196017" ]
[ "The Tightly Bound Calcium of MauG Is Required for Tryptophan Tryptophylquinone Cofactor Biosynthesis.", "Kinetic mechanism for the initial steps in MauG-dependent tryptophan tryptophylquinone biosynthesis." ]
[ 2010, 2009 ]
2
[ "IPR026259" ]
[]
1
0
1
[ "Pseudomonadota" ]
[ 25 ]
1
[]
[]
0
true
Family
Methylamine utilisation protein, MauG
Methylamine utilisation protein, MauG
Methylamine_utilis_MauG
4
IPR022395
22,395
Conserved hypothetical protein CHP03773, ABC transporter-like
CHP03773_ABC_transptr-like
Family
365
false
false
Members of this protein family occur in genomes that contain a three-gene ABC transporter operon associated with the presence of domain . That domain occurs as a single-copy insert in the substrate-binding protein, and occurs in two or more copies in members of this protein family. Members of this family typically are ...
[]
[]
[]
0
[ "NCBIFAM" ]
[ "TIGR03773" ]
[ "anch_rpt_wall" ]
[ 365 ]
1
[ "GP" ]
[ "GenProp0857" ]
[ "GP:GenProp0857" ]
1
[]
0
[]
[]
[]
[]
0
[]
[]
0
0
null
[ "Actinomycetota" ]
[ 365 ]
1
[]
[]
0
true
Family
Conserved hypothetical protein CHP03773, ABC transporter-like
Conserved hypothetical protein CHP03773, ABC transporter-like
CHP03773_ABC_transptr-like
9
IPR022396
22,396
ParB-related, ThiF-related cassette, ParB
PRTRC_ParB
Family
333
false
false
A novel genetic system characterised by six major proteins, included a ParB homologue and a ThiF homologue, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. It is often found on plasmids. In this entry the members are related to ParB.
[]
[]
[]
0
[ "NCBIFAM" ]
[ "TIGR03734" ]
[ "PRTRC_parB" ]
[ 333 ]
1
[ "GP" ]
[ "GenProp0854" ]
[ "GP:GenProp0854" ]
1
[]
0
[]
[]
[]
[]
0
[]
[]
0
0
null
[ "Pseudomonadati", "Ricinus communis", "ecological metagenomes" ]
[ 328, 1, 4 ]
3
[]
[]
0
true
Family
ParB-related, ThiF-related cassette, ParB
ParB-related, ThiF-related cassette, ParB
PRTRC_ParB
1
IPR022397
22,397
Tyrosine decarboxylase, bacteria
Tyrosine_deCO2ase_bac
Family
270
false
false
Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [ , , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of a...
[]
[]
[]
0
[ "NCBIFAM" ]
[ "TIGR03811" ]
[ "tyr_de_CO2_Ent" ]
[ 270 ]
1
[ "EC", "EC", "METACYC", "METACYC", "METACYC", "METACYC", "METACYC", "METACYC", "METACYC", "METACYC", "METACYC", "METACYC", "METACYC", "METACYC", "METACYC", "METACYC", "METACYC", "METACYC", "METACYC", "METACYC", "METACYC", "METACYC", "METACYC", "METACYC", "METACYC", "...
[ "4.1.1.-", "4.1.1.25", "PWY-3385", "PWY-3542", "PWY-3581", "PWY-5113", "PWY-5163", "PWY-5254", "PWY-5474", "PWY-5706", "PWY-5826", "PWY-5870", "PWY-5871", "PWY-5872", "PWY-5873", "PWY-5956", "PWY-6055", "PWY-6133", "PWY-6262", "PWY-6309", "PWY-6322", "PWY-6340", "PWY-6627...
[ "EC:4.1.1.-", "EC:4.1.1.25", "METACYC:PWY-3385", "METACYC:PWY-3542", "METACYC:PWY-3581", "METACYC:PWY-5113", "METACYC:PWY-5163", "METACYC:PWY-5254", "METACYC:PWY-5474", "METACYC:PWY-5706", "METACYC:PWY-5826", "METACYC:PWY-5870", "METACYC:PWY-5871", "METACYC:PWY-5872", "METACYC:PWY-5873",...
51
[ "5hsi", "5hsj", "7cwx", "7cwy", "7cwz", "7cx0", "7cx1" ]
7
[ "PUB00001452", "PUB00002358", "PUB00003414", "PUB00004715", "PUB00006322", "PUB00035504", "PUB00035505", "PUB00035506", "PUB00035507", "PUB00035508", "PUB00053677", "PUB00076906", "PUB00094543" ]
[ "8181483", "8889823", "2124279", "2300558", "7748903", "15581583", "8690703", "15189147", "17109392", "16763894", "12089039", "24415726", "16766535" ]
[ "Multiple evolutionary origin of pyridoxal-5'-phosphate-dependent amino acid decarboxylases.", "Functionally important residues of aromatic L-amino acid decarboxylase probed by sequence alignment and site-directed mutagenesis.", "Prokaryotic and eukaryotic pyridoxal-dependent decarboxylases are homologous.", ...
[ 1994, 1996, 1990, 1990, 1995, 2005, 1995, 2004, 2006, 2006, 2002, 2014, 2006 ]
13
[]
[]
0
0
null
[ "Bacteria" ]
[ 270 ]
1
[]
[]
0
true
Family
Tyrosine decarboxylase, bacteria
Tyrosine decarboxylase, bacteria
Tyrosine_deCO2ase_bac
8
IPR022398
22,398
Peptidase S8, subtilisin, His-active site
Peptidase_S8_His-AS
Active_site
89,474
false
false
This entry represents the conserved sequence around the His active site of Subtilisin-like proteases. Subtilases [ ] are an extensive family of serine proteases belonging to the MEROPS peptidase family S8 (subtilisin, clan SB). Members of this family have a catalytic triad in the order Asp, His and Ser in the sequence,...
[]
[]
[]
0
[ "PROSITE" ]
[ "PS00137" ]
[ "SUBTILASE_HIS" ]
[ 89474 ]
1
[ "EC", "EC", "METACYC", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTO...
[ "3.4.21", "3.4.21.-", "PWY-7884", "R-CEL-1592389", "R-CEL-186797", "R-CEL-2173789", "R-CEL-2173796", "R-CEL-983168", "R-DDI-1369007", "R-DDI-159418", "R-DDI-193368", "R-DDI-382556", "R-DDI-9754706", "R-DDI-9757110", "R-DME-1592389", "R-DME-186797", "R-DME-2173789", "R-DME-2173796",...
[ "EC:3.4.21", "EC:3.4.21.-", "METACYC:PWY-7884", "REACTOME:R-CEL-1592389", "REACTOME:R-CEL-186797", "REACTOME:R-CEL-2173789", "REACTOME:R-CEL-2173796", "REACTOME:R-CEL-983168", "REACTOME:R-DDI-1369007", "REACTOME:R-DDI-159418", "REACTOME:R-DDI-193368", "REACTOME:R-DDI-382556", "REACTOME:R-DDI...
102
[ "1a2q", "1af4", "1ah2", "1ak9", "1aqn", "1au9", "1av7", "1avt", "1be6", "1be8", "1bfk", "1bfu", "1bh6", "1bjr", "1c3l", "1c9j", "1c9m", "1c9n", "1cnm", "1cse", "1dbi", "1dui", "1ea7", "1egq", "1gci", "1gns", "1gnv", "1ht3", "1iav", "1ic6", "1jea", "1lw6"...
509
[ "PUB00004957" ]
[ "1798697" ]
[ "Homology modelling and protein engineering strategy of subtilases, the family of subtilisin-like serine proteinases." ]
[ 1991 ]
1
[]
[]
0
0
null
[ "Archaea", "Bacteria", "Eukaryota", "Viruses", "unclassified sequences" ]
[ 1383, 47310, 40241, 39, 501 ]
5
[ "Arabidopsis thaliana", "Caenorhabditis elegans", "Danio rerio", "Drosophila melanogaster", "Homo sapiens", "Mus musculus", "Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)", "Oryza sativa subsp. japonica", "Rattus norvegicus", "Saccharomyces cerevisiae (strai...
[ 57, 5, 27, 13, 31, 32, 4, 20, 34, 4, 4, 10 ]
12
true
Active_site
Peptidase S8, subtilisin, His-active site
Peptidase S8, subtilisin, His-active site
Peptidase_S8_His-AS
4
IPR022399
22,399
TadA-like conjugal transfer-associated ATPase
TadA-like_ATPase
Family
3,943
false
false
This protein family represent a group of putative conjugal transfer-associated TadA-like ATPases associated with an integral membrane complex likely to act in pilus formation, secretion, or conjugal transfer [ , ].
[]
[]
[]
0
[ "NCBIFAM" ]
[ "TIGR03819" ]
[ "heli_sec_ATPase" ]
[ 3943 ]
1
[]
[]
[]
0
[]
0
[ "PUB00067502", "PUB00106782" ]
[ "11029439", "18554329" ]
[ "Nonspecific adherence by Actinobacillus actinomycetemcomitans requires genes widespread in bacteria and archaea.", "The specialized secretory apparatus ESX-1 is essential for DNA transfer in Mycobacterium smegmatis." ]
[ 2000, 2008 ]
2
[]
[]
0
0
null
[ "Bacteria", "Viridiplantae", "metagenomes" ]
[ 3919, 2, 22 ]
3
[]
[]
0
true
Family
TadA-like conjugal transfer-associated ATPase
TadA-like conjugal transfer-associated ATPase
TadA-like_ATPase
2
IPR022400
22,400
Adhesin P1
Adhesin_P1
Family
101
false
false
Members of this protein family are the major adhesin of the Mycoplasma terminal organelle. The protein is called adhesin P1 and is found in Mycoplasma genitalium, Mycoplasma pneumoniae and Mycoplasma gallisepticum. A conserved C-terminal region is shared by additional paralogs in M. pneumoniae and M. gallisepticum.
[]
[]
[]
0
[ "NCBIFAM" ]
[ "TIGR03839" ]
[ "termin_org_P1" ]
[ 101 ]
1
[]
[]
[]
0
[ "6rc9", "6rut", "6s3u", "6yrk", "7bwm", "8pbx", "8pby", "8pbz", "8pc0", "8pc1", "8ror" ]
11
[]
[]
[]
[]
0
[]
[]
0
0
null
[ "Mycoplasmoides" ]
[ 101 ]
1
[]
[]
0
true
Family
Adhesin P1
Adhesin P1
Adhesin_P1
9
IPR022401
22,401
Cysteate synthase
Cysteate_synthase
Family
301
false
false
This entry represents cysteate synthase, an enzyme of alternate pathway to sulphopyruvate, a precursor of coenzyme M [ ].
[ "GO:0016765" ]
[ "transferase activity, transferring alkyl or aryl (other than methyl) groups" ]
[ "molecular_function" ]
1
[ "HAMAP", "NCBIFAM" ]
[ "MF_02109", "TIGR03844" ]
[ "Cya_synthase", "cysteate_syn" ]
[ 71, 301 ]
2
[ "EC", "GP", "METACYC" ]
[ "2.5.1.76", "GenProp0893", "PWY-6643" ]
[ "EC:2.5.1.76", "GP:GenProp0893", "METACYC:PWY-6643" ]
3
[ "9k3c", "9k3o" ]
2
[ "PUB00053897" ]
[ "19761441" ]
[ "Convergent evolution of coenzyme M biosynthesis in the Methanosarcinales: cysteate synthase evolved from an ancestral threonine synthase." ]
[ 2009 ]
1
[]
[]
0
0
null
[ "Bacteria", "Methanobacteriati", "ecological metagenomes" ]
[ 162, 124, 15 ]
3
[]
[]
0
true
Family
Cysteate synthase
Cysteate synthase
Cysteate_synthase
3
IPR022402
22,402
F420-dependent oxidoreductase-predicted, MSMEG3544
F420_OxRdatse_MSMEG3544_pred
Family
406
false
false
Coenzyme F420 has a limited phylogenetic distribution, including methanogenic archaea, Mycobacterium tuberculosis and related species, Colwellia psychrerythraea 34H and Rhodopseudomonas palustris HaA2. Partial phylogenetic profiling identifies protein subfamilies, within the larger family called luciferase-like monooxy...
[]
[]
[]
0
[ "NCBIFAM" ]
[ "TIGR03854" ]
[ "F420_MSMEG_3544" ]
[ 406 ]
1
[ "GP" ]
[ "GenProp0002" ]
[ "GP:GenProp0002" ]
1
[]
0
[]
[]
[]
[]
0
[]
[]
0
0
null
[ "Actinomycetes", "freshwater metagenome" ]
[ 404, 2 ]
2
[]
[]
0
true
Family
F420-dependent oxidoreductase-predicted, MSMEG3544
F420-dependent oxidoreductase-predicted, MSMEG3544
F420_OxRdatse_MSMEG3544_pred
9
IPR022404
22,404
Diphtheria toxin, receptor-binding domain
Diphtheria_toxin_rcpt-bd_dom
Domain
28
false
false
This entry represents the C-terminal receptor-binding domain, also known as the R domain. This domain has a β-sandwich fold consisting of nine strands in two sheet with greek-key topology; it is a subclass of immunoglobin-like fold [ ]. The R domain binds to cell surface receptor, permitting the toxin to enter the cell...
[]
[]
[]
0
[ "PFAM" ]
[ "PF01324" ]
[ "Diphtheria_R" ]
[ 28 ]
1
[ "REACTOME" ]
[ "R-HSA-5336415" ]
[ "REACTOME:R-HSA-5336415" ]
1
[ "1ddt", "1f0l", "1mdt", "1sgk", "1tox", "1xdt", "4ae0", "4ae1", "4ow6", "5i82", "7k7b", "7k7c", "7k7d", "7k7e", "7o4w", "7rrw", "8g0f", "8g0g", "9biw" ]
19
[ "PUB00000429", "PUB00004122", "PUB00005016", "PUB00037609" ]
[ "8573568", "1589020", "7833808", "9012663" ]
[ "Crystal structure of diphtheria toxin bound to nicotinamide adenine dinucleotide.", "The crystal structure of diphtheria toxin.", "Refined structure of monomeric diphtheria toxin at 2.3 A resolution.", "Crystal structure of nucleotide-free diphtheria toxin." ]
[ 1996, 1992, 1994, 1997 ]
4
[]
[]
0
0
null
[ "Actinomycetes", "unclassified Lambdavirus" ]
[ 23, 5 ]
2
[]
[]
0
true
Domain
Diphtheria toxin, receptor-binding domain
Diphtheria toxin, receptor-binding domain
Diphtheria_toxin_rcpt-bd_dom
7
IPR022406
22,406
Diphtheria toxin, catalytic domain
Diphtheria_toxin_catalytic_dom
Domain
42
false
false
This entry represents the N-terminal catalytic domain (also known as the C domain). This domain has an unusual β+α fold [ ]. The C domain blocks protein synthesis by transfer of ADP-ribose from NAD to a diphthamide residue of EF-2 [ , ]. Diphtheria toxin ( ) is a 58kDa protein secreted by lysogenic strains of Corynebac...
[]
[]
[]
0
[ "PFAM" ]
[ "PF02763" ]
[ "Diphtheria_C" ]
[ 42 ]
1
[ "REACTOME" ]
[ "R-HSA-5336415" ]
[ "REACTOME:R-HSA-5336415" ]
1
[ "1ddt", "1dtp", "1f0l", "1mdt", "1sgk", "1tox", "1xdt", "4ae0", "4ae1", "4ow6", "5i82", "7k7b", "7k7c", "7k7d", "7k7e", "7o4w", "7rb4", "7rrw", "8g0f", "8g0g", "9biw" ]
21
[ "PUB00000429", "PUB00004122", "PUB00005016", "PUB00037609" ]
[ "8573568", "1589020", "7833808", "9012663" ]
[ "Crystal structure of diphtheria toxin bound to nicotinamide adenine dinucleotide.", "The crystal structure of diphtheria toxin.", "Refined structure of monomeric diphtheria toxin at 2.3 A resolution.", "Crystal structure of nucleotide-free diphtheria toxin." ]
[ 1996, 1992, 1994, 1997 ]
4
[]
[]
0
0
null
[ "Bacillati", "unclassified Lambdavirus" ]
[ 37, 5 ]
2
[]
[]
0
true
Domain
Diphtheria toxin, catalytic domain
Diphtheria toxin, catalytic domain
Diphtheria_toxin_catalytic_dom
5
IPR022407
22,407
Oxidoreductase, molybdopterin binding site
OxRdtase_Mopterin_BS
Binding_site
6,582
false
false
This entry represents a motif surrounding a cysteine residue that could be involved in binding the molybdopterin cofactor. A number of different eukaryotic oxidoreductases that require and bind a molybdopterin cofactor have been shown [ ] to share a few regions of sequence similarity. These enzymes include xanthine deh...
[ "GO:0043546" ]
[ "molybdopterin cofactor binding" ]
[ "molecular_function" ]
1
[ "PROSITE" ]
[ "PS00559" ]
[ "MOLYBDOPTERIN_EUK" ]
[ 6582 ]
1
[ "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME" ]
[ "R-DME-74259", "R-DME-964975", "R-DME-9748787", "R-GGA-421178", "R-HSA-1614517", "R-HSA-74259", "R-HSA-8851680", "R-HSA-964975", "R-HSA-9748787", "R-MMU-1614517", "R-MMU-74259", "R-MMU-8851680", "R-MMU-964975", "R-MMU-9748787", "R-RNO-1614517", "R-RNO-74259", "R-RNO-8851680", "R-RN...
[ "REACTOME:R-DME-74259", "REACTOME:R-DME-964975", "REACTOME:R-DME-9748787", "REACTOME:R-GGA-421178", "REACTOME:R-HSA-1614517", "REACTOME:R-HSA-74259", "REACTOME:R-HSA-8851680", "REACTOME:R-HSA-964975", "REACTOME:R-HSA-9748787", "REACTOME:R-MMU-1614517", "REACTOME:R-MMU-74259", "REACTOME:R-MMU-8...
19
[ "1fiq", "1fo4", "1n5x", "1v97", "1vdv", "1wyg", "2a9d", "2bih", "2bii", "2ckj", "2e1q", "2e3t", "3am9", "3amz", "3an1", "3ax7", "3ax9", "3b9j", "3bdj", "3etr", "3eub", "3nrz", "3ns1", "3nvv", "3nvw", "3nvy", "3nvz", "3sr6", "3una", "3unc", "3uni", "4uhw"...
50
[ "PUB00000608", "PUB00005356", "PUB00007725" ]
[ "2015248", "2204158", "9428520" ]
[ "Enzymes depending on the pterin molybdenum cofactor: sequence families, spectroscopic properties of molybdenum and possible cofactor-binding domains.", "Functional domains of assimilatory nitrate reductases and nitrite reductases.", "Molecular basis of sulfite oxidase deficiency from the structure of sulfite o...
[ 1991, 1990, 1997 ]
3
[]
[]
0
0
null
[ "Bacteria", "Eukaryota", "ecological metagenomes" ]
[ 177, 6396, 9 ]
3
[ "Arabidopsis thaliana", "Danio rerio", "Drosophila melanogaster", "Homo sapiens", "Mus musculus", "Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)", "Oryza sativa subsp. japonica", "Rattus norvegicus", "Zea mays" ]
[ 11, 1, 1, 8, 8, 1, 8, 12, 18 ]
9
true
Binding_site
Oxidoreductase, molybdopterin binding site
Oxidoreductase, molybdopterin binding site
OxRdtase_Mopterin_BS
6
IPR022408
22,408
Acyl-CoA-binding protein, ACBP, conserved site
Acyl-CoA-binding_prot_CS
Conserved_site
8,506
false
false
This entry represents a motif that corresponds to residue 19 to 37 in mammalian ACBP, adn which contains a conserved site. Acyl-CoA-binding protein (ACBP) is a small (10 Kd) protein that binds medium-and long-chain acyl-CoA esters with very high affinity and may function as an intracellular carrier of acyl-CoA esters [...
[]
[]
[]
0
[ "PROSITE" ]
[ "PS00880" ]
[ "ACB_1" ]
[ 8506 ]
1
[ "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOM...
[ "R-BTA-390918", "R-BTA-77289", "R-CEL-390918", "R-CFA-77289", "R-DDI-77289", "R-DRE-390918", "R-DRE-8980692", "R-DRE-9603798", "R-HSA-390247", "R-HSA-390918", "R-HSA-432722", "R-HSA-77289", "R-HSA-8980692", "R-HSA-9013106", "R-HSA-9033241", "R-HSA-9603798", "R-MMU-390247", "R-MMU-3...
[ "REACTOME:R-BTA-390918", "REACTOME:R-BTA-77289", "REACTOME:R-CEL-390918", "REACTOME:R-CFA-77289", "REACTOME:R-DDI-77289", "REACTOME:R-DRE-390918", "REACTOME:R-DRE-8980692", "REACTOME:R-DRE-9603798", "REACTOME:R-HSA-390247", "REACTOME:R-HSA-390918", "REACTOME:R-HSA-432722", "REACTOME:R-HSA-7728...
36
[ "1aca", "1hb6", "1hb8", "1nti", "1nvl", "1st7", "2abd", "2cb8", "2cqu", "2fdq", "2fj9", "2wh5", "3flv", "5h3g" ]
14
[ "PUB00000679", "PUB00003552", "PUB00003711", "PUB00004768", "PUB00021736", "PUB00035335" ]
[ "10354522", "1649940", "8898349", "1454809", "11491287", "16018771" ]
[ "Molecular cloning and expression of a novel human cDNA related to the diazepam binding inhibitor.", "Diazepam binding inhibitor (DBI): a peptide with multiple biological actions.", "A novel endozepine-like peptide (ELP) is exclusively expressed in male germ cells.", "Molecular cloning of the gene for the yea...
[ 1999, 1991, 1996, 1992, 2001, 2005 ]
6
[]
[]
0
0
null
[ "Bacteria", "Eukaryota", "Klosneuvirinae", "environmental samples", "metagenomes" ]
[ 519, 7971, 3, 3, 10 ]
5
[ "Caenorhabditis elegans", "Danio rerio", "Drosophila melanogaster", "Homo sapiens", "Mus musculus", "Oryza sativa subsp. japonica", "Rattus norvegicus", "Saccharomyces cerevisiae (strain ATCC 204508 / S288c)", "Zea mays" ]
[ 3, 30, 6, 43, 30, 2, 30, 1, 6 ]
9
true
Conserved_site
Acyl-CoA-binding protein, ACBP, conserved site
Acyl-CoA-binding protein, ACBP, conserved site
Acyl-CoA-binding_prot_CS
9
IPR022409
22,409
PKD/Chitinase domain
PKD/Chitinase_dom
Domain
42,792
false
false
The PKD (Polycystic Kidney Disease) domain was first identified in the Polycystic Kidney Disease protein, polycystin-1 (PDK1 gene), and contains an Ig-like fold consisting of a β-sandwich of seven strands in two sheets with a Greek key topology, although some members have additional strands [ ]. Polycystin-1 is a large...
[]
[]
[]
0
[ "SMART" ]
[ "SM00089" ]
[ "PKD" ]
[ 42792 ]
1
[ "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME" ]
[ "R-HSA-5620916", "R-HSA-8856825", "R-HSA-8856828", "R-HSA-8857538", "R-HSA-9824585", "R-MMU-5620916", "R-MMU-8856825", "R-MMU-8856828", "R-MMU-8857538", "R-RNO-8856825", "R-RNO-8856828", "R-RNO-8857538" ]
[ "REACTOME:R-HSA-5620916", "REACTOME:R-HSA-8856825", "REACTOME:R-HSA-8856828", "REACTOME:R-HSA-8857538", "REACTOME:R-HSA-9824585", "REACTOME:R-MMU-5620916", "REACTOME:R-MMU-8856825", "REACTOME:R-MMU-8856828", "REACTOME:R-MMU-8857538", "REACTOME:R-RNO-8856825", "REACTOME:R-RNO-8856828", "REACTOM...
12
[ "1b4r", "1ctn", "1edq", "1ehn", "1eib", "1ffq", "1ffr", "1k9t", "1l0q", "1nh6", "1rd6", "1wgo", "1x6l", "1x6n", "2c26", "2c4x", "2kzw", "2wk2", "2wly", "2wlz", "2wm0", "2y3u", "2y50", "2y6i", "2y72", "2yrl", "4aqo", "4jgu", "4jrw", "4l9d", "4tn9", "4u6t"...
49
[ "PUB00001323", "PUB00014157", "PUB00035973" ]
[ "9889186", "12377130", "11499680" ]
[ "The structure of a PKD domain from polycystin-1: implications for polycystic kidney disease.", "Archaeal surface layer proteins contain beta propeller, PKD, and beta helix domains and are related to metazoan cell surface proteins.", "The genes for the human VPS10 domain-containing receptors are large and conta...
[ 1999, 2002, 2001 ]
3
[]
[]
0
0
null
[ "Archaea", "Bacteria", "Eukaryota", "Viruses", "unclassified sequences" ]
[ 3545, 29129, 9399, 180, 539 ]
5
[ "Danio rerio", "Drosophila melanogaster", "Escherichia coli (strain K12)", "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]
[ 35, 2, 1, 47, 16, 22 ]
6
true
Domain
PKD/Chitinase domain
PKD/Chitinase domain
PKD/Chitinase_dom
1
IPR022410
22,410
ABC transporter, permease F420-0
ABC_transptr_permease_F420-0
Family
324
false
false
This small clade of ABC-type transporter permease protein components is found as a three gene cassette along with a periplasmic substrate-binding protein ( ) and an ATPase ( ). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was define...
[]
[]
[]
0
[ "NCBIFAM" ]
[ "TIGR03869" ]
[ "F420-0_ABCperm" ]
[ 324 ]
1
[ "GP" ]
[ "GenProp0896" ]
[ "GP:GenProp0896" ]
1
[]
0
[]
[]
[]
[]
0
[ "IPR000522" ]
[]
1
0
1
[ "Bacteria" ]
[ 324 ]
1
[]
[]
0
true
Family
ABC transporter, permease F420-0
ABC transporter, permease F420-0
ABC_transptr_permease_F420-0
6
IPR022411
22,411
C-type cytochrome, methanol metabolism-related
C-typ_cyt_methanol_metab-rel
Family
655
false
false
This entry represents a c-type cytochrome related to (but excluding) cytochrome c-555 of Methylococcus capsulatus. Members contain four invariant Cys residues, including two from a heme-binding motif shared with c-555, and two others.
[]
[]
[]
0
[ "NCBIFAM" ]
[ "TIGR03874" ]
[ "4cys_cytochr" ]
[ 655 ]
1
[ "GP" ]
[ "GenProp1101" ]
[ "GP:GenProp1101" ]
1
[ "6onq" ]
1
[]
[]
[]
[]
0
[]
[]
0
0
null
[ "Alphaproteobacteria", "ecological metagenomes" ]
[ 652, 3 ]
2
[]
[]
0
true
Family
C-type cytochrome, methanol metabolism-related
C-type cytochrome, methanol metabolism-related
C-typ_cyt_methanol_metab-rel
3
IPR022412
22,412
Quinolinate phosphoribosyl transferase, N-terminal
Quinolinate_PRibosylTrfase_N
Domain
27,328
false
false
Quinolinate phosphoribosyl transferase (QPRTase) or nicotinate-nucleotide pyrophosphorylase is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg 2+ to give rise to nicotinic acid mo...
[ "GO:0016763" ]
[ "pentosyltransferase activity" ]
[ "molecular_function" ]
1
[ "PFAM" ]
[ "PF02749" ]
[ "QRPTase_N" ]
[ 27328 ]
1
[ "EC", "METACYC", "METACYC", "METACYC", "METACYC", "METACYC", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME" ]
[ "2.4.2.19", "PWY-5316", "PWY-5653", "PWY-7342", "PWY-8277", "PWY-8352", "R-DDI-196807", "R-HSA-196807", "R-MMU-196807", "R-RNO-196807", "R-SCE-196807", "R-SSC-196807" ]
[ "EC:2.4.2.19", "METACYC:PWY-5316", "METACYC:PWY-5653", "METACYC:PWY-7342", "METACYC:PWY-8277", "METACYC:PWY-8352", "REACTOME:R-DDI-196807", "REACTOME:R-HSA-196807", "REACTOME:R-MMU-196807", "REACTOME:R-RNO-196807", "REACTOME:R-SCE-196807", "REACTOME:R-SSC-196807" ]
12
[ "1o4u", "1qap", "1qpn", "1qpo", "1qpq", "1qpr", "1x1o", "1ytd", "1yte", "1ytk", "2b7n", "2b7p", "2b7q", "2i14", "2i1o", "2jbm", "3c2e", "3c2f", "3c2o", "3c2r", "3c2v", "3gnn", "3l0g", "3paj", "3tqv", "4i9a", "4kwv", "4kww", "5ayx", "5ayy", "5ayz", "5hul"...
37
[ "PUB00000163", "PUB00005289" ]
[ "8561507", "9016724" ]
[ "The sequencing expression, purification, and steady-state kinetic analysis of quinolinate phosphoribosyl transferase from Escherichia coli.", "A new function for a common fold: the crystal structure of quinolinic acid phosphoribosyltransferase." ]
[ 1996, 1997 ]
2
[]
[]
0
0
null
[ "Archaea", "Bacteria", "Eukaryota", "unclassified sequences" ]
[ 1429, 22112, 3231, 556 ]
4
[ "Arabidopsis thaliana", "Escherichia coli (strain K12)", "Homo sapiens", "Mus musculus", "Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)", "Oryza sativa subsp. japonica", "Rattus norvegicus", "Saccharomyces cerevisiae (strain ATCC 204508 / S288c)", "Zea mays" ]
[ 6, 1, 2, 1, 2, 1, 11, 1, 4 ]
9
true
Domain
Quinolinate phosphoribosyl transferase, N-terminal
Quinolinate phosphoribosyl transferase, N-terminal
Quinolinate_PRibosylTrfase_N
3
IPR022413
22,413
ATP:guanido phosphotransferase, N-terminal
ATP-guanido_PTrfase_N
Domain
13,854
false
false
This entry represents the N-terminal domain of ATP:guanido phosphotransferase, which has an all-α fold consisting of an irregular array of 6 short helices [ ]. ATP:guanido phosphotransferases are a family of structurally and functionally related enzymes [ , ] that reversibly catalyse the transfer of phosphate between A...
[ "GO:0016301", "GO:0016772" ]
[ "kinase activity", "transferase activity, transferring phosphorus-containing groups" ]
[ "molecular_function", "molecular_function" ]
2
[ "PFAM", "PROFILE" ]
[ "PF02807", "PS51509" ]
[ "ATP-gua_PtransN", "PHOSPHAGEN_KINASE_N" ]
[ 11308, 13826 ]
2
[ "EC", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME" ]
[ "2.7.3", "R-BTA-71288", "R-BTA-9696264", "R-CFA-71288", "R-CFA-9696264", "R-GGA-71288", "R-GGA-9696264", "R-HSA-71288", "R-HSA-9696264", "R-MMU-71288", "R-MMU-9696264", "R-RNO-71288", "R-RNO-9696264", "R-SSC-71288" ]
[ "EC:2.7.3", "REACTOME:R-BTA-71288", "REACTOME:R-BTA-9696264", "REACTOME:R-CFA-71288", "REACTOME:R-CFA-9696264", "REACTOME:R-GGA-71288", "REACTOME:R-GGA-9696264", "REACTOME:R-HSA-71288", "REACTOME:R-HSA-9696264", "REACTOME:R-MMU-71288", "REACTOME:R-MMU-9696264", "REACTOME:R-RNO-71288", "REACT...
14
[ "1bg0", "1crk", "1g0w", "1i0e", "1m15", "1p50", "1p52", "1qh4", "1qk1", "1rl9", "1sd0", "1u6r", "1vrp", "2crk", "2j1q", "3b6r", "3drb", "3dre", "3jpz", "3jq3", "3ju5", "3ju6", "3l2d", "3l2e", "3m10", "4am1", "4bg4", "4bhl", "4gvy", "4gvz", "4gw0", "4gw2"...
66
[ "PUB00000040", "PUB00000670", "PUB00002616", "PUB00002619", "PUB00019172" ]
[ "3896131", "7819288", "2324092", "2324105", "8692275" ]
[ "The creatine-creatine phosphate energy shuttle.", "Isolation and sequence analysis of the gene for arginine kinase from the chelicerate arthropod, Limulus polyphemus: insights into catalytically important residues.", "A cloned ATP:guanidino kinase in the trematode Schistosoma mansoni has a novel duplicated str...
[ 1985, 1995, 1990, 1990, 1996 ]
5
[]
[]
0
0
null
[ "Bacteria", "Eukaryota", "ecological metagenomes" ]
[ 65, 13780, 9 ]
3
[ "Caenorhabditis elegans", "Danio rerio", "Drosophila melanogaster", "Homo sapiens", "Mus musculus", "Rattus norvegicus", "Zea mays" ]
[ 5, 19, 9, 30, 12, 17, 1 ]
7
true
Domain
ATP:guanido phosphotransferase, N-terminal
ATP:guanido phosphotransferase, N-terminal
ATP-guanido_PTrfase_N
8
IPR022414
22,414
ATP:guanido phosphotransferase, catalytic domain
ATP-guanido_PTrfase_cat
Domain
22,751
false
false
This entry represents the C-terminal catalytic domain of ATP:guanido phosphotransferase that consists of two similar subdomains, the common core of which comprises two β-α-β2-α repeats [ ]. The substrate binding site is located in the cleft between N and C-terminal subdomains, but most of the catalytic residues are fou...
[ "GO:0016301", "GO:0016772" ]
[ "kinase activity", "transferase activity, transferring phosphorus-containing groups" ]
[ "molecular_function", "molecular_function" ]
2
[ "PFAM", "PROFILE" ]
[ "PF00217", "PS51510" ]
[ "ATP-gua_Ptrans", "PHOSPHAGEN_KINASE_C" ]
[ 22232, 22507 ]
2
[ "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME" ]
[ "R-BTA-71288", "R-BTA-9696264", "R-CFA-71288", "R-CFA-9696264", "R-GGA-71288", "R-GGA-9696264", "R-HSA-71288", "R-HSA-9696264", "R-MMU-71288", "R-MMU-9696264", "R-RNO-71288", "R-RNO-9696264", "R-SSC-71288" ]
[ "REACTOME:R-BTA-71288", "REACTOME:R-BTA-9696264", "REACTOME:R-CFA-71288", "REACTOME:R-CFA-9696264", "REACTOME:R-GGA-71288", "REACTOME:R-GGA-9696264", "REACTOME:R-HSA-71288", "REACTOME:R-HSA-9696264", "REACTOME:R-MMU-71288", "REACTOME:R-MMU-9696264", "REACTOME:R-RNO-71288", "REACTOME:R-RNO-9696...
13
[ "1bg0", "1crk", "1g0w", "1i0e", "1m15", "1p50", "1p52", "1qh4", "1qk1", "1rl9", "1sd0", "1u6r", "1vrp", "2crk", "2j1q", "3b6r", "3drb", "3dre", "3jpz", "3jq3", "3ju5", "3ju6", "3l2d", "3l2e", "3m10", "4am1", "4bg4", "4bhl", "4gvy", "4gvz", "4gw0", "4gw2"...
73
[ "PUB00000040", "PUB00000670", "PUB00002616", "PUB00002619", "PUB00019172", "PUB00055520", "PUB00055521", "PUB00055522", "PUB00055523" ]
[ "3896131", "7819288", "2324092", "2324105", "8692275", "17932618", "18064398", "18499493", "20121101" ]
[ "The creatine-creatine phosphate energy shuttle.", "Isolation and sequence analysis of the gene for arginine kinase from the chelicerate arthropod, Limulus polyphemus: insights into catalytically important residues.", "A cloned ATP:guanidino kinase in the trematode Schistosoma mansoni has a novel duplicated str...
[ 1985, 1995, 1990, 1990, 1996, 2007, 2008, 2008, 2010 ]
9
[]
[]
0
0
null
[ "Archaea", "Bacteria", "Eukaryota", "metagenomes" ]
[ 3, 3442, 19233, 73 ]
4
[ "Caenorhabditis elegans", "Danio rerio", "Drosophila melanogaster", "Homo sapiens", "Mus musculus", "Rattus norvegicus", "Zea mays" ]
[ 6, 19, 9, 30, 10, 17, 1 ]
7
true
Domain
ATP:guanido phosphotransferase, catalytic domain
ATP:guanido phosphotransferase, catalytic domain
ATP-guanido_PTrfase_cat
6
IPR022415
22,415
ATP:guanido phosphotransferase active site
ATP-guanido_PTrfase_AS
Active_site
15,919
false
false
This entry represents the conserved region surrounding a cysteine residue in the C-terminal catalytic domain that is implicated in the catalytic activity of these enzymes. C-terminal catalytic domain of ATP:guanido phosphotransferase, which is comprised of a duplication where the common core consists of two β-α-β2-α re...
[ "GO:0016301", "GO:0016772" ]
[ "kinase activity", "transferase activity, transferring phosphorus-containing groups" ]
[ "molecular_function", "molecular_function" ]
2
[ "PROSITE" ]
[ "PS00112" ]
[ "PHOSPHAGEN_KINASE" ]
[ 15919 ]
1
[ "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME" ]
[ "R-BTA-71288", "R-BTA-9696264", "R-CFA-71288", "R-CFA-9696264", "R-GGA-71288", "R-GGA-9696264", "R-HSA-71288", "R-HSA-9696264", "R-MMU-71288", "R-MMU-9696264", "R-RNO-71288", "R-RNO-9696264", "R-SSC-71288" ]
[ "REACTOME:R-BTA-71288", "REACTOME:R-BTA-9696264", "REACTOME:R-CFA-71288", "REACTOME:R-CFA-9696264", "REACTOME:R-GGA-71288", "REACTOME:R-GGA-9696264", "REACTOME:R-HSA-71288", "REACTOME:R-HSA-9696264", "REACTOME:R-MMU-71288", "REACTOME:R-MMU-9696264", "REACTOME:R-RNO-71288", "REACTOME:R-RNO-9696...
13
[ "1bg0", "1crk", "1g0w", "1i0e", "1m15", "1p50", "1p52", "1qh4", "1qk1", "1rl9", "1u6r", "1vrp", "2crk", "2j1q", "3b6r", "3drb", "3dre", "3jpz", "3jq3", "3ju5", "3ju6", "3m10", "4am1", "4bg4", "4bhl", "4gvy", "4gvz", "4gw0", "4gw2", "4q2r", "4rf6", "4rf7"...
68
[ "PUB00000040", "PUB00000670", "PUB00002616", "PUB00002619", "PUB00019172" ]
[ "3896131", "7819288", "2324092", "2324105", "8692275" ]
[ "The creatine-creatine phosphate energy shuttle.", "Isolation and sequence analysis of the gene for arginine kinase from the chelicerate arthropod, Limulus polyphemus: insights into catalytically important residues.", "A cloned ATP:guanidino kinase in the trematode Schistosoma mansoni has a novel duplicated str...
[ 1985, 1995, 1990, 1990, 1996 ]
5
[]
[]
0
0
null
[ "Bacteria", "Eukaryota", "metagenomes" ]
[ 2493, 13385, 41 ]
3
[ "Caenorhabditis elegans", "Danio rerio", "Drosophila melanogaster", "Homo sapiens", "Mus musculus", "Rattus norvegicus", "Zea mays" ]
[ 2, 18, 8, 14, 8, 17, 1 ]
7
true
Active_site
ATP:guanido phosphotransferase active site
ATP:guanido phosphotransferase active site
ATP-guanido_PTrfase_AS
2
IPR022416
22,416
Prion/Doppel protein, beta-ribbon domain
Prion/Doppel_prot_b-ribbon_dom
Domain
1,777
false
false
This entry represents the C-terminal β-ribbon domain found in prion proteins [ ] and the prion-like Doppel proteins [ ]. This domain has a β-α-β-α(2) structure that contains an antiparallel β-ribbon. Prion protein (PrP-c) [ , , ] is a small glycoprotein found in high quantity in the brain of animals infected with certa...
[ "GO:0051260", "GO:0016020" ]
[ "protein homooligomerization", "membrane" ]
[ "biological_process", "cellular_component" ]
2
[ "PFAM", "PROSITE", "PROSITE" ]
[ "PF00377", "PS00291", "PS00706" ]
[ "Prion", "PRION_1", "PRION_2" ]
[ 1765, 1252, 1104 ]
3
[ "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME" ]
[ "R-GGA-163125", "R-GGA-9609523", "R-HSA-163125", "R-HSA-419037", "R-HSA-9609523", "R-MMU-163125", "R-MMU-9609523", "R-RNO-9609523", "R-SSC-9609523" ]
[ "REACTOME:R-GGA-163125", "REACTOME:R-GGA-9609523", "REACTOME:R-HSA-163125", "REACTOME:R-HSA-419037", "REACTOME:R-HSA-9609523", "REACTOME:R-MMU-163125", "REACTOME:R-MMU-9609523", "REACTOME:R-RNO-9609523", "REACTOME:R-SSC-9609523" ]
9
[ "1ag2", "1b10", "1dwy", "1dwz", "1dx0", "1dx1", "1e1g", "1e1j", "1e1p", "1e1s", "1e1u", "1e1w", "1fkc", "1fo7", "1g04", "1h0l", "1hjm", "1hjn", "1i17", "1i4m", "1lg4", "1m25", "1qlx", "1qlz", "1qm0", "1qm1", "1qm2", "1qm3", "1tpx", "1tqb", "1tqc", "1u3m"...
124
[ "PUB00000114", "PUB00001512", "PUB00005333", "PUB00009996", "PUB00025897", "PUB00027022" ]
[ "2572197", "1916104", "2908696", "12354606", "11524679", "12595265" ]
[ "Scrapie prions.", "Prions and prion proteins.", "The scrapie agent and the prion hypothesis.", "Prion diseases: pathogenesis and public health concerns.", "Crystal structure of the human prion protein reveals a mechanism for oligomerization.", "NMR structure of the human doppel protein." ]
[ 1989, 1991, 1988, 2002, 2001, 2003 ]
6
[]
[]
0
0
null
[ "Tetrapoda" ]
[ 1777 ]
1
[ "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]
[ 25, 12, 7 ]
3
true
Domain
Prion/Doppel protein, beta-ribbon domain
Prion/Doppel protein, beta-ribbon domain
Prion/Doppel_prot_b-ribbon_dom
7
IPR022417
22,417
Porphobilinogen deaminase, N-terminal
Porphobilin_deaminase_N
Domain
29,546
false
false
Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway [ ]. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin [ ]. The first stage in tetrapyrrole synthesi...
[ "GO:0004418", "GO:0033014" ]
[ "hydroxymethylbilane synthase activity", "tetrapyrrole biosynthetic process" ]
[ "molecular_function", "biological_process" ]
2
[ "PFAM" ]
[ "PF01379" ]
[ "Porphobil_deam" ]
[ 29546 ]
1
[ "EC", "METACYC", "METACYC", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME" ]
[ "2.5.1.61", "PWY-5188", "PWY-5189", "R-BTA-189451", "R-HSA-189451", "R-MMU-189451", "R-RNO-189451", "R-SCE-189451", "R-SPO-189451" ]
[ "EC:2.5.1.61", "METACYC:PWY-5188", "METACYC:PWY-5189", "REACTOME:R-BTA-189451", "REACTOME:R-HSA-189451", "REACTOME:R-MMU-189451", "REACTOME:R-RNO-189451", "REACTOME:R-SCE-189451", "REACTOME:R-SPO-189451" ]
9
[ "1ah5", "1gtk", "1pda", "1ypn", "2ypn", "3ecr", "3eq1", "4htg", "4mlq", "4mlv", "5h6o", "5m6r", "5m7f", "5ov4", "5ov5", "5ov6", "7aaj", "7aak", "7ccx", "7ccy", "7ccz", "7cd0", "8pnd" ]
23
[ "PUB00009744", "PUB00025374", "PUB00029805", "PUB00035496", "PUB00035498", "PUB00035502" ]
[ "11215515", "12555854", "1522882", "17227226", "16564539", "16935474" ]
[ "Biosynthesis of cobalamin (vitamin B12): a bacterial conundrum.", "Time-resolved and static-ensemble structural chemistry of hydroxymethylbilane synthase.", "Structure of porphobilinogen deaminase reveals a flexible multidomain polymerase with a single catalytic site.", "Tetrapyrrole biosynthesis in higher p...
[ 2000, 2003, 1992, 2007, 2006, 2006 ]
6
[]
[]
0
0
null
[ "Archaea", "Bacteria", "Eukaryota", "unclassified sequences" ]
[ 761, 22631, 5774, 380 ]
4
[ "Arabidopsis thaliana", "Danio rerio", "Drosophila melanogaster", "Escherichia coli (strain K12)", "Homo sapiens", "Mus musculus", "Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)", "Oryza sativa subsp. japonica", "Rattus norvegicus", "Saccharomyces cerevisiae...
[ 4, 4, 2, 1, 12, 6, 1, 2, 9, 1, 1, 13 ]
12
true
Domain
Porphobilinogen deaminase, N-terminal
Porphobilinogen deaminase, N-terminal
Porphobilin_deaminase_N
2
IPR022418
22,418
Porphobilinogen deaminase, C-terminal
Porphobilinogen_deaminase_C
Domain
28,084
false
false
Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway [ ]. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin [ ]. The first stage in tetrapyrrole synthesi...
[ "GO:0004418", "GO:0033014" ]
[ "hydroxymethylbilane synthase activity", "tetrapyrrole biosynthetic process" ]
[ "molecular_function", "biological_process" ]
2
[ "PFAM" ]
[ "PF03900" ]
[ "Porphobil_deamC" ]
[ 28084 ]
1
[ "EC", "METACYC", "METACYC", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME" ]
[ "2.5.1.61", "PWY-5188", "PWY-5189", "R-BTA-189451", "R-HSA-189451", "R-MMU-189451", "R-RNO-189451", "R-SCE-189451", "R-SPO-189451" ]
[ "EC:2.5.1.61", "METACYC:PWY-5188", "METACYC:PWY-5189", "REACTOME:R-BTA-189451", "REACTOME:R-HSA-189451", "REACTOME:R-MMU-189451", "REACTOME:R-RNO-189451", "REACTOME:R-SCE-189451", "REACTOME:R-SPO-189451" ]
9
[ "1ah5", "1gtk", "1pda", "1ypn", "2ypn", "3ecr", "3eq1", "4htg", "4mlq", "4mlv", "5h6o", "5m6r", "5m7f", "5ov4", "5ov5", "5ov6", "7aaj", "7aak", "7ccx", "7ccy", "7ccz", "7cd0", "8pnd" ]
23
[ "PUB00009744", "PUB00025374", "PUB00029805", "PUB00035496", "PUB00035498", "PUB00035502" ]
[ "11215515", "12555854", "1522882", "17227226", "16564539", "16935474" ]
[ "Biosynthesis of cobalamin (vitamin B12): a bacterial conundrum.", "Time-resolved and static-ensemble structural chemistry of hydroxymethylbilane synthase.", "Structure of porphobilinogen deaminase reveals a flexible multidomain polymerase with a single catalytic site.", "Tetrapyrrole biosynthesis in higher p...
[ 2000, 2003, 1992, 2007, 2006, 2006 ]
6
[]
[]
0
0
null
[ "Archaea", "Bacteria", "Eukaryota", "unclassified sequences" ]
[ 714, 21731, 5341, 298 ]
4
[ "Arabidopsis thaliana", "Danio rerio", "Drosophila melanogaster", "Escherichia coli (strain K12)", "Homo sapiens", "Mus musculus", "Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)", "Oryza sativa subsp. japonica", "Rattus norvegicus", "Saccharomyces cerevisiae...
[ 4, 4, 2, 1, 7, 5, 1, 2, 7, 1, 1, 11 ]
12
true
Domain
Porphobilinogen deaminase, C-terminal
Porphobilinogen deaminase, C-terminal
Porphobilinogen_deaminase_C
7
IPR022419
22,419
Porphobilinogen deaminase, dipyrromethane cofactor binding site
Porphobilin_deaminase_cofac_BS
Binding_site
25,292
false
false
This entry represents the region around a cysteine residues that is conserved in porphobilinogen deaminases from various prokaryotic and eukaryotic sources. The sulphur atom of this cysteine residue has been shown in the Escherichia coli enzyme (gene hemC) to be bound to the dipyrromethane cofactor [ ]. Porphobilinogen...
[ "GO:0004418", "GO:0018160", "GO:0033014" ]
[ "hydroxymethylbilane synthase activity", "peptidyl-pyrromethane cofactor linkage", "tetrapyrrole biosynthetic process" ]
[ "molecular_function", "biological_process", "biological_process" ]
3
[ "PROSITE" ]
[ "PS00533" ]
[ "PORPHOBILINOGEN_DEAM" ]
[ 25292 ]
1
[ "EC", "METACYC", "METACYC", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME" ]
[ "2.5.1.61", "PWY-5188", "PWY-5189", "R-BTA-189451", "R-HSA-189451", "R-MMU-189451", "R-RNO-189451", "R-SCE-189451", "R-SPO-189451" ]
[ "EC:2.5.1.61", "METACYC:PWY-5188", "METACYC:PWY-5189", "REACTOME:R-BTA-189451", "REACTOME:R-HSA-189451", "REACTOME:R-MMU-189451", "REACTOME:R-RNO-189451", "REACTOME:R-SCE-189451", "REACTOME:R-SPO-189451" ]
9
[ "1ah5", "1gtk", "1pda", "1ypn", "2ypn", "3ecr", "3eq1", "4htg", "4mlq", "4mlv", "5h6o", "5m6r", "5m7f", "5ov4", "5ov5", "5ov6", "7aaj", "7aak", "7ccx", "7ccy", "7ccz", "7cd0", "8pnd" ]
23
[ "PUB00000469", "PUB00029805" ]
[ "3196304", "1522882" ]
[ "Evidence that the pyrromethane cofactor of hydroxymethylbilane synthase (porphobilinogen deaminase) is bound to the protein through the sulphur atom of cysteine-242.", "Structure of porphobilinogen deaminase reveals a flexible multidomain polymerase with a single catalytic site." ]
[ 1988, 1992 ]
2
[]
[]
0
0
null
[ "Archaea", "Bacteria", "Eukaryota", "unclassified sequences" ]
[ 541, 19772, 4767, 212 ]
4
[ "Arabidopsis thaliana", "Danio rerio", "Drosophila melanogaster", "Escherichia coli (strain K12)", "Homo sapiens", "Mus musculus", "Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)", "Oryza sativa subsp. japonica", "Rattus norvegicus", "Saccharomyces cerevisiae...
[ 4, 4, 2, 1, 7, 5, 1, 2, 7, 1, 1, 11 ]
12
true
Binding_site
Porphobilinogen deaminase, dipyrromethane cofactor binding site
Porphobilinogen deaminase, dipyrromethane cofactor binding site
Porphobilin_deaminase_cofac_BS
4
IPR022420
22,420
Circadian clock protein, KaiC, methanobacteria
Circ_KaiC_methanobact
Family
329
false
false
This entry represents a rather narrowly distributed methanobacterial protein family in which members have a single copy of the KaiC domain. This stands in contrast to the circadian clock protein KaiC itself, with two copies of the domain. Members are expected to have weak ATPase activity, by homology to the autokinase/...
[]
[]
[]
0
[ "NCBIFAM" ]
[ "TIGR03880" ]
[ "KaiC_arch_3" ]
[ 329 ]
1
[]
[]
[]
0
[]
0
[]
[]
[]
[]
0
[]
[]
0
0
null
[ "Methanobacteriati", "ecological metagenomes" ]
[ 327, 2 ]
2
[]
[]
0
true
Family
Circadian clock protein, KaiC, methanobacteria
Circadian clock protein, KaiC, methanobacteria
Circ_KaiC_methanobact
1
IPR022421
22,421
Relaxin
Relaxin
Family
208
false
false
The insulin/IGF/relaxin superfamily is an ancient family of functionally diverse proteins [ ]. The 3D structures of a number of family members have been determined [ , , ]. The fold comprises two polypeptide chains (A and B) linked by two disulphide bonds: all share a conserved arrangement of four cysteines in their A ...
[ "GO:0005179", "GO:0005576" ]
[ "hormone activity", "extracellular region" ]
[ "molecular_function", "cellular_component" ]
2
[ "PRINTS" ]
[ "PR02004" ]
[ "RELAXIN" ]
[ 208 ]
1
[ "REACTOME", "REACTOME", "REACTOME", "REACTOME", "REACTOME" ]
[ "R-HSA-418555", "R-HSA-444821", "R-MMU-418555", "R-MMU-444821", "R-RNO-444821" ]
[ "REACTOME:R-HSA-418555", "REACTOME:R-HSA-444821", "REACTOME:R-MMU-418555", "REACTOME:R-MMU-444821", "REACTOME:R-RNO-444821" ]
5
[]
0
[ "PUB00003970", "PUB00003972", "PUB00003973", "PUB00023078", "PUB00037375", "PUB00053639", "PUB00053640", "PUB00053641", "PUB00053642", "PUB00053683", "PUB00096674" ]
[ "503234", "6243748", "6107857", "2036417", "9141131", "10601981", "8735594", "8683595", "1319992", "6298628", "30747102" ]
[ "Nucleotide sequence of a cDNA clone encoding human preproinsulin.", "Sequence of the human insulin gene.", "Hormone families: pancreatic hormones and homologous growth factors.", "Solution structure of human insulin-like growth factor 1: a nuclear magnetic resonance and restrained molecular dynamics study.",...
[ 1979, 1980, 1980, 1991, 1997, 1999, 1996, 1996, 1992, 1983, 2019 ]
11
[]
[ "IPR023258" ]
0
1
0
[ "Theria" ]
[ 208 ]
1
[ "Homo sapiens", "Mus musculus", "Rattus norvegicus" ]
[ 3, 5, 3 ]
3
true
Family
Relaxin
Relaxin
Relaxin
4