sha256 stringlengths 64 64 | language stringclasses 28
values | size int32 1 491k | lines int32 1 23.2k | content stringlengths 1 200k |
|---|---|---|---|---|
00bee3af66c492a152dc68db935b8786f965ca381efb2b79d65af556f0d8355a | C/C++ | 3,294 | 88 | #pragma once
#include "ov_defines.h"
#include "CIdentifier.hpp"
namespace OpenViBE {
class IObjectVisitor;
namespace Kernel {
class CKernelObjectFactory;
} // namespace Kernel
#define _IsDerivedFromClass_(_SuperClassName_,_ClassIdentifier_) \
bool isDerivedFromClass( const OpenViBE::CIdentifier& classId) cons... |
94e3cfa3c4d4bfc6c3fe8708c2ebac39b1b2fd4f98ea87cc204abcb4bb5cb31b | C/C++ | 3,295 | 54 | #pragma once
#include "../ovtk_base.h"
namespace OpenViBE {
namespace Toolkit {
namespace Matrix {
// Can be used : CMatrix class behaviour is a little different but this function is never used (except in test). Avoid to used it, intended to be removed.
OVTK_API bool toString(const CMatrix& matrix, CString& str, con... |
b1730b4048b1ea629aeb1719f5d65fca2b85d66de89bf1392f5d61103cfb008f | C/C++ | 3,296 | 78 | #pragma once
#include "../ovkTKernelObject.h"
#include <vector>
#include <map>
#include <mutex>
#include <condition_variable>
#include <thread>
namespace OpenViBE {
namespace Kernel {
class CLogManager final : public TKernelObject<ILogManager>
{
public:
explicit CLogManager(const IKernelContext& ctx) : TKerne... |
081195949edee5ef6e862990296d04bb3e44dadc9ce470afa121c3db7e26f10a | C/C++ | 3,301 | 107 | //-----------------------------------------------
// Copyright 2010 Wellcome Trust Sanger Institute
// Written by Jared Simpson (js18@sanger.ac.uk)
// Released under the GPL
//-----------------------------------------------
//
// BWTCodec - Encoder/decoder for a BWT
// string over the alphabet $ACGT using
// 3 bits per... |
a2871ecdc8e3f3c77e2dd95e7e3502b03c0bf524ed1e86048b220c0080c95b82 | C/C++ | 3,302 | 96 | /**
* SPDX-FileCopyrightText: Inria <florent.leray@inria.fr>
* SPDX-License-Identifier: AGPL-3.0-only
*/
/**
* @file CircularBuffer.h
* @brief Header file for the CircularBuffer class.
*
* This file declares the `CircularBuffer` class, which provides a thread-safe
* circular buffer implementation for managing ... |
f2f61714317d14e845004c95dadcbbfccdc8a9fa0f58c369f4a73e5a8e92e1b4 | C/C++ | 3,303 | 91 | #pragma once
#include "../ovp_defines.h"
#include <toolkit/ovtk_all.h>
namespace OpenViBE {
namespace Plugins {
namespace Examples {
class CHelloWorldWithInput final : public Toolkit::TBoxAlgorithm<IBoxAlgorithm>
{
public:
void release() override { delete this; }
bool processInput(const size_t index) override... |
c604e1ca3125138efe9f0e812ce9447af0ed86da222fa5c929221f0e09e8916c | C/C++ | 3,306 | 93 | #pragma once
#include "../ovkTKernelObject.h"
#include "ovkCScenario.h"
#include <map>
#include <array>
namespace OpenViBE {
namespace Kernel {
typedef struct _InterfacorRequest
{
size_t index = size_t(-1);
CIdentifier identifier = CIdentifier::undefined();
CIdentifier typeID = CIdentifier... |
fc7028dfc33e1c5e69f204892ef1927dc8fc846304023dfcc1d2762772265df1 | C/C++ | 3,317 | 112 |
/********************
PhyloBayes MPI. Copyright 2010-2013 Nicolas Lartillot, Nicolas Rodrigue, Daniel Stubbs, Jacques Richer.
PhyloBayes is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
as published by the Free Software Foundation, either version 3 of the L... |
8e1e1aee9b4fc7e5de06cb492bd97f0f8773dd36b8895f9d67b93e1dcc9a5936 | C/C++ | 3,323 | 116 |
/********************
PhyloBayes MPI. Copyright 2010-2013 Nicolas Lartillot, Nicolas Rodrigue, Daniel Stubbs, Jacques Richer.
PhyloBayes is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
as published by the Free Software Foundation, either version 3 of the L... |
6497d1fd43649b6a2e8a747b7521fccf383516d0a2b71f3bc7b4045c351d2363 | C/C++ | 3,333 | 91 | #pragma once
#include "../ovkTKernelObject.h"
#include <vector>
namespace OpenViBE {
namespace Metabox {
/**
* \brief The CMetaboxObjectDesc virtual BoxAlgorithmDesc for metaboxes
*
* This class provides a virtual algorithm descriptor for metaboxes. Each metabox-scenario
* will result in one of these descriptor... |
719c14c6addedead786403935c61ca53542a20bc05c7e14584a46de246e47813 | C/C++ | 3,340 | 82 | /*******************************************************************************
Copyright 2006-2012 Lukas Käll <lukas.kall@scilifelab.se>
Licensed under the Apache License, Version 2.0 (the "License");
you may not use this file except in compliance with the License.
You may obtain a copy of the License at
http:... |
8eab8341786f764d27c5523952099b9b57837d566d41ccb05007a0e7397ce2d8 | C/C++ | 3,348 | 108 | // @copyright notice: Possibly due to dependencies, this box used to be GPL before upgrade to AGPL3
#pragma once
#if defined TARGET_HAS_ThirdPartyITPP
#include "../ovp_defines.h"
#include <toolkit/ovtk_all.h>
#include <vector>
#include <map>
#include <string>
namespace OpenViBE {
namespace Plugins {
namespace Sig... |
0215dd63af7ed0ba94471ed06c05792a3a8e402299b6103eaf1842da972fe4e2 | C/C++ | 3,353 | 108 | #pragma once
#if defined TARGET_HAS_ThirdPartyNeXus
#include "ovasIDriver.h"
#include "../ovasCHeader.h"
#include "ovas_base.h"
#include "../ovasCSettingsHelper.h"
#include "../ovasCSettingsHelperOperators.h"
#include "ovasCConfigurationTMSIRefa32B.h"
// This dll comes from the sdk-nexus.zip dependency archive
#de... |
1d1cbd411d1035925e01dcdc4a44953842e5dbdc9c275638644145aca9edcd2c | C/C++ | 3,373 | 87 | #pragma once
#include "../../ovp_defines.h"
#include <openvibe/ov_all.h>
#include <toolkit/ovtk_all.h>
#include <fstream>
#include <map>
namespace OpenViBE {
namespace Plugins {
namespace FileIO {
class CBoxAlgorithmBrainampFileWriter final : public Toolkit::TBoxAlgorithm<IBoxAlgorithm>
{
public:
void release() ... |
23810faedc4e6c4408bf7d5520f75531ac91c852a77bcf8c369c59f8120eaf61 | C/C++ | 3,380 | 84 | // @copyright notice: Possibly due to dependencies, this box used to be GPL before upgrade to AGPL3
#pragma once
#include "../ovp_defines.h"
#if defined TARGET_HAS_ThirdPartyITPP
#include "../ovp_defines.h"
#include <openvibe/ov_all.h>
#include <toolkit/ovtk_all.h>
namespace OpenViBE {
namespace Plugins {
namespace... |
bae7f54c9ff3a1d80fb5327aa36f9dab66065c1905e30068a0cbfd95e8980382 | C/C++ | 3,380 | 120 | /*
* NeuroServo driver for OpenViBE
*
* \author (NeuroServo)
* \date Wed Nov 23 00:24:00 2016
*
*/
#pragma once
#if defined TARGET_OS_Windows
#if defined TARGET_HAS_ThirdPartyNeuroServo
#include "ovasIDriver.h"
#include "../ovasCHeader.h"
#include <openvibe/ov_all.h>
#include "../ovasCSettingsHelper.h"
#include "..... |
9fabf3405a42af909982815fabd8eaa6d23da0887ce0b4bb644ab1e80d44866f | C/C++ | 3,397 | 86 | #pragma once
#include "defines.hpp"
#include <openvibe/ov_all.h>
#include <toolkit/ovtk_all.h>
namespace OpenViBE {
namespace Plugins {
namespace SignalProcessing {
class CBoxAlgorithmQuadraticForm final : virtual public Toolkit::TBoxAlgorithm<IBoxAlgorithm>
{
public:
void release() override { delete this; }
... |
4878e2a5ab328702fbdf17331ff67f02f401ad71d028d7f1d0f5b905d1d407f5 | C/C++ | 3,412 | 93 | #pragma once
#include "../../ovp_defines.h"
#include <openvibe/ov_all.h>
#include <toolkit/ovtk_all.h>
#include <cstdio>
#include <iostream>
#include <fstream>
namespace OpenViBE {
namespace Plugins {
namespace FileIO {
class CBoxAlgorithmCSVFileWriter final : public Toolkit::TBoxAlgorithm<IBoxAlgorithm>
{
public:
... |
d79b04c5c1061ee3c07b11d85227c3643467b299a881bb83f5b14b77f43f910b | C/C++ | 3,414 | 101 | /*******************************************************************************
* SVMlin
* Copyright (c) 2006 Vikas Sindhwani at the University of Chicago.
* Adapted to Percolator by Lukas Käll at the University of Washington
* Sped up by John Halloran at the University of California, Davis, as detailed in:
*****... |
7c7d409cfdd818c0910db6477c6bcf80dd9f37df7bf6386580884f11ec6b12cd | C/C++ | 3,417 | 99 | #pragma once
#include "defines.hpp"
#include <openvibe/ov_all.h>
#include <toolkit/ovtk_all.h>
namespace OpenViBE {
namespace Plugins {
namespace SignalProcessing {
/**
* \class CBoxAlgorithmHilbert
* \author Alison Cellard (Inria)
* \date Thu Jun 6 13:47:53 2013
* \brief The class CBoxAlgorithmHilbert describe... |
2482248ff933e2afc97b1318298a7a34d337adf1fd391698d933e54e968ff669 | C/C++ | 3,437 | 118 | /*******************************************************************************
Copyright 2006-2012 Lukas Käll <lukas.kall@scilifelab.se>
Licensed under the Apache License, Version 2.0 (the "License");
you may not use this file except in compliance with the License.
You may obtain a copy of the License at
http://www... |
aea50e3ecc43fb58fc5a33b06d9704dd2aea63fc806962d9eae707ee17c538f2 | C/C++ | 3,451 | 81 | //
// OpenViBE Tracker
//
#pragma once
#include <openvibe/ov_all.h>
#include <toolkit/ovtk_all.h>
#include "StreamRendererMatrix.h"
#include "StreamRendererSignal.h"
#include "StreamRendererStimulation.h"
#include "StreamRendererSpectrum.h"
#include "StreamRendererExperimentInfo.h"
#include "StreamRendererLabel.h"
#... |
156adf179e844cf8f3626bd6db5414beba07fc03c3cd0b3967baf1daf793b05c | C/C++ | 3,464 | 112 | #pragma once
#include "../ovp_defines.h"
#include "../ovp_gdf_helpers.h"
#include <openvibe/ov_all.h>
#include <toolkit/ovtk_all.h>
#include <fstream>
#include <vector>
namespace OpenViBE {
namespace Plugins {
namespace FileIO {
/**
* The plugin's main class
*
*/
class CGDFFileWriter final : public Toolkit::TBoxAl... |
36c64081d7b9a4315f6866cea2c18177ca5e1998e9766ed3bf30b8c607ac80c6 | C/C++ | 3,467 | 85 | /*
# File : condat_fast_tv.c
#
# Version : proxTV 1.0, Dec. 18, 2012
#
# Author : Laurent Condat, PhD, CNRS research fellow in France.
# Minor modifications by Alvaro Barbero.
#
# Description : This file contains an implementation in the C language
# of algorith... |
e5b7aea306007a330234361a65d246d80e045a73371d9721a69e736140849cae | C/C++ | 3,467 | 125 | #ifndef _LIBSVM_H
#define _LIBSVM_H
#define _DENSE_REP
#include <vector>
#include "PseudoRandom.h"
#ifdef __cplusplus
extern "C" {
#endif
#ifdef _DENSE_REP
struct svm_node {
int dim;
double* values;
};
struct svm_problem {
std::size_t l;
double* y;
struct svm_node* x;
};
#else
struct svm_node {... |
4810701d534122b4ffa6f062b073ab0e50035818dfdfec35404a0f93c94d2e5e | C/C++ | 3,476 | 85 | /*
* Copyright (C) 2010, Stefan Klanke
* F.C. Donders Centre for Cognitive Neuroimaging, Radboud University Nijmegen,
* Kapittelweg 29, 6525 EN Nijmegen, The Netherlands
*/
#ifndef __socketserver_h
#define __socketserver_h
#include "buffer.h"
#include <pthread.h>
#define MERGE_THRESHOLD 4096 /* TODO: opti... |
d7165a5204d1be31461ba5466ee287f0bf96f125ccace97fb20069b89294f995 | C/C++ | 3,477 | 101 | #pragma once
#include <openvibe/ov_all.h>
#include <toolkit/ovtk_all.h>
#define SET_BIT(bit) (1 << bit)
namespace OpenViBE {
namespace Plugins {
namespace SignalProcessing {
class CInputChannel
{
typedef enum
{
NOT_STARTED = 0,
SIGNAL_HEADER_DETECTED = SET_BIT(0),
STIMULATION_SYNCH... |
d8ff4e6edba78b2dcba02a30b9d7fbd5b6e218278a82b057523f0a45fa4ad251 | C/C++ | 3,480 | 105 |
/********************
PhyloBayes MPI. Copyright 2010-2013 Nicolas Lartillot, Nicolas Rodrigue, Daniel Stubbs, Jacques Richer.
PhyloBayes is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
as published by the Free Software Foundation, either version 3 of the L... |
7edcd783bcd8722ae52e13d01824aea7783d06b48c2ae9ee7e3415db12c26593 | C/C++ | 3,494 | 89 | /*
Copyright (c) 2016, Blue Brain Project
All rights reserved.
Redistribution and use in source and binary forms, with or without modification,
are permitted provided that the following conditions are met:
1. Redistributions of source code must retain the above copyright notice,
this list of conditions and the foll... |
e8e73b93e4aae36bc588383875ec02507b2ee6326ad9341cc4d4b7c01be5e2f7 | C/C++ | 3,497 | 104 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a copy of the MPL was not distributed
// with this file, You can ob... |
b4c31f7b932680f42dadd3e1651e2dd36017dea2049cf76b9e0e2eb0080ce341 | C/C++ | 3,500 | 74 | #pragma once
#include "../ovkTKernelObject.h"
#include <map>
#include <string>
#include <mutex>
namespace OpenViBE {
namespace Kernel {
class IConfigurationKeywordExpandCallback;
typedef struct
{
CString name;
CString value;
} config_token_t;
class CConfigurationManager final : public TKernelObject<IConfig... |
903d0807279c4607c1831e60d0e6672e7be25bde30d7e097ebcbc7c3aefcc991 | C/C++ | 3,501 | 152 | #ifndef CODONSTATESPACE_H
#define CODONSTATESPACE_H
#include "StateSpace.h"
#include <map>
class CodonStateSpace : public StateSpace {
public:
static const int Npos = 3;
// by default, codons always exclude stops
// if a method takes or returns a codon stops INCLUDED, then this is made explicit in the method's... |
8756f6cd1e551486b51418d632ff4a6c9d4b855d28a88df976630d2f1830c96d | C/C++ | 3,503 | 115 | #ifndef ANALYTICS_H
#define ANALYTICS_H
#include <boost/asio.hpp>
#include <boost/functional/hash.hpp>
#include <sstream>
#include <iostream>
#include <string>
#include <iomanip>
#include "Version.h"
using boost::asio::ip::tcp;
// Define your PostHog API key here
static const std::string POSTHOG_API_KEY = "phc_VdyCa... |
6b32fdbf7d94501954157e68ca08701ceb5be952f14308dee5343b1cefdbeb4b | C/C++ | 3,505 | 90 |
/********************
PhyloBayes MPI. Copyright 2010-2013 Nicolas Lartillot, Nicolas Rodrigue, Daniel Stubbs, Jacques Richer.
PhyloBayes is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
as published by the Free Software Foundation, either version 3 of the L... |
cdbb7981cb00c55a28cc6273ae776c40bcc990e2e069151434ceffab20921b0d | C/C++ | 3,537 | 110 | /*******************************************************************************
Copyright 2006-2012 Lukas Käll <lukas.kall@scilifelab.se>
Licensed under the Apache License, Version 2.0 (the "License");
you may not use this file except in compliance with the License.
You may obtain a copy of the License at
http:... |
e51461e6e7984a205d9a3161d7157c1c01b2691ffa3d77bc5f141daaa3fca299 | C/C++ | 3,539 | 155 | /***************************************************
*** adapted from crux/src/c/PeptideConstraint.h ***
***************************************************/
/**
* \file peptide_constraint.h
* $Revision: 1.5 $
* \brief Object for holding the peptide constraint information.
*/
#ifndef PEPTIDE_CONSTRAINT_H
#def... |
720ef098cf137f3819de23be51876b45a6f683d646a50915075081f82afc215b | C/C++ | 3,550 | 81 | #pragma once
#include "IReader.h"
namespace EBML {
// ________________________________________________________________________________________________________________
//
template <class TOwnerClass>
class TReaderCallbackProxy1 final : public IReaderCallback
{
public:
TReaderCallbackProxy1(TOwnerClass& ownerObje... |
c5ba4e963e08d1a277e917df78d24d419378068b964df6c926fbd35bfb84dbf6 | C/C++ | 3,555 | 93 | #pragma once
#include "../ovIKernelObject.h"
#include "../../metaboxes/ovIMetaboxObjectDesc.h"
namespace OpenViBE {
namespace Kernel {
/**
* \class IMetaboxManager
* \brief Metabox manager
* \author Thierry Gaugry (INRIA/Mensia)
* \date 2017-04-12
* \ingroup Group_Metabox
* \ingroup Group_Kernel
*
* The metab... |
1f1eaad26304970843d03f6f8b0139b46bd8c1ed20edf00eba12ba639a5cb86c | C/C++ | 3,567 | 115 | //-----------------------------------------------
// Copyright 2010 Wellcome Trust Sanger Institute
// Written by Jared Simpson (js18@sanger.ac.uk)
// Released under the GPL
//-----------------------------------------------
//
// ASQG - Definitions and functions
// for handling ASGQ files
//
#ifndef ASQG_H
#define ASQG... |
49b988b87ae0ecd165e451b0296a3580d9a5d3895e0e20d15dfeaa969bdc08f3 | C/C++ | 3,568 | 117 | /**
* \file defines.h
* \author Yann Renard (INRIA/IRISA)
* \date 2006-08-07
* \brief Contains basic type definitions and EBML standard identifiers
*/
#pragma once
#include <ov_common_defines.h>
#include <cstdlib> // For Unix Compatibility
#include <cstdint>
//__________________________________________________... |
6e07c0ab095f4108e50e9e7f6d0c33cd8218ef82259a0aa518a2c134294617d5 | C/C++ | 3,568 | 141 |
/********************
PhyloBayes MPI. Copyright 2010-2013 Nicolas Lartillot, Nicolas Rodrigue, Daniel Stubbs, Jacques Richer.
PhyloBayes is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
as published by the Free Software Foundation, either version 3 of the L... |
9378a8b6f9f1674a8dc69bfbd8cb9b374d5ebad10f1a75de95e210f3e7a5ff1a | C/C++ | 3,573 | 116 | #include "MonotoneRegressor.h"
#include <algorithm>
#include <cassert>
#include <numeric>
#include <stdexcept>
class PAVARegressor final : public MonotoneRegressor {
public:
using MonotoneRegressor::MonotoneRegressor;
std::vector<double> fit_xy(const std::vector<double>& x,
const std:... |
7f5cd8b4af7404bbcb1dd372b33d4c9bb311fb70a119ff7e8e8528d1f3d4cceb | C/C++ | 3,584 | 115 | //-----------------------------------------------
// Copyright 2010 Wellcome Trust Sanger Institute
// Written by Jared Simpson (js18@sanger.ac.uk)
// Released under the GPL
//-----------------------------------------------
//
// ASQG - Definitions and functions
// for handling ASGQ files
//
#ifndef SVABA_ASQG_H
#defin... |
fba063f5dca755410e5bd118be54ae0450fd37daee0022cd3d872056d68b2054 | C/C++ | 3,585 | 129 | /* -*- mode: C++; indent-tabs-mode: nil; -*-
*
* This file is a part of LEMON, a generic C++ optimization library.
*
* Copyright (C) 2003-2013
* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
* (Egervary Research Group on Combinatorial Optimization, EGRES).
*
* Permission to use, modify and distribut... |
5530c31d965973cceb407aa05721ac8618d17b8078032dba182442379f94cd8a | C/C++ | 3,587 | 58 | #pragma once
#include "../ovkTKernelObject.h"
#include <map>
namespace OpenViBE {
namespace Kernel {
class CScenario;
class CScenarioManager final : public TKernelObject<IScenarioManager>
{
public:
explicit CScenarioManager(const IKernelContext& ctx);
~CScenarioManager() override;
void cloneScenarioImp... |
3a56c6cf3d0eb6675b5c6c5c243f6345694f24a3aca5f1fea432ba5d696ed142 | C/C++ | 3,595 | 101 | /**
* SPDX-FileCopyrightText: Inria <thomas.prampart@inria.fr>
* SPDX-License-Identifier: AGPL-3.0-only
*/
#pragma once
#include "parameterObject.h"
#include <openvibe/parameters/parameterStringVector.h>
namespace OpenViBE {
namespace Parameters {
/**
* @brief Qt/QML wrapper for a string-vector parameter.
*
* ... |
d3b0682fc37a532a27e96cc5f0f8cf4c1910188538b615ed53fb5b15beea2380 | C/C++ | 3,602 | 94 | /**
* SPDX-FileCopyrightText: Inria <thomas.prampart@inria.fr>
* SPDX-License-Identifier: AGPL-3.0-only
*/
#pragma once
#include <QtCore>
#include <QtQml>
#include <QJSValue>
#include "ImpedanceItem.h"
namespace OpenViBE {
namespace AcquisitionServer {
class AcquisitionController : public QObject
{
Q_OBJECT... |
2bc34fcb41ab0529c5beca170cab7b852da47db1edf7833ef14951990c8d85cf | C/C++ | 3,613 | 128 | ///-------------------------------------------------------------------------------------------------
///
/// \file ovas_defines_brainmaster_discovery.h
/// \copyright Copyright (C) 2012, Yann Renard. All rights reserved.
///
/// This library is free software; you can redistribute it and/or
/// modify it under the ter... |
ee96356ca133b24172cde281b29b62710e00a1b3dcb55670386738c1a1939e75 | C/C++ | 3,625 | 76 | #pragma once
#include "../ovkTKernelObject.h"
#include <map>
namespace OpenViBE {
namespace Kernel {
class CAlgorithmProxy final : public TKernelObject<IAlgorithmProxy>
{
public:
CAlgorithmProxy(const IKernelContext& ctx, Plugins::IAlgorithm& rAlgorithm, const Plugins::IAlgorithmDesc& algorithmDesc);
~CAlgo... |
774e11738cb28f701faf261a93163b85ccb6f38453f2667d54cb7a1c86f5250e | C/C++ | 3,626 | 78 | #pragma once
#include "../../ovp_defines.h"
#include "ovpCEBMLBaseDecoder.h"
#include <stack>
namespace OpenViBE {
namespace Plugins {
namespace StreamCodecs {
class CAcquisitionDecoder final : public CEBMLBaseDecoder
{
public:
CAcquisitionDecoder();
void release() override { delete this; }
bool initializ... |
428cbb801b69355d33b7e907d7079653df0399ec904e41f5ccfb9b47718a5086 | C/C++ | 3,640 | 119 |
/********************
PhyloBayes MPI. Copyright 2010-2013 Nicolas Lartillot, Nicolas Rodrigue, Daniel Stubbs, Jacques Richer.
PhyloBayes is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
as published by the Free Software Foundation, either version 3 of the L... |
93050426e704ac6e68915c7978ab9cc58c51459f1e2dab7f6d7cd96358700fb6 | C/C++ | 3,667 | 129 | //-----------------------------------------------
// Copyright 2009 Wellcome Trust Sanger Institute
// Written by Jared Simpson (js18@sanger.ac.uk)
// Released under the GPL license
//-----------------------------------------------
//
// SuffixCompare - Suffix Comparator classes
// Used for histogram/bucket sort, mkqs ... |
0986ee85ddb72ee58211b730c244b7c2038ab35c8fdafd1ecdff0c69c7f04117 | C/C++ | 3,673 | 131 | //$ nobt
//$ nocpp
/**
* @file r8bconf.h
*
* @brief The "configuration" inclusion file you can modify.
*
* This is the "configuration" inclusion file for the "r8brain-free-src"
* sample rate converter. You may redefine the macros here as you see fit.
*
* r8brain-free-src Copyright (c) 2013-2014 Aleksey Vaneev
... |
0a791a8228a9c637e289fc2d8bc848e196ae5c5cc53fedf44ad9027f6bbe5a06 | C/C++ | 3,673 | 89 | #pragma once
#include "defines.hpp"
#include <openvibe/ov_all.h>
#include <toolkit/ovtk_all.h>
#include <Eigen/Dense>
#include <unsupported/Eigen/FFT>
// This class could be in its own file
class HilbertTransform
{
public:
bool transform(const Eigen::VectorXcd& in, Eigen::VectorXcd& out);
private:
Eigen::Ve... |
4ce8f8ed4c21d9204cd38a3cdf1e0a48341d323617eade8a0a370c8bfd9ec8ff | C/C++ | 3,677 | 114 | /*******************************************************************************
"A Collection of Useful C++ Classes for Digital Signal Processing"
By Vinnie Falco
Official project location:
https://github.com/vinniefalco/DSPFilters
See Documentation.cpp for contact information, notes, and bibliography.
----------... |
f440ac24b09b035f5bd2ca5cbb5a497745c393d62a9e7e370fab59c06ff37be6 | C/C++ | 3,677 | 95 | // @copyright notice: Possibly due to dependencies, this box used to be GPL before upgrade to AGPL3
#pragma once
#include "../ovp_defines.h"
#include <toolkit/ovtk_all.h>
namespace OpenViBE {
namespace Plugins {
namespace SignalProcessing {
class CModTemporalFilterBoxAlgorithm final : virtual public Toolkit::TBoxAl... |
82549159c4da8f930ede451482baebe267fc63bee7937cf1ff41902e2e14417c | C/C++ | 3,683 | 99 | #pragma once
#include "ovpCBCI2000ReaderHelper.h"
#include "../../ovp_defines.h"
#include <openvibe/ov_all.h>
#include <toolkit/ovtk_all.h>
#define OVP_ClassId_BoxAlgorithm_BCI2000Reader OpenViBE::CIdentifier(0xFF78DAF4, 0xC41544B8)
#define OVP_ClassId_BoxAlgorithm_BCI2000ReaderDesc OpenViBE::CIdentifier(0xFF53D107,... |
f3b3b6d2531a774e269327f615a4d6407e158969a28f2104db3c33f276fecc92 | C/C++ | 3,687 | 86 | #pragma once
#include "../ovp_defines.h"
#include <toolkit/ovtk_all.h>
namespace OpenViBE {
namespace Plugins {
namespace SignalProcessing {
class CBoxUnivariateStatistic final : public Toolkit::TBoxAlgorithm<IBoxAlgorithm>
{
public:
void release() override { delete this; }
bool initialize() override;
bo... |
080686d0afee4cecf27579f3a987adb052a0c75cc86026134bc83aba2023bce9 | C/C++ | 3,688 | 102 | #pragma once
#if defined(TARGET_HAS_ThirdPartyGNEEDaccessAPI)
#include "../ovasCConfigurationBuilder.h"
#include "ovasIDriver.h"
#include <gtk/gtk.h>
#include <GDSClientAPI.h>
#include <GDSClientAPI_gNautilus.h>
#include <sstream>
#include <algorithm>
namespace OpenViBE {
namespace AcquisitionServer {
/**
* \clas... |
d06680ea7f0b11034d55d47f484446be3cb21d5eb38274695d3c2412ae12d24b | C/C++ | 3,692 | 99 | #pragma once
//You may have to change this path to match your folder organisation
#include "defines.hpp"
#include <openvibe/ov_all.h>
#include <toolkit/ovtk_all.h>
// The unique identifiers for the box and its descriptor.
// Identifier are randomly chosen by the skeleton-generator.
namespace OpenViBE {
namespace Pl... |
ecd43de05a1987862f3d8aac2b334f470f11cc8b68adfed6826050878bb92811 | C/C++ | 3,695 | 170 | // Written by Oliver Serang 2009
// see license for more information
#ifndef _Vector_H
#define _Vector_H
#include <cmath>
#include "Set.h"
#include "Numerical.h"
#include "Array.h"
class Vector
{
public:
Vector()
{
}
explicit Vector(int N) :
values(N, 0.0)
{
}
explicit Vector(int N, double val)... |
34a3d9c2f6f588918fbb301b9c42d66e7a86187cd4a99453a6ac3c75f0c85d8b | C/C++ | 3,696 | 106 | #pragma once
#include "../../ovp_defines.h"
#include <openvibe/ov_all.h>
#include <toolkit/ovtk_all.h>
#include "oscpkt.h"
#include "oscpkt_udp.h"
namespace OpenViBE {
namespace Plugins {
namespace NetworkIO {
/**
* \class CBoxAlgorithmOSCController
* \author Ozan Caglayan (Galatasaray University)
* \date Thu Ma... |
f8d781c7c57ec6ce5a725c6e2d2010204879fbccd6a2bac4575556a68dac6c3e | C/C++ | 3,699 | 137 | ///-----------------------------------------------
// Copyright 2010 Wellcome Trust Sanger Institute
// Written by Jared Simpson (js18@sanger.ac.uk)
// Released under the GPL
//-----------------------------------------------
//
// ErrorCorrectProcess - Wrapper to perform error correction
// for a sequence work item
//
... |
c4e890bb48c77aea4394a6d58b7a03bb4aa55ff1dfdf532e3f4e1a81b7106173 | C/C++ | 3,709 | 108 | ///-------------------------------------------------------------------------------------------------
///
/// \file ovasCDriverBrainmasterDiscovery.h
/// \copyright Copyright (C) 2012, Yann Renard. All rights reserved.
///
/// This library is free software; you can redistribute it and/or
/// modify it under the terms ... |
93d2b3a2bb365e7db097de22a5df73d4f97fbfc891a4b1178d888b34cf6660ae | C/C++ | 3,731 | 91 | // @copyright notice: Possibly due to dependencies, this box used to be GPL before upgrade to AGPL3
#pragma once
#include "../ovp_defines.h"
#include <openvibe/ov_all.h>
#include <toolkit/ovtk_all.h>
namespace OpenViBE {
namespace Plugins {
namespace SignalProcessing {
class CDownsamplingBoxAlgorithm final : virtual... |
2d45c66e853d4c1893905df0b33cb544d85c31659207a8d972dbcf7ada5eefdb | C/C++ | 3,748 | 87 | #pragma once
#include <map>
#include <string>
#include "ovas_base.h"
#include "ovasIHeader.h"
namespace OpenViBE {
namespace AcquisitionServer {
inline static bool loadParametersFromConfig(const Kernel::IConfigurationManager& cfgManager,const std::map<std::string, OpenViBE::Parameters::ParameterTraits*> & parameter... |
37fdae1667a5366ffccfbba5583c0b195027fdd7bf7b509adc7e2d8425c6fec3 | C/C++ | 3,753 | 153 | //-----------------------------------------------
// Copyright 2010 Wellcome Trust Sanger Institute
// Written by Jared Simpson (js18@sanger.ac.uk)
// Released under the GPL
//-----------------------------------------------
//
// RLUnit - A run-length encoded unit of the FM-index
//
#ifndef RLUNIT_H
#define RLUNIT_H
... |
5fd0ac10d14a1ec7796345fca76c4ff7b26ce69dbdd5f0df3f3a36cb253310e6 | C/C++ | 3,753 | 118 | /**
* SPDX-FileCopyrightText: Inria / Gipsa-lab
* SPDX-License-Identifier: AGPL-3.0-only
*
* Ported from the Gipsa-lab g.USBamp driver (originally by Anton Andreev).
*/
#pragma once
#include <AbstractDriver.h>
#include <AbstractDriverBuilder.h>
#include <Windows.h>
#include "ringbuffer.h"
#include <openvibe/par... |
143f15da1b5722186d53e3ca386af6c1f0f09b6d6a9aca4292e9c5b19c0bb40b | C/C++ | 3,761 | 128 |
/********************
PhyloBayes MPI. Copyright 2010-2013 Nicolas Lartillot, Nicolas Rodrigue, Daniel Stubbs, Jacques Richer.
PhyloBayes is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
as published by the Free Software Foundation, either version 3 of the L... |
81ca01d7f8798b36bff32c15d665e38299cbe7aad8b7f37bb03aa9a9fd8f039a | C/C++ | 3,763 | 108 | /*******************************************************************************
"A Collection of Useful C++ Classes for Digital Signal Processing"
By Vinnie Falco
Official project location:
https://github.com/vinniefalco/DSPFilters
See Documentation.cpp for contact information, notes, and bibliography.
----------... |
131a7dbc502cf4c40fe4c34b7b16b358d8ae19267cb53844adb57ec02fe0c7fb | C/C++ | 3,768 | 97 | #pragma once
#include "../ovtk_base.h"
namespace OpenViBE {
namespace Toolkit {
template <class TAlgorithmParentClass>
class TAlgorithm : public TAlgorithmParentClass
{
public:
TAlgorithm() { }
bool initialize(Kernel::IAlgorithmContext& algorithmCtx) override
{
CScopedAlgorithm scopedAlgorithm(m... |
972230264d1f7ba9a001ef85d2aba93f59d4bdc0635e46be3776b920ea7547f3 | C/C++ | 3,775 | 71 | // dear imgui test engine
// (template for compile-time configuration)
// Replicate or #include this file in your imconfig.h to enable test engine.
// Compile Dear ImGui with test engine hooks
// (Important: This is a value-less define, to be consistent with other defines used in core dear imgui.)
#define IMGUI_ENABLE... |
e8d4a4ab3de32efba80161ee3953eae13df63a25a07609a1bfd3dd9762957a5f | C/C++ | 3,777 | 99 | #ifndef EMSCRIPTEN_BROWSER_CLIPBOARD_H_INCLUDED
#define EMSCRIPTEN_BROWSER_CLIPBOARD_H_INCLUDED
#include <string>
#include <emscripten.h>
#define _EM_JS_INLINE(ret, c_name, js_name, params, code) \
extern "C" { \
ret c_na... |
fd956c70f83d4f5472f25b7a34db6a09f81b8276fef2d8982079dd19deb248a8 | C/C++ | 3,785 | 105 | //$ nocpp
/**
* @file CDSPProcessor.h
*
* @brief The base virtual class for DSP processing algorithms.
*
* This file includes the base virtual class for DSP processing algorithm
* classes like FIR filtering and interpolation.
*
* r8brain-free-src Copyright (c) 2013-2014 Aleksey Vaneev
* See the "License.txt" ... |
13f10f90c21315ef6044abda9f98b9a22996e56591362a2fd7a3c0d0ba696fe0 | C/C++ | 3,795 | 72 | #pragma once
#include "../../ovp_defines.h"
#include "ovpCEBMLBaseEncoder.h"
namespace OpenViBE {
namespace Plugins {
namespace StreamCodecs {
class CExperimentInfoEncoder final : public CEBMLBaseEncoder
{
public:
void release() override { delete this; }
bool initialize() override;
bool uninitialize() ove... |
153d5b6efa382452f74c405a7b8c8e565a02012917d841d929cd76735e352316 | C/C++ | 3,796 | 122 | ///-------------------------------------------------------------------------------------------------
///
/// \file ProcExternalProcessingHelper.h
/// \author J. T. Lindgren.
/// \version 1.0.
/// \date 25/01/2016.
/// \copyright Copyright (C) 2022 Inria
///
/// This program is free software: you can redistribute it an... |
217088b9ce7a71a4eaea90a108ed46e609f62ad129ec1a58477666ce3caa0de8 | C/C++ | 3,801 | 134 | #pragma once
#include "ovILogListener.h"
namespace OpenViBE {
namespace Kernel {
/**
* \class ILogManager
* \brief Log manager
* \author Yann Renard (INRIA/IRISA)
* \date 2006-06-03
* \ingroup Group_Log
* \ingroup Group_Kernel
*
* The log manager is responsible for keeping a trace of all the messages the appl... |
b943aea3e5065050b0a41d0993e7a8c0ecec8c22b250b82dd2ecce5dd1043409 | C/C++ | 3,814 | 85 | ///-------------------------------------------------------------------------------------------------
///
/// \file ovtAssert.h
/// \copyright Copyright (C) 2022 Inria
///
/// This program is free software: you can redistribute it and/or modify
/// it under the terms of the GNU Affero General Public License as publishe... |
a605a7c2f7bd01e1b25c70020b183a846e14a3e99af861ff176ebe36d31e5958 | C/C++ | 3,820 | 147 |
/********************
PhyloBayes MPI. Copyright 2010-2013 Nicolas Lartillot, Nicolas Rodrigue, Daniel Stubbs, Jacques Richer.
PhyloBayes is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
as published by the Free Software Foundation, either version 3 of the L... |
709c42a489be90d0784e06af5e83353f2a3a5f150f7d8083753bb3d8945e3173 | C/C++ | 3,822 | 94 | /*
Copyright (c) 2016, Blue Brain Project
All rights reserved.
Redistribution and use in source and binary forms, with or without modification,
are permitted provided that the following conditions are met:
1. Redistributions of source code must retain the above copyright notice,
this list of conditions and the foll... |
b86ecd6c13fd32e5b7475a3612eed6404be0ac9ebc6fc54f72bf66d0586678b4 | C/C++ | 3,832 | 110 | // SPDX-FileCopyrightText: Inria <thomas.prampart@inria.fr>
// SPDX-License-Identifier: AGPL-3.0-only
#pragma once
#include <atomic>
#include "../ovp_defines.h"
#include <openvibe/ov_all.h>
#include <toolkit/ovtk_all.h>
#include <CNetwork.h>
#include <openvibe/acquisition-messaging/samples.h>
#include <queue>
#inc... |
9d0da84d71ef94b94a532fab1402bf6a8e3b92bdfb310927031485a10b64ac38 | C/C++ | 3,844 | 114 | /*
* Copyright (c) 2012 The WebRTC project authors. All Rights Reserved.
*
* Use of this source code is governed by a BSD-style license
* that can be found in the LICENSE file in the root of the source
* tree. An additional intellectual property rights grant can be found
* in the file PATENTS. All contribut... |
0be37d5ed6880ab0d87d5ffeae975adc0e4aadcfa9580bf48f7cef4f49419194 | C/C++ | 3,846 | 120 | #pragma once
#if defined TARGET_HAS_ThirdPartyGUSBampCAPI_Linux
#include <stdint.h>
#include <string.h>
#ifndef MIN
#define MIN(a, b) (((a) < (b)) ? (a) : (b))
#endif
#ifndef MAX
#define MAX(a, b) (((a) > (b)) ? (a) : (b))
#endif
template <class T>
class Queue
{
T* buffer = nullptr;
int head = 0, tail = 0... |
551e55a2c2822fba1b95a467c09ec535eafad36ad3ed4262fd7494048a1c2227 | C/C++ | 3,853 | 139 |
/********************
PhyloBayes MPI. Copyright 2010-2013 Nicolas Lartillot, Nicolas Rodrigue, Daniel Stubbs, Jacques Richer.
PhyloBayes is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
as published by the Free Software Foundation, either version 3 of the L... |
6541758c08b1ea7cd5c3560d84761b4e90f8084e12c4ae92bd20c39f4c77c917 | C/C++ | 3,871 | 103 | // SPDX-FileCopyrightText: Inria <thomas.prampart@inria.fr>
// SPDX-License-Identifier: AGPL-3.0-only
#pragma once
#include <map>
#include <QtCore>
#include <QQmlEngine>
#include <QQuickItem>
#include "QmlEngineSingleton.h"
#include "visualization/CVisualizationTree.hpp"
#include <visualization-toolkit/ovvizIWindowM... |
25ef3068658b2cead344ba973de9dc3336b8b3b36ccf4c89a9f10d7612d53860 | C/C++ | 3,874 | 128 |
/********************
PhyloBayes MPI. Copyright 2010-2013 Nicolas Lartillot, Nicolas Rodrigue, Daniel Stubbs, Jacques Richer.
PhyloBayes is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
as published by the Free Software Foundation, either version 3 of the L... |
7fa1b9ad9c4df665d03fcd44fc94194c79ef16b580f8705d6a14009d57b0f1b8 | C/C++ | 3,883 | 142 | #pragma once
#include <openvibe/ov_all.h>
#include <toolkit/ovtk_all.h>
#include "BoxAlgorithmProxy.h"
#include "Chunk.h"
#include "EncodedChunk.h"
#include "Stream.h"
namespace OpenViBE {
namespace Tracker {
/**
* \class DecoderBase
* \brief Base, non-typed abstract class for decoders
* \details Derived classes... |
1f7d656a520b9499ab1e5545ba3a11d41e1738158fda93fa20320df25e18cfcd | C/C++ | 3,902 | 149 | #include "platform.h"
#include "compiler.h"
#if defined (COMPILER_BORLAND)
#endif
/* these platforms will always use a similar gcc compiler */
#if defined (PLATFORM_LINUX) || defined (PLATFORM_OSX)
#include <sys/types.h>
#include <sys/socket.h>
#include <sys/un.h>
#include <netinet/in.h>
#include... |
a1eb79a0bdb0fd4d58c515ffccb6e67bf7675f5d281c9f24bd1e84df6b2f484c | C/C++ | 3,924 | 154 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a copy of the MPL was not distributed
// with this file, You can ob... |
b4db4268eac048ffcbf9bf20c69390c2cd040877733bf17ddc0028678d692ab5 | C/C++ | 3,941 | 69 | // dear imgui: Renderer Backend for modern OpenGL with shaders / programmatic pipeline
// - Desktop GL: 2.x 3.x 4.x
// - Embedded GL: ES 2.0 (WebGL 1.0), ES 3.0 (WebGL 2.0)
// This needs to be used along with a Platform Backend (e.g. GLFW, SDL, Win32, custom..)
// Implemented features:
// [X] Renderer: User texture b... |
e5fc5c26d3fffe03d629fedd297eaf74806db8bdd994513a8db7df9d3ced7157 | C/C++ | 3,947 | 124 | #ifndef LINE_SEARCH_H
#define LINE_SEARCH_H
#include <math.h> /* sqrt, fabs */
#pragma GCC diagnostic push
#pragma GCC diagnostic ignored "-Wredundant-decls"
#include <mkl.h> /* cblas_dnrm2 */
#pragma GCC diagnostic pop
inline int check_sign(double val) { return (0 < val) - (val < 0); }
/* Computes Scaling Factor F... |
27b93c2adb809e703a2665429132cd540fff60a22faf3a4599fb07a8fc2cb9a3 | C/C++ | 3,954 | 121 | //-----------------------------------------------
// Copyright 2009 Wellcome Trust Sanger Institute
// Written by Jared Simpson (js18@sanger.ac.uk)
// Released under the GPL license
//-----------------------------------------------
//
// Match - A pair of coordinates representing the overlapping
// regions of two seque... |
1bba8f4821c0a9cec62da5c349a234a6571b25e76372385951cce5b4d4af4a75 | C/C++ | 3,956 | 114 | /*******************************************************************************
Copyright 2006-2012 Lukas Käll <lukas.kall@scilifelab.se>
Licensed under the Apache License, Version 2.0 (the "License");
you may not use this file except in compliance with the License.
You may obtain a copy of the License at
http:... |
66153fc9301b27c6e773a492e91038db2cca76d8c949de9ed3bd93c246862c3b | C/C++ | 3,977 | 162 | //-----------------------------------------------
// Copyright 2010 Wellcome Trust Sanger Institute
// Written by Jared Simpson (js18@sanger.ac.uk)
// Released under the GPL
//-----------------------------------------------
//
// DPAlignment - Generic class for dynamic programming alignments
//
#ifndef DPALIGNMENT_H
#... |
7f647749a007be3f3a9ead9835363b4a6ed45418c2eec1809990def2299bff70 | C/C++ | 3,978 | 97 | #pragma once
#ifdef TARGET_HAS_ThirdPartyOpenViBEPluginsGlobalDefines
#include "ovp_global_defines.h"
#endif // TARGET_HAS_ThirdPartyOpenViBEPluginsGlobalDefines
//___________________________________________________________________//
// //
// Basic in... |
9a4bc6679d8fe395870fcbeccdfa9fe5585101287874cbb379447ddeca9708e1 | C/C++ | 3,984 | 128 | /*
* Copyright (C) 2008, Robert Oostenveld & Christian Hesse
* F.C. Donders Centre for Cognitive Neuroimaging, Radboud University Nijmegen,
* Kapittelweg 29, 6525 EN Nijmegen, The Netherlands
*
*/
/* prevent double include */
#ifndef BUFFER_H
#define BUFFER_H
#include <cstdlib>
#include <string.h>
#include <stdio... |
e60c4f39c76b4c6268b4e8dfb6f3c9b28fbed4bc02d7a49d1eb419b1df30eb89 | C/C++ | 3,988 | 91 | #ifndef INCLUDE_SAMPLING_FUNS
#define INCLUDE_SAMPLING_FUNS
#include <RcppArmadillo.h>
// FUNCTION DECLARATIONS
// ---------------------
arma::vec mvrnormArma(arma::vec mu, arma::mat sigma);
void sample_Z(int N,int K, arma::mat Y, arma::mat F, arma::mat W,
arma::mat G, arma::mat beta, arma::vec psi, ar... |
415ab4b0b5e7c339921991decb64df41b7835af770e0ebe4a8940d99d95f8457 | C/C++ | 3,998 | 83 | /****************************************************************************
* Copyright (C) 2014 by Taylor Arnold, Ryan Tibshirani, Veerun Sadhanala *
* *
* This file is part of the glmgen library / package. *
* ... |
69cf00c006211c230fefeacacb33d2de1ff95453eb923f675ad2719d42f5baf4 | C/C++ | 3,999 | 127 | //-----------------------------------------------
// Copyright 2009 Wellcome Trust Sanger Institute
// Written by Jared Simpson (js18@sanger.ac.uk)
// Released under the GPL
//
// SearchHistory - data structures to track
// the history of a FM-index search
//-----------------------------------------------
#ifndef SEARC... |
777443c4533ae3d1f0dc0b0846a591ae2d94d45294799d0d0d4c6f7a07425717 | C/C++ | 4,002 | 126 | #pragma once
#include "../ovkTKernelObject.h"
#include "ovkCBuffer.h"
#include <system/ovCChrono.h>
#include <vector>
#include <string>
#include <deque>
namespace OpenViBE {
namespace Kernel {
class CScheduler;
class CChunk
{
public:
CChunk() { }
CChunk(const CChunk& chunk) : m_buffer(chunk.m_buffer), m_s... |
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