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#include "ovpCAcquisitionDecoder.h" namespace OpenViBE { namespace Plugins { namespace StreamCodecs { CAcquisitionDecoder::CAcquisitionDecoder() {} // ________________________________________________________________________________________________________________ // bool CAcquisitionDecoder::initialize() { CEBM...
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///------------------------------------------------------------------------------------------------- /// /// \file CMatrixClassifierFgMDMRT.cpp /// \brief Class implementation of Minimum Distance to Mean with geodesic filtering (FgMDM) Classifier RT (adaptation is Real Time Assumed) /// \author Thibaut Monseigne (Inri...
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/******************************************************************************* "A Collection of Useful C++ Classes for Digital Signal Processing" By Vinnie Falco Official project location: https://github.com/vinniefalco/DSPFilters See Documentation.cpp for contact information, notes, and bibliography. ----------...
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///------------------------------------------------------------------------------------------------- /// /// \file CAlgorithmPairwiseDecisionHT.cpp /// \brief Classes implementation for the Algorithm Pairwise Decision HT. /// \author Guillaume Serrière (Inria). /// \version 0.1. /// \copyright Copyright (C) 2022 Inria...
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///------------------------------------------------------------------------------------------------- /// /// \file CBoxAlgorithmSignalResampling.cpp /// \brief Classes implementation for the Box Signal Resampling. /// \author Quentin Barthelemy (Mensia Technologies). /// \version 2.0. /// \copyright Copyright (C) 2022...
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/* * The raw reader expects the data to be formatted as follows * * [START][BLOCK0][BLOCK1][BLOCK2]... * skip parse parse parse ... * * where each block is [===========BLOCKX=================] * is read as [===========dataFrameSize==========] * breaks to [he...
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///------------------------------------------------------------------------------------------------- /// /// \file CBoxAlgorithmCovarianceMatrixToFeatureVector.cpp /// \brief Classes implementation for the box computing the Feature vector with the covariance matrix. /// \author Thibaut Monseigne (Inria). /// \version ...
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/** * SPDX-FileCopyrightText: Inria <tristan.cabel@inria.fr> * SPDX-License-Identifier: AGPL-3.0-only */ #include "parameters/parameterColorGradient.h" #include "parameters/parameterFactory.h" #include <sstream> namespace OpenViBE { namespace Parameters { ParameterColorGradient::ParameterColorGradient(void) : Param...
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/******************** PhyloBayes MPI. Copyright 2010-2013 Nicolas Lartillot, Nicolas Rodrigue, Daniel Stubbs, Jacques Richer. PhyloBayes is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the L...
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/** * SPDX-FileCopyrightText: Inria <florent.leray@inria.fr> * SPDX-License-Identifier: AGPL-3.0-only */ /** * @file DriftCalculator.cpp * @brief Implementation file for the DriftCalculator class. * * This file implements the methods of the `DriftCalculator` class, which calculates * various latency and drift ...
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///------------------------------------------------------------------------------------------------- /// /// \file CBoxAlgorithmFeatureVectorToCovarianceMatrix.cpp /// \brief Classes implementation for the box computing the Feature vector with the covariance matrix. /// \author Thibaut Monseigne (Inria). /// \version ...
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//----------------------------------------------- // Copyright 2010 Wellcome Trust Sanger Institute // Written by Jared Simpson (js18@sanger.ac.uk) // Released under the GPL //----------------------------------------------- // // DPAlignment - Generic class for dynamic programming alignments // #include "DPAlignment.h...
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///------------------------------------------------------------------------------------------------- /// /// \file CBoxAlgorithmCrop.cpp /// \brief Classes implementation for the Box Crop. /// \author Yann Renard (Inria). /// \version 1.0. /// \copyright Copyright (C) 2022 Inria /// /// This program is free software: ...
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//----------------------------------------------- // Copyright 2009 Wellcome Trust Sanger Institute // Written by Jared Simpson (js18@sanger.ac.uk) // Released under the GPL //----------------------------------------------- // // SuffixArray - Generalized suffix array // #include "SuffixArray.h" #include "InverseSuffix...
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///------------------------------------------------------------------------------------------------- /// /// \file CNameValuePairList.cpp /// \brief OpenViBE Pair Name/Value List Class (It handles a hidden map associating string/keys to string/values). /// /// This interface offers functionalities to handle a collect...
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/******************** PhyloBayes MPI. Copyright 2010-2013 Nicolas Lartillot, Nicolas Rodrigue, Daniel Stubbs, Jacques Richer. PhyloBayes is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the L...
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///------------------------------------------------------------------------------------------------- /// /// \file CRendererSlice.cpp /// \copyright Copyright (C) 2022 Inria /// /// This program is free software: you can redistribute it and/or modify /// it under the terms of the GNU Affero General Public License as p...
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/* -*- mode: C++; indent-tabs-mode: nil; -*- * * This file is a part of LEMON, a generic C++ optimization library. * * Copyright (C) 2003-2013 * Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport * (Egervary Research Group on Combinatorial Optimization, EGRES). * * Permission to use, modify and distribut...
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///------------------------------------------------------------------------------------------------- /// /// \file CBoxAlgorithmConfusionMatrix.cpp /// \author Laurent Bonnet (INRIA/IRISA) /// \version 1.0. /// \copyright Copyright (C) 2022 Inria /// /// This program is free software: you can redistribute it and/or mo...
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///----------------------------------------------- // Copyright 2011 Wellcome Trust Sanger Institute // Written by Jared Simpson (js18@sanger.ac.uk) // Released under the GPL //----------------------------------------------- // // ReadCluster - Generate a cluster of overlapping // reads using the FM-index // #include "...
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#include <content/views/fullscreen/view_fullscreen_save_editor.hpp> #include <hex/api/content_registry/pattern_language.hpp> #include <fonts/vscode_icons.hpp> #include <toasts/toast_notification.hpp> #include <popups/popup_question.hpp> #include <wolv/utils/lock.hpp> #include <pl/patterns/pattern.hpp> #include <img...
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///------------------------------------------------------------------------------------------------- /// /// \file CBoxAlgorithmFrequencyBandSelector.cpp /// \brief Classes implementation for the Box Frequency Band Selector. /// \author Yann Renard (Inria). /// \version 1.0. /// \copyright Copyright (C) 2022 Inria ///...
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/******************** PhyloBayes is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. PhyloBayes is distributed in the hope that it will be usef...
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/** * SPDX-FileCopyrightText: Inria <florent.leray@inria.fr> * SPDX-License-Identifier: AGPL-3.0-only */ #include "AbstractWriter.h" #include <utility> #include <iostream> static constexpr uint32_t MAX_PENDING_STIM_COUNT = 128; AbstractWriter::AbstractWriter(const std::string& writerName) : m_name(writerName) { ...
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///------------------------------------------------------------------------------------------------- /// /// \file ovasCConfigurationBrainProductsLiveAmp.cpp /// \brief Brain Products LiveAmp driver for OpenViBE /// \author Ratko Petrovic /// \copyright Copyright (C) 2017 Brain Products /// /// This library is free s...
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/* -*- mode: C++; indent-tabs-mode: nil; -*- * * This file is a part of LEMON, a generic C++ optimization library. * * Copyright (C) 2003-2013 * Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport * (Egervary Research Group on Combinatorial Optimization, EGRES). * * Permission to use, modify and distribut...
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//include OpenViBE #include "ovpCBoxAlgorithmQuadraticForm.h" //include C++ STL #include <iostream> #include <sstream> //atoi namespace OpenViBE { namespace Plugins { namespace SignalProcessing { bool CBoxAlgorithmQuadraticForm::initialize() { //the algorithms that decode and encode the signals m_decoder = &...
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///------------------------------------------------------------------------------------------------- /// /// \file CScenarioStateStack.cpp /// \copyright Copyright (C) 2022 Inria /// /// This program is free software: you can redistribute it and/or modify /// it under the terms of the GNU Affero General Public License...
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#include "IConnectionParallel.h" #if defined TARGET_OS_Windows #define WIN32_LEAN_AND_MEAN #include <windows.h> #include <commctrl.h> #elif defined TARGET_OS_Linux || defined TARGET_OS_MacOS #include <sys/ioctl.h> #include <string.h> #include <fcntl.h> #include <stdlib.h> #include <stdio.h> #include <sys/errno.h> #els...
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#include <algorithm> #include <hex/api/content_registry/data_processor.hpp> #include <hex/api/localization_manager.hpp> #include <hex/helpers/scaling.hpp> #include <hex/helpers/crypto.hpp> #include <hex/data_processor/node.hpp> #include <mbedtls/error.h> #include <nlohmann/json.hpp> namespace hex::plugin::builtin { ...
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/* # ============================================================================= # Copyright (c) 2016 - 2021 Blue Brain Project/EPFL # # See top-level LICENSE file for details. # ============================================================================= */ #include "coreneuron/coreneuron.hpp" #include "coreneuron...
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///---------------------------------------------- // Copyright 2011 Wellcome Trust Sanger Institute // Written by Jared Simpson (js18@sanger.ac.uk) // Released under the GPL //----------------------------------------------- // // HaplotypeBuilder - Construct candidate // haplotypes from a pair of k-mer seeds. // #inclu...
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#include "ovasCDriverMBTSmarting.h" #include "ovasCConfigurationMBTSmarting.h" #include <toolkit/ovtk_all.h> #include <string> #include <sstream> namespace OpenViBE { namespace AcquisitionServer { //___________________________________________________________________// // ...
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#include "line_search.h" #include "wpdas.h" /* weighted_pdas */ #include <vector> #define STEP_PARTITION 60; /****************************************************************************** ***************************** Constrained Solver ***************************** ************************************************...
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#if defined(TARGET_HAS_ThirdPartyLSL) #include "ovasCConfigurationLabStreamingLayer.h" #include <lsl_cpp.h> #include "ovasIHeader.h" #include <iostream> #include <sstream> namespace OpenViBE { namespace AcquisitionServer { CConfigurationLabStreamingLayer::CConfigurationLabStreamingLayer(IDriverContext& ctx, const ...
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//----------------------------------------------- // Copyright 2010 Wellcome Trust Sanger Institute // Written by Jared Simpson (js18@sanger.ac.uk) // Released under the GPL //----------------------------------------------- // // SGSearch - Algorithms and data structures // for searching a string graph // #include "SGS...
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#if defined(TARGET_HAS_ThirdPartyLSL) #include "ovasCConfigurationLabStreamingLayer.h" #include <lsl_cpp.h> #include "ovasIHeader.h" #include <iostream> #include <sstream> namespace OpenViBE { namespace AcquisitionServer { CConfigurationLabStreamingLayer::CConfigurationLabStreamingLayer(IDriverContext& ctx, const ...
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/* # ============================================================================= # Copyright (c) 2016 - 2022 Blue Brain Project/EPFL # # See top-level LICENSE file for details. # =============================================================================. */ #include "coreneuron/gpu/nrn_acc_manager.hpp" #include "c...
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#include "CBoxAlgorithmFeaturesSelection.hpp" #include <fstream> namespace OpenViBE { namespace Plugins { namespace FeaturesSelection { ///------------------------------------------------------------------------------------------------- bool CBoxAlgorithmFeaturesSelection::initialize() { // Stimulations m_sti...
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/* * Copyright 2021 Brian Raiter <breadbox@muppetlabs.com> * * Licensed under the Apache License, Version 2.0 (the "License"); * you may not use this file except in compliance with the License. * You may obtain a copy of the License at * * http://www.apache.org/licenses/LICENSE-2.0 * * Unless required by appli...
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//----------------------------------------------- // Copyright 2009 Wellcome Trust Sanger Institute // Written by Jared Simpson (js18@sanger.ac.uk) // Released under the GPL //----------------------------------------------- // // SACAInducedCopying algorithm // #include "SACAInducedCopying.h" #include "SuffixCompare.h"...
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//FastQTL: Fast and efficient QTL mapper for molecular phenotypes //Copyright (C) 2015 Olivier DELANEAU, Alfonso BUIL, Emmanouil DERMITZAKIS & Olivier DELANEAU // //This program is free software: you can redistribute it and/or modify //it under the terms of the GNU General Public License as published by //the Free Soft...
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///------------------------------------------------------------------------------------------------- /// /// \file CCommentEditorDialog.cpp /// \copyright Copyright (C) 2022 Inria /// /// This program is free software: you can redistribute it and/or modify /// it under the terms of the GNU Affero General Public Licens...
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///------------------------------------------------------------------------------------------------- /// /// \file CBoxAlgorithmTimeBasedEpoching.cpp /// \brief Classes implementation for the Box Time based epoching. /// \author Quentin Barthelemy (Mensia Technologies). /// \version 2.0. /// \copyright Copyright (C) 2...
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/** Optimizers for problems dealing with weighted 2 dimensional versions of TV norm regularization. One dimensional weighted solvers are used as building blocks within a proximal stacking framework. The proximal combiners are coded here. @author Álvaro Barbero Jiménez @author Suvrit Sra */ #inc...
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///------------------------------------------------------------------------------------------------- /// /// \file CBoxAlgorithmRiemannianPotatoField.cpp /// \brief Classes of the box riemannian potato field /// \author Axel Bouneau (Inria). /// \version 1.0. /// \date Thu Dec 05 10:00:00 2024. /// \Copyright (C) 2024...
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#include <content/yara_rule.hpp> #include <wolv/literals.hpp> #include <wolv/utils/guards.hpp> #include <wolv/utils/string.hpp> #include <wolv/io/file.hpp> // <yara/types.h>'s RE type has a zero-sized array, which is not allowed in ISO C++. #if !defined(_MSC_VER) #pragma GCC diagnostic push #pragma GCC diagno...
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//FastQTL: Fast and efficient QTL mapper for molecular phenotypes //Copyright (C) 2015 Olivier DELANEAU, Alfonso BUIL, Emmanouil DERMITZAKIS & Olivier DELANEAU // //This program is free software: you can redistribute it and/or modify //it under the terms of the GNU General Public License as published by //the Free Soft...
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#include "content/views/view_settings.hpp" #include <fonts/fonts.hpp> #include <hex/api/content_registry/user_interface.hpp> #include <hex/api/events/requests_gui.hpp> #include <hex/helpers/logger.hpp> #include <nlohmann/json.hpp> #include <popups/popup_question.hpp> #include <fonts/vscode_icons.hpp> namespace hex:...
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#if defined(TARGET_HAS_ThirdPartyEnobioAPI) #include "ovasCDriverEnobio3G.h" #include "ovasCConfigurationEnobio3G.h" #include <string.h> #include <toolkit/ovtk_all.h> namespace OpenViBE { namespace AcquisitionServer { CDriverEnobio3G::CDriverEnobio3G(IDriverContext& ctx) : IDriver(ctx), m_settings("AcquisitionSe...
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/******************************************************************************* "A Collection of Useful C++ Classes for Digital Signal Processing" By Vinnie Falco Official project location: https://github.com/vinniefalco/DSPFilters See Documentation.cpp for contact information, notes, and bibliography. ----------...
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#if defined(TARGET_HAS_ThirdPartyEnobioAPI) #include "ovasCDriverEnobio3G.h" #include "ovasCConfigurationEnobio3G.h" #include <string.h> #include <toolkit/ovtk_all.h> namespace OpenViBE { namespace AcquisitionServer { CDriverEnobio3G::CDriverEnobio3G(IDriverContext& ctx) : IDriver(ctx), m_settings("AcquisitionSe...
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#if defined(TARGET_HAS_ThirdPartyNeXus) #include "ovasCDriverMindMediaNeXus32B.h" #include "../ovasCConfigurationBuilder.h" #include <toolkit/ovtk_all.h> #include <system/ovCTime.h> #include <system/ovCMemory.h> #if defined TARGET_OS_Windows #include <cmath> #include <windows.h> namespace OpenViBE { namespace Acq...
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// // OpenViBE Tracker // // @author J.T. Lindgren // // @note This renderer is intended to be used when there is only // a stimulation track. More often, the Tracker users might want to // see the stimulations overlayed on the signal track. // #include <openvibe/ov_all.h> #include <toolkit/ovtk_all.h> #include <iost...
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#include <hex/data_processor/node.hpp> #include <hex/api/content_registry/data_processor.hpp> #include <hex/ui/imgui_imhex_extensions.h> #include <hex/helpers/utils.hpp> #include <hex/helpers/scaling.hpp> namespace hex::plugin::builtin { class NodeDisplayInteger : public dp::Node { public: NodeDisp...
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///------------------------------------------------------------------------------------------------- /// /// \file CBoxAlgorithmMatrix2dToVector.cpp /// \brief Implementation of the box Matrix2dToVector /// \author Arthur DESBOIS (INRIA). /// \version 0.0.1. /// \date June 28 15:13:00 2022. /// /// \copyright Copyright...
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/** * @file Api.cpp * @brief Implementation of the Api class for managing acquisitions and acquisition contexts. * This file contains the implementation of the Api class, which provides methods for * creating and managing acquisition contexts, changing drivers and writers, * and handling acquisitions. * * @author Flor...
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#include "content/providers/motorola_srec_provider.hpp" #include <hex/api/localization_manager.hpp> #include <hex/helpers/fmt.hpp> #include <hex/helpers/utils.hpp> #include <wolv/io/file.hpp> #include <wolv/io/fs.hpp> #include <wolv/utils/expected.hpp> #include <wolv/utils/string.hpp> namespace hex::plugin::builtin ...
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#if !defined(OS_WEB) #include <hex/helpers/http_requests.hpp> #include <curl/curl.h> namespace hex { namespace { std::string s_proxyUrl; bool s_proxyState; } std::string HttpRequest::StatusCode::toString() const { return std::visit(wolv::util::overloaded { [](Backen...
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#if defined TARGET_HAS_ThirdPartyITPP #include "ovpCSpectralAnalysis.h" #include <iostream> #include <itpp/itstat.h> #include <itpp/itsignal.h> namespace OpenViBE { namespace Plugins { namespace SignalProcessing { bool CSpectralAnalysis::initialize() { //reads the plugin settings const CString setting ...
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/** * SPDX-FileCopyrightText: Inria <thomas.prampart@inria.fr> * SPDX-License-Identifier: AGPL-3.0-only */ #include <regex> #include <QDebug> #include "tinyxml2.h" #include "updateHandler.h" using namespace tinyxml2; const std::string stringType = "(0x79a9edeb, 0x245d83fc)"; // OpenViBE::CIdentifier(0x79A9...
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/* -*- mode: C++; indent-tabs-mode: nil; -*- * * This file is a part of LEMON, a generic C++ optimization library. * * Copyright (C) 2003-2013 * Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport * (Egervary Research Group on Combinatorial Optimization, EGRES). * * Permission to use, modify and distribut...
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///----------------------------------------------- // Copyright 2010 Wellcome Trust Sanger Institute // Written by Jared Simpson (js18@sanger.ac.uk) // Released under the GPL //----------------------------------------------- // // StringGraphGenerator - Iteratively construct // a local String Graph using the FM-index ...
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/******************************************************************************* "A Collection of Useful C++ Classes for Digital Signal Processing" By Vinnie Falco Official project location: https://github.com/vinniefalco/DSPFilters See Documentation.cpp for contact information, notes, and bibliography. ----------...
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///------------------------------------------------------------------------------------------------- /// \copyright Copyright (C) 2012, Mensia Technologies SA. All rights reserved. /// Rights transferred to Inria, contract signed 21.11.2014 ///----------------------------------------------------------------------------...
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/******************************************************************************* "A Collection of Useful C++ Classes for Digital Signal Processing" By Vinnie Falco Official project location: https://github.com/vinniefalco/DSPFilters See Documentation.cpp for contact information, notes, and bibliography. ----------...
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#include "CNetAcqControlAPI.h" #include <Acquisition.h> #include <Api.h> #include <openvibe/acquisition-messaging/ovCtrlCmdMsg.h> #include <iostream> std::unique_ptr<CNetAcqControlAPI> CNetAcqControlAPI::s_instance = nullptr; bool readControlMsg(void* data, size_t dataSize, uint64_t remoteId) { try { ...
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#include <hex/test/tests.hpp> #include <wolv/io/file.hpp> #include <hex/providers/file_backed_provider_data.hpp> #include <hex/test/test_provider.hpp> #include <hex/api/localization_manager.hpp> #include <charconv> #include <chrono> #include <thread> using namespace std::literals::string_literals; using namespace he...
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///------------------------------------------------------------------------------------------------- /// /// \file CBoxAlgorithmKeypressEmulator.cpp /// \author Jussi T. Lindgren (Inria) /// \version 0.1. /// \copyright Copyright (C) 2022 Inria /// /// This program is free software: you can redistribute it and/or modi...
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/* # File : condat_fast_tv.cpp # # Version : proxTV 1.0, Dec. 18, 2012 # # Author : Laurent Condat, PhD, CNRS research fellow in France. # Minor modifications by Alvaro Barbero. # # Description : This file contains an implementation in the C language # of algorit...
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// SPDX-License-Identifier: AGPL-3.0-only // SPDX-FileCopyrightText: Inria #include <TcpTaggingService.h> #include <TcpTaggingProtocol.h> #include <CNetwork.h> #include <CServer.h> #include <NAL.h> #include <gtest/gtest.h> #include <chrono> #include <cstring> #include <iostream> #include <string> #include <thread> ...
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/** * This is a simple forwarder that launches the main ImHex executable with the * same command line as the current process. The reason for this is that even * though ImHex is a GUI application in general, it also has a command line * interface that can be used to perform various tasks. The issue with this is * t...
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///------------------------------------------------------------------------------------------------- /// /// \file CBoxAlgorithmVotingClassifier.cpp /// \brief Classes implementation for the Box Voting Classifier. /// \author Yann Renard (Inria). /// \version 1.0. /// \copyright Copyright (C) 2022 Inria /// /// This p...
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#include <crash_handlers.hpp> #include <hex/api/imhex_api/system.hpp> #include <hex/api/task_manager.hpp> #include <hex/helpers/logger.hpp> #include <hex/helpers/default_paths.hpp> #include <wolv/utils/string.hpp> #include <window.hpp> #include <init/tasks.hpp> #include <hex/trace/stacktrace.hpp> #include <nlohman...
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// SPDX-FileCopyrightText: Inria <tristan.cabel@inria.fr> // SPDX-License-Identifier: AGPL-3.0-only #include "CROCCurveView.hpp" #include <QXYSeries> #include <QQmlContext> #include <QQmlEngine> #include <QQmlComponent> #include <QQuickItem> #include <QQuickWindow> #include <QValueAxis> Q_DECLARE_METATYPE(QAbstractA...
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///------------------------------------------------------------------------------------------------- /// /// \file CBoxAlgorithmSignalDecimation.cpp /// \brief Classes implementation for the Box Signal Decimation. /// \author Yann Renard (Inria). /// \version 1.0. /// \copyright Copyright (C) 2022 Inria /// /// This p...
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#include <hex/helpers/utils.hpp> #include <hex/api/localization_manager.hpp> #include <imgui.h> #include <imgui_internal.h> #include <fonts/fonts.hpp> #include <fonts/vscode_icons.hpp> #include <hex/helpers/logger.hpp> #include <hex/ui/imgui_imhex_extensions.h> namespace hex::plugin::builtin { static void draw...
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///------------------------------------------------------------------------------------------------- /// /// \file CBoxAlgorithmStreamedMatrixSwitch.cpp /// \author Laurent Bonnet (Inria) /// \version 1.1. /// \date 12/05/2011. /// \copyright Copyright (C) 2022 Inria /// /// This program is free software: you can redi...
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#include <hex/test/tests.hpp> #include <hex/helpers/unicode.hpp> #include <content/helpers/decoded_string.hpp> #include <span> #include <vector> using namespace hex::plugin::builtin; namespace { std::vector<u8> bytesOf(std::string_view text) { return { text.begin(), text.end() }; } // One UTF-...
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#include "ovasCHeader.h" #include <map> #include <string> namespace OpenViBE { namespace AcquisitionServer { namespace { class CHeaderImpl final : public IHeader { public: CHeaderImpl() : m_experimentID("Identifier", "Identifier", 0, 0, 10000000), m_subjectAge("Age", "Age", 18, 0, 115), m_...
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/* -*- mode: C++; indent-tabs-mode: nil; -*- * * This file is a part of LEMON, a generic C++ optimization library. * * Copyright (C) 2003-2013 * Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport * (Egervary Research Group on Combinatorial Optimization, EGRES). * * Permission to use, modify and distribut...
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///------------------------------------------------------------------------------------------------- /// /// \file CBoxAlgorithmEpochAverage.cpp /// \brief Classes implementation for the Box Epoch average. /// \author Yann Renard (Inria). /// \version 1.0. /// \copyright Copyright (C) 2022 Inria /// /// This program i...
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///------------------------------------------------------------------------------------------------- /// /// \file CBoxAlgorithmStatisticGenerator.cpp /// \author Serriere Guillaume (Inria) /// \version 1.0. /// \date 30/04/2015. /// \copyright Copyright (C) 2022 Inria /// /// This program is free software: you can re...
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#include "AlignmentFragment.h" #include "AlignedContig.h" #include "SvabaDebug.h" #define MIN_INDEL_MATCH_BRACKET 0 #define MAX_INDELS 10000 #define MAX_INDEL_PER_CONTIG 6 // write the alignment record to a BAM file // void AlignmentFragment::writeToBAM(SeqLib::BamWriter& bw) const { // bw.WriteRecord(*m_align); ...
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#include "splitcounter.h" #include <getopt.h> #include <iostream> #include <sstream> #include <cassert> #include "gzstream.h" #include "SnowmanUtils.h" #include "SeqLib/BamReader.h" #include "SeqLib/ReadFilter.h" #define MIN_CLIP_FACTOR 2 #define MIN_MATCH_FACTOR 4 #define MIN_MAPQ 10 #define READ_LEN 151 SeqLib::...
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#include "CBoxQmlRenderer.hpp" #include "SnapshotPort.h" #include <cmath> #include <iostream> #include <QCoreApplication> #include <QQuickItem> #include <QQuickRenderTarget> #include <QVariantMap> #include <rhi/qrhi.h> namespace OpenViBE { namespace PluginInspector { namespace { /// Margin kept around the box. Als...
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#include "SvabaThreadUnit.h" #include "SvabaOutputWriter.h" #if defined(__GLIBC__) #include <malloc.h> #endif // Build a new BamHeader that prepends an @HD line (with the given sort order) // to the @SQ block of `src`. Avoids SeqLib::BamHeader::AsString(), which // blindly dereferences h->text; in modern htslib tha...
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///------------------------------------------------------------------------------------------------- /// /// \file CBoxAlgorithmMatrixValidityChecker.cpp /// \brief Classes implementation for the Box Matrix validity checker. /// \author Yann Renard (Inria). /// \version 1.0. /// \copyright Copyright (C) 2022 Inria ///...
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#include "ovasCHeaderBrainProductsVAmp.h" #include "ovasCConfigurationBrainProductsVAmp.h" #if defined TARGET_HAS_ThirdPartyUSBFirstAmpAPI #include <windows.h> #include <FirstAmp.h> #include <map> #include <string> #define _NoValueI_ 0xffffffff namespace OpenViBE { namespace AcquisitionServer { static size_t eegC...
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///------------------------------------------------------------------------------------------------- /// /// \file Median.cpp /// \brief All Median functions implementation for array or matrix. /// \author Thibaut Monseigne (Inria). /// \version 1.0. /// \date 29/07/2020. /// \copyright Copyright (C) 2022 Inria /// //...
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#if defined TARGET_HAS_ThirdPartyThinkGearAPI #include "ovasCConfigurationNeuroskyMindset.h" #include <system/ovCTime.h> #include <sstream> #include <thinkgear.h> namespace OpenViBE { namespace AcquisitionServer { //------------------------------------------------------------------------------------------ // NOTE :...
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#include "window.hpp" #if defined(OS_LINUX) #include <hex/api/imhex_api/system.hpp> #include <hex/api/content_registry/settings.hpp> #include <hex/api/events/events_gui.hpp> #include <hex/api/events/events_interaction.hpp> #include <hex/api/events/requests_gui.hpp> #include <hex/api/task_manag...
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#include "ovpCExperimentInfoDecoder.h" namespace OpenViBE { namespace Plugins { namespace StreamCodecs { CExperimentInfoDecoder::CExperimentInfoDecoder() {} // ________________________________________________________________________________________________________________ // bool CExperimentInfoDecoder::initialize(...
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/* * Receives data from one or two OpenViBE TCPWriter boxes, a signal writer and a stimulus writer. * * The code reads the two corresponding sockets asynchronously. With signal, the header contents * are printed first. If a stimulus is received, the code will print out the stimulus * and how many bytes of signal h...
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// // OpenViBE Tracker // // @author J.T. Lindgren // // @todo add horizontal scaling support // @todo add event handlers // @todo add ruler, stimulations, channel names, a million of other things #include <openvibe/ov_all.h> #include <toolkit/ovtk_all.h> #include <iostream> #include <mensia/advanced-visualization.h...
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#include "ovasCPluginTCPTagging.h" #include "ovasParameterHelper.h" #include <system/ovCTime.h> // #define TCPTAGGING_DEBUG #if defined(TCPTAGGING_DEBUG) #include <iomanip> #endif namespace OpenViBE { namespace AcquisitionServer { namespace Plugins { CPluginTCPTagging::CPluginTCPTagging(const Kernel::IKernelContext...
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///------------------------------------------------------------------------------------------------- /// /// \file CBoxAlgorithmSignalMerger.cpp /// \brief Classes implementation for the Box Signal Merger. /// \author Yann Renard (Inria). /// \version 1.0. /// \copyright Copyright (C) 2022 Inria /// /// This program i...
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///------------------------------------------------------------------------------------------------- /// /// \file CompareCSV.cpp /// \author Thibaut Monseigne / Inria. /// \version 2.0. /// \date 19/04/2022. /// \copyright Copyright (C) 2022 Inria /// /// This program is free software: you can redistribute it and/or ...
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///------------------------------------------------------------------------------------------------- /// /// \file CBoxProxy.cpp /// \copyright Copyright (C) 2022 Inria /// /// This program is free software: you can redistribute it and/or modify /// it under the terms of the GNU Affero General Public License as publis...
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///------------------------------------------------------------------------------------------------- /// /// \file uoTimeTest.cpp /// \copyright Copyright (C) 2022 Inria /// /// This program is free software: you can redistribute it and/or modify /// it under the terms of the GNU Affero General Public License as publi...