sha256 stringlengths 64 64 | language stringclasses 28
values | size int32 1 491k | lines int32 1 23.2k | content stringlengths 1 200k |
|---|---|---|---|---|
f29e65b32f36678f28e98e3dd1e161903ba7ecc7ccc92a2240028f7fea9de05f | MATLAB | 562 | 16 | function [errCode] = ddt_write_v(filename, nch, npoints, freq, d)
import CMBHOME.PLX2Mat.*
% ddt_write_v(filename, nch, npoints, freq, d) Write data to a .ddt file
%
% [errCode] = ddt_write_v(filename, nch, npoints, freq, d)
%
% INPUT:
% filename - if empty string, will use File Open dialog
% nch - number of channels... |
169da331ac056ee8465194eb42da6dfef17206f40f30e7a46a6bda6a975509b9 | MATLAB | 563 | 20 | function options = ea_detsides(options)
if isfield(options.subj, 'recon') && isfile(options.subj.recon.recon)
load(options.subj.recon.recon, 'reco');
sides = [];
if isfield(reco,'native')
for el=1:length(reco.native.markers)
if ~isempty(reco.native.markers(el).head)
side... |
47990dde4bb30b191bb60c05e3b9784d3dc175420708cbd8731150147a4d9606 | MATLAB | 564 | 18 | function [node,elem,face]=v2m(img,isovalues,opt,maxvol,method)
%
% [node,elem,face]=v2m(img,isovalues,opt,maxvol,method)
%
% volumetric mesh generation from binary or gray-scale volumetric images
% shortcut for vol2mesh
%
% author: Qianqian Fang (fangq <at> nmr.mgh.harvard.edu)
%
% inputs and outputs are similar to tho... |
aa833036e9154ec7d09b61e6463fc56158866e82de419004ae125316ae4cf43c | MATLAB | 564 | 17 | function obj=geom_hline(obj,varargin)
% geom_abline Display an horizontal reference lines in each facet
%
% Example syntax: gramm_object.geom_abline('yintercept',1,'style','k--')
% See geom_abline for details
p=inputParser;
my_addParameter(p,'yintercept',0);
my_addParameter(p,'style','k--');
my_addParameter(p,'extent'... |
0b665876e571a01f2eec63a372ec425035bd014e2f85b634fa6acd50a0ee3184 | MATLAB | 565 | 14 | function emat=ea_antsmat2mat_empirical(options)
% Extra empirical check of the scrf matrix
moving = options.subj.brainshift.anat.moving;
anchor = options.subj.brainshift.anat.anchor;
mov = ea_load_nii(moving);
[vxx, vyy, vzz] = ind2sub(size(mov.img),1:100:numel(mov.img));
XYZ_mov_vx = [vxx; vyy; vzz; ones(1,length(vx... |
0f7aedf655dc65a663cc528c1ff3add99de339d916e04c8bf2b433809fe39a78 | MATLAB | 565 | 14 | function varargout = ChaosLibrary(varargin)
%CHAOSLIBRARY (deprecated) Use chaos_library instead.
% ChaosLibrary has been renamed to chaos_library. This shim forwards every argument and
% output unchanged, so existing scripts keep working, and warns once per
% session.
%
% Silence with: warning('off','ChaosLibr... |
26d8fddb568e3ab3b2ddfee6679d1ca14d40106b03cba0be31dde15a6a17caf5 | MATLAB | 565 | 22 | fniis=dir('*.nii');
for fnii=1:length(fniis)
nii=ea_load_nii(fniis(fnii).name);
nii.img=round(nii.img);
of=fopen([fn,'.txt'],'w');
for c=1:max(nii.img(:));
[xx,yy,zz]=ind2sub(size(nii.img),find(nii.img==c));
XYZ=[xx,yy,zz,ones(length(xx),1)]';
XYZmm=[nii.mat*XYZ]';
XYZmm=XYZmm... |
2a9fd3f057a4f5c76e179d2535eec05636615e5f24d564ba12c137ae018a1b0e | MATLAB | 565 | 29 | function y=myfilter(x,ncu,ts)
% Usage ... y=myfilter(x,ncu_or_fco,ts)
hp_flag=0;
if ncu<0,
hp_flag=1;
ncu=abs(ncu);
end;
if (exist('ts')),
df=(1/length(x))*(1/ts);
ncu=round(ncu/df);
disp(sprintf(' actual cutoff = %f (%d)',ncu*df,ncu*2))
end;
x=x(:);
xft=fft(x);
%if (ncu>length(x)/2),
... |
d197d32070adebde28b70f91e48c69ac05041439d2b5bc8a66f272fc7677e895 | MATLAB | 565 | 14 | function varargout = Surr_findrho(varargin)
%SURR_FINDRHO (deprecated) Use surr_find_rho instead.
% Surr_findrho has been renamed to surr_find_rho. This shim forwards every argument and
% output unchanged, so existing scripts keep working, and warns once per
% session.
%
% Silence with: warning('off','Surr_find... |
a44d470c0e167ed2f4f48edb39f33afbadb8ed42f5c7165737579794d6e28150 | MATLAB | 567 | 24 | function mpgMean = apply_RF_matlab(signal, trainedML, MLdebias)
% Apply pretrained Random Forest regressor
%
% Author:
% Dr. Marco Palombo
% Cardiff University Brain Research Imaging Centre (CUBRIC)
% Cardiff University, UK
% 8th December 2021
% Email: palombom@cardiff.ac.uk
Mdl = trainedML.Mdl;
Slope = trainedML.Slop... |
1f68fdacd6f5095aed25a8f1942aab3e7a143d74a33f4201f41026aefbd7c57e | MATLAB | 568 | 23 | function [yes] = isfilextension(fname, extension)
% See also CHECK_FILE_EXTENSION, CLEAR_FILE_EXTENSION.
%
% File: isfilextension.m
% Author: Ioannis Filippidis, jfilippidis@gmail.com
% Date: 2012.06.22
% Language: MATLAB R2012a
% Purpose: check if file has the desired extension
% Copyright: Ioa... |
3e66dda5673f5a9db0aa6878e8b222a46d63afc441073ca54b7b82681d9fc5dd | MATLAB | 568 | 14 | %gaussian cut
function g = gaussian_cut(x, a, x0, sigma, xcut)
g = a .* exp(-(x - x0) .^ 2 / (2 * sigma .^ 2));
g(x < xcut) = 0;
% if diff(g(1:2))<0%wierd shape
% if length(g(1:find(g==max(g)))) < length(g(end:-1:find(g==max(g))-1))
% g(1:find(g==max(g))) = g(find(g==max(g))... |
548200de4f0b298f4f1538b5344713c8febb39bff82db5752669000ec7c4f7b1 | MATLAB | 568 | 16 | function tree = setfilename(tree,filename)
% XMLTREE/SETFILENAME Set filename method
% FORMAT tree = setfilename(tree,filename)
%
% tree - XMLTree object
% filename - XML filename
%__________________________________________________________________________
%
% Set the filename linked to the XML tree as file... |
4db0b4ac57edd81ce086a631cd748fbb654fea0a596afc302c39242943b7df69 | MATLAB | 569 | 20 | function prob = montecarlo(A,b,Sigma,notrials);
% Probability estimate using Monte Carlo methods
%
% Estimates the probability that a random vector x in R2
% with mean zero and covariance Sigma satisfies Ax <= b,
% based on 100 * notrials trials. Sigma must be PSD.
m = size(A,1);
R = chol(Sigma); % Y = R^{-T}X has... |
af958b90456c83bfe247d74de309ab05f79220f3c1d3e7a5066c9876ff17a575 | MATLAB | 569 | 21 | function shuffledArray = kshuffle(inputArray, DIM)
%
% shuffledArray = kshuffle(inputArray, DIM)
%
% Shuffles a matrix by row or column dimension.
%
% Kian Torab
% kian.torab@utah.edu
% Department of Bioengineering
% University of Utah
% Version 1.1.0 - March 4, 2010
switch DIM
case 'r... |
cf6f8641096a792a0b9b9e91dc412984ad7c3aeed46c12c889a2b523c1661d73 | MATLAB | 569 | 16 | function names = fieldnames(this)
% Fieldnames method for GIfTI objects
% FORMAT names = fieldnames(this)
% this - GIfTI object
% names - field names
%__________________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% Guillaume Flandin
... |
0c5bfeca552965e5b4fb9c12286f101d2989a9e59006e0d53232e06fac8d09aa | MATLAB | 570 | 19 | function ea_chirp(options)
if ~exist('options','var')
options.prefs=ea_prefs;
end
try
if options.prefs.env.logtime;
f=fopen([options.root,options.patientname,filesep,'ea_timelog.txt'],'a');
fprintf(f,[date,': Process took %.2f seconds\n'],toc(options.tic));
fclose(f);
end
end
try
... |
2433df9eb2873588725044fb1f89dcad89835e450c22c7df42a45fd89e0c7965 | MATLAB | 570 | 12 | function ea_convert_spm_warps(subj)
% Convert SPM deformation field into ITK format
forwardBaseName = subj.norm.transform.forwardBaseName;
inverseBaseName = subj.norm.transform.inverseBaseName;
if isfile([forwardBaseName, 'spm.nii'])
ea_spm_fwd_displacement_field_to_ants([forwardBaseName, 'spm.nii'], [forwardBase... |
32d4de441ebb0854b219b519d9d267f26c87c6fccdb1369ceec317cc63c8e57b | MATLAB | 570 | 39 |
%
% computes the principal eigenvector of a [nm nm] markov matrix
%
% j harel 6/06
function [v,iter] = principalEigenvectorRaw( markovA , tol )
if ( sparseness(markovA) < .4 )
markovA = sparse(markovA);
end
D = size(markovA,1);
df = 1;
v = ones(size(markovA,1),1)/D;
oldv = v;
oldoldv = v;
iter = 0;
while ( ... |
4399edc2ff4f1c7331ede85f2945a7f598660ec6468956249025d75742132b9e | MATLAB | 570 | 35 | function y2=ybin(x,bsize)
% Usage ynew=ybin(x,binsize)
if bsize==1;
y2=x;
if nargout==0, show(y2), clear y2, end;
return;
end
if prod(size(x))==length(x), x=x(:); end;
ydim=size(x,1);
iend1=floor(ydim/bsize)*(bsize);
if size(x,2)>1,
y=x(1:bsize:iend1,:);
%[bsize iend1 iend2],
for mm=2:b... |
4f26794e290ed95a33f2e3138e3c2589bceec5b971447355830d498cfe1201e6 | MATLAB | 570 | 22 | EXCLUDE_DEMO_TRIALS = 1;
COL_TRL = 4;
switch TYPE
case 'AM'
COL_DIR = 7;
COL_RESPONSE_DIR = 10;
COL_RESPONSE = 11;
COL_RESPONSE_INITIAL = 12;
COL_TIME_START = 14;
COL_TIME_STOP = 15;
COL_TIME_RESP = 16;
COL_MAX = 16;
case 'SFM' ... |
bc04b580c2ddc75454d1299cbcd4e6da8506ad713180018bc0b9005a72c0c007 | MATLAB | 570 | 22 | function epochIdx = indexepochs(epochLength, samples)
% Produce a start and end index (in samples) for each epoch in a record,
% based on the given epoch length, and the total number of
% samples in the record
%
% Required inputs:
%
% epochLength = Epoch length in samples
%
% samples = Total samples in the record
%
% O... |
5adc291a56060cd6e1bd267495bea416b6f6e378e1ad702b82f42a4147bfb0ed | MATLAB | 571 | 21 | function [f,df,lambda] = nll_poissPlasticity(bta,X,Yy,opts)
% The log of the binned slow rate (opts.rate) is used as a regressor, with the
% weight fixed to be 1. Only the basis parameters affect the likelihood and its
% gradient.
% Coupling component
cc = X*bta;
% Predicted rate in bins of size dt (can be interprete... |
a41cdea000dc83739e724676cd0ae028598cc1e8ee6b7f281b710718a2f1e015 | MATLAB | 571 | 21 | function ea_gencheckreg(~,~,handles)
% function to simply export checkreg figures for selected patients from
% Menu
disp('Generating check-reg figures for selected patients...');
leadfigure=handles.leadfigure;
ea_busyaction('on',leadfigure,'dbs');
options=ea_handles2options(handles);
options.macaquemodus=getappdata(... |
cdfa8e7786cb9ecb558ed4ebd6125c1880e73bdb6be8b8f1e569c29869e1573f | MATLAB | 572 | 22 | % Local Regression and Likelihood, Figure 7.4.
%
% Censored Local Likelihood
%
% Author: Catherine Loader
%
% NEED: this is given problems for unknown reasons. something
% to do with censored observations and the ibeta routine.
% if i replace this by
% res[ZLIK] = th*y-y*log(p)
% res[ZDLL] = y*p
% res[ZDDLL] = y*p*(1-p... |
2d93e29631da900527036ea7a901acb1db053a2ec819c7e8e5f6f7dc5808f118 | MATLAB | 573 | 16 | function plugin_reactivate(foldername);
% get plugin path
% ---------------
fullpluginfolder = fullfile(fileparts(which('eeglab.m')), 'deactivatedplugins', foldername);
if ~exist(fullpluginfolder)
error([ 'Could not find folder ' foldername 'in deactivatedplugins folder' ]);
end;
disp(... |
ac4406080afd51f3555b8920277fa125d970763b5e2cb0ea4f7c6860bbf63f21 | MATLAB | 573 | 17 | function version_number = get_ndt_version
% This function returns the neural decoding toolbox version number.
% It assumes that the current neural decoding toolbox contains a directory
% with the current toolbox version in the path in the form ndt.x.y.z/
curr_function_dirname = which('get_ndt_version.m');
start_in... |
4a399256f1c2ff923c264c8530b57527dbf4aef24f87b4bc81d7054b5c8c8327 | MATLAB | 575 | 29 | function yhat=spence15(y)
% function for Spencer's 15-point graduation rule.
% set out following Spencer's hand-calculation method,
% which isn't the shortest computer program!
osev = ones(7,1);
n = length(y);
y = [ osev*y(1); y; osev*y(n) ];
n = length(y);
k = 3:(n-2);
a3 = y(k-1) + y(k) + y(k+1);
a2 = y(k-2) + y(k+... |
5f094ae5807220e7ad3a4dc5917d3393b8af0a38ed2e59127517ffbc8105eecf | MATLAB | 575 | 25 | function yhat=lfsmooth(varargin)
%
% a simple interface to locfit.
% output is a vector of smoothed values, at each data point.
% all locfit options, except evaluation structures, are valid.
%
% Example, to smooth a time series of observations,
%
% t = (1:100)';
% y = 2*sin(t/10) + normrnd(0,1,100,1);
% plot(t,y,'.');
... |
8b915ea484a1a4f644af1d01549ad8bc823bf9403fe46cfc37e321a5bb672c53 | MATLAB | 575 | 20 | function ea_conda_setproxy(proxy)
arguments
proxy {mustBeTextScalar} = '' % proxy to set
end
if isempty(proxy)
proxy = inputdlg('Set proxy for conda and pip', '', 1, {'http://'});
end
if ~isempty(proxy) && ~strcmp(proxy, 'http://')
proxy = proxy{1};
else
return;
end
ea_cprintf('*Comments', 'Set pro... |
ca6cfa1cb5874dfbb986ea42d715178ab488d209ef6870ba66dc3aec7c993738 | MATLAB | 575 | 4 | websave(fullfile(basePath,'20170505_396um_0um_merge.lfp'),'https://buzsakilab.nyumc.org/datasets/TingleyD/DT9/20170505_396um_0um_merge/20170505_396um_0um_merge.lfp')
websave(fullfile(basePath,'20170505_396um_0um_merge.CA1Ripples.events.mat'),'https://buzsakilab.nyumc.org/datasets/TingleyD/DT9/20170505_396um_0um_merge/2... |
0def5e18d2dd0d9f45bfcb7b22e83c42c749e7f6f36a75bc5848e9fe5b2ca3ba | MATLAB | 576 | 14 | function varargout = RelPhase_Disc(varargin)
%RELPHASE_DISC (deprecated) Use rel_phase_disc instead.
% RelPhase_Disc has been renamed to rel_phase_disc. This shim forwards every argument and
% output unchanged, so existing scripts keep working, and warns once per
% session.
%
% Silence with: warning('off','RelP... |
6bffc1b8c10d43a57c1ccc276f01df974e8af8981b9372676c2bb97f2687ed8c | MATLAB | 576 | 24 | function subfun_plot_scatter_regression( x , y , xlim , ylim )
% figure; hold on;
% draw
mdl = fitlm(x, y);
xfit = linspace(min(x), max(x), 200)';
[yhat, yCI] = predict(mdl, xfit);
fill([xfit; flipud(xfit)], [yCI(:,1); flipud(yCI(:,2))], ...
[0.8 0.8 0.8], 'EdgeColor', 'none'); % 灰色置信区间
scatter(x, y, ... |
70047e18a1fa7e0ba01f3b8155ea31fe6743e2721ceaf3681512274f5921c0fa | MATLAB | 576 | 19 | function [mu, sigma2] = CBIG_compute_mu_sigma2(stats, idx1, idx2)
try % LME
beta1 = stats.Bhat(idx1);
beta2 = stats.Bhat(idx2);
beta1_var = stats.CovBhat(idx1, idx1);
beta2_var = stats.CovBhat(idx2, idx2);
beta12_cov = stats.CovBhat(idx1, idx2);
catch % glmfit
beta1 = stats.beta(idx1);
beta... |
7e7c86c5e46ac8729a445931f602b1dbb27625a0a7968afa4eeeddfc46f9c8e4 | MATLAB | 576 | 14 | function varargout = RelPhase_Cont(varargin)
%RELPHASE_CONT (deprecated) Use rel_phase_cont instead.
% RelPhase_Cont has been renamed to rel_phase_cont. This shim forwards every argument and
% output unchanged, so existing scripts keep working, and warns once per
% session.
%
% Silence with: warning('off','RelP... |
a172227dabd18c61fce4d4b0d0c4e5157af90e25722536ded55d166a9885736a | MATLAB | 576 | 11 | %load('SS52244_exp1_5_n7.mat')
fr = 44; % first data frame for pfnpc = 40, first for pfnd and pfna = 44
[left right] = alignDataSines(allflies,[6:10],fr);
thing = [left{10};right{6};left{9};right{7};left{8};right{8};left{7};right{9};left{6};right{10}];
thing = [thing(:,8) thing];
figure; shadedErrorBar([1:9],mean(... |
7241a7ceb3c7f452779f1f82b8a07b40da10784796d65bdd4a3bf27ab049c5ce | MATLAB | 577 | 17 | function varargout=ea_normalize_apply_normalization(options)
% Wrapper function to apply normalization to pre- an post-op images
%
% __________________________________________________________________________________
% Copyright (C) 2014 Charite University Medicine Berlin, Movement Disorders Unit
% Andreas Horn
if isc... |
46624a825c76238744c233c6d82a232260d39b12620c9a68c8b898ba9f3c15af | MATLAB | 578 | 11 | function tifStimParamTable = stimParams2TifTable(tifFiles)
tempStim = load(strrep([tifFiles(1).folder filesep tifFiles(1).name],'.tif','_Pulses.mat'));
tempParams = extractStimParams(tempStim.params, tempStim.pulse);
tifStimParamTable = cell2table(struct2cell(tempParams)','VariableNames',fieldnames(tempParams));
... |
4ab0419d53095cbc7f7b90108f7e6f28002ab41dee61770a825497b6909f534f | MATLAB | 579 | 17 | function p = parent(tree,uid)
% XMLTREE/PARENT Parent Method
% FORMAT uid = parent(tree,uid)
%
% tree - XMLTree object
% uid - UID of the lonely child
% p - UID of the parent ([] if root is the child)
%__________________________________________________________________________
%
% Return the uid of t... |
53534e3d3c221d2eef63bbe57b6701261c78547f58a2599a6a6c98340974c115 | MATLAB | 579 | 17 | function filename = getfilename(tree)
% XMLTREE/GETFILENAME Get filename method
% FORMAT filename = getfilename(tree)
%
% tree - XMLTree object
% filename - XML filename
%__________________________________________________________________________
%
% Return the filename of the XML tree if loaded from disk and an em... |
5b005fb8155ee07326db9e2e6d78702446c8741dee3287db4d4b348d986b090d | MATLAB | 579 | 24 | function y0 = invlink(y,fali)
% inverse link function for locfit.
% y is a vector of raw fitted values.
% fali is the integer [family link] vector from locfit.
% output is the inv. link.
link = fali(2);
switch(link)
case 3 % identity
y0 = y;
case 4 % log
y0 = exp(y);
case 5 % logit -... |
5f3dafa38e6bad0445866cc5fb168797dc49d0079a6c9586471ffa0fd0bbc502 | MATLAB | 579 | 29 | function ea_dcm2niix(dicomdir, outdir)
% Wrapper for dcm2niix
if nargin < 2
outdir = dicomdir;
end
if ~exist(outdir, 'dir')
mkdir(outdir);
end
ea_libs_helper;
basedir = [fileparts(mfilename('fullpath')), filesep];
dcm2niix = ea_getExec([basedir, 'dcm2niix'], escapePath = 1);
if strcmp(outdir(end),filesep... |
95a485875b5342949fa338a97be1194d26b66ceb9f2699b511e9605ef54cbed7 | MATLAB | 579 | 22 | function [handles, data2plot] = dan_scale_psg_data(handles, data2plot)
% Scale the data so that it plots correctly with one channel above the next
% etc
%%
% Authors: Dan Denis
% Date: 2021-07-14
%%
for chan_i = 1:size(data2plot, 1)
scaledData(chan_i,:) = data2plot(chan_i,:) * -1;
if isempty(get... |
68a7d3a8b44333a21452ac7b5c38d12dfce424f41da2ea62e7e4447b675369f1 | MATLAB | 580 | 29 | function [mrs nii_orig] = ea_DPS_nifti_to_hardi(niiName,bvecname,bvalname)
nii_orig = ea_load_untouch_nii(niiName);
nii = nii_orig;
mrs = ea_DPS_nifti_to_mrs(nii);
if nargin == 1,
bvec = importdata([niiName(1:end-3), 'bvec']);
bval = importdata([niiName(1:end-3), 'bval']);
else
bvec = importdata(bvecname... |
d2efe4ae21661ef772585bdb635f830bc662e49c802d0ccdcad07db86c864414 | MATLAB | 580 | 29 | function [] = gen_pep_barplot(PEP, models, outpath)
% generate barplot for models protected exceedance proabilities
if nargin > 2
ifSave = true;
else
ifSave = false;
end
nModels = numel(models);
f = figure;
ax = axes;
bar(ax, PEP, 'FaceColor', [.5, .5, .5]);
xlims = [0.25, nModels+.75];
xlim(ax, xlims);
xtic... |
6e424697c086e2a0dd1dadb8a95e6e7b80e0eaa85a13ebe78b729aded08c9705 | MATLAB | 581 | 30 | function [coeff meanval_sq] = computeFiberCorrelation(bDir,bD)
n = size(bDir,2);
C = abs(bDir'*bDir);
Q = exp(-bD * C.^2);
Q = Q - repmat(mean(Q),[size(Q,1) 1 ]);
P = Q*Q;
[alpha idx] = sort(C(:));
beta = P(idx);
nfac = sqrt(beta(end));
beta = beta / nfac^2;
Q = Q /nfac;
meanval_sq = 0; %sum(Q(1,:))^2/n;
%beta ... |
336edd7d96a4ae1a00cca774b5a511ae5ab544211a75f699c249621f7f34bce1 | MATLAB | 583 | 16 | function bool = onoff2bool(onoff)
%ONOFF2BOOL Substitutes 1 for 'on' and 0 for any other string.
% BOOL = ONOFF2BOOL(ONOFF) returns logical 1 if ONOFF is equal to the
% string 'on' and logical 0 otherwise.
%
% BOOL2ONOFF and ONOFF2BOOL improve readability for Matlab settings
% (e.g., Handle Graphics prop... |
5f369d3cf73d899daa400b209e5fe0627d4742a330937079f00844971edd8744 | MATLAB | 583 | 18 | function obj=geom_funline(obj,varargin)
% geom_funline Display a custom curve in each facet
%
% Example syntax: gramm_object.geom_funline('fun',@(x)3*sin(x),'style','k--')
% The 'fun' argument allows to pass an anonymous function to
% plot
p=inputParser;
my_addParameter(p,'fun',@(x)x);
my_addParameter(p,'style','k--')... |
8148470addae8227a5c91e52b43201d8ff169e119f44b7e9adf63146bca52536 | MATLAB | 583 | 23 | function y=myaffine2d_label(im1,xx,imsize,mask)
% Usage ... y=myaffine2d_label(labelim1,[x0,y0,r0,sx0,sy0],imresize)
%
% Uses translation, rotation and scaling of im1
% if im2 is included in imresize then im1 is rescaled to match im2 first
athr=0.7;
for mm=1:max(im1(:)),
tmpim1=double(im1==mm);
tmpim2=my... |
c33528445c4487a68413eea6d1fcb10d3b381b30bb5aac0e374305edf1058d2a | MATLAB | 583 | 26 | function [w_ent] = ent_weighted(wrp)
N = length(wrp); % get size of the weighted recurrence plot
for j = 1:N
si(j) = sum(wrp(:,j)); % compute vertical weights sums
end
% Compute distribution of vertical weights sums
si_min = min(si);
si_max = max(si);
bin_size = (si_max - si_min)/49; % compute bin size
count = 1;
... |
48f279d4939190160e703fef12b281a385964633585ac01274d79a636a931a17 | MATLAB | 584 | 20 | function y = pow_pos( x, p )
%POW_POS Internal cvx version.
narginchk(2,2);
if ~cvx_isconstant( p ),
error( 'Second argument must be constant.' );
elseif ~isreal( p ),
error( 'Second argument must be real.' );
end
p = cvx_constant( p );
if nnz( p < 1 ),
error( 'Second argument must be greater than or eq... |
a6205a76fb93f9ceb302f0227f90a6f333db17af3f4bfe2c1ca87afb67ee5326 | MATLAB | 584 | 29 | function X=ea_graphvarmat2mat(txtfname,parcellation)
parcfid=fopen([ea_space([],'labeling'),parcellation,'.txt']);
labA=textscan(parcfid,'%f %s\n');
labels=labA{2};
X=nan(length(labels));
d=dir(txtfname);
for fi=1:length(d)
fid=fopen(d(fi).name);
A=textscan(fid,'%s');
M=cellfun(@str2double,A{1});
top... |
fe6c7f5968fb134447599b403ad164c613cd669761db68ba17f2603403586edd | MATLAB | 585 | 27 | function yhat=spence21(y)
% function for Spencer's 21-point graduation rule.
% set out following Spencer's hand-calculation method,
% which isn't the shortest computer program!
oten = ones(10,1);
n = length(y);
y = [ oten*y(1); y; oten*y(n) ];
n = length(y);
k = 4:(n-3);
y1 = -y(k-3) + y(k-1) + 2*y(k) + y(k+1) -y(k+3... |
111d9deac7db8e553cf6978af2d3ba027df05704977399be0dcee9e3c517ccbd | MATLAB | 586 | 30 |
function C = cmult(A,B,idxA,idxB)
szA = size(A);
szB = size(B);
szA = [szA ones(1,max(idxA)-length(szA))];
szB = [szB ones(1,max(idxB)-length(szB))];
if nargin == 2,
idxA = length(szA);
idxB = 1;
end;
permA = 1:length(szA);
remainA = setdiff(permA,idxA);
permA = [remainA idxA];
permB = 1:length(szB);
rem... |
b45038742cf10a9e1c55923d9cb619c3dd31850b9eb79e4dc51738b34ec53193 | MATLAB | 586 | 22 | function K = kuratowski_subgraph(A,varargin)
% KURATOWSKI_SUBGRAPH Identify a Kuratowski subgraph
%
% K = kuratowski_subgraph(A) is just a wrapper around the
% boyer_myrvold_planarity_test to get the subgraph as the first output
% argument.
%
% K is empty if the graph A is planar.
%
% Example:
% A = clique_graph([... |
c74ef1e7e7d971c7a382bf1b2bd57917a13446136172a3d633f505a9d14defec | MATLAB | 586 | 24 | function iscoreg=ea_seemscoregistered(options)
% function checks if all anatomical images in folder are coregistered or
% not.
iscoreg=1;
directory=[options.root,options.patientname,filesep];
[~,presentfiles]=ea_assignpretra(options);
if length(presentfiles)==1 % only one anatomical image present, nothing to coreg... |
760085f43eaf01c6341f5cf805c4f7c72fb09cad6f9b687e64d8e39b97a95e65 | MATLAB | 587 | 19 | function [P bins] = ProbDist1D(x, nbins);
%PROBDIST1D
% Usage: [P bins] = ProbDist1D(x, nbins);
%
% This function calculates the discrete probability distribution for a
% variable that is in a one dimensional phase space. It is simply a
% normalized histogram using 'hist', so nbins can take any form that hist
% can... |
e16f8849fde2fd31e7f98897dfe31016886d58974b968a1c1234add514246e38 | MATLAB | 587 | 23 | function ea_settransparency(resultfig,togglestates)
xsliceplot=getappdata(resultfig,'xsliceplot');
ysliceplot=getappdata(resultfig,'ysliceplot');
zsliceplot=getappdata(resultfig,'zsliceplot');
if ~isempty(xsliceplot)
if isvalid(xsliceplot)
set(xsliceplot,'FaceAlpha',togglestates.xyztransparencies(1))
end
... |
6374e8467129d2d658aeab7c66b67645dd2db76e925453c061b1fba44811a232 | MATLAB | 588 | 9 | %-----------------------------------------------------------------------
% Job saved on 30-Apr-2018 13:45:07 by cfg_util (rev $Rev: 6460 $)
% spm SPM - SPM12 (6470)
% Written by Nanbo Sun and CBIG under MIT license: https://github.com/ThomasYeoLab/CBIG/blob/master/LICENSE.md
%-------------------------------------------... |
798d9f08fd9b6ddff961a4203a62b571328b7f813b174373d3973547df1cefdf | MATLAB | 589 | 21 | function h = createStopButton
hmain = gcf;
pos = get(hmain,'Position');
h = figure(539375677);
%set(handle,'title','FiberGT Progress Control');
set(h,'NumberTitle','off');
set(h,'resize','off');
set(h,'MenuBar','none')
set(h,'ToolBar','none')
set(h,'Tag','stopbuttonpresent');
set(h,'Name','Progress Control');
set(h,'P... |
d2476d4c49afc214d5dbaaf136fae7d1fe19e2529f78d1ce1f08d5d938fce644 | MATLAB | 589 | 29 | function [ element_num, element_order ] = gmsh_mesh2d_element_size_example ( )
%*****************************************************************************80
%
%% GMSH_MESH2D_ELEMENT_SIZE_EXAMPLE: element size information for the example.
%
% Licensing:
%
% This code is distributed under the GNU LGPL license.
%
... |
52d559f42d617d5d6084019b516359969a6331538098e36660a00e797b8ba252 | MATLAB | 590 | 19 | function intersect=TriangleTriangleIntersection(P1,P2,P3,O1,O2,O3,ignore_corners)
for i=1:6
switch(i)
case 1
A=P1; B=P2; C=P3; E1=O1; E2=O2;
case 2
A=P1; B=P2; C=P3; E1=O2; E2=O3;
case 3
A=P1; B=P2; C=P3; E1=O3; E2=O1;
case 4
... |
9b7128904f878b0d5132d3f01b9115ad557f81834d13f3d6e66131afebf44662 | MATLAB | 590 | 15 |
fileexpnum = '21D07-g7_Mar2822_f1e4'; %thor expt root name
trlcat = 1; zsplit = 0; skip_mc = 0;
[trl_dirs_corr, FOV] = NDK_Motion_Correction5D(fileexpnum, trlcat, zsplit, skip_mc);
save('regroi_vars.mat', 'trl_dirs_corr', 'FOV') %save so can run register_rois without motion correction, if need to
% load regroi_te... |
220d372a186aec68276b17fd11137b31cca910c9b2d24b165d37dfe368af287e | MATLAB | 591 | 21 | function out = ittikochmap( img )
params = makeGBVSParams;
params.useIttiKochInsteadOfGBVS = 1;
params.channels = 'CIO';
params.verbose = 1;
params.unCenterBias = 0;
%
% uncomment the line below (ittiDeltaLevels = [2 3]) for more faithful implementation
% (however, known to give crappy results for small images i.e. ... |
2e578002dc0e687b7c4b6b18b5dc7585bb577b2f6618678e545ac525939269a6 | MATLAB | 591 | 32 | function ea_archivefolders(hobj,evt,cmd,handles)
options = ea_handles2options(handles);
options.uipatdirs = getappdata(handles.leadfigure, 'uipatdir');
options.leadprod = 'dbs';
setappdata(handles.leadfigure,'handles', handles);
options.leadfigure = handles.leadfigure;
for pt=1:length(options.uipatdirs)
disp(... |
8ecd5a1d87c884fd4106329153ed7c98784420a46b0125e953f28f4928664926 | MATLAB | 591 | 21 | function dff = getdff(trace)
if ~isempty(trace)
f = quantile(trace,0.4,1); % This seems to work nicely for most signals, but it may need to be changed for highly active cells
fmean = mean(trace,1);
b = ones(1, size(trace,2));
th = max(trace,[],1)*0.01;
dff = [];
for k = 1:size(trace,2)
i... |
bc4ad59e4c464b5b5299db2328dda3bf3415e8f3acb714a1c405e9524c8f7440 | MATLAB | 591 | 30 | function i4mat_transpose_print ( m, n, a, title )
%*****************************************************************************80
%
%% I4MAT_TRANSPOSE_PRINT prints an I4MAT, transposed.
%
% Licensing:
%
% This code is distributed under the GNU LGPL license.
%
% Modified:
%
% 10 September 2009
%
% Author:
%
%... |
f201dc2c954a7bd7ba39b16acc01f1b869c5c64aba72656957b05ffbd379b112 | MATLAB | 592 | 21 | function [chan] = bz_GetBestRippleChan(lfp)
%[chan] = bz_GetBestRippleChan(lfp)
%eventually this will detect which lfp channel has the highest SNR for the
% ripple componenent of SPWR events....
[b a]=butter(4,[140/625 180/625],'bandpass');
for i=1:length(lfp.channels)
filt = FiltFiltM(b,a,single(lfp.data(:,i)))... |
64b4acb5651c6a3dcdbe3f194395449e1b44ed18fab812e2355e7ee282c4c620 | MATLAB | 593 | 17 | function out=ea_arenopoints4side(coords_list, side)
%returns true if there are no valid points for this side (if points is empty or if it is all nan)
%this is helpful for determining if it is a valid side with .coords_mm, .coords_acpc, .trajectory
%Enrico Opri, 2020
%this assumes hardcoded R side a... |
f921ac18ded46b077aa3f3ab4b7a5c748c51eef181098e411f9c791ca74c6170 | MATLAB | 593 | 21 | function output_cell = CBIG_MMLDA_matrix2cellstr(input_mtx)
% output_cell = CBIG_MMLDA_matrix2cellstr(input_mtx)
%
% Tranform an array to a cell array.
%
% Input:
% - input_mtx : input matrix
%
% Output:
% - output_cell : ouput cell array
%
% Example:
% input_mtx = [1, 2];
% output_cell = CBIG_MMLDA_matrix... |
39152b98fbe579bae1a26a0f031562bf5eb6f84be2fdba8e2d3b375cddba77fc | MATLAB | 594 | 19 | function [ y, symm ] = cvx_s_symmetric_ut( m, n, symm )
%CVX_S_SYMMETRIC_UT Symmetric matrices (upper triangle storage).
if m ~= n,
error( 'Symmetric structure requires square matrices.' );
end
symm = false;
nsq = n * n;
ntr = 0.5 * ( nsq + n );
c = 0 : n - 1;
c = c( ones( 1, n ), : );
r = c';
mn = min( r, c... |
8da4166fa10773ac17d27d2f0bd57e60bf065c68fc61c939eb7e6a0449d2849a | MATLAB | 594 | 19 | function [ y, symm ] = cvx_s_symmetric( m, n, symm ) %#ok
%CVX_S_SYMMETRIC Symmetric matrices (lower triangle storage).
if m ~= n,
error( 'Symmetric structure requires square matrices.' );
end
symm = false;
nsq = n * n;
ntr = 0.5 * ( nsq + n );
c = 0 : n - 1;
c = c( ones( 1, n ), : );
r = c';
mn = min( r, c );
m... |
92466d30aedb3f00bf89c4118e7cc3c010c7a3e906dbc3f46b5f51a0297cc8b3 | MATLAB | 594 | 22 | % Local Regression and Likelihood, Figure 7.4.
%
% Censored Local Likelihood
%
% Author: Catherine Loader
%
% NEED: this is given problems for unknown reasons. something
% to do with censored observations and the ibeta routine.
% if i replace this by
% res[ZLIK] = th*y-y*log(p)
% res[ZDLL] = y*p
% res[ZDDLL]... |
b710a5d39bde4e0f03b1ebb2545cf4113c727980d284951f62d291527f2dbcdb | MATLAB | 594 | 22 | function varargout=volface(t)
%
% [openface,elemid]=volface(t)
%
% find the surface patches of a volume
%
% author: Qianqian Fang, <q.fang at neu.edu>
% date: 2009/10/13
%
% input:
% t: input, volumetric element list, dimension (ne,4)
%
% output:
% openface: list of faces of the specified volume
% elemid... |
dc757255923c2bdd7346f4625132094974c9dbc19247957a818ab829f8c4256b | MATLAB | 594 | 21 | function ea_bias_field_correction(inputimage)
% Wrapper for ANTs N4BiasFieldCorrection
ea_libs_helper;
basedir = [fileparts(mfilename('fullpath')), filesep];
N4BiasFieldCorrection = ea_getExec([basedir, 'N4BiasFieldCorrection'], escapePath = 1);
cmd=[N4BiasFieldCorrection, ...
' --image-dimensionality 3' ...
... |
117aef0aa477fdb2ae9af32a5a1da16e262ca56f4ba6787fa4f0a2a38494f601 | MATLAB | 595 | 23 | % Local Regression and Likelihood, Figure 7.6.
%
% Estimating the mean survival time using a local weibull
% (transformed Gamma) model.
load heart;
z = 0.625;
ts = (surv+0.5).^z;
fit = locfit(age,ts,'cens',cens,'family','gamma','nn',0.8);
i = find(cens==0);
figure('Name','fig7_6: mean survival time local weibull');
pl... |
24685efd3d3077e0f00d8a54d3936be749ea6e8725a13ed39b972f6e9933ebb1 | MATLAB | 595 | 37 | function [V,E] = quadinv(N,NW)
% calculates the quadratic inverse eigenvectors
%
% Input
% N: number of samples
% NW: time-bandwidth product
%
% Output
% V: The quadratic inverse eigenvectors
% E: the quadratic inverse eigenvalues
x = 0:N-1;
indx = find(x);
y = ones(size(x))*(2*NW/N)^2;
y(indx) = (... |
86665368b32ee421ec899e038f14f9c858fa0f428def7655f85662540af875f6 | MATLAB | 595 | 16 | if ismac
compflags = '';
elseif isunix
compflags = 'COMPFLAGS=''$COMPFLAGS -static-libstdc++''';
elseif ispc
compflags = 'COMPFLAGS="$COMPFLAGS /MT"';
end
mex(compflags, 'AccumulateBilin.cpp');
mex(compflags, 'AccumulateBilinWeighted.cpp');
mex(compflags, 'anisoDiffusion.cpp');
mex(compflags, 'anisoDiffusionH... |
aa1d7c91b2963a8894aac07cdd65e6d70f94be80643b6241eaad74333faaacea | MATLAB | 595 | 19 | function fieldExist = myIsField(inStruct, fieldName)
% inStruct is the name of the structure or an array of structures to search
% fieldName is the name of the field for which the function searches
fieldExist = 0;
f = fieldnames(inStruct(1));
for i=1:length(f)
if(strcmp(f{i},strtrim(fieldName)))
fieldExist ... |
043aaee7c6da9be7971fce9ff8560db347d6877be0059ee35d036ff6a29941e1 | MATLAB | 596 | 17 | function filename = getfilename(tree)
% XMLTREE/GETFILENAME Get filename method
% FORMAT filename = getfilename(tree)
%
% tree - XMLTree object
% filename - XML filename
%__________________________________________________________________________
%
% Return the filename of the XML tree if loaded from disk a... |
80285f9e43c1684dc9f9e6b1c51740acfea7f37c2225749be9e7d26990951ba2 | MATLAB | 597 | 16 | function mat2file(a,val,varargin)
% Function for writing to file_array objects.
% FORMAT mat2file(a,val,ind1,ind2,ind3,...)
% a - file_array object
% val - values to write
% indx - indices for dimension x (int32)
%
% This function is normally called by file_array/subsasgn
% ___________________________________... |
4fdaf14a743416cd327256aa1659bfeb866ab9de4e5ff1b310682f77b94a6441 | MATLAB | 598 | 23 | function w = rcoswin(N)
%RCOSWIN Raised cosine window.
%
% IOSR.DSP.RCOSWIN(N) returns an N-point raised cosine window.
%
% See also GAUSSWIN, CHEBWIN, KAISER, TUKEYWIN, WINDOW.
% Copyright 2016 University of Surrey.
assert(isscalar(N) && round(N)==N, 'iosr:rcoswin:invalidN', 'N must be a scalar and w... |
abb643ddd42e5965eda3195f53f1109e212995235acb9038c278f89472c4b33a | MATLAB | 598 | 16 | %% convertMedtronicCoordToLPI - be careful with that
%
% Andreas Husch
% Centre Hospitalier de Luxembourg, Dept. of Neurosurgery /
% University of Luxembourg - Luxembourg Centre for Systems Biomedicine
% 2014 - 2017
% mail@andreashusch.de, husch.andreas@chl.lu
function pointsLPI = convertMedtronicCoordToLPI(pointsInMm,... |
01a3c824071986e41b52052eac07311b48a06f65397cb8c25d483f447d690922 | MATLAB | 599 | 13 | % std_findoutlierclust() - determine whether an outlier cluster already exists
% for a specified cluster. If so, return the outlier cluster index.
% If not, return zero. This helper function is called by
% pop_clustedit(), std_moveoutlier(), std_renameclust().
funct... |
0e6749ead2412edaafb2583eba51934e656c1a2b863914389d9d10eba142ab96 | MATLAB | 600 | 16 | function sels=ea_storeupdatecortex(jtree,h)
for root=1:length(h.sg)
for branch=1:length(h.sgsub) %side
sels.branches{branch}=h.sgsub{branch}.getSelectionState;
for leaf=1:length(h.sgsubfi{branch})
sels.leaves{branch}{leaf}=h.sgsubfi{branch}{leaf}.getSelectionState;
if isfiel... |
9bd8a9e85493643ab257c992db379a3fdf0443fac1813deafac3cbc2e36e7887 | MATLAB | 600 | 16 | % List of open inputs
% Population to ICBM Registration: Dartel Template - cfg_files
% Written by Nanbo Sun and CBIG under MIT license: https://github.com/ThomasYeoLab/CBIG/blob/master/LICENSE.md
addpath(spm_dir)
nrun = 1; % enter the number of runs here
jobfile = {[script_dir '/CBIG_MMLDA_population_to_ICBM_job.m']};... |
f677cbe4d46eeda859e8bfa7f67fdd45885ef29944bc2444fba8d96013459193 | MATLAB | 600 | 20 | function worked = next(vr)
%WORKED=NEXT(VR)
% Advances to the next frame in the video. Returns 0 if the next frame is
% not available.
%
% After the videoReader constructor is called, NEXT, SEEK, or STEP should
% be called at least once before GETFRAME is called.
%
% See videoReader/getinfo for more details on... |
3f934c04544cb413eb01d341ddfd160d985c0c456d925af4eb668f968cfe64c9 | MATLAB | 602 | 22 | function [power_spectrum, power_spectrum_norm] = calc_power_spectrum(data)
% calc_power_spectrum.m
%
% Calculate spatial power spectrum from eigenmode analysis
%
% Inputs: data : data [NxP]
% N = number of modes, P = number of independent data
%
% Outputs: power_spectrum ... |
845bf2fb5511ed59c16c08867028770168fac461d2addced733437ec54fe5155 | MATLAB | 602 | 16 | function val = file2mat(a,varargin)
% Function for reading from file_array objects.
% FORMAT val = file2mat(a,ind1,ind2,ind3,...)
% a - file_array object
% indx - indices for dimension x (int32)
% val - the read values
%
% This function is normally called by file_array/subsref
% ______________________________... |
3d094312854042af080a1967432db02b3d13db52e463764d6fd5ab4291ab1a62 | MATLAB | 603 | 24 | function y0 = invlink(y,fali)
% inverse link function for locfit.
% y is a vector of raw fitted values.
% fali is the integer [family link] vector from locfit.
% output is the inv. link.
link = fali(2);
switch(link)
case 3 % identity
y0 = y;
case 4 % log
y0 = exp(y);
case ... |
c9b96ba679e37a1d0b24cbc58c26a8e593a4a3deaddf7b0fc8791a02b8878058 | MATLAB | 603 | 18 | function s = struct(this)
% Struct method for GIfTI objects
% FORMAT s = struct(this)
% this - GIfTI object
% s - a structure containing public fields of the object
%__________________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% Guillau... |
e242cd718a9d02c3b259d634b7bb92aae160c1ed09da46d1435b4f1fc990e898 | MATLAB | 603 | 19 | function logprobs = getLogProbsGMM(model, metrics, comps2Use)
% Compute log probabilities for feature vectors under a supplied GMM, with
% the logprob computed using the desired number of GMM components
if nargin < 3
comps2Use = 1:model.NumComponents;
end
% Compute likelihoods
% Full mixture LLR for all neurons
N... |
0cd4c94676c658b5f343b802540e19b59b0aeb688a61e02ea94689ea7ee6394e | MATLAB | 605 | 17 | function [n, npw, ts, wave] = plx_waves(filename, ch, u)
import CMBHOME.PLX2Mat.*
% plx_waves(filename, channel, unit): Read waveform data from a .plx file
%
% [n, npw, ts, wave] = plx_waves(filename, channel, unit)
%
% INPUT:
% filename - if empty string, will use File Open dialog
% channel - 1-based channel numbe... |
45d952d7409267902d63797a12459e4cfde7ce71e25258977dd996a9fd4044ed | MATLAB | 605 | 29 |
%%%%
% specifiy here the norm used for the likelihood
% chi2 = (S-M)'*W*(S-M)
%%%%
function [W Q] = createWeightingScheme(ten,bweight)
% be careful: not really included in the hashnum (sometimes there is an ambig.) so you have to rm -r /tmp/mesoGT/*
b = squeeze(ten(1,1,:) + ten(2,2,:) + ten(3,3,:));
% for the mo... |
5fd9969bfa68f76a9ff6b0e7ba8a5c9ad6f1f9a1b07c442b07196cb3bd4a77e6 | MATLAB | 605 | 26 | function [ft, w] = ctfft(f, t)
% ctfft.m
%
% Calculate continuous fourier transform using FFT
%
% Inputs: f : function to take fourier transform [1xT]
% T = length of time
% NOTE: f must be centered around 0
% t : time vector [1xT]
%
% Outputs: ft : Fourier transform of function ... |
8d8f783b1230f97648266adb1146b92a09479db527ab6d0a27a9cddf4c2bbf7e | MATLAB | 605 | 19 | function coordsmm=ea_read_fiducials(path,options)
% Small function to read fiducials (coordinates of electrode contacts) in
% Slicer3 format.
% __________________________________________________________________________________
% Copyright (C) 2014 Charite University Medicine Berlin, Movement Disorders Unit
%
% Andreas ... |
c5b1174182b15b9362cf72f40c13de21a269bbb6ac7bcc812a1e72c37cc32a41 | MATLAB | 605 | 19 | function [P bins] = ProbDist1D(x, nbins);
%PROBDIST1D
% Usage: [P bins] = ProbDist1D(x, nbins);
%
% This function calculates the discrete probability distribution for a
% variable that is in a one dimensional phase space. It is simply a
% normalized histogram using 'hist', so nbins can take any form that his... |
0f32f7738df1a2dedba1cd2ca089de9590a4f5fcf3b68022849d9dfb4abbfb45 | MATLAB | 606 | 23 | % Local Regression and Likelihood, Figure 2.6.
%
% Influence and variance functions.
load ethanol;
d = [2 3];
a = [0.49 0.59];
main = {'Local Quadratic','Local Cubic'};
f=['a','b'];
for (i=1:2)
figure('Name', sprintf( 'figure2_6%c: Influence and variance functions', f(i) ) );
fit = locfit(E,NOx,'nn',a(i),'deg',d(i... |
29c5785ec6fba1200f72a585db519540e8577f488a48671688b4213cd350aafe | MATLAB | 606 | 23 | function z = svec( x, nrm )
if nargin < 2 || isempty( nrm ) || isequal( nrm, 'fro' ),
nrm = 2;
elseif ~isnumeric( nrm ) || length( nrm ) ~= 1 || nrm < 1,
error( 'Second argument must be a number between 1 and Inf, or ''fro''.' );
end
if ~isreal( x ) && nrm ~= 2,
z = vec( x );
return
else
[ xR, y ]... |
47a9cb087578a4fda6eadcae3bb8683d5d527c4be67e39918c8b1fb27c6e7c40 | MATLAB | 606 | 20 | function montage = dan_empty_montage(psg)
%%
% Authors: Dan Denis
% Date: 2021-07-14
%%
% Fill montage struct with default info
montage.chanList = psg.chans;
montage.hideChans = [];
montage.showChans = {psg.chans.labels}';
montage.reref = cell(length(psg.chans), 1);
... |
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