sha256 stringlengths 64 64 | language stringclasses 28
values | size int32 1 491k | lines int32 1 23.2k | content stringlengths 1 200k |
|---|---|---|---|---|
b121375eafd303432afde93e871a9f09435c454f1320275f14e526eaf9f8fc43 | MATLAB | 1,977 | 63 | function results = vl_test_vlad(varargin)
% VL_TEST_VLAD
vl_test_init ;
function s = setup()
randn('state',0) ;
s.x = randn(128,256) ;
s.mu = randn(128,16) ;
assignments = rand(16, 256) ;
s.assignments = bsxfun(@times, assignments, 1 ./ sum(assignments,1)) ;
function test_basic (s)
x = [1, 2, 3] ;
mu = [0, 0, 0] ;
a... |
c1c3238f591f3b91f595b3a6147b610d1d0a452bb165c6f2cb1499676bd9909a | MATLAB | 1,977 | 54 | %{
Copyright (C) Cambridge Electronic Design Limited 2014
Author: James Thompson
Web: www.ced.co.uk email: james@ced.co.uk, softhelp@ced.co.uk
This file is part of CEDS64ML, a MATLAB interface to the SON64 library.
CEDS64ML is free software: you can redistribute it and/or modify
it under the t... |
9ee141f23428885efeec591005e606c0f25a76ba57074f284016151e235ca17f | MATLAB | 1,978 | 67 | % selectBackground.m
%
% Function that allows the user to select the background region from the
% time series's average image. Displays a histogram of pixel intensities
% (normalized as deviation from the mean) and allows the user to select a
% static threshold. Background region is then used for background
% subt... |
98051f8d1319e1f53395d1fb92f048473d8b12ecc574f678637d06d01d42c532 | MATLAB | 1,979 | 56 | classdef ReadRecipeTest < matlab.unittest.TestCase
% Tests for webupload.readRecipe against the cases in upload_contract.json, shared with
% the server's tests so both sides read the same IDs from the same recipe.
properties
Dir
end
methods (TestClassSetup)
function addPackageToPat... |
abec4e21bb8fb4f75ee68d0b4d0736be2bb6fc3bc8f1ea86ed3b9c6ec049a92f | MATLAB | 1,979 | 52 | function hp = plotresults_APP(app, frameData, hp, i)
timeLen = length([frameData.time1]);
if i == 15
% Pupil Horizontal Position
hold(app.UIAxes3, 'on')
hp(1) = plot(app.UIAxes3, [frameData.pupil_x],'r-');
xlim(app.UIAxes3, [0 timeLen]);
ylim(app.UIAxes3, [nanmin([frameData.pupil_x])... |
01058e0adc9677f58421169b187d955d426f43e727e0b17fc9cc683651cf6f32 | MATLAB | 1,981 | 61 | function [path,pathM] = getDendritePath2(M,node,root)
% [path,pathM] = getDendritePath2(M,node,root)
%
% Function to retrieve the path of a dendrite from the full paths matrix until
% it hits the root node. Inputs are:
% - M - pathfrom matrix (matrix containing obsticals to avoid)
% - node - End node location i... |
2d33d64fa8125504451748d7684ed57e32ab96b9ec77ea9b54be06fbdb7b2421 | MATLAB | 1,981 | 63 | function results = vl_test(suite, test)
% VL_TEST Run test suite
% RESULTS = VL_TEST() runs all VLFeat test suites. The tests
% verify that VLFeat is working correctly.
%
% RESULTS is a structure listing the result of each test.
% It has fileds:
%
% TESTNAME: name of the test
% SUCCEDED: a boolean flag indic... |
cd2c2946f73f6156531aeb7ddda8d0145b255287d4e3cc54ab84091f172c27d9 | MATLAB | 1,981 | 80 | function [dprev, dat_cpu, dat, shifts] = ...
shift_batch_on_disk2_dredge(rez, ibatch, shifts, ysamp, sig, dprev)
%% Adapted from Kilosort2.5 function shift_batch_on_disk2.m
%% by Richard Hardstone (2022_11_30)
% register one batch of a whitened binary file
ops = rez.ops;
Nbatch = rez.temp.Nbatch;
NT ... |
5ec231ec2091e3aebb8c728e14443e988c8595db0032dd42ec5ca0a4e07656bb | MATLAB | 1,983 | 61 | function ml_cai_create_neuron_hdf5(outputFilename, rawTraceMatrix, filtTraceMatrix, spikeMatrix, spatialFootprintMatrix)
% Lookout for the dimensions of the spikeMatrix if it comes from CNMFe
% Check the dimensions
%if size(rawTraceMatrix) == size(filtTraceMatrix) == size(spikeMatrix)
numNeurons = size(rawTraceMatri... |
86324cebd124a10db07508d7415ab9b821b7cbdc1a5a7f6bcad9b63cf0bcc120 | MATLAB | 1,983 | 55 | % findAngle2Pts.m
%
% Function to find the angle between two points in x,y plane. Angle of the
% vector that points from (x1, y1) to (x2, y2). In degrees
% Helper function for leg analysis, uses leg coordinate frame, where x axis
% is direction parallel to the long axis of the body and y axis is
% direction parallel... |
6aa1647e31e52ea1ed1539298a62e5d4f142952f631a0f9416991afd59a2177a | MATLAB | 1,988 | 68 | function behav = msSelectPropsForTracking(behav)
%MSSELECTPROPSFORTRACKING Summary of this function goes here
% Detailed explanation goes here
userInput = 'N';
green = cat(3, zeros(behav.height,behav.width), ...
ones(behav.height,behav.width), ...
zeros(behav.height,behav.width));
frame = double... |
86891d4cb5bdc9f75ef8aae0647aaf80627c0e8dd76c4025d3c50f34cedd5a48 | MATLAB | 1,988 | 62 | function p1 = plot_iqr(X, data, centerline, cmap, five_to_ninetyfive, Alpha)
%plot_iqr creates a lineplot of the interquartile range (IQR) given data
% Usage: plot_iqr(X, data, centerline, cmap, five_to_ninetyfive)
%
% Inputs:
% X: A data domain against which to plot the measure of interest
% (defa... |
b0751bdf6bb4d848cc007f37c1adfd46251c4e4d06c0f60205573492592c9861 | MATLAB | 1,988 | 36 | function fH = plotMeanCSTExponent_v_MeanCSSExponent(...
resampled_medianCSTExp,resampled_medianCSSExp,roisToPlot,cmapROIs,saveFigs,saveFigDir)
fH = figure; clf; set(gcf,'Position',[889,294,963,604],'color','w');
for idx = 1:length(roisToPlot)
groupMeanOfMedianCSTExp = mean(resampled_medianCSTExp(:,idx),1,'om... |
e37369e16d8e9ad2b8dbf6d519b42f0417a64f849d4bbd52cfc83c82607d6518 | MATLAB | 1,988 | 62 | function dat = read_deymed_dat(filename, hdr, begsample, endsample)
% READ_DEYMED_DAT reads EEG data from the Deymed Truescan file format
%
% Use as
% dat = read_deymed_dat(filename, hdr, begsample, endsample)
%
% See also READ_DEYMED_INI
% Copyright (C) 2013, Robert Oostenveld
%
% This file is part of FieldTrip, s... |
1e181f648a16815f86cd9f4a93212c284127378f45b34c4a2a936cbe04b7f6f4 | MATLAB | 1,989 | 72 |
function cnn_softmax_evaluate(work_info_batch, group_idx)
work_info_epoch=work_info_batch.ref.work_info_epoch;
opts=work_info_batch.ref.train_opts;
eva_result_batch_mc=do_evaluate_mc(opts, work_info_batch, group_idx);
if ~isempty(eva_result_batch_mc)
eva_result_epoch=work_info_epoch.ref.e... |
42c4a3d7dcfe50858deb6304005b155fca5b11ca9b5a54ea17262793c3831a66 | MATLAB | 1,989 | 56 | % mglLines2.m
%
% usage: mglLines(x0, y0, x1, y1,size,color,<anti-aliasing>)
% by: justin gardner
% date: 09/28/2021 adapted from previous version created on 04/03/06
% copyright: (c) 2021 Justin Gardner (GPL see mgl/COPYING)
% purpose: Function to plot lines on mglMetal screen opened with mg... |
6becde8437e903101fe50517de0e65d9da047395df6dc2a95412cb614e798d34 | MATLAB | 1,989 | 64 | load ../graphs/bfs_example.mat
[i,j,val] = find(A);
% assign a randon number to each edge in the graph
edge_rand = rand(num_edges(A),1);
Av = sparse(i,j,edge_rand, size(A,1), size(A,2));
ee = @(ei,u,v) fprintf('examine_edge %2i, %1i, %1i, %4f, %4f\n', ...
ei, u, v, edge_rand(ei), Av(u,v));
fprintf('\... |
8394e59710a7f1245078447fa6b6756cbc4ca680c6619ffa819b60aa8acfcaae | MATLAB | 1,989 | 56 | function xdot=MePD_sys(~,x,par)
% initialise the system
xdot=zeros(6,1);
% PARAMETERS
d = par.d; % Time Scaling Constant
cll = par.cll; % Gl self-excitation coupling constant
cil = par.cil; % Gi to Gl inhibition coupling constant
cli = par.cli; % Gl to Gi excitation coupling constant
cii = par.... |
452f6a7bcc8a84c8b1e780c57e667e97b355ec339fe64a034409c98a4bc8efdd | MATLAB | 1,990 | 54 | function [FA_profile, SuperFiber, fgClipped, fgResampled] = ...
Compute_FA_AlongFG(fg, dt, roi1, roi2, numberOfNodes)
% Compute a weighted average of a variable (FA) in a track segment
%
% [fa, SuperFiber,fgClipped, fgResampled] = ...
% dtiComputeDiffusionPropertiesAlongFG(fg, dt, roi1, roi2, numberOfNodes, ... |
7acaf8700ff6c324cbf201ced50fe4024fcbbb1bba086803b044778066d98281 | MATLAB | 1,991 | 40 | % Demo for emmeans
clear all
% load data
load carbig
t = table(Acceleration, Cylinders, Displacement, Horsepower, cellstr(Mfg), Model_Year, MPG, cellstr(Origin), Weight,...
'VariableNames',{'acc','cyl','disp','hp','mfg','year','mpg','orig','wgt'});
% predict MPG but interested in Origin differences so mak... |
4c85ea1d43cdd92fe37043272ca8767f954071631350505e5aa6d1095f00f50c | MATLAB | 1,992 | 57 | % shiftIinjStartTime.m
%
% Function that takes in iInj struct (output of preprocessIInj() and an
% amount to shift and returns a modified iInj struct with current
% injection times shifted by input amount (and other struct fields
% modified to match)
% Helper function for computeLegStepsFictracEphysIinj_1Fly()
%
% I... |
00385e25025eb89f3554718e24415a3c355fb04a3ae615469fde7a2fd954de3f | MATLAB | 1,993 | 56 | function TR_seconds = read_TR_MC_none(filename, startRow, endRow)
%IMPORTFILE Import numeric data from a text file as column vectors.
% SKIP_SECONDS = IMPORTFILE(FILENAME) Reads data from text file FILENAME
% for the default selection.
%
% SKIP_SECONDS = IMPORTFILE(FILENAME, STARTROW, ENDROW) Reads data from
% ... |
31d75cc5ede02f7d42ef0e1ae1636a97e29e855cbb1c34bd46ac4b2e9b83495f | MATLAB | 1,993 | 65 | function TR_RecordDisplay(app, displayH)
Group = app.Experiment.Groups(app.IDs.Group).Group;
Record = Group.Records(app.IDs.Record).Record;
% Ttotal = Param.Ttotal; % total duration (sec)
dT = app.Experiment.Specs.Display.Parameters.dT; % interval between display points (sec)
Window = app.Experiment.Specs.Analysis.Pa... |
a7fa38fb0ff97da47ec9dadded2313ca813b01bfe45416bbb79ba7388b85e996 | MATLAB | 1,993 | 61 | % wrapper for epoching pupil data
% uses PSPM toolbox
% https://github.com/bachlab/PsPM
% version used here: PsPM_v6.0.0
% Ulrike Horn
% uhorn@cbs.mpg.de
% adapted by Alice Dabbagh (dabbagh@cbs.mpg.de)
close all
clear
addpath '/data/pt_02306/main/code/github/pain-reliability-spinalcord/1_preprocessing/'
addpath '/data... |
bdcb15448dc044bff3a575539b827df2a81f4852dc4f266c67ceb4f3e000a3dc | MATLAB | 1,993 | 60 | % this script create a 3-D scatter plot showing different pattern of the
% dynamics, including ON-ON, OFF-ON, OFF-OFF and ON-OFF
% 3 dimensions are: DeltaE (x), DeltaI (y), and Isens(z)
rootFolder = "figure_200_0.02/";
% ON-ON
data = readFilename(rootFolder+"agree/*_*_*_*_*_*.png",'%f_%f_%f_%f_%f_%f');
data( all(~data,... |
d7775d41a19c96393eb7350680fbc23b1e1e16cf7b692da6777dea33320d802b | MATLAB | 1,993 | 58 | function [quality] = ml_cai_quality_all_two_led(t, x1, x2, varargin)
p = inputParser;
p.CaseSensitive = false;
check_t = @(x) isnumeric(x);
addRequired(p, 't', check_t);
check_x1 = @(x) size(x,2) == 2 && isnumeric(x);
addRequired(p,'x1', check_x1);
check_x2 = @(x) size(x,2) =... |
04c7e634c35586e2739330e2c41606d1e83cd1c5113e227a07c535a5db506525 | MATLAB | 1,994 | 77 |
load('sampledata_activity')
for s = 1:2
for i = 1:56
trial_number(i,1) = size(rawdata4.ch(i).data,1)
end
clear data
for ch = s*28-27:s*28
data.label{ch+28-s*28,1} = num2str(ch);
end
for t = 1:70
for ch = s*28-27:s*28
data.trial{1,t}(ch+28-s*28,:... |
707750af0ed1f9cc079381733c8a3e1ced7f4bdc8ae05a0d80663528d31ce246 | MATLAB | 1,994 | 54 | % bootstrap average EEG-fMRI correlation and calculate confidence intervals
% (for Figure 2 and Figure 3)
%
% 2024-01-08 Jonathan Wirsich
[confs, confs_label, groups, eeg_conn_types, bands, atlases, serialized_path] = init_serialized_conf_tle();
for atl=1:1
%load connectomes
[allgroup_mean_fMRI, allgroup_mea... |
a090df3a9778a95602c32f4233d40cfb869c99351a93a44927a225f7630afa1f | MATLAB | 1,994 | 69 | %{
Maxwell Gagnon - September 2019
- This function finds all BEHAVIOR Maestro files in a directory, opens them, and saves
them as a .mat file.
- .mat files are easier to work with than the BEHAVIOR Maestro files.
%}
%% Set up
clear;clc; close all; fclose('all');
expmtDataFolder = 'G:\My Drive\Expmt Data\Max\Climbing ... |
b0695a88ae4581302c7fe3a3364ac1f8af8aa99be2c0a02c3180ea920262fdfa | MATLAB | 1,996 | 83 | % temporary script for plotting ephys data with FicTrac and visual stimuli
%
% 4/8/21
% some constants
fictracParams.dsf = 20; % downsample to 1000 Hz;
fictracParams.filtParams.padLen = int32(200);
fictracParams.filtParams.sigmaPos = int32(100); % 100 ms
fictracParams.filtParams.sigmaVel = int32(50); % 50 ms
BALL_DI... |
2e83b4cf5cb747a21360ed6354c02dc617387b3d28c2714f3e299017a2b63269 | MATLAB | 1,998 | 46 | %% Author: Jiri van Bergen and Xu Li
% Affiliation: Radiology @ JHU - Kirby Center
% Contact via xuli@mri.jhu.edu
% Updated by Xu Li, 2019-06-20
% Updated by Xu Li, 2021-06-23, called in cluster version
%% Show Image info in GUI or print
% Format
Params.voxSize = single(Params.voxSize);
TextDimensions = s... |
6187af69ccad999cace4b92eefe025dae4302d81b9a51f3095ee2d4634b711c4 | MATLAB | 1,998 | 55 | function propValue = TDMS_getPropValue(fid,propDataType,UTC_DIFF,DATE_STR_FORMAT)
%TDMS_getPropValue Returns the property value given the Labview DataType
%
% propValue = TDMS_getPropValue(fid,propDataType,UTC_DIFF)
%
% See Also: TDMS_getDataTypeName
SECONDS_IN_DAY = 86400;
CONV_FACTOR = 695422; %dat... |
c7403cc5279171cc85a23298eafd986c2a7452184f8226e7baee70b84b2f418d | MATLAB | 1,998 | 57 | function vid = setROI(vid, img1, img2,res, boxsize, boxoffset)
%% Display snapshot
figure(1);
set(gcf, 'Position', get(0,'Screensize')); % Maximize figure.
h(1) = subplot(1,2,1);
imshow(img1); title('Camera Left')
text(-60,-82,'Please do it on the camera Left:','Color','red','FontSize',15)
text(-53,-60,'First: Click a... |
48047179a0c71c3bf2c45849799c7e990751172ce365db1f821d21b9570b8074 | MATLAB | 1,999 | 60 | function write_stl(filename, pnt, tri, nrm);
% WRITE_STL writes a triangulation to an ascii *.stl file, which is a file
% format native to the stereolithography CAD software created by 3D Systems.
%
% Use as
% write_stl(filename, pnt, tri, nrm)
% where nrm refers to the triangle normals.
%
% See also READ_STL
% C... |
8dcd423949dcb54b381211fa2ec408e24e7c0797fb913a907c18355ebd29c6ac | MATLAB | 1,999 | 63 | function est2 = constrainEstToSomas(est,sL)
% est2 = constrainEstToSomas(est,sL)
%
% Function to constrain the est data struct to a subset of profiles
% that represent, for example, somatic components.
%
% 2020 - Adam Charles
tmpSL = false(size(est.estactIdxs));
tmpSL(sL) = true;
%% First: indexing hell
est2.... |
8e47fdc9cb96a3382123abc0d6995369c90a1aa3c19d3b5cbe2223ed95f8b13b | MATLAB | 1,999 | 79 | function sel = vl_clickpoint(V,N,varargin)
% VL_CLICKPOINT Select a point by clicking
% SEL = VL_CLICKPOINT(V) let the user vl_click a point in the current
% figure and returns the index v of the closest point (in Euclidean
% norm) in the collection V. The 2xK matrix V has a a column for
% each point.
%
% Th... |
598102e719d9fb7a8d250315cdf34bbd503389ecbf0d3eb581e1444934692de6 | MATLAB | 2,000 | 91 | %% OpenMEEG for MEG from Fieldtrip demo script
%
% This script provides an example of how to compute an MEG leadfield with
% OpenMEEG in the Fieldtrip toolbox.
%
% This demo uses spherical head models and compares the OpenMEEG result
% with the solution provided by the solution from Nolte.
%% Set the radius and conduc... |
723d84ede730801ef87978e086d8cbe3255a2f4a6e6fefe971042089f65c7d5e | MATLAB | 2,000 | 81 | %% setup
clear;clc;close all;clear sound
%C = IBWconnect('Z:\1_Maxwell_Gagnon\ProjectData_Sriram\Firing_spike_count');
%load('march8th.mat')
sampleRateEYE = 1000;
startEYE = 2022000+ 30000;
additionEYE = 10*4;
dispLenEYE = 1000*7 - additionEYE;
sampleRateSPIKE = 50000;
ORIGINALstartSPIKE = 101100000+ 1500000;
startS... |
f48f6d433c6cce6e7f8a1997f29cb705f5ee34f72ab594eebb5e42c09acdbb0b | MATLAB | 2,000 | 80 | function motion_estimate(DATA,ROI,AddInfo)
% MOTION_ESTIMATE - Estimate motion using center of mass
% (this is an Aedes plugin)
%
% Synopsis:
%
% Description:
%
% Examples:
%
% See also:
%
% This function is a part of Aedes - A graphical tool for analyzing
% medical images
%
% Copyright (C) 2006 Juha-Pekka Niskane... |
5a74770ce14df37c72ba3cf01264ec6bd6a8040b3fa794f014545cc8dec2c32e | MATLAB | 2,003 | 53 | %{
Copyright (C) Cambridge Electronic Design Limited 2014
Author: James Thompson
Web: www.ced.co.uk email: james@ced.co.uk, softhelp@ced.co.uk
This file is part of CEDS64ML, a MATLAB interface to the SON64 library.
CEDS64ML is free software: you can redistribute it and/or modify
it under the t... |
5df53e1031639c3cc9fd91c4613580a6f01e24377ab6799a43f02ededd57d1e0 | MATLAB | 2,004 | 75 | function dataSize = TDMS_getDataSize(dataType)
%TDMS_getDataSize Returns data size in bytes
%
% This function is used to return the size of raw data for predicting the
% # of chunks of raw data
%
% dataSize = TDMS_getDataSize(dataType)
%
% INPUTS
% =================
% dataType : Labview dataType
... |
f61039a754129aadc9037fcae65fa72a9ca3acf71229aca4f1b715595341de53 | MATLAB | 2,004 | 45 | function mlgp_compute_bfo_general_average(obj, rotDeg, group)
numAngles = 360 / rotDeg;
bfo_session_prob_mean = zeros(obj.Experiment.getNumSessions(), numAngles);
bfo_session_prob_std = zeros(obj.Experiment.getNumSessions(), numAngles);
bfo_session_corr_mean = zeros(obj.Experiment.getNumSessions()... |
723337e470af6ddf6ea041386f01c62909238dc32ccedff7171d756b9d37a813 | MATLAB | 2,009 | 44 | function subIm = subIndexImages(cnmf,suite2p, pcaica, est, Idxs)
if isempty(Idxs)
Idxs = 1;
end
TMP_sz = [500,500,1];
subIm.Idxs = Idxs(:);
subIm.cnmfIdx = cnmf.pairs(any(bsxfun(@eq, cnmf.pairs(:,1), subIm.Idxs.'),2),2);
% CNMF - strongly paired components
subIm.cnmf = cnmf.compSpatial(:,:,subIm.cnmfI... |
e87e1503151b7ed97aff06b6566759decf6be25f32fea44e9419d2ef6c6cce5f | MATLAB | 2,009 | 73 | function [varargout]=SONGetExtraData(varargin)
% SONGETEXTRADATA reads or writes the extra data area of a SON file
%
% [ERR, BUFFER]=SONGETEXTRADATA(FH, N, DATATYPE, BYTEOFFSET, FLAG)
% or
% ERR=SONGETEXTRADATA(FH, BUFFER, BYTEOFFSET, FLAG)
%
% INPUTS: FH the SON file handle
% N the number of ite... |
1abf9838b95e2ebf2925831bfa71fb87586f223f83ec44914b7485c87ee9637f | MATLAB | 2,010 | 54 | function f = createTemporalIRFs_sustained_transient(x)
% Function to create temporal IRFs for sustained and transient channel:
% Sustained is a monophasic gamma function with parameters k, tau, n.
% ON- and OFF_Transient impulse response functions are difference between
% two-gamma functions, which are identical... |
f06fcad0323d064c65f55136b0a79fe65c9c2adab7383e98b883e3b35d5aa2cc | MATLAB | 2,010 | 80 | function o = mayostruc
% Create a data structure describing Analyze headers
% _______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
%
% $Id: mayostruc.m 8776 2013-11-14 09:04:48Z roboos $
persistent org;
if ~isempty(org),
o = org;
... |
706c5eea1ec70859a89fc0dd7fc78ae3a611b5ade1c6d9a8f403e9a4aed5b93a | MATLAB | 2,013 | 85 | dimension = 128;
numData = 10000;
numClusters = 100;
numIterations = 5;
numIterationsKM = 3;
X = rand(dimension,numData);
numTrials = 2;
lls = zeros(numTrials,2);
for trial = 1:numTrials
% kmeans initialization
startKMEANS = tic;
[initMeans, assignments] = vl_kmeans(X, numClusters, ...
'verbose', ...
'multit... |
3fc9c762cdb29ace0fc155c8debd264aaaed30fa0ed78e64b9512dc90e96316c | MATLAB | 2,014 | 79 |
function my_epoch_model_cache(opts, epoch, exp_info, net_config)
if ~opts.do_cache_model
return;
end
model_cache_epoch_idxes=opts.model_cache_epoch_idxes;
model_cache_epoch_idxes_snapshot=opts.model_cache_epoch_idxes_snapshot;
do_cache=false;
if any(epoch==model_cach... |
5ef85396ec19157b308da03a62432d8a6787cf7b308a34bd57b811fbf2e3caf7 | MATLAB | 2,014 | 70 | % Function File: [Y] = sma (y, n, method, correction)
%
% Calculates the Simple Moving Average (SMA) of y-values for 2n+1
% number of points. The method variable must be specified as 'mean'
% or 'median'. The algorithm uses a bounce end-effect correction,
% which can be switched 'on' or 'off'. ... |
4cce42692d163feec33d51bade8b5fda717283ff50034222c44be83c862b4896 | MATLAB | 2,015 | 52 |
% function out_struct = read_figS6_results_from_xlsx(fname, sheetName)
% reads data necessary to create figure S6 from .xlsx. All required
% variables are fields of out_struct
% Inputs:
% fname (str): Name including path of the .xlsx document.
% sheetName (str): Name of the worksheet within fname.
%
... |
995816bcf19447bbcd435ede8e04780cb14d9e4046c7dfc56b41a98f136509f1 | MATLAB | 2,015 | 66 | function [tap] = hanning(n, str)
%HANNING Hanning window.
% HANNING(N) returns the N-point symmetric Hanning window in a column
% vector. Note that the first and last zero-weighted window samples
% are not included.
%
% HANNING(N,'symmetric') returns the same result as HANNING(N).
%
% HANNING(N,'periodic'... |
acbb8960dbb2146c17cb642eaa1526d199098147b8f79cb9f7906806ac93e195 | MATLAB | 2,015 | 41 | classdef CBIG_IndCBM_unit_test < matlab.unittest.TestCase
% Written by XUE Aihuiping and CBIG under MIT license: https://github.com/ThomasYeoLab/CBIG/blob/master/LICENSE.md
methods (Test)
function test_example(testCase)
% create output folder
CBIG_CODE_DIR = getenv('CBIG_CODE_DIR');... |
018779dce208e54ac9aa2fa74bdd868b23fbcc9a5f2d0f250f375f2c4af01aed | MATLAB | 2,016 | 73 | % getTaskVar.m
%
% usage: val = getTaskVar(task,varname,trialNum)
% by: justin gardner
% date: 11/09/16
% purpose: Gets the value of a variable from the task.
%
% e.g.: Get the last trial value for parameter, myVariable
% val = getTaskVar(task,'myVariable',-1);
%
% e.g.: Ge... |
779ada39e3366bb6c2d3a25edbcf4d5c32c1c4af59d5c453f7188050544de499 | MATLAB | 2,016 | 67 | function write_neuralynx_nts(filename, nts);
% WRITE_NEURALYNX_NTS writes spike timestamps to a NTS file
%
% Use as
% write_neuralynx_nts(filename, nts)
%
% See also READ_NEURALYNX_NTS
% Copyright (C) 2007, Robert Oostenveld
%
% This file is part of FieldTrip, see http://www.ru.nl/neuroimaging/fieldtrip
% for the d... |
caf72e0dae44d476a5ca505932491e55e3d41907248df570a8478011c57ded21 | MATLAB | 2,018 | 66 | function PLOT_linearityComparison2(mag_aligned, vid_aligned, sacStarts, sacStops, keep, mag_all, mag_chunks)
numSacs = length(sacStarts);
numOnEach= 2;
colors = {'b', 'r'};
numSubs = 6;
numSubsDim = [2, 3];
figCount = ceil(numSacs / numSubs);
q = 1;
% each figure contians 9 subplots
for i = 1:figCount
figure()... |
30420a2f7d76564048b487507ea47c809c4e4ff275484419ffe57e40fafa8f0e | MATLAB | 2,019 | 72 | function varargout = calceyeangle(results, theta)
%% Angle between two cameras in degree 5/22 DONT CHANGE
if ~exist('theta','var')
theta = 39.8;
end
%% if input is a dat, convert to old results format
if isa(results,'dat')
datflag = 1;
R = results;
results= [];
results.pupil1 = [datchandata(R,'p... |
2f494ef3d4d572411689acf48fb46f9f35eb86dac634259fa40425960f2e06f8 | MATLAB | 2,021 | 79 | function [clean_data,info] = find_homogeneous_FR_rows(data)
% find_homogeneous_FR_rows.m
% data: assumes nTr x nMS structure
minSpkTr = 2;
outlierFac = 3;
FRs = mean(data,2)*1000;
threshIX = FRs >= minSpkTr;
threshRows = find(threshIX);
gmmData = data(threshIX,:);
gmmFRs = FRs(threshIX);
nGRows = size(gmmData,1);
... |
c0695ef5e998ea34a03e557dc789a1d44832cf6d02956ed9f03dc509402e8269 | MATLAB | 2,021 | 44 | function trace_mat = expression_variation(trace_mat, p_off, min_mod)
% function trace_mat = expression_variation(trace_mat, p_off, min_red)
%
% Function to take a matrix of traces (N neurons by T time-points) and to
% modulate each neuron's time trace by a value that is 0 with probability
% p_off (that cell has no ex... |
cb3ddb5fdd84244ceba92a89b1066269bd843c72d172e8e94950120e9d7aa865 | MATLAB | 2,022 | 59 | % wrapper for epoching pupil data
% for predcod behav first replication dataset
% uses PSPM toolbox
% https://github.com/bachlab/PsPM
% version used here: PsPM_v6.0.0
% Ulrike Horn
% uhorn@cbs.mpg.de
% adapted by Alice Dabbagh (dabbagh@cbs.mpg.de)
close all
clear
addpath '/data/pt_02306/main/code/github/pain-reliabili... |
fea7c364806c79a535dbd30ebf4ae57fba93d6ac161fa34a2b74c0e3ab67b8d7 | MATLAB | 2,023 | 53 | % mglBindTexture.m
%
% $Id:$
% usage: mglBindTexture(tex,newdata)
% by: justin gardner
% date: 02/01/12
% purpose: This implements a faster way to change textures on the fly.
% For example, if you want to just change the alpha of an
% image it can be 4x faster than ... |
3763561956483f77e1d6773f8fdee9b11ce8990a5296fee7a84719d8ced7ee62 | MATLAB | 2,024 | 61 | function sig=subtract_refBDH(time,sig,sig_control,savename,subtract_method)
exptname=strsplit(savename,'\'); exptname=exptname{1};
%subtract_method=2
% subraction of sig & control
% subtract_method='MinResid' use bestfit model
% subtract_method='Subtract' just subtract them
% subtract_met... |
516208fb968af54fdeca585dc27aa1ffcf612c91ce90aeb5fdcff5af81b64853 | MATLAB | 2,024 | 53 | function [col1, col2, col3, col4] = read_neuromag_eve(filename)
% READ_NEUROMAG_EVE imports events from the *.eve marker file that can accompany a
% *.fif dataset.
%
% Use as
% [smp, tim, val3, val4] = read_neuromag_eve(filename)
%
% Column one is the sample number. Column two is the time. Column three is is most
% c... |
b8c96189670d7a156926a5d6acf2483dd8691f4afca7512fbae844cb1c0ba8c3 | MATLAB | 2,024 | 67 | % updatePDataStepParams.m
%
% Quick script to update legSteps struct after update to
% computeStepParameters()
%
% CREATED: 2/13/23 - HHY
%
% prompt user to select pData files
[pDataFNames, pDataPath] = uigetfile('*.mat', 'Select pData files', ...
pDataDir(), 'MultiSelect', 'on');
% if only 1 pData file selected... |
cad3168a6449efb18185cae0911575f65159888f7f1683205415bd18b3846699 | MATLAB | 2,025 | 41 | function test_tracker_with_alternative_input()
this_script_folder_name = fileparts(mfilename('fullpath')) ;
flytracker_folder_path = fileparts(this_script_folder_name) ;
flydisco_folder_path = fileparts(flytracker_folder_path) ;
flytracker_test_files_folder_path = fullfile(flydisco_folder_path, 'flytra... |
0376c8dfa276b8121f94b6478875e2036261ff0d1a52aed03b8276968ee74eab | MATLAB | 2,026 | 55 | function [dat] = read_bucn_nirsdata(filename, hdr, begsample, endsample, chanindx)
% READ_BUCN_NIRSDATA reads ASCII-formatted NIRS data acquired with the
% UCL-BIRKBECK machine and postprocessed by the Paris group. The first line
% contains the channel labels and the rest of the file contains per line a
% time sample.... |
27cc5448588de62050c0e5d5c7aabedf96b72346a67fa14edda26b1bc1d3dd84 | MATLAB | 2,026 | 40 | % SONGETEXTMARKDATA returns the timings, marker values and extra data
% for an AdcMark, RealMark or TextMark channel
%
% Implemented through SONGetExtMarkData.dll
%
% [npoints, times, markers, extra]=
% SONGETEXTMARKDATA(fh, chan, maxpoints, stime, etime{, filtermask})
%
% INPUTS: FH = file handle
% ... |
3c0619d8ac9f6b9eb1d1623ae738a46291fa5493177e675a7a908f75039d031a | MATLAB | 2,027 | 81 | function [] = Fig01_Example_dPR1_Frames()
% Code for plotting example frames of a recording from dPR1 in Fig. 1g.
Target_FileID = 2;
Margin = 10;
figure('Position',[100 100 1600 1200])
%% behavior
TargetStim = 1;
nFrames_10s = 71; % 71.0443 frames
nFrames_1s = 7;
%% imaging
nTrials = 6;
d1 = 256; % Y
d2 = 256; % X
... |
038a54512c37dc4acea713840248f7ef5d0ca7a9478c884870482358e91df743 | MATLAB | 2,028 | 56 | function split_images(stg,prf)
% reads the image files indicated in profile and splits them into various
% ROIs indicated in the settings for all observers.
%
%
% SPLIT_IMAGES(STG,PRF) get original pre-processed images indicated in the
% PRF variable and extracts the data for each ROI of a desired atlas,both
... |
233b33b0f8fc48cc838c3ebbf260d525141a6126be3bff258395bf7eb29c9fea | MATLAB | 2,028 | 52 | function compactify_sfp( obj, session, trial )
% Load the standard SFP used for CellReg
fn = fullfile(trial.getAnalysisDirectory(), sprintf('%s.mat', obj.Config.cell_registration.spatialFootprintFilenamePrefix));
if ~isfile(fn)
fn = fullfile(trial.getAnalysisDirectory(), 'sfp.mat');
if ~isfi... |
8573b9472cd99461d3f5c56af0f2c802fe7cb044d78aabcba34581a1d9a98c97 | MATLAB | 2,028 | 60 | % clear;
addpath(genpath('.'))
addpath(genpath(fullfile('..','ANE')))
%%
dir_video=fullfile('..','data','data_TENASPIS','added_refined_masks');
list_Exp_ID={'Mouse_1K', 'Mouse_2K', 'Mouse_3K', 'Mouse_4K', ...
'Mouse_1M', 'Mouse_2M', 'Mouse_3M', 'Mouse_4M'};
num_Exp = length(list_Exp_ID);
eid = 1;
Exp_ID = ... |
c070e384dfaab317ee3f30119137ba6553f7a88bc3efd2bc4e8818e57b038a8a | MATLAB | 2,028 | 41 | clear
close all
file=dir('ACC*uncertain*.mat');
k=1;
for jj=1:length(file)
load(file(jj).name)
n=length(outcome);
n1=fix(n*0.33);n2=fix(n*0.67);
gotrial{1}=find(outcome(1:n1,1)==1|outcome(1:n1,1)==2|outcome(1:n1,1)==5);
gotrial{2}=find(outcome(n1+1:n2,1)==1|outcome(n1+1:n2,1)==2|outcome(n1... |
67445462314a0ee263ea8248e9d7f0c037a89dd3187b5da1f4e570a17aa59e91 | MATLAB | 2,029 | 53 | function [shiftedLFP] = shift_LFP_data(lfpdata, lfpFS, shifts, shiftsFS, xcoords, ycoords, smoothBetweenBlocks,sigmaMask)
%% Adapted from kilosort2.5 shift_batch_on_disk.m
%% by Richard Hardstone
numChans = size(lfpdata,1);
numSamps = size(lfpdata,2);
sampsPerBlock = lfpFS / shiftsFS; %% Make sure that realignment... |
2306cbfb5fff942601702917fb4916d4a8acbefa27696ff31444d32b91867d0c | MATLAB | 2,030 | 68 | % convertImgSeqToVideo.m
%
% Function that takes in path to a folder containing a sequence of images
% and converts it to video of the specified type saved one level up from
% the image sequence.
%
% NOTE: currently doesn't work correctly on default output of Point Gray
% Spinnaker b/c file numbers aren't zero padde... |
a73f80268ea6fb671abaaa301072aacbb03ba38594c65a6453296df787269b4b | MATLAB | 2,030 | 56 | function dt = datatypes
% Datatype
% _______________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
%
% $Id: datatypes.m 8776 2013-11-14 09:04:48Z roboos $
persistent dtype
if isempty(dtype),
t = true;
f = false;
table = {...
0 ... |
bbf6435e80607af22fb95ffa5581d88629b7053849054c1f63a18212e9d13213 | MATLAB | 2,030 | 85 | % figS1_RP_no_oscil.m
% generates Fig. S1 using stored values
%%
clear all;
close all;
clc;
%% addpath if not added yet
% assumes script run within local directory
scriptdirs = {'../../plot';'../../helper_functions'};
addpath(scriptdirs{:})
datadir = pwd;
datafile = 'fig1_no_oscil_ex_data.mat';
datapath = fullfile(... |
4665f237bd95f2d3e75fa46391cc75b7c1ddf37052db5cbf0484de2d20f50d50 | MATLAB | 2,031 | 64 | % mglMoveWindow.m
%
% $Id$
% usage: mglMoveWindow(leftPos, topPos, socketInfo)
% by: Christopher Broussard
% date: 10/23/07
% purpose: Moves the current AGL window with the left edge of the window
% at 'leftPos', the top edge at 'topPos'.
%
% % move the primary window
% ... |
ca5184feef33b5f27675ca24b9d51bec37dd7c2734a0174eb9675a61719f170a | MATLAB | 2,031 | 63 | % preprocessLegVid.m
%
% Function for preprocessing raw voltage signals from the leg tracking
% camera (strobe signal with falling edge as frame start). Extracts leg
% video frame times. Checks that number of frames camera says it has
% captured matches number of trigger pulses sent. Also, saves full path
% to le... |
f01a4307513b7a2d489254a8af15a561cf5a4266f8f753933279e3e4e67634dd | MATLAB | 2,031 | 49 | % mglContextCloseAll: Close all stashed and active mgl contexts.
%
% $Id$
% usage: [stashedNames, activeName] = mglContextCloseAll()
% by: ben heasly
% date: 09/07/2022
% copyright: (c) 2006 Justin Gardner, Jonas Larsson (GPL see mgl/COPYING)
% purpose: Close all stashed and active mgl con... |
3b94b8db249a6bb41336bcecbfdfaf090acc476c316084154e0f7be0d303ee24 | MATLAB | 2,033 | 63 | % ephysRecording.m
%
% Trial Type Function
% Only records ephys channels, no current/voltage injection
%
% INPUTS:
% settings - struct of ephys setup settings, from ephysSettings()
% duration - duration of trial, in seconds
%
% OUTPUTS:
% rawData - raw data measured by DAQ, matrix where each column is data
% ... |
4731084bde37ee31aea51f6dfffe359c8c1af01ef155b1eec8fcff1414999206 | MATLAB | 2,033 | 57 | %{
Copyright (C) Cambridge Electronic Design Limited 2014
Author: James Thompson
Web: www.ced.co.uk email: james@ced.co.uk, softhelp@ced.co.uk
This file is part of CEDS64ML, a MATLAB interface to the SON64 library.
CEDS64ML is free software: you can redistribute it and/or modify
it under the t... |
e8b2b3ced57357b195f2f5c2ad58e141223b1de4a70fb0c15b8b185520b6d093 | MATLAB | 2,033 | 57 | function krn = spm_smoothkern(fwhm,x,t)
% Generate a Gaussian smoothing kernel
% FORMAT krn = smoothing_kernel(fwhm,x,t)
% fwhm - full width at half maximum
% x - position
% t - either 0 (nearest neighbour) or 1 (linear).
% if only two arguments are passed, then a value
% of one ... |
0e069203efcf2d428663e2c54d47bed138637126891917ac0a86d3b1e255c2ed | MATLAB | 2,034 | 54 | % Marc Normandin, Muzzio Lab, Psychological & Brain Sciences, University of Iowa, 2024
function [T] = compute_per_day_cell_averaged_rate_difference_matrix(DaysToSessions, RateMatrices, perCellNormalizationMethod)
uniqueDays = unique(DaysToSessions.dayNum);
numDays = length(uniqueDays);
T = [];
k = ... |
89e28c11d100246f43193195cfde0522bcd7568b87365bf6278fead0ace6284b | MATLAB | 2,034 | 56 | function[signals] = applyFindPeaks(varargin);
p = inputParser;
errorStr = 'Oh no! There is something wrong with your Thresholds!';
validationFcn = @(x) assert(isnumeric(x),errorStr);
addParameter(p,'PHthreshold', 'Wrong',validationFcn);
addParameter(p,'MPPthreshold', 'Wrong',validationFcn);
addParameter(p,'Fil... |
e39899b6b593ab4761882e55130887c8fb4adef61984f5bf75016ee7b2a520e3 | MATLAB | 2,034 | 51 | function [path_name, file_base, file_fmt] = data_info
% Select datasets to process
% Jinghao Lu 01/12/2016
% [file_name_tmp, path_name] = uigetfile({'*.tif'; '*.tiff'; '*.avi'}, 'Select coordinates file', 'MultiSelect', 'on');
[file_name_tmp, path_name] = uigetfile('*', 'Select imaging file', 'MultiSelect', ... |
75df18925422bd5af5ac2bd242687fe2680bc7a16de6453c763723b56e7ca7f6 | MATLAB | 2,035 | 59 | function zipPath = zipFolder(dirPath)
% Zip the recognised preview files in a folder into a temporary .zip
%
% function zipPath = webupload.zipFolder(dirPath)
%
% Purpose
% Only files the server keeps (see webupload.selectUploadable) are included, and the
% archive is flat: subfolders are ig... |
765d27f4ec7791676512735894cb6c54430508193e74e23dbc97058fa52f5161 | MATLAB | 2,035 | 62 | % saveAllMoveCondData.m
%
% Script to generate and save all movement conditioned, paired imaging and
% fictrac data for flies that meet selection criteria
%
% Selects flies/trials using metadata spreadsheet and returnSelectMetaDat()
% Runs moveCondPairData() on all selected trials and saves data
%
% UPDATED:
% 9/13... |
4c043ad8ee49db52448e95b51c64f558010fd4bb737da1f7fd641f3b9033b981 | MATLAB | 2,036 | 50 | function [] = E3_Beta_Comparison_bootstrp(badSubs,slctd_strct,append,n_BS)
% baSubs = code of bad subjects ([23,28] for now)
% slctd_strct = which structures to do comarison on ([1,2,4]; %Th, CN and GP: selected based
% on best model on all conditions combined)
% appe... |
af6315d31d0b1718bb10f48a0007dec57f2b677950b4011ae042fd993f0c4019 | MATLAB | 2,036 | 77 | <<<<<<< HEAD
function [gmsVector, gmsVectorREJ, NGRA, REJngra] = gms2Vec(gms, matching_type)
% initialize vector
gmsVector = [];
gmsVectorREJ = [];
k = 0;
w = 0;
for z = 1:size(gms,2) % for each ID
% ciclo tutta la matrice per creare l'opportuno vettore
for i = 1:size(gms{z},1)
% imposto J per saltar... |
4c592fb85403c848ef645862b29e347ade3a8e10ab387b117bc9e4a0115af60e | MATLAB | 2,038 | 61 | function handle = ternary_grid_lines( handle, varargin )
%ternary_grid_lines plots a set of grid lines for all three axes
%
% grid_pnts is structure array grid_pnts(1:3).values(1:N), where N
% can vary for each axis. Ticklinelength gives any extra length on the
% base axis used for ticks
%
%% Check... |
339139b017a1236d0deff12cc04dba9da6b3168121abca7dfc863c489a4e881e | MATLAB | 2,040 | 47 | function[interval, start]=SONGetSampleInterval(fid,chan)
% SONGETSAMPLEINTERVAL returns the sampling interval in microseconds
% on a waveform data channel in a SON file, i.e. the reciprocal of the
% sampling rate for the channel, together with the time of the first sample
%
% [INTERVAL{, START}]=SONGETSAMPLEINTERVAL(F... |
e5a5dd51767fc4fe97ae25cbaa349f905259b2ad14b9fd06129f593321ef4e6e | MATLAB | 2,040 | 83 | function[traces_figure,smoothed_dff]=plot_traces(dff,deconv,ctype,velocity,select_time,t)
%%
%DFF/DECONV/CTYPE MUST BE SORTED BY CELLTYPE
dff=normr(dff);
deconv= normr(deconv)./5;
numframes=size(dff,2);
smoothed_dff=movmean(dff,10,2);
velocity=normr(velocity)*15;
velocity=movmean(velocity,30);
%% SELECTED TIME
... |
314d9048b6a019c1c1c5c9514af90d830e11a11d7dd567ad25dedf026e326304 | MATLAB | 2,041 | 59 | function [eyevelH_offset, eyevelH_rel_phase, eyevelH_amp, eyeHgain] = VOR_SineFit_Single(freq, sampleRate, eyeVel, headVel, drumVel)
% Segment data to current time segment
%dataseg = datseg(data, [tstart tstop]);
% Read in data
%if ~isempty(strfind([dataseg.chanlabel],'htvel'))
% drumvel = datchandata(data... |
3428bf7de08af20572676615cf941de31a317e9ab0d1a566bf3f6083760b811c | MATLAB | 2,041 | 54 | % mglMetalDots.m
%
% $Id$
% usage: results = mglMetalDots(xyz, rgba, wh, shape, border)
% by: Benjamin heasly
% date: 03/16/2022
% copyright: (c) 2006 Justin Gardner, Jonas Larsson (GPL see mgl/COPYING)
% purpose: Draw "vectorized" dots with xyz, rgba, width and height.
% usage: resul... |
6a923c62a37c759160dbfbf07976ce4bfd2552ad6f14752be2f87e0474233e9e | MATLAB | 2,041 | 61 | function bnd = read_asa_bnd(fn);
% READ_ASA_BND reads an ASA boundary triangulation file
% converting the units of the vertices to mm
% Copyright (C) 2002, Robert Oostenveld
%
% This file is part of FieldTrip, see http://www.ru.nl/neuroimaging/fieldtrip
% for the documentation and details.
%
% FieldTrip is free so... |
a9bb9bbb9ac794766278fcb4e0aa1d22c3c2fbe22baacb1a84e6eb0833aa414c | MATLAB | 2,041 | 94 | function boundary = CalculateBoundarySize(aa, bb)
% boundary = CalculateBoundarySize(a,b) calculates the size of the boundary
% between blob a and blob b
%
% Faster version
% Make sure a is the smaller blob
if (aa.borderSize > bb.borderSize)
a = bb;
b = aa;
else
a = aa;
b = bb;
end
% Ge... |
cee5c8ac6e538193bd6062d4186a26974e46a42034f810097cba403730f2bd29 | MATLAB | 2,043 | 78 | % mglTestGlassDots: an automated and/or interactive test for rendering.
%
% usage: mglTestGlassDots(isInteractive)
% by: Benjamin Heasly
% date: 03/10/2022
% copyright: (c) 2006 Justin Gardner, Jonas Larsson (GPL see mgl/COPYING)
% purpose: Test rendering a whole bunch of dots.
% usage:
% ... |
ebe1282de9cd146ecbf101e09c65361cd6e8194febe644ca3f170e4853332154 | MATLAB | 2,043 | 52 | % writetrace.m
%
% $Id$
% usage: myscreen = writetrace(data,tracenum,myscreen,force)
% by: justin gardner
% date: 02/17/05
% copyright: (c) 2006 Justin Gardner (GPL see mgl/COPYING)
% purpose: function for experiments that writes data
% to a trace. because saving data in a trac... |
d0b36c4c2a70ba180273c12c61e096125face3009b686f727fc6ce111bf1057e | MATLAB | 2,044 | 59 | close all
clear all
clc
%recordingsParentFolder = 'R:\chengs_task_2c\data\minimice\feature_rich\CMG087_CA1\recordings_sep';
%recordingsParentFolder = 'T:\Minimice\feature_rich\CMG129_CA1\recordings_sep';
%analysisParentFolder = strrep(recordingsParentFolder, 'recordings', 'analysis');
config = mulana_json_read(fullfil... |
b774a31232882e2d0bc518e8ec8a0b591c392a5b45ddc08c735b1364bead54c0 | MATLAB | 2,045 | 65 | % Marc Normandin, Muzzio Lab, Psychological & Brain Sciences, University of Iowa, 2024
% This makes figure S12B
close all
clear all
clc
% Paths
run('../load_figure_config.m')
INPUT_FOLDER = CHENGS_TASK_2C_FIGURES_CONFIG.DATA_FOLDER;
OUTPUT_FOLDER = CHENGS_TASK_2C_FIGURES_CONFIG.FIGURE_OUTPUT_FOLDER;
if ~exist(OUTPUT_F... |
cbd255a874a42e76ab4cc8578d88b9579df22809790977e0bae938c2c848b8b7 | MATLAB | 2,048 | 62 | function results = vl_test_dsift(varargin)
% VL_TEST_DSIFT
vl_test_init ;
function s = setup()
I = im2double(imread(fullfile(vl_root,'data','spots.jpg'))) ;
s.I = rgb2gray(single(I)) ;
function test_fast_slow(s)
binSize = 4 ; % bin size in pixels
magnif = 3 ; % bin size / keypoint scale
scale = binSize... |
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