sha256 stringlengths 64 64 | language stringclasses 27
values | size int32 1 491k | lines int32 1 21.8k | content stringlengths 1 200k |
|---|---|---|---|---|
e95592f3524f55705bcd185afdfd22c5cc9924d5ab0613a64bb369e3bc34f7f9 | C++ | 1,906 | 48 | //=====================================================
// File : main.cpp
// Author : L. Plagne <laurent.plagne@edf.fr)>
// Copyright (C) EDF R&D, lun sep 30 14:23:23 CEST 2002
//=====================================================
//
// This program is free software; you can redistribute it and/or
// modify it ... |
6cfb4821d8cb1c77fbb5af4f8aec569948762d8ea314827e3ead967b5b6a223e | C++ | 1,909 | 45 | // Copyright 2005, Google Inc.
// All rights reserved.
//
// Redistribution and use in source and binary forms, with or without
// modification, are permitted provided that the following conditions are
// met:
//
// * Redistributions of source code must retain the above copyright
// notice, this list of conditions ... |
d722f4496ca243451f02460117c4680a213915231bc0651236da9f64ca0c4ae3 | C++ | 1,909 | 60 | //---------------------------------------------------------------------------//
// Copyright (c) 2014 Roshan <thisisroshansmail@gmail.com>
//
// Distributed under the Boost Software License, Version 1.0
// See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt
//
// See http://boostorg... |
12477b8555c6d05be7e9c1d2d0c9398387972530ea6c93ad4c9baf60d8bb6bdc | C++ | 1,919 | 61 | //---------------------------------------------------------------------------//
// Copyright (c) 2014 Roshan <thisisroshansmail@gmail.com>
//
// Distributed under the Boost Software License, Version 1.0
// See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt
//
// See http://boostorg... |
0b6a9d4983480f87352ca4da946089264b401f7a4a3b1282253fd6cc861bf483 | C++ | 1,921 | 43 | // Copyright 2008, Google Inc.
// All rights reserved.
//
// Redistribution and use in source and binary forms, with or without
// modification, are permitted provided that the following conditions are
// met:
//
// * Redistributions of source code must retain the above copyright
// notice, this list of conditions ... |
e83d7e5dd81150d123adeb09f7ad78839e5f2cdf9897e433faeeb4b4f3169238 | C++ | 1,922 | 57 | #include "IncludeDefine.h"
#include "Parameters.h"
#include "Transcript.h"
#include "ReadAlign.h"
#include "BAMfunctions.h"
#include "blocksOverlap.h"
//#include "SequenceFuns.h"
//#include "stitchWindowAligns.h"
//#include "sjSplitAlign.cpp"
//#include "PackedArray.h"
//#include "alignSpliceGraph.h"
//#include "Globa... |
f685a456665f8f3f6e6b56b149d11d76c00de9157352b7f60da8b8f3542046b4 | C++ | 1,925 | 62 | #include "ParametersClip.h"
#include "Parameters.h"
#include "SequenceFuns.h"
inline char* findChar(char *arr, char c);
void ClipMate::clipChunk(char *chArr, uint64 chSize)
{//clipping adapters from a chunk of reads
if (type != 10) //type=10 for CellRanger4 5' clipping.
return;
char *chA1 = chArr... |
8c5acb00cb6b11ef68f9ada1096bd6e71e77f47cdc94196f7a2d1ab8aceebcec | C++ | 1,926 | 61 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// Eigen is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
// License as published by the Free Soft... |
b4260f5fa35d78ac114a9abb59fce12403faf0273df41f57e83c341ae7979222 | C++ | 1,927 | 46 | // Copyright 2005, Google Inc.
// All rights reserved.
//
// Redistribution and use in source and binary forms, with or without
// modification, are permitted provided that the following conditions are
// met:
//
// * Redistributions of source code must retain the above copyright
// notice, this list of conditions ... |
286dacad8d6821da726783d33103817159fcb3405331d9ff8912034c298b16d9 | C++ | 1,928 | 54 | #include "socket_utils.h"
#include "api_config.h"
#include "common.h"
#include <boost/endian/conversion.hpp>
double lsl::measure_endian_performance() {
const double measure_duration = 0.01;
const double t_end = lsl_clock() + measure_duration;
uint64_t data = 0x01020304;
double k;
for (k = 0; ((int)k & 0xFF) != 0 ... |
65f2900ab908133b7eeeb81bc7e9c9d38ca0ca5f2b6c8f9f738dee7060a6b273 | C++ | 1,928 | 68 | //---------------------------------------------------------------------------//
// Copyright (c) 2013 Kyle Lutz <kyle.r.lutz@gmail.com>
//
// Distributed under the Boost Software License, Version 1.0
// See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt
//
// See http://boostorg.gi... |
39dc28d3e5608307336d3cee7515a6b3a86d7280f658bdc7daa640f50b2f3764 | C++ | 1,930 | 46 | //=====================================================
// Copyright (C) 2008 Gael Guennebaud <g.gael@free.fr>
//=====================================================
//
// This program is free software; you can redistribute it and/or
// modify it under the terms of the GNU General Public License
// as published by the... |
c444be739eeb2a20819b8b39ee55be8ec5cf96e6357cc20035fa0821b1b06357 | C++ | 1,930 | 61 | // Copyright 2015 Vicente J. Botet Escriba
// Distributed under the Boost Software License, Version 1.0.
// See http://www.boost.org/LICENSE_1_0.txt
// See http://www.boost.org/libs/chrono for documentation.
#define BOOST_CHRONO_VERION 2
#include <iostream>
#include <boost/chrono/chrono.hpp>
#include <boost/chrono... |
8755d22002c150bc9beec0bf095d86d56772435169cfe0ba8adacb37140e1b58 | C++ | 1,931 | 60 | //---------------------------------------------------------------------------//
// Copyright (c) 2014 Roshan <thisisroshansmail@gmail.com>
//
// Distributed under the Boost Software License, Version 1.0
// See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt
//
// See http://boostorg... |
6ee7dfc4171d947dc1d2cd485c4994b31ddd1f0bf7928932a59c902bc794cf83 | C++ | 1,938 | 58 | //---------------------------------------------------------------------------//
// Copyright (c) 2013 Kyle Lutz <kyle.r.lutz@gmail.com>
//
// Distributed under the Boost Software License, Version 1.0
// See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt
//
// See http://boostorg.gi... |
7704b9fa1d1a62e43980a3c501651dc2e1f58c4904ce5f990ec1a775193b83b3 | C++ | 1,941 | 60 | //---------------------------------------------------------------------------//
// Copyright (c) 2014 Roshan <thisisroshansmail@gmail.com>
//
// Distributed under the Boost Software License, Version 1.0
// See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt
//
// See http://boostorg... |
7bdda66b9b1d7dd16a5994d96e7572afb3a09471a0255f2d94523929f404f265 | C++ | 1,942 | 59 | #include "send_buffer.h"
#include "consumer_queue.h"
#include <loguru.hpp>
#include <memory>
using namespace lsl;
std::shared_ptr<consumer_queue> send_buffer::new_consumer(int max_buffered) {
max_buffered = max_buffered ? std::min(max_buffered, max_capacity_) : max_capacity_;
return std::make_shared<consumer_queue>... |
afa3e7977a24ce2e3edaad200ebba28549834abb1022cb62ca42fd2c915d617d | C++ | 1,943 | 46 | //=====================================================
// Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
//=====================================================
//
// This program is free software; you can redistribute it and/or
// modify it under the terms of the GNU General Public License
// as publis... |
9dfa10585d6b4bd4aa608a1cd440e09332b66850470f6b366a8fea9362780ae4 | C++ | 1,947 | 49 | #include <iostream>
#include <lsl_cpp.h>
int main(int argc, char *argv[]) {
try {
// create a new stream_info and declare some meta-data (in accordance with XDF format)
const char *name = argc > 1 ? argv[1] : "MetaTester";
lsl::stream_info info(name, "EEG", 8, 100, lsl::cf_float32, "myuid323457");
lsl::xml_el... |
65f856a0220241255acea46acc940d577e69e3865c4baf7e099f5e866a739dbb | C++ | 1,953 | 70 | //---------------------------------------------------------------------------//
// Copyright (c) 2013-2014 Kyle Lutz <kyle.r.lutz@gmail.com>
//
// Distributed under the Boost Software License, Version 1.0
// See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt
//
// See http://boosto... |
bff0a093abe83fa95f6cd31ac1d869ed659ec5804634b67946f710edf008a65b | C++ | 1,954 | 78 | //
// Copyright (c) 2016-2019 Vinnie Falco (vinnie dot falco at gmail dot com)
//
// Distributed under the Boost Software License, Version 1.0. (See accompanying
// file LICENSE_1_0.txt or copy at http://www.boost.org/LICENSE_1_0.txt)
//
// Official repository: https://github.com/boostorg/beast
//
#include <boost/beas... |
9a0f57e6ccf4f96fea54c6804f3514523220928d1e3da63d2cf9f3c27b94a3e4 | C++ | 1,956 | 73 | // await_keystroke.cpp -----------------------------------------------------//
// Copyright Beman Dawes 2008
// Distributed under the Boost Software License, Version 1.0.
// See http://www.boost.org/LICENSE_1_0.txt
#define _CRT_SECURE_NO_WARNINGS
#include <boost/chrono/chrono.hpp>
#include <iostream>
#include ... |
56e7dd5d27df7d13ebdda83b4fe351104eb63683460e7f766d8cbbece054e4bd | C++ | 1,957 | 62 | //---------------------------------------------------------------------------//
// Copyright (c) 2014 Roshan <thisisroshansmail@gmail.com>
//
// Distributed under the Boost Software License, Version 1.0
// See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt
//
// See http://boostorg... |
f82ded7464a6c7baec45b046ef473e6e6c6ac67094fd0715ce6ebda9bba546ff | C++ | 1,957 | 61 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra. Eigen itself is part of the KDE project.
//
// Copyright (C) 2008 Gael Guennebaud <g.gael@free.fr>
//
// Eigen is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
// Licens... |
946ec606f225be27281f318089a0ed67f5f3bb2c2fb91256b1f0fdd751434cc8 | C++ | 1,959 | 107 | #include "node.h"
#include "exceptions.h"
#include "iterpriv.h"
namespace YAML
{
Iterator::Iterator(): m_pData(0)
{
m_pData = new IterPriv;
}
Iterator::Iterator(IterPriv *pData): m_pData(pData)
{
}
Iterator::Iterator(const Iterator& rhs): m_pData(0)
{
m_pData = new IterPriv(*rhs.m_pData);
}
Iterator& ... |
d864f14171e283a670655a2221df0a50a9d8c068c61e7ba78e25412a97958aea | C++ | 1,961 | 96 | /**
* Copyright (c) 2016-present, Facebook, Inc.
* All rights reserved.
*
* This source code is licensed under the MIT license found in the
* LICENSE file in the root directory of this source tree.
*/
#include "vector.h"
#include <assert.h>
#include <cmath>
#include <iomanip>
#include "matrix.h"
namespace fa... |
523aaa6d01c457a72fe51315478f8b3b43dcf3678dbcade958539b8969202a8e | C++ | 1,962 | 51 | //=====================================================
// File : main.cpp
// Author : L. Plagne <laurent.plagne@edf.fr)>
// Copyright (C) EDF R&D, lun sep 30 14:23:30 CEST 2002
//=====================================================
//
// This program is free software; you can redistribute it and/or
// modify it ... |
574671362de78f125d2225341faee450593b1cdfa268fb1d0d3f10455a0119f2 | C++ | 1,964 | 61 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra. Eigen itself is part of the KDE project.
//
// Copyright (C) 2008 Gael Guennebaud <g.gael@free.fr>
//
// Eigen is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
// Licens... |
d1f4481247a7122a0675d940344b2cf8b43d8cebad599554cc4965a45522ed58 | C++ | 1,972 | 71 | //
// echo_server_with_as_tuple_default.cpp
// ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
//
// Copyright (c) 2003-2022 Christopher M. Kohlhoff (chris at kohlhoff dot com)
//
// Distributed under the Boost Software License, Version 1.0. (See accompanying
// file LICENSE_1_0.txt or copy at http://www.boost.org/LICENSE_1_0.tx... |
bfb5665d20f620e215fd46eaeb6457d91cd2f4ffe0c281b8ef1085a3ea0b66cb | C++ | 1,974 | 46 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra. Eigen itself is part of the KDE project.
//
// Copyright (C) 2008 Gael Guennebaud <g.gael@free.fr>
//
// Eigen is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
// Licens... |
cffb0ce5535117d44290b25a63aec8b650ec37f66786ddba5e229c0d088c3fba | C++ | 1,975 | 59 | #include "IncludeDefine.h"
#include "Parameters.h"
int stitchGapIndel (uint rAend, uint gAend, uint rBstart, uint gBstart, uint L, uint gapStart, uint gapEnd, char* R, char* G, Parameters& P,\
uint &iRbest, uint &nMM){//returns stitch score
uint gapLength = gapEnd-gapStart+1;
sint inDel= (... |
48419031592ddc43004a4ce8c3418c8b6f47c09728d6a5131daf10f9f204561c | C++ | 1,977 | 68 | //---------------------------------------------------------------------------//
// Copyright (c) 2013 Kyle Lutz <kyle.r.lutz@gmail.com>
//
// Distributed under the Boost Software License, Version 1.0
// See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt
//
// See http://boostorg.gi... |
bb842cb106418aeb05018b40be39150336ddee953564bb6c8e22ae8753d8a1d0 | C++ | 1,981 | 61 | #include "send_buffer.h"
#include "consumer_queue.h"
#include <algorithm>
#include <chrono>
#include <loguru.hpp>
#include <memory>
using namespace lsl;
std::shared_ptr<consumer_queue> send_buffer::new_consumer(int max_buffered) {
max_buffered = max_buffered ? std::min(max_buffered, max_capacity_) : max_capacity_;
... |
ebb262984af210430798411a9b135b7fc52702c42dbabceeea3293b247e75d45 | C++ | 1,981 | 54 | // Copyright (c) 2020 Andrey Semashev
//
// Distributed under the Boost Software License, Version 1.0.
// See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt)
#include <boost/atomic/ipc_atomic.hpp>
#include <boost/atomic/ipc_atomic_flag.hpp>
#include <boost/atomic/capabilities.... |
8132da88c6fe520c1b11200fae2e857867ac0c00ea7acd4923b50d7a8a1db52c | C++ | 1,991 | 63 | #include "SoloReadFeature.h"
#include "streamFuns.h"
#include "SoloFeatureTypes.h"
SoloReadFeature::SoloReadFeature(int32 feTy, Parameters &Pin, int iChunk)
: featureType(feTy), P(Pin), pSolo(P.pSolo)
{
if (pSolo.type==0)
return;
// if (pSolo.type==pSolo.SoloTypes::CB_samTagOut)
// ... |
892f7bb7f34c1e3a4c7622abf7e27a8f009f8de5b6969537ce220e1358764d8b | C++ | 1,992 | 49 | #include <iostream>
#include <lsl_cpp.h>
int main(int argc, char* argv[]) {
try {
// create a new stream_info and declare some meta-data (in accordance with XDF format)
const char* name = argc > 1 ? argv[1] : "MetaTester";
lsl::stream_info info(name, "EEG", 8, 100, lsl::cf_float32, "myuid323457");
lsl::xml_el... |
8852a26229247c5e8e44fe8e59f13a742a28af73d94af67e6b9c28c1eee77c1b | C++ | 1,998 | 76 | //
// connect_pair.cpp
// ~~~~~~~~~~~~~~~~
//
// Copyright (c) 2003-2022 Christopher M. Kohlhoff (chris at kohlhoff dot com)
//
// Distributed under the Boost Software License, Version 1.0. (See accompanying
// file LICENSE_1_0.txt or copy at http://www.boost.org/LICENSE_1_0.txt)
//
// Disable autolinking for unit tes... |
fd824747255dc27dee1d4583da014150b07b5ae2d2eb4d030d96e75d6f971675 | C++ | 1,998 | 63 | //---------------------------------------------------------------------------//
// Copyright (c) 2014 Roshan <thisisroshansmail@gmail.com>
//
// Distributed under the Boost Software License, Version 1.0
// See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt
//
// See http://boostorg... |
bc014526455ac23fd222297f9ee37356ead6612c9b79ed0668aa45cf69a0b796 | C++ | 2,000 | 77 | // (C) Copyright Eric Niebler 2005.
// Use, modification and distribution are subject to the
// Boost Software License, Version 1.0. (See accompanying file
// LICENSE_1_0.txt or copy at http://www.boost.org/LICENSE_1_0.txt)
#include <boost/test/unit_test.hpp>
#include <boost/accumulators/accumulators.hpp>
#include... |
16f969ed718629eea9b17d545915ed0301f1ac1bede1aefe3a697c53af9d0c3d | C++ | 2,004 | 46 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra. Eigen itself is part of the KDE project.
//
// Copyright (C) 2008 Gael Guennebaud <g.gael@free.fr>
//
// Eigen is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
// Licens... |
1ca1248dca0de339ff154d014105ff82fc61e31348e39428453a85a3cd97970a | C++ | 2,004 | 71 | //
// echo_server_with_as_single_default.cpp
// ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
//
// Copyright (c) 2003-2022 Christopher M. Kohlhoff (chris at kohlhoff dot com)
//
// Distributed under the Boost Software License, Version 1.0. (See accompanying
// file LICENSE_1_0.txt or copy at http://www.boost.org/LICENSE_1_0.... |
f7a343e9e50557c9d2c2fa8402e160e31c0b6a115875939aa66394764e06f927 | C++ | 2,006 | 61 | #include <algorithm>
#include <chrono>
#include <iostream>
#include <lsl_cpp.h>
#include <map>
#include <thread>
/**
* This example program shows how all streams that are currently present on the lab network can be
* resolved and displayed. This is useful for browsing applications.
*/
int main(int argc, char* argv... |
f808ec2779bfaf29519ec91baa1c22c0c8aa16411996946e42ece50028247ce9 | C++ | 2,006 | 61 | #include <algorithm>
#include <chrono>
#include <iostream>
#include <lsl_cpp.h>
#include <map>
#include <thread>
/**
* This example program shows how all streams that are currently present on the lab network can be
* resolved and displayed. This is useful for browsing applications.
*/
int main(int argc, char *argv... |
a44d45d3f245cf37ff1225168ed77548e22a862cb5e1696a6209747c3d439df5 | C++ | 2,008 | 61 | //---------------------------------------------------------------------------//
// Copyright (c) 2014 Roshan <thisisroshansmail@gmail.com>
//
// Distributed under the Boost Software License, Version 1.0
// See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt
//
// See http://boostorg... |
a983fa6cc98aa0c19a762382a802108d32b8ae09d95204ef375e340456b143aa | C++ | 2,008 | 70 | //
// io_context_pool.cpp
// ~~~~~~~~~~~~~~~~~~~
//
// Copyright (c) 2003-2022 Christopher M. Kohlhoff (chris at kohlhoff dot com)
//
// Distributed under the Boost Software License, Version 1.0. (See accompanying
// file LICENSE_1_0.txt or copy at http://www.boost.org/LICENSE_1_0.txt)
//
#include "server.hpp"
#includ... |
9ddc9372a1ef034bd8622f736cd2df1a199e86f9fed1c98623d024023dfe6e3b | C++ | 2,009 | 69 | //---------------------------------------------------------------------------//
// Copyright (c) 2013-2014 Kyle Lutz <kyle.r.lutz@gmail.com>
//
// Distributed under the Boost Software License, Version 1.0
// See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt
//
// See http://boosto... |
29341d777a9c9d25f360d13ed966b30f0cbef1fc88aefe2f01bb88b82cf1ed93 | C++ | 2,011 | 49 | // Copyright 2008, Google Inc.
// All rights reserved.
//
// Redistribution and use in source and binary forms, with or without
// modification, are permitted provided that the following conditions are
// met:
//
// * Redistributions of source code must retain the above copyright
// notice, this list of conditions ... |
da7ab3cf0e9b2a293eceed7c5691233d6b61afb557e3c1176dfb75390f85be46 | C++ | 2,011 | 49 | // Copyright 2008, Google Inc.
// All rights reserved.
//
// Redistribution and use in source and binary forms, with or without
// modification, are permitted provided that the following conditions are
// met:
//
// * Redistributions of source code must retain the above copyright
// notice, this list of conditions ... |
54bf44999907f7006ce1a463d7a6760079321ded009248bd83517bb46eeb979b | C++ | 2,012 | 68 | /////////1/////////2/////////3/////////4/////////5/////////6/////////7/////////8
// xml_archive_exception.cpp:
// (C) Copyright 2009 Robert Ramey - http://www.rrsd.com .
// Use, modification and distribution is subject to the Boost Software
// License, Version 1.0. (See accompanying file LICENSE_1_0.txt or copy at
//... |
0fd69f6056f80d743897ad8e6d285f58cf9b60e87b1d427e327884c7473fc4c1 | C++ | 2,016 | 62 | /* Copyright (c) 2002,2003 CrystalClear Software, Inc.
* Use, modification and distribution is subject to the
* Boost Software License, Version 1.0. (See accompanying
* file LICENSE_1_0.txt or http://www.boost.org/LICENSE_1_0.txt)
* Author: Jeff Garland
* $Date$
*/
/** @defgroup date_basics Date Basics
This... |
b8ded6a3fb51ff934f0e0d9dfaa085f254d72ff1cbe7e964217c2941bfa02ae3 | C++ | 2,021 | 65 | #include "lsl_cpp.h"
#include <iostream>
#include <time.h>
#include <stdlib.h>
using namespace std;
/**
* This example program offers an 8-channel stream, float-formatted, that resembles EEG data.
* The example demonstrates also how per-channel meta-data can be specified using the .desc() field of the stream i... |
ea5d10a0ad4db3b014da344edf484b2526aa2935774dd833d1a17cae9a1fa1ee | C++ | 2,021 | 75 | // Boost.Bimap
//
// Copyright (c) 2006-2007 Matias Capeletto
//
// Distributed under the Boost Software License, Version 1.0.
// (See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt)
// VC++ 8.0 warns on usage of certain Standard Library and API functions that
// can be cause bu... |
483747b88a36af7a83f82b1bb39b703cf309c87205bd54141acf5ca690d5e53d | C++ | 2,027 | 89 | #include "conversion.h"
#include <algorithm>
////////////////////////////////////////////////////////////////
// Specializations for converting a string to specific types
namespace
{
// we're not gonna mess with the mess that is all the isupper/etc. functions
bool IsLower(char ch) { return 'a' <= ch && ch <= 'z'; }... |
94ab6ead63db5e91fd03ddd2b62aa836a6763cc5a57451227fabd5d359a2bd00 | C++ | 2,029 | 60 | //---------------------------------------------------------------------------//
// Copyright (c) 2015 Jakub Szuppe <j.szuppe@gmail.com>
//
// Distributed under the Boost Software License, Version 1.0
// See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt
//
// See http://boostorg.gi... |
eef2bbc8049d43ec52651e610b7cac58dd11daed91a32de04d29ccabdc55d269 | C++ | 2,029 | 47 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2011 Gael Guennebaud <g.gael@free.fr>
//
// Eigen is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
// License as published by the Free Software Found... |
5b93b8cb7e5151cc4e0a5d0d1ab793fa469bce0c62b50281d58a7c5dbb508f95 | C++ | 2,031 | 62 | //---------------------------------------------------------------------------//
// Copyright (c) 2014 Roshan <thisisroshansmail@gmail.com>
//
// Distributed under the Boost Software License, Version 1.0
// See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt
//
// See http://boostorg... |
e5e47c086f932471e0ca748a62b3b1597e5e731f4d34fb8cb8b2ca2db7ba3ed0 | C++ | 2,033 | 40 | // Copyright 2009, Google Inc.
// All rights reserved.
//
// Redistribution and use in source and binary forms, with or without
// modification, are permitted provided that the following conditions are
// met:
//
// * Redistributions of source code must retain the above copyright
// notice, this list of con... |
eae8e58f2fee63c8ffea933b58f649571d74a7c5c70101c8ebe2447cc0834e09 | C++ | 2,034 | 57 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra. Eigen itself is part of the KDE project.
//
// Copyright (C) 2006-2008 Benoit Jacob <jacob.benoit.1@gmail.com>
//
// Eigen is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Publ... |
356f6ee5f27621f0c2378824857c0151eade9894af1c16121e76e5f9500ab2dd | C++ | 2,035 | 86 | //
// Copyright (c) 2016-2019 Vinnie Falco (vinnie dot falco at gmail dot com)
//
// Distributed under the Boost Software License, Version 1.0. (See accompanying
// file LICENSE_1_0.txt or copy at http://www.boost.org/LICENSE_1_0.txt)
//
// Official repository: https://github.com/boostorg/beast
//
// prevent ssl.hpp f... |
19d23ed8a6eb88ef2bbe8b2160222b0e6f10dfcd4741657a424d7dc3c996f969 | C++ | 2,037 | 43 | #include "funPrimaryAlignMark.h"
void funPrimaryAlignMark(Transcript **trMult, uint64 nTr,
Parameters &P, int maxScore, std::uniform_real_distribution<double> rngUniformReal0to1, std::mt19937 rngMultOrder)
{
if (nTr==1){//unique mappers
trMult[0]->primaryFlag=true;
} else {//m... |
67ded5924b7a77e7c85ee502c9306e28d805297221cd5db4faee846d4bb53d0f | C++ | 2,037 | 60 | //---------------------------------------------------------------------------//
// Copyright (c) 2014 Roshan <thisisroshansmail@gmail.com>
//
// Distributed under the Boost Software License, Version 1.0
// See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt
//
// See http://boostorg... |
e39fd1c35d76effd4fb2e5903db985a342f1e138953bd8fd36b2be977adaf49f | C++ | 2,040 | 47 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2011 Gael Guennebaud <g.gael@free.fr>
//
// Eigen is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
// License as published by the Free Software Found... |
361db6318e73475eef92f127ec791f91cf1580613e67f444182ecb5478750c2e | C++ | 2,041 | 57 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra. Eigen itself is part of the KDE project.
//
// Copyright (C) 2006-2008 Benoit Jacob <jacob.benoit.1@gmail.com>
//
// Eigen is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Publ... |
9d2768ad73087fa2876d7872a7dc0fb0dbe93d97dc5657883ae335461a7dd701 | C++ | 2,048 | 103 | //
// Copyright (c) 2016-2019 Vinnie Falco (vinnie dot falco at gmail dot com)
//
// Distributed under the Boost Software License, Version 1.0. (See accompanying
// file LICENSE_1_0.txt or copy at http://www.boost.org/LICENSE_1_0.txt)
//
// Official repository: https://github.com/boostorg/beast
//
#include <boost/conf... |
2ec927c3c87a02675fc24fcfe918a6323ee8fb778cb97c4ef89d38a6ada4e92f | C++ | 2,051 | 74 | #include "../src/consumer_queue.h"
#include "../src/sample.h"
#include <atomic>
#include <catch2/catch.hpp>
#include <thread>
// clazy:excludeall=non-pod-global-static
TEST_CASE("consumer_queue", "[queue][basic]") {
const int size = 10;
lsl::factory fac(lsl_channel_format_t::cft_int8, 4, size / 2);
lsl::consumer_q... |
6bb582975ec30255a4231940dd6e1a6d7de8b3387e5c467bb9a65f7ecb6f69c6 | C++ | 2,052 | 89 | //
// server.cpp
// ~~~~~~~~~~
//
// Copyright (c) 2003-2022 Christopher M. Kohlhoff (chris at kohlhoff dot com)
//
// Distributed under the Boost Software License, Version 1.0. (See accompanying
// file LICENSE_1_0.txt or copy at http://www.boost.org/LICENSE_1_0.txt)
//
#include <ctime>
#include <iostream>
#include <... |
c52b65e7181610d6e577631cd50177399884913ff28d08aedfedc92f05185044 | C++ | 2,059 | 45 | // Copyright 2008 Google Inc.
// All Rights Reserved.
//
// Redistribution and use in source and binary forms, with or without
// modification, are permitted provided that the following conditions are
// met:
//
// * Redistributions of source code must retain the above copyright
// notice, this list of conditions a... |
1c4ae8ef00f310bd12b14517aa5e60dbfcd8cbf4144be8bfa0c8af17d3d085d8 | C++ | 2,066 | 66 | //---------------------------------------------------------------------------//
// Copyright (c) 2014 Roshan <thisisroshansmail@gmail.com>
//
// Distributed under the Boost Software License, Version 1.0
// See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt
//
// See http://boostorg... |
aff33fc6ebab0a5a23ab8f86ce7eb216f61dd78ea1bc86e42725f07023c551e2 | C++ | 2,066 | 105 | //
// Copyright (c) 2016-2019 Vinnie Falco (vinnie dot falco at gmail dot com)
//
// Distributed under the Boost Software License, Version 1.0. (See accompanying
// file LICENSE_1_0.txt or copy at http://www.boost.org/LICENSE_1_0.txt)
//
// Official repository: https://github.com/boostorg/beast
//
#include <boost/conf... |
da400901d9e2230ee0bb8f9b0084ac09a9de4768873c07103cfa310c8f3fec98 | C++ | 2,066 | 67 | //---------------------------------------------------------------------------//
// Copyright (c) 2013 Kyle Lutz <kyle.r.lutz@gmail.com>
//
// Distributed under the Boost Software License, Version 1.0
// See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt
//
// See http://boostorg.gi... |
5ff270fae07cfb4d365a97af8a0bddabc74f0e1d50c5cbbbb494bba69aa30467 | C++ | 2,074 | 65 | //---------------------------------------------------------------------------//
// Copyright (c) 2014 Roshan <thisisroshansmail@gmail.com>
//
// Distributed under the Boost Software License, Version 1.0
// See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt
//
// See http://boostorg... |
5137f662b7481a2eb2d7ef9ca546ac6407a497695bbe6c0af347cb3ad19d421b | C++ | 2,075 | 91 | //
// sender.cpp
// ~~~~~~~~~~
//
// Copyright (c) 2003-2022 Christopher M. Kohlhoff (chris at kohlhoff dot com)
//
// Distributed under the Boost Software License, Version 1.0. (See accompanying
// file LICENSE_1_0.txt or copy at http://www.boost.org/LICENSE_1_0.txt)
//
#include <iostream>
#include <sstream>
#include... |
a9903535d2e0a08679fbab385ce953a619372c3b5d95e17ac4aa38a6dba12fb9 | C++ | 2,078 | 65 | //---------------------------------------------------------------------------//
// Copyright (c) 2014 Roshan <thisisroshansmail@gmail.com>
//
// Distributed under the Boost Software License, Version 1.0
// See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt
//
// See http://boostorg... |
c4fca01d1020bb97aead9683519cc4adcdd5b54466f837ddb565732342316f8d | C++ | 2,078 | 54 | // (C) Copyright Eric Niebler 2005.
// Use, modification and distribution are subject to the
// Boost Software License, Version 1.0. (See accompanying file
// LICENSE_1_0.txt or copy at http://www.boost.org/LICENSE_1_0.txt)
#include <boost/test/unit_test.hpp>
#include <boost/test/tools/floating_point_comparison.hp... |
c6179d55714ead73e21e132a082c3e37276dfc3779e6da16fee31c9185df9e66 | C++ | 2,079 | 74 | /////////1/////////2/////////3/////////4/////////5/////////6/////////7/////////8
// xml_grammar.cpp:
// (C) Copyright 2002 Robert Ramey - http://www.rrsd.com .
// Use, modification and distribution is subject to the Boost Software
// License, Version 1.0. (See accompanying file LICENSE_1_0.txt or copy at
// http://ww... |
82d2d1d3d4aab49600580c7936733a4f2bc02d9136318d0a753ec3b7da4ad28d | C++ | 2,084 | 69 | //---------------------------------------------------------------------------//
// Copyright (c) 2015 Jakub Szuppe <j.szuppe@gmail.com>
//
// Distributed under the Boost Software License, Version 1.0
// See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt
//
// See http://boostorg.gi... |
eb3c437bd75122767fb889e7220e6bcdba7ca810b989cd92b11c80755d082683 | C++ | 2,086 | 68 | //---------------------------------------------------------------------------//
// Copyright (c) 2013 Kyle Lutz <kyle.r.lutz@gmail.com>
//
// Distributed under the Boost Software License, Version 1.0
// See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt
//
// See http://boostorg.gi... |
1f0ee293870c423998f153e40466cec8b0cbf2deddc83c6f85bb6105f8adfd81 | C++ | 2,087 | 49 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// Eigen is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
// License as published by the Free Soft... |
d0a25c7e1ab5f1ae8d7ba430b74c951c00c89bb36d677e916e52ab0ded3baaaf | C++ | 2,089 | 65 | //---------------------------------------------------------------------------//
// Copyright (c) 2015 Jakub Szuppe <j.szuppe@gmail.com>
//
// Distributed under the Boost Software License, Version 1.0
// See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt
//
// See http://boostorg.gi... |
e22faf9bcf309962dd37f4ea516c3fa53939c736f47c1676f56cec4e74a08b44 | C++ | 2,089 | 80 |
#include <boost/property_map.hpp>
namespace yasmic {
namespace impl {
template <typename Index, typename EdgeIndex>
class simple_csr_edge {
public:
Index r;
EdgeIndex i;
simple_csr_edge(Index row, EdgeIndex ind) : r(row), i(ind) {}
simple_csr_edge(... |
ea38b51537e849a40c935f77753eb546ef473710e5793fec311e88f208e65bfc | C++ | 2,093 | 75 | //---------------------------------------------------------------------------//
// Copyright (c) 2013-2014 Kyle Lutz <kyle.r.lutz@gmail.com>
//
// Distributed under the Boost Software License, Version 1.0
// See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt
//
// See http://boosto... |
9881d9cf53bbaa96dd46a0f22c8bfbb1b8991c15c9c31dc44f25425b954fafd3 | C++ | 2,095 | 51 | //=====================================================
// Copyright (C) 2008 Gael Guennebaud <g.gael@free.fr>
//=====================================================
//
// This program is free software; you can redistribute it and/or
// modify it under the terms of the GNU General Public License
// as published by the... |
58c6c41029ef72c46adec18e797272a8b4e9255c98b27c866af3852025b6ebda | C++ | 2,098 | 45 | #include "genomeParametersWrite.h"
#include "streamFuns.h"
void genomeParametersWrite(string fileName, Parameters& P, string errorOut, Genome &mapGen)
{//write the genome information into the genomePar stream
ofstream & genomePar = ofstrOpen(fileName, errorOut, P);
genomePar << "### "<<P.commandLineFull <<"\n... |
e05d7b22eef6012707578843eddabfd28c6bdb69343ebb9c5f4f79bd82ae37f4 | C++ | 2,104 | 74 |
#include <boost/property_map.hpp>
template <typename Index, typename EdgeIndex>
class simple_csr_edge {
public:
Index r;
EdgeIndex i;
simple_csr_edge(Index row, EdgeIndex ind) : r(row), i(ind) {}
simple_csr_edge() : r(0), i(0) {}
bool... |
03bec5b39897999ae8aac22c5df5edb80229ac827eabe5d77b9860d18b9d2ee4 | C++ | 2,106 | 59 | #include "util/strfuns.hpp"
#include <catch2/catch.hpp>
// clazy:excludeall=non-pod-global-static
using vec = std::vector<std::string>;
TEST_CASE("strings are split correctly", "[string][basic]") {
CHECK(lsl::splitandtrim(" ", ',', true) == vec{""});
CHECK(lsl::splitandtrim(" ", ',', false) == vec{});
CHECK(lsl::... |
59f1ab9eb93685c9ba4ebfb026757042d8e3cf2f213029bdbdc3ed875305cb81 | C++ | 2,108 | 68 | //---------------------------------------------------------------------------//
// Copyright (c) 2013-2014 Kyle Lutz <kyle.r.lutz@gmail.com>
//
// Distributed under the Boost Software License, Version 1.0
// See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt
//
// See http://boosto... |
4a703436f3d1ad8d1bd05255716ad89e8fda3d380c583f5feca1049575293408 | C++ | 2,112 | 80 | //
// refactored_echo_server.cpp
// ~~~~~~~~~~~~~~~~~~~~~~~~~~
//
// Copyright (c) 2003-2022 Christopher M. Kohlhoff (chris at kohlhoff dot com)
//
// Distributed under the Boost Software License, Version 1.0. (See accompanying
// file LICENSE_1_0.txt or copy at http://www.boost.org/LICENSE_1_0.txt)
//
#include <boost... |
7cdd224d0b11c5a4ffc0ca0464c8b967c4078507e748d47a320c318a8df5ad3a | C++ | 2,113 | 51 | //=====================================================
// Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
//=====================================================
//
// This program is free software; you can redistribute it and/or
// modify it under the terms of the GNU General Public License
// as publis... |
f18b3b69ba478373b5b0a961a1923910533db0b1b0692eb74b5233cd5a20f54d | C++ | 2,115 | 77 | //
// server.cpp
// ~~~~~~~~~~
//
// Copyright (c) 2003-2022 Christopher M. Kohlhoff (chris at kohlhoff dot com)
//
// Distributed under the Boost Software License, Version 1.0. (See accompanying
// file LICENSE_1_0.txt or copy at http://www.boost.org/LICENSE_1_0.txt)
//
#include "server.hpp"
#include <boost/bind/bind... |
0bf4bce4dded7272b44a31adcb3f563db4f5b1f7c8b0a70572f3a36ea4823def | C++ | 2,117 | 82 | //
// recycling_allocator.cpp
// ~~~~~~~~~~~~~~~~~~~~~~~
//
// Copyright (c) 2003-2022 Christopher M. Kohlhoff (chris at kohlhoff dot com)
//
// Distributed under the Boost Software License, Version 1.0. (See accompanying
// file LICENSE_1_0.txt or copy at http://www.boost.org/LICENSE_1_0.txt)
//
// Disable autolinkin... |
673596e222d208f07561a8e6526a18822b421282d9a2b63c89d72d9a35d73e45 | C++ | 2,127 | 65 | //---------------------------------------------------------------------------//
// Copyright (c) 2013 Kyle Lutz <kyle.r.lutz@gmail.com>
//
// Distributed under the Boost Software License, Version 1.0
// See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt
//
// See http://boostorg.gi... |
75a3dae1a35b2b33273df638d012334487810a463f30a3da2dae06a2ecd166c4 | C++ | 2,128 | 63 | /*
Copyright (c) Marshall Clow 2011-2012, Alexander Zaitsev <zamazan4ik@gmail.com>, 2017.
Distributed under the Boost Software License, Version 1.0. (See accompanying
file LICENSE_1_0.txt or copy at http://www.boost.org/LICENSE_1_0.txt)
For more information, see http://www.boost.org
*/
#include <iostrea... |
a41cc673181391d73dc0c449b6002a9092610a0baef5e553065aad30a3544a04 | C++ | 2,129 | 78 | // Boost string_algo library iterator_test.cpp file ---------------------------//
// Copyright Pavol Droba 2002-2003. Use, modification and
// distribution is subject to the Boost Software License, Version
// 1.0. (See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt)
// See... |
ff4b121098f0fe7cb4abf11fdd31f2fe7a477286ec9175482138bc038d61c807 | C++ | 2,131 | 46 | // Copyright 2009, Google Inc.
// All rights reserved.
//
// Redistribution and use in source and binary forms, with or without
// modification, are permitted provided that the following conditions are
// met:
//
// * Redistributions of source code must retain the above copyright
// notice, this list of conditions ... |
c3240b6cd5995bf3f049717478c8ceafd69cbdd28986720fc1035b0c63947ec5 | C++ | 2,134 | 70 | //---------------------------------------------------------------------------//
// Copyright (c) 2013-2015 Kyle Lutz <kyle.r.lutz@gmail.com>
//
// Distributed under the Boost Software License, Version 1.0
// See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt
//
// See http://boosto... |
2897471d4335ca3a430a4da2ec05b5d07605497e8862f34b3cb4f248a1b20a62 | C++ | 2,136 | 72 | /* simple example for using class array<>
* (C) Copyright Nicolai M. Josuttis 2001.
* Distributed under the Boost Software License, Version 1.0. (See
* accompanying file LICENSE_1_0.txt or copy at
* http://www.boost.org/LICENSE_1_0.txt)
*/
#include <iostream>
#include <boost/array.hpp>
template <typename T>
void... |
ce53be4543031a689d0bd45801fa1aae0fcc4e207756b9a72a909a905b6209bf | C++ | 2,137 | 95 | //
// signal_set.cpp
// ~~~~~~~~~~~~~~
//
// Copyright (c) 2003-2022 Christopher M. Kohlhoff (chris at kohlhoff dot com)
//
// Distributed under the Boost Software License, Version 1.0. (See accompanying
// file LICENSE_1_0.txt or copy at http://www.boost.org/LICENSE_1_0.txt)
//
// Disable autolinking for unit tests.
... |
a0b77c13d2787eee2a96c15f5c88097165132a933507fc7fbc1ed24e901b4baf | C++ | 2,140 | 65 | //---------------------------------------------------------------------------//
// Copyright (c) 2013-2014 Kyle Lutz <kyle.r.lutz@gmail.com>
//
// Distributed under the Boost Software License, Version 1.0
// See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt
//
// See http://boosto... |
2efc15d533b2933df45b76242929d57fc9b1d0d5c20e02d1a778e91ba4f3c687 | C++ | 2,143 | 65 | //---------------------------------------------------------------------------//
// Copyright (c) 2014 Roshan <thisisroshansmail@gmail.com>
//
// Distributed under the Boost Software License, Version 1.0
// See accompanying file LICENSE_1_0.txt or copy at
// http://www.boost.org/LICENSE_1_0.txt
//
// See http://boostorg... |
2180597a4d02fb3dbd870e7ebbce68145995bb14b5f1371cb6d5e68c424bd9ac | C++ | 2,145 | 52 | #include <Eigen/StdVector>
#include <unsupported/Eigen/BVH>
#include <iostream>
using namespace Eigen;
typedef AlignedBox<double, 2> Box2d;
namespace Eigen {
namespace internal {
Box2d bounding_box(const Vector2d &v) { return Box2d(v, v); } //compute the bounding box of a single point
}
}
struct Poin... |
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