sha256 stringlengths 64 64 | language stringclasses 28
values | size int32 1 491k | lines int32 1 23.2k | content stringlengths 1 200k |
|---|---|---|---|---|
bae9588f6cbce89a876c286b859570f3fd9c96ec96c13e98fcbde59568943e2e | C/C++ | 6,374 | 170 | //----------------------------------------------------------------------
// File: ANNx.h
// Programmer: Sunil Arya and David Mount
// Last modified: 03/04/98 (Release 0.1)
// Description: Internal include file for ANN
//
// These declarations are of use in manipulating some of
// the internal data objects appearing ... |
2f0244e9ced390ae5b79301a28707b60ce98fd6a81e33d7e9905379a81b70996 | C/C++ | 6,398 | 118 | /*
# =============================================================================
# Copyright (c) 2016 - 2021 Blue Brain Project/EPFL
#
# See top-level LICENSE file for details.
# =============================================================================.
*/
/*
This file is processed by mkdynam.sh and so it is imp... |
e173f44a7adf3dd58d3cf182f6936c8e82587531d2263b363633490dac000c2c | C/C++ | 6,424 | 105 | #pragma once
#include <openvibe/ov_all.h>
#include "../../ovtk_defines.h"
#include "../../ovtkIVector.h"
#include "../../ovtkIFeatureVector.h"
#include "../../ovtkIFeatureVectorSet.h"
#include "../ovtkTAlgorithm.h"
#include <xml/IXMLNode.h>
#define OVTK_ClassId_Algorithm_Classifier ... |
8880511b15b0ff3ab7567427eefbcec3602f81ad98d7a20844a39fe7c5a877d5 | C/C++ | 6,478 | 200 | /*******************************************************************************
"A Collection of Useful C++ Classes for Digital Signal Processing"
By Vinnie Falco
Official project location:
https://github.com/vinniefalco/DSPFilters
See Documentation.cpp for contact information, notes, and bibliography.
----------... |
cb36cdcda8cd50c3218f1c22129d45ab3ac473be8c471abcf253d3ceae11c273 | C/C++ | 6,493 | 163 | // SPDX-FileCopyrightText: Inria <thomas.prampart@inria.fr>
// SPDX-License-Identifier: AGPL-3.0-only
#pragma once
#include <QColor>
#include <QQuickItem>
#include <QVariantList>
#include <QVector>
#include <QtQmlIntegration/qqmlintegration.h>
#include "SDisplaySettings.h"
namespace OpenViBE {
namespace Plugins {
n... |
631e236a6c461a717a5acffebc3c6616a3f6393e6dc79aa12a6e33d7a41aa85c | C/C++ | 6,556 | 146 | #pragma once
#if defined TARGET_HAS_ThirdPartyPython2
#include <Python.h>
#if defined(PY_MAJOR_VERSION) && (PY_MAJOR_VERSION == 2)
#include "../ovp_defines.h"
#include <openvibe/ov_all.h>
#include <toolkit/ovtk_all.h>
#include <string>
#include <vector>
//#include <map>
namespace OpenViBE
{
namespace Plugins
... |
e57718b903d3fba5f96e9a26657854ca196002c93459e1241bd8d17882e0753f | C/C++ | 6,577 | 248 |
/********************
PhyloBayes MPI. Copyright 2010-2013 Nicolas Lartillot, Nicolas Rodrigue, Daniel Stubbs, Jacques Richer.
PhyloBayes is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
as published by the Free Software Foundation, either version 3 of the L... |
204aa6603f0ae66c83c80b5f35b60244bd7781506bd8e270ea7a8ab15029484b | C/C++ | 6,589 | 234 | /* -*- mode: C++; indent-tabs-mode: nil; -*-
*
* This file is a part of LEMON, a generic C++ optimization library.
*
* Copyright (C) 2003-2013
* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
* (Egervary Research Group on Combinatorial Optimization, EGRES).
*
* Permission to use, modify and distribut... |
3a6c58fea132993e88ee91a4a0926d9f5b59624cba56d81058acce5dd2ea3792 | C/C++ | 6,606 | 183 | /**
* SPDX-FileCopyrightText: Inria <thomas.prampart@inria.fr>
* SPDX-License-Identifier: AGPLL-3.0-only
*/
#pragma once
#include "ovasCAcquisitionServer.h"
#include <system/ovCTime.h>
#include <cmath> // std::abs() for Fedora
namespace OpenViBE {
namespace AcquisitionServer {
class CAcquisitionServerThread
{
publ... |
112ebd03e36e6e7d379a0a9d511a80f2e82580a5411bf0b9c3494a9b28fbe238 | C/C++ | 6,639 | 176 | /*
* Copyright 2016 The WebRTC Project Authors. All rights reserved.
*
* Use of this source code is governed by a BSD-style license
* that can be found in the LICENSE file in the root of the source
* tree. An additional intellectual property rights grant can be found
* in the file PATENTS. All contributing ... |
3be0d43dca262b02ac056126c8c7d2a13956f27abfcf27e1ed4507eec648504c | C/C++ | 6,654 | 165 | /**-------------------------------------------------------------------------------------------------
* \file CSignalDisplay.h
* \brief Classes for the Box Signal display.
* \author Bruno Renier, Yann Renard, Alison Cellard, Jussi T. Lindgren (INRIA/IRISA).
* \version 0.3.
* \copyright Copyright (C) 2022 Inria
*
... |
2834c7670c04f397d4a91496a68da6d187ef1dfb49524c40b00bd2c04b1c3a71 | C/C++ | 6,659 | 197 | /*******************************************************************************
Copyright 2006-2012 Lukas Käll <lukas.kall@scilifelab.se>
Licensed under the Apache License, Version 2.0 (the "License");
you may not use this file except in compliance with the License.
You may obtain a copy of the License at
http:... |
7419aa3b69cc7bd62584226f14fab4f3f04b01041a86a5010ca3e9f5f9b42f9f | C/C++ | 6,678 | 173 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a copy of the MPL was not distributed
// with this file, You can ob... |
05b9b5a2650a05fe0239e956fdf9a9c19c79e2aad05b013837b09e095f7bcda3 | C/C++ | 6,707 | 233 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a copy of the MPL was not distributed
// with this file, You can ob... |
0b9f0b3ca1714670f352aee25ed9fee58c2b9b052fd7bfaa28cd3cab990796dd | C/C++ | 6,738 | 177 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2009 Hauke Heibel <hauke.heibel@gmail.com>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a copy of the MPL was not distributed
// with this file, You can obtain ... |
64f126ad92cc6392a118397c48206c43b520a110bff6c9bb6961f1ce9527bf1d | C/C++ | 6,753 | 221 | //-----------------------------------------------
// Copyright 2009 Wellcome Trust Sanger Institute
// Written by Jared Simpson (js18@sanger.ac.uk)
// Released under the GPL
//-----------------------------------------------
//
// Bidirectional graph
//
#ifndef BIGRAPH_H
#define BIGRAPH_H
#include <string>
#include <... |
3dedf6f7a3af85828f51c08651f7e9a271e968ce6d70312f2e4d9c687d54d53c | C/C++ | 6,761 | 203 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2009 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a copy of the MPL was not distributed
// with this file, You can ob... |
dbe431c4a6a135811aa6cbf5fe42b2c05adff5433a1f5000f436143700f0498a | C/C++ | 6,784 | 231 | //-----------------------------------------------
// Copyright 2011 Wellcome Trust Sanger Institute
// Written by Jared Simpson (js18@sanger.ac.uk)
// Released under the GPL
//-----------------------------------------------
//
// LRAlignment - Collection of algorithms for performing
// long read matches against an FM-i... |
9d6b9833c7501ff18d29a92c2ce49cd01f04dfa70e40a34f37af5d40c35badd9 | C/C++ | 6,797 | 153 | #pragma once
#include "../ovIKernelObject.h"
namespace OpenViBE {
class CMemoryBuffer;
namespace Kernel {
class IScenario;
/**
* \class IScenarioManager
* \author Yann Renard (IRISA/INRIA)
* \date 2006-10-05
* \brief The scenario manager
* \ingroup Group_Scenario
* \ingroup Group_Kernel
*
* This manager is ... |
1438b5e0d9520240772653774f8aed1bc79d87065830bfb877a404260c4f6851 | C/C++ | 6,809 | 87 | #pragma once
#if defined(TARGET_HAS_ThirdPartyFFTW3)
#include <vector>
#include <complex>
// 1D Functions
// void* dwt(std::vector<double> &, int ,std::string , std::vector<double> &, std::vector<double> &);
void* dwt1(const std::string& wname, std::vector<double>& signal, std::vector<double>& cA, std::vector<doubl... |
5bf6f4491d1a42775e1343b3695ed42a26ac034f45447c5663fd019972487c1b | C/C++ | 6,811 | 263 | /* -*- mode: C++; indent-tabs-mode: nil; -*-
*
* This file is a part of LEMON, a generic C++ optimization library.
*
* Copyright (C) 2003-2013
* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
* (Egervary Research Group on Combinatorial Optimization, EGRES).
*
* Permission to use, modify and distribut... |
6619fdabe22e94086948bb317fee4aeb98176ed8faef7288e122645dfde71355 | C/C++ | 6,835 | 276 | /* -*- mode: C++; indent-tabs-mode: nil; -*-
*
* This file is a part of LEMON, a generic C++ optimization library.
*
* Copyright (C) 2003-2009
* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
* (Egervary Research Group on Combinatorial Optimization, EGRES).
*
* Permission to use, modify and distribut... |
3e175ae21a88bb43d6209971d953286e8b0eb1a184d2226a606cfc2a55549f74 | C/C++ | 6,869 | 238 | /* -*- mode: C++; indent-tabs-mode: nil; -*-
*
* This file is a part of LEMON, a generic C++ optimization library.
*
* Copyright (C) 2003-2013
* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
* (Egervary Research Group on Combinatorial Optimization, EGRES).
*
* Permission to use, modify and distribut... |
bb150b7e42bab6dcb8d5228b98f6861fe566711da1fbb15abfe1820605a1d6f8 | C/C++ | 6,874 | 249 |
/********************
PhyloBayes MPI. Copyright 2010-2013 Nicolas Lartillot, Nicolas Rodrigue, Daniel Stubbs, Jacques Richer.
PhyloBayes is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
as published by the Free Software Foundation, either version 3 of the L... |
bf5f0f1fe5104a4bb807682ce72b4d5a9d2dc580fc41fc5ab7c8d5d502f2c56d | C/C++ | 6,885 | 188 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2008-2010 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a copy of the MPL was not distributed
// with this file, You c... |
a26ffa11b917f87d7b07ca1766f7a85b82d3922c809a56d15e0c6d0d9bcd17e9 | C/C++ | 6,959 | 210 | //-----------------------------------------------
// Copyright 2009 Wellcome Trust Sanger Institute
// Written by Jared Simpson (js18@sanger.ac.uk)
// Released under the GPL license
//-----------------------------------------------
//
// bucketSort - perform a bucket sort over a range of values
//
#ifndef BUCKETSORT_H... |
154b92e791a868321739b47260e808bd1a7ab095b75c8a6766e557ae90aa49d6 | C/C++ | 6,976 | 184 | /*
Copyright (c) 2016, Blue Brain Project
All rights reserved.
Redistribution and use in source and binary forms, with or without modification,
are permitted provided that the following conditions are met:
1. Redistributions of source code must retain the above copyright notice,
this list of conditions and the foll... |
3b8f8105c6b1621cad84f5335b93c019e3c5a43035f169cabefab97789a6dec2 | C/C++ | 6,979 | 180 | // SPDX-FileCopyrightText: Inria <thomas.prampart@inria.fr>
// SPDX-License-Identifier: AGPL-3.0-only
#pragma once
#include <QColor>
#include <QElapsedTimer>
#include <QJSValue>
#include <QObject>
#include <QPointer>
#include <QQuickItem>
#include <QStringList>
#include <QTimer>
#include <QVariantList>
#include <QVec... |
8eaed707e6bfc2857dffe0dd62ae4129dab917b95d5af731b21c4379b03ef377 | C/C++ | 6,979 | 194 | /*******************************************************************************
"A Collection of Useful C++ Classes for Digital Signal Processing"
By Vinnie Falco
Official project location:
https://github.com/vinniefalco/DSPFilters
See Documentation.cpp for contact information, notes, and bibliography.
----------... |
3ff8deef168d59249c910b8d452046ccd5d0de9d9aef2d732b642761aa979bf5 | C/C++ | 7,037 | 173 | #pragma once
#include <sstream>
#include <map>
#include <memory>
#include <unordered_map>
#include <vector>
#include <mutex>
#include <cstdio> // std::snprintf in next_bp_id()
#include <string>
#include "SvabaBamWalker.h"
#include "SvabaLogger.h"
#include "SvabaOptions.h"
#include "AlignedContig.h"
#include "Discor... |
1a1666e4b8ef43090dc4aa008648e1356a2929733d2c6a16715bea5645fb758d | C/C++ | 7,054 | 213 | #pragma once
#include "../ovp_defines.h"
#include "../ovp_gdf_helpers.h"
#include <openvibe/ov_all.h>
#include <toolkit/ovtk_all.h>
#include <fstream>
#include <string>
#include <vector>
#define GDFReader_ExperimentInfoOutput 0
#define GDFReader_SignalOutput 1
#define GDFReader_StimulationOutput 2
na... |
dffaf11d88555f3715b3e99dd50eea76a9bcdecc4ff4033e472eaf405c125e1e | C/C++ | 7,061 | 280 |
/********************
PhyloBayes MPI. Copyright 2010-2013 Nicolas Lartillot, Nicolas Rodrigue, Daniel Stubbs, Jacques Richer.
PhyloBayes is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
as published by the Free Software Foundation, either version 3 of the L... |
b5cbce0df5673cd5c85dcb45c72dfb69dfcfbbef90b90d88951af1c3874128c4 | C/C++ | 7,067 | 130 | #ifndef LEPTON_PARSED_EXPRESSION_H_
#define LEPTON_PARSED_EXPRESSION_H_
/* -------------------------------------------------------------------------- *
* Lepton *
* -------------------------------------------------------------------------- *
* This... |
9d53a04ffb31032157a860a0dbf0d431e5ca7acd0df533cba728e85034f61aac | C/C++ | 7,089 | 215 | #pragma once
#include "ovIParameter.h"
#include "ovIConfigurable.h"
namespace OpenViBE {
namespace Kernel {
/**
* \class TParameterHandler
* \brief Helper class in order to manipulate IParameter and IParameter values natively
* \author Yann Renard (INRIA/IRISA)
* \date 2007-11-21
* \ingroup Group_Kernel
* \ingr... |
33118e111e74243f1be0842078a38324248214717a109cf939a0b6946167e575 | C/C++ | 7,108 | 160 | #pragma once
/**
* @file DriverBuilder.h
* @brief Header file for the DriverBuilder class.
*
* This file defines the `DriverBuilder` class, which is a template class for
* creating driver builders. It inherits from `AbstractDriverBuilder` and
* implements methods to create and manage driver instances.
*/
#incl... |
5129c5f1a13c7909b0ae1a62dfcbeaaaf84e817d4ed2535ae52b27076472e669 | C/C++ | 7,113 | 332 | /* -*- mode: C++; indent-tabs-mode: nil; -*-
*
* This file is a part of LEMON, a generic C++ optimization library.
*
* Copyright (C) 2003-2013
* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
* (Egervary Research Group on Combinatorial Optimization, EGRES).
*
* Permission to use, modify and distribut... |
59e20248f1aac8fa7ccd054d4e04de391eeb98f6312e7136eb00ef8dc7841682 | C/C++ | 7,123 | 196 | #pragma once
#include "../ovIKernelObject.h"
namespace OpenViBE {
namespace Kernel {
class IScenario;
class IConfigurationManager;
enum class EPlayerStatus { Stop, Pause, Step, Play, Forward };
enum class EPlayerReturnCodes { Success, Failed, BoxInitializationFailed };
inline std::string toString(const EPlayerStat... |
2423c1be44767c9ca28a0cc67c22b0eb115d264c2dd753d0d8522bb8eb0b5eed | C/C++ | 7,129 | 251 | /* -*- mode: C++; indent-tabs-mode: nil; -*-
*
* This file is a part of LEMON, a generic C++ optimization library.
*
* Copyright (C) 2003-2013
* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
* (Egervary Research Group on Combinatorial Optimization, EGRES).
*
* Permission to use, modify and distribut... |
90c26e37534fbf774866565553b49154721583fbacc37049c7a85dda1f36202c | C/C++ | 7,130 | 282 |
/********************
PhyloBayes MPI. Copyright 2010-2013 Nicolas Lartillot, Nicolas Rodrigue, Daniel Stubbs, Jacques Richer.
PhyloBayes is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
as published by the Free Software Foundation, either version 3 of the L... |
ae3f6b67e777e87c581ffab64286bf8573864cd4d90edbeb6b5f84903457ee01 | C/C++ | 7,131 | 169 | /*
Copyright (c) 2017. The YARA Authors. All Rights Reserved.
Redistribution and use in source and binary forms, with or without modification,
are permitted provided that the following conditions are met:
1. Redistributions of source code must retain the above copyright notice, this
list of conditions and the followi... |
3ef401af0d40d4f5b07601035fb71317cbeab3253fddb6ba60d2246425eb5fd7 | C/C++ | 7,192 | 195 | #pragma once
#include <algorithm>
#include "SeqLib/BWAAligner.h"
#include "SeqLib/BamReader.h"
#include "SeqLib/BamRecord.h"
#include "SeqLib/BamWriter.h"
#include "BreakPoint.h"
#include "DiscordantCluster.h"
#include "AlignmentFragment.h"
#include "SvabaRead.h"
class R2CDatabase; // forward decl; full def in R2C... |
0126537109317e857a88927a9c4877d1b7743382a17e41101865be2221a83e02 | C/C++ | 7,194 | 163 | #pragma once
/**
* SPDX-FileCopyrightText: Inria <florent.leray@inria.fr>
* SPDX-License-Identifier: AGPL-3.0-only
*/
/**
* @file Acquisition.h
* @brief Header file for the Acquisition class.
*
* This file declares the `Acquisition` class, which is responsible for managing
* the acquisition of data from a hard... |
ac10d2ce957c5fd701e821543016886c50c8e33f17963a7b6113dc1e5a22c209 | C/C++ | 7,205 | 166 | #pragma once
#include "SeqLib/BamRecord.h"
#include <vector>
#include <string_view>
#include <unordered_map>
using SeqLib::BamRecordPtr;
using SeqLib::BamRecordPtrVector;
/** Store information about a read to contig alignment */
struct r2c {
int32_t start_on_contig = 0; // start pos on contig (from r.Position(... |
ff738442bd43c1ff302d2867df137fbb0ce661ccdfd546783e4d072f062f6339 | C/C++ | 7,240 | 286 |
/********************
PhyloBayes MPI. Copyright 2010-2013 Nicolas Lartillot, Nicolas Rodrigue, Daniel Stubbs, Jacques Richer.
PhyloBayes is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
as published by the Free Software Foundation, either version 3 of the L... |
ea8de39b2932a2abb02a4514b56f74188dcfb47693f79176d597db9ef0a16301 | C/C++ | 7,246 | 183 | #pragma once
#include "ovas_base.h"
#include "ovasIDriver.h"
#include "ovasIHeader.h"
#include "ovasCDriftCorrection.h"
#include <socket/IConnectionServer.h>
#include <mutex>
#include <thread>
#include <vector>
#include <list>
#include <deque>
namespace OpenViBE {
namespace AcquisitionServer {
class CConnectionSer... |
077ea294b7cd70f3864501e85960dd02013cc76994c1cabec6e513016940b7db | C/C++ | 7,290 | 181 | // SPDX-FileCopyrightText: Inria <tristan.cabel@inria.fr>
// SPDX-License-Identifier: AGPL-3.0-only
#pragma once
#include <openvibe/ov_all.h>
#include <QtCore>
#include <QtQml>
#include <QJSValue>
#include <QPointF>
#include <parametersObject.h>
#include "IOPort.h"
namespace OpenViBE {
namespace Designer {
class B... |
4029c6c92160bb5732751aed5aab4053a7e34ac9e00250922bc2885ada9f194a | C/C++ | 7,294 | 219 | /*******************************************************************************
"A Collection of Useful C++ Classes for Digital Signal Processing"
By Vinnie Falco
Official project location:
https://github.com/vinniefalco/DSPFilters
See Documentation.cpp for contact information, notes, and bibliography.
----------... |
7ab1d75cd6739049367c7511b7bfc29cc04b3cba01660ec97b89e00c4e860fb5 | C/C++ | 7,306 | 244 | /* -*- mode: C++; indent-tabs-mode: nil; -*-
*
* This file is a part of LEMON, a generic C++ optimization library.
*
* Copyright (C) 2003-2009
* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
* (Egervary Research Group on Combinatorial Optimization, EGRES).
*
* Permission to use, modify and distribut... |
abc74bd7ccbfee142fc37741d55cbb44fb646f54625a6dbd801df363cc48b221 | C/C++ | 7,348 | 128 | #pragma once
#include <openvibe/ov_all.h>
#include <toolkit/ovtk_all.h>
#include <xml/IXMLNode.h>
#include <stack>
#include "../../../../../contrib/packages/libSVM/svm.h"
#define OVP_ClassId_Algorithm_ClassifierSVM CIdentifier(0x50486EC2, 0x6F2417FC)
#define OVP_ClassId_Algorithm... |
ffe7e1de92a26b62f01513b9f841890c168c396334b64549451dedbe08f397fa | C/C++ | 7,415 | 174 | /**
* SPDX-FileCopyrightText: Inria <thomas.prampart@inria.fr>
* SPDX-License-Identifier: AGPL-3.0-only
*/
#pragma once
#include <map>
#include <optional>
#include <string>
#include <vector>
#include <nlohmann/json.hpp>
#include <openvibe/parameters/parameters.h>
class ISettingsProvider;
namespace OpenViBE {
... |
26edd52b23dce784f046f90e6aea812176bfb48d80d63bca45751518f0b6fd53 | C/C++ | 7,433 | 206 | /*******************************************************************************
"A Collection of Useful C++ Classes for Digital Signal Processing"
By Vinnie Falco
Official project location:
https://github.com/vinniefalco/DSPFilters
See Documentation.cpp for contact information, notes, and bibliography.
----------... |
8060b9b3b4d3ea82852830dd500c11d4dce4eea0a14ad7d528b24f450512c716 | C/C++ | 7,437 | 198 | /****
DIAMOND protein sequence aligner
Copyright (C) 2012-2026 Benjamin J. Buchfink
This program is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later vers... |
5e15801525e414ca5165cfd581354f61b39ae1c5732442556afef7f4b2fa7566 | C/C++ | 7,496 | 314 | /*
* Vector3.h
*
* Created by Thomas Fritz
* Copyright Institute for Biomedical Engineering, Karlsruhe Institute of Technology (KIT). All rights reserved.
*
*/
#ifndef VECTOR3_H
#define VECTOR3_H
#include <cmath>
#include <iomanip>
#include <iostream>
#include <initializer_list>
#include "Matrix3.h"
// forw... |
f0ee8bded9206c256bdee2b35be3a4a13b7cd3a4541d4e59fd2fdfbe32a5a1a1 | C/C++ | 7,497 | 250 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2006-2008 Benoit Jacob <jacob.benoit.1@gmail.com>
// Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If ... |
030828c4b826690dd4c36cbc73af14f17ab5656c633eb5e66f192a1e648b0f7d | C/C++ | 7,500 | 241 | //
// OpenViBE Tracker
//
#pragma once
#include <openvibe/ov_all.h>
#include <toolkit/ovtk_all.h>
#include <iostream>
#include <memory> // shared_ptr
#include <mensia/advanced-visualization.hpp>
#include <TGtkGLWidget.hpp>
#include <IRuler.hpp>
#include "Stream.h"
#include "Contexted.h"
typedef struct _GtkWidget... |
18ec119461dfb136a3fb32a853505e74220b989f89c809a13df951b90b873382 | C/C++ | 7,500 | 303 | #ifndef NRN_SECTION_MAPPING
#define NRN_SECTION_MAPPING
#include <string>
#include <vector>
#include <map>
#include <iostream>
namespace coreneuron {
/** type to store every section and associated segments */
typedef std::vector<int> segvec_type;
typedef std::map<int, segvec_type> secseg_map_type;
typedef secseg_map... |
bd3ff3c9d6f525f3ca9f120de88e7aeac54b73434cd5511b5f3228dc12bd66b6 | C/C++ | 7,537 | 129 | #ifndef BLAS_H
#define BLAS_H
/** \file blas.h
* \brief Header file for Fortran BLAS.
*/
#define F77_CALL(x) x##_
#define F77_NAME(x) F77_CALL(x)
#ifdef __cplusplus
extern "C" {
#endif
/* Level 1 BLAS */
extern double F77_NAME(dasum)(const int *n, const double *dx, const int *incx);
extern void F77_NAME(daxpy... |
0a771d5d94d240c9eaad45777c3eef162565d337964b96f0feabab6c9c3d35bc | C/C++ | 7,539 | 157 | #pragma once
#include "ovvizIVisualizationWidget.h"
namespace OpenViBE {
namespace VisualizationToolkit {
/**
* \brief Drag locations around a widget
*/
enum class EDragLocation { Left, Right, Top, Bottom };
/**
* \brief Node types in a visualization tree
*/
enum class EVisualizationTreeNode
{
... |
861b33ca519ecf4e9d20b6ab2c71d1710ec009941938833cacd80efe7d4f2ef5 | C/C++ | 7,543 | 238 | #pragma once
#include "../ovp_defines.h"
#include <toolkit/ovtk_all.h>
namespace OpenViBE {
namespace Plugins {
namespace Examples {
class CLog final : public Toolkit::TBoxAlgorithm<IBoxAlgorithm>
{
public:
void release() override { delete this; }
uint64_t getClockFrequency() override { return 1LL << 32; }
... |
4834da7ac2bca235bf1e752c8bb982f4fb4d5670d207902ea6831beb75dab013 | C/C++ | 7,547 | 214 | /* -*- mode: C++; indent-tabs-mode: nil; -*-
*
* This file is a part of LEMON, a generic C++ optimization library.
*
* Copyright (C) 2003-2013
* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
* (Egervary Research Group on Combinatorial Optimization, EGRES).
*
* Permission to use, modify and distribut... |
c53298afe7750e905e628a08d1503d8726feb2c03f4298b75f429a37dca79db3 | C/C++ | 7,550 | 190 | #pragma once
#include "ovas_base.h"
#include "ovasIDriver.h"
#include "ovasIHeader.h"
#include "ovasCDriftCorrection.h"
#include <socket/IConnectionServer.h>
#include <deque>
#include <functional>
#include <list>
#include <mutex>
#include <thread>
#include <vector>
namespace OpenViBE {
namespace AcquisitionServer {... |
5fc663b1765984b29d1d24bb93f7781126cd49221b6ec6bad0c077954505756c | C/C++ | 7,558 | 243 | #pragma once
#include "StreamBundle.h"
#include "ProcExternalProcessing.h"
#include <openvibe/ov_all.h>
#include "WorkspaceNotes.h"
#include "Selection.h"
#include "ParallelExecutor.h"
namespace OpenViBE {
namespace Tracker {
/**
* \class Workspace
* \brief Workspace is a set of Tracks (StreamBundles) that con... |
c645731a2feb837283720102d25c87f07e55b73ab1767e481548c83cb0b8f9bd | C/C++ | 7,565 | 263 | /*
# =============================================================================
# Copyright (c) 2016 - 2022 Blue Brain Project/EPFL
#
# See top-level LICENSE file for details.
# =============================================================================.
*/
#pragma once
#include <cstdint>
#include <cstring>
#inc... |
a95b7267c301abf54f825dcde4e86d762c60afe993c58027aac233890408555c | C/C++ | 7,582 | 208 | #pragma once
#include <openvibe/ov_all.h>
#include <toolkit/ovtk_all.h>
#include <vector>
#include <list>
// The unique identifiers for the box and its descriptor.
// Identifier are randomly chosen by the skeleton-generator.
#define OVP_ClassId_BoxAlgorithm_SignalConcatenation OpenViBE::CIdentifier(0x372F3A9D, 0x49E2... |
254d39e6210bb2c9dce54592819084b087cdeb58058e598d637855b6f42e2211 | C/C++ | 7,592 | 227 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2012 Désiré Nuentsa-Wakam <desire.nuentsa_wakam@inria.fr>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a copy of the MPL was not distributed
// with this file, ... |
d85933ff845a5b30c86bae5f04a8cea66ee64a45f69f75b425f931000450de21 | C/C++ | 7,594 | 218 | #ifndef PMD_H
#define PMD_H
#include "utils.h"
#pragma GCC diagnostic push
#pragma GCC diagnostic ignored "-Wredundant-decls"
#include <mkl.h>
#pragma GCC diagnostic pop
#include <mkl_dfti.h>
#include <vector>
class PMD_params {
private:
const MKL_INT bheight;
const MKL_INT bwidth;
MKL_INT d_sub;
... |
8dcd189d1cfc28e691b2898fb913b10a76fe98b119e9b406a67eefe8f5012e00 | C/C++ | 7,601 | 242 | /* -*- mode: C++; indent-tabs-mode: nil; -*-
*
* This file is a part of LEMON, a generic C++ optimization library.
*
* Copyright (C) 2003-2009
* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
* (Egervary Research Group on Combinatorial Optimization, EGRES).
*
* Permission to use, modify and distribut... |
8303001e539825baf1a2b7ac62e9a04aa86b094339cb5be0b809ceb55043d0b4 | C/C++ | 7,656 | 219 | //-----------------------------------------------
// Copyright 2009 Wellcome Trust Sanger Institute
// Written by Jared Simpson (js18@sanger.ac.uk)
// Released under the GPL license
//-----------------------------------------------
//
// OverlapBlock - Data structures holding
// the result of the alignment of a sequenc... |
8ffa1401a1e52b5afe251332633790434f633d089a6f54a26fd6ab7acd6f01cf | C/C++ | 7,675 | 180 | #pragma once
#include "../ovIKernelObject.h"
namespace OpenViBE {
namespace Kernel {
class IParameter;
/**
* \class IAlgorithmProxy
* \brief Application interface to an algorithm plugin
* \author Yann Renard (INRIA/IRISA)
* \date 2007-11-21
* \ingroup Group_Algorithm
* \ingroup Group_Kernel
* \sa Plugins::IAl... |
794d8df7c99e103940c1616de6e15f18daacc789d13acc56e64f695f87056f1c | C/C++ | 7,808 | 218 | ///-------------------------------------------------------------------------------------------------
///
/// \file Stream.h
/// \author J. T. Lindgren / Inria.
/// \copyright Copyright (C) 2022 Inria
///
/// This program is free software: you can redistribute it and/or modify
/// it under the terms of the GNU Affero G... |
580c52c3adf522d211039c53f99ff7da2f414c473f599aa1a4580354b10b716d | C/C++ | 7,831 | 173 | // ContigAlignmentScore.h
//
// Composite quantitative reliability score for a single contig-to-genome
// alignment. The idea is: once a contig has been aligned back to the
// reference (via BWAWrapper in SvabaRegionProcessor), we want a single
// float in [0, 1] that summarizes "is this a clean alignment I should
// t... |
4bb0a32b8c1f23dd2c248d1c1616a54380e66cf7f406e8885ea336872cb82d2e | C/C++ | 7,844 | 190 | #pragma once
#include "../ovIKernelObject.h"
namespace OpenViBE {
namespace Kernel {
/**
* \class IBoxIO
* \author Yann Renard (INRIA/IRISA)
* \date 2006-06-21
* \brief Main OpenViBE box interface to communicate with the kernel
* \ingroup Group_Scenario
* \ingroup Group_Kernel
*
* This context allows the obje... |
e9b400dd7ac12821684589a8c13c48f91f79f9f68e599bf045f55c0eba5445e8 | C/C++ | 7,845 | 204 |
/********************
PhyloBayes MPI. Copyright 2010-2013 Nicolas Lartillot, Nicolas Rodrigue, Daniel Stubbs, Jacques Richer.
PhyloBayes is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
as published by the Free Software Foundation, either version 3 of the L... |
8a1b15eddc55d1de4be9dd76369cd82ca7eaf2b97a328c80598ba92f32238148 | C/C++ | 7,860 | 278 | /*******************************************************************************
"A Collection of Useful C++ Classes for Digital Signal Processing"
By Vinnie Falco
Official project location:
https://github.com/vinniefalco/DSPFilters
See Documentation.cpp for contact information, notes, and bibliography.
----------... |
df151af64f66daab2aa02c63e7a5269e73e1f8ec348a4188b9553aab484bfa16 | C/C++ | 7,886 | 292 | /* -*- mode: C++; indent-tabs-mode: nil; -*-
*
* This file is a part of LEMON, a generic C++ optimization library.
*
* Copyright (C) 2003-2013
* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
* (Egervary Research Group on Combinatorial Optimization, EGRES).
*
* Permission to use, modify and distribut... |
49357739945f7afb9850c0773062b03bc438eecee4a78f2b2908d5d71f188e86 | C/C++ | 7,936 | 254 | /* -*- mode: C++; indent-tabs-mode: nil; -*-
*
* This file is a part of LEMON, a generic C++ optimization library.
*
* Copyright (C) 2003-2013
* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
* (Egervary Research Group on Combinatorial Optimization, EGRES).
*
* Permission to use, modify and distribut... |
ff33ef76559e1154f6a277ef0fba97d7998ee6bd27db1ab08684d2f8cbb246b2 | C/C++ | 7,940 | 355 | #ifndef LINEQN_H
#define LINEQN_H
/*
* Szymon Rusinkiewicz
* Princeton University
* lineqn.h
* Solution of systems of linear equations and eigenvalue decomposition.
* Some are patterned after the code in Numerical Recipes, but with a bit of
* the fancy C++ template thing happening.
* */
#include <cmath>
#includ... |
6e841079eedf886f5e946a9679221cd2f2fc3c52d181998b3bb2bc9ada9928bc | C/C++ | 8,054 | 266 | /*
* Copyright (C) 2008, Robert Oostenveld & Christian Hesse
* F.C. Donders Centre for Cognitive Neuroimaging, Radboud University Nijmegen,
* Kapittelweg 29, 6525 EN Nijmegen, The Netherlands
*
*/
/* prevent double include */
#ifndef MESSAGE_H
#define MESSAGE_H
#include "platform_includes.h"
#ifdef __cplusplus... |
752d53677f1537534db61c018b43af65ca02b44ebe17246be82a5d9822b4db00 | C/C++ | 8,097 | 249 | /* -*- mode: C++; indent-tabs-mode: nil; -*-
*
* This file is a part of LEMON, a generic C++ optimization library.
*
* Copyright (C) 2003-2009
* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
* (Egervary Research Group on Combinatorial Optimization, EGRES).
*
* Permission to use, modify and distribut... |
0d4537a90da2a5e96471d8f0be1cbc4133a5517f95f3f70ef070a0daa3cf5715 | C/C++ | 8,100 | 134 | // dear imgui test engine
// (performance tool)
// Browse and visualize samples recorded by ctx->PerfCapture() calls.
// User access via 'Test Engine UI -> Tools -> Perf Tool'
// This file is governed by the "Dear ImGui Test Engine License".
// Details of the license are provided in the LICENSE.txt file in the same di... |
2fc19f07b207c547fa56e36de27a15406493279e8cc4e4b4ffdb8f91b5ad5d9a | C/C++ | 8,108 | 227 | /* The MIT License
Copyright (c) 2008 Genome Research Ltd (GRL).
Permission is hereby granted, free of charge, to any person obtaining
a copy of this software and associated documentation files (the
"Software"), to deal in the Software without restriction, including
without limitation the rights to use... |
b04296fa0cb24905cfa26fba6cc0de051bda740a4ffcbfc57ef6a0c4f1dbed66 | C/C++ | 8,143 | 147 | /**
k2c_include.h
This file is part of keras2c
Copyright 2020 Rory Conlin
Licensed under MIT License
https://github.com/f0uriest/keras2c
*/
#pragma once
#include <stdlib.h>
#include "k2c_tensor_include.h"
// Activations
void k2c_linear_func(float * x, const size_t size);
void k2c_exponential_func(float * x, const ... |
39b1c164255d651727b6f42c1524987d1f68abf6d017c4c8561fd749bd0dea2d | C/C++ | 8,152 | 147 | /**
k2c_include.h
This file is part of keras2c
Copyright 2020 Rory Conlin
Licensed under MIT License
https://github.com/f0uriest/keras2c
*/
#pragma once
#include <stdlib.h>
#include "k2c_tensor_include.h"
// Activations
void k2c_linear_func(float * x, const size_t size);
void k2c_exponential_func(float * x, const ... |
761c5054d09ef97b1234a6e47a5dc986b35f51e6049e16a5fdead16573daff55 | C/C++ | 8,250 | 344 |
/********************
PhyloBayes MPI. Copyright 2010-2013 Nicolas Lartillot, Nicolas Rodrigue, Daniel Stubbs, Jacques Richer.
PhyloBayes is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
as published by the Free Software Foundation, either version 3 of the L... |
a1e4a918cdfdc82d11ca38575d099b7acd2f857b850eb307ab8363f1b034e27b | C/C++ | 8,278 | 215 | ///-------------------------------------------------------------------------------------------------
///
/// \file CBoxAlgorithmErpPlot.hpp
/// \brief Classes for the Box ERP plot.
/// \author Dieter Devlaminck (INRIA).
/// \version 1.1.
/// \date 16/11/2012
/// \copyright Copyright (C) 2022 Inria
///
/// This program... |
d5ff0da58d86f743a20ead4e2dea9bda94fb2e2a5ddfcdfc13fb0311d66eca6e | C/C++ | 8,279 | 248 | #pragma once
#include "../ovIKernelObject.h"
namespace OpenViBE {
namespace Kernel {
/// <summary> Log Levels. </summary>
enum ELogLevel
{
LogLevel_First,
LogLevel_None,
LogLevel_Debug,
LogLevel_Benchmark,
LogLevel_Trace,
LogLevel_Info,
LogLevel_Warning,
LogLevel_ImportantWarning,
... |
15b8411e77d88e71ba7a1912d68df1e21da9269d0aadf5232ffd47991584a263 | C/C++ | 8,322 | 244 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2007-2010 Benoit Jacob <jacob.benoit.1@gmail.com>
// Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If ... |
797805dc73e8b0ab410e4342fba726a2410f412b041d0481d34123f48b232c6d | C/C++ | 8,335 | 197 | //-----------------------------------------------
// Copyright 2009 Wellcome Trust Sanger Institute
// Written by Jared Simpson (js18@sanger.ac.uk)
// Released under the GPL
//-----------------------------------------------
//
// BWTAlgorithms.h - Algorithms for aligning to a bwt structure
//
#ifndef BWT_ALGORITHMS_H
#... |
6fc4b9bc031d9e2786e4e1e55eedac4f4dad4d0733ad637913ca2128802e6689 | C/C++ | 8,336 | 283 | //-----------------------------------------------
// Copyright 2009 Wellcome Trust Sanger Institute
// Written by Jared Simpson (js18@sanger.ac.uk)
// Released under the GPL license
//-----------------------------------------------
//
// Util - Common data structures and functions
//
#ifndef UTIL_H
#define UTIL_H
#inc... |
63edba57c429abc9957d19743053a1ff98a72b10e3eb299ff24942aba08298f8 | C/C++ | 8,345 | 226 | //----------------------------------------------------------------------
// File: ANNperf.h
// Programmer: Sunil Arya and David Mount
// Last modified: 03/04/98 (Release 0.1)
// Description: Include file for ANN performance stats
//
// Some of the code for statistics gathering has been adapted
// from the SmplStat.h... |
ac3793ce19ff5d26cf6f2a871be97090c03e0b9619e8bd3998720db4b0854492 | C/C++ | 8,348 | 224 | /*
FastQTL: Fast and efficient QTL mapper for molecular phenotypes
Copyright (C) 2015 Olivier DELANEAU, Alfonso BUIL, Emmanouil DERMITZAKIS & Olivier DELANEAU
This program is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foun... |
3ff640b6a9cdfc1bb223602fcff18850e1fa048718fd4a39c0a678e2e449685f | C/C++ | 8,379 | 95 | #pragma once
// Boxes
//---------------------------------------------------------------------------------------------------
#define OVP_ClassId_GDFFileReader OpenViBE::CIdentifier(0x3EEB1264, 0x4EDFBD9A)
#define OVP_ClassId_GDFFileReaderDesc ... |
6d2a6e03a54cfab8627951834cb83b109ac8e955029658d7958a6b062a17bacd | C/C++ | 8,394 | 113 | #pragma once
// Global Class Identifiers
//---------------------------------------------------------------------------------------------------
#define OVK_ClassId_KernelDesc OpenViBE::CIdentifier(0x02F2D050, 0x25CD9EE5)
// Kernel Class Identifiers
//-----------------------------------... |
a64e5f729cb0866958a5216c54852ac1e246351070cbe02ce5b0dc31ade931ca | C/C++ | 8,410 | 312 | //FastQTL: Fast and efficient QTL mapper for molecular phenotypes
//Copyright (C) 2015 Olivier DELANEAU, Alfonso BUIL, Emmanouil DERMITZAKIS & Olivier DELANEAU
//
//This program is free software: you can redistribute it and/or modify
//it under the terms of the GNU General Public License as published by
//the Free Soft... |
7c137d14d0d918622b9ee56dc675849abc70ecf077be3d18ae18a0ab87e813ec | C/C++ | 8,429 | 372 |
/********************
PhyloBayes MPI. Copyright 2010-2013 Nicolas Lartillot, Nicolas Rodrigue, Daniel Stubbs, Jacques Richer.
PhyloBayes is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
as published by the Free Software Foundation, either version 3 of the L... |
a7be8275ab3c4718f9ec67d0e6796184c404990d5332fd6e8abad010be0808d8 | C/C++ | 8,473 | 231 | #pragma once
#include "ovIPluginObject.h"
namespace OpenViBE {
namespace Kernel {
/**
* \brief This enum lists all the way a box can be modified
* \sa Plugins::IBoxListener::process
*/
enum class EBoxModification
{
Initialized, DefaultInitialized,
NameChanged, IdentifierChanged, AlgorithmClassIdentifierCh... |
c7e2ac7d0e9614fc224d4b6d93be62f098408ae3bd8a786193e67f6b8d2535bd | C/C++ | 8,479 | 197 | #pragma once
#include "../ovIKernelObject.h"
namespace OpenViBE {
namespace Plugins {
class IPluginObject;
class IPluginObjectDesc;
class IBoxAlgorithm;
class IBoxAlgorithmDesc;
class IAlgorithm;
class IAlgorithmDesc;
} // namespace Plugins
namespace Kernel {
// class IPluginModule;
/**
* \class IPluginManager
... |
29464e5e96f456fab439370a2f5313e74e7ee26b373a849503464a63b17db9fc | C/C++ | 8,502 | 424 | // Written by Oliver Serang 2009
// see license for more information
// this class behaves like vector, except it has
// added functionality to map functions over the
// Array
#ifndef _Array_H
#define _Array_H
#include <iostream>
#include <vector>
#include <cmath>
#include <string>
#include <sstream>
#include <algor... |
e981407a42eb0367e78f95757b878146ce405204314508b96b11c0157c6532dd | C/C++ | 8,521 | 249 | /*******************************************************************************
"A Collection of Useful C++ Classes for Digital Signal Processing"
By Vinnie Falco
Official project location:
https://github.com/vinniefalco/DSPFilters
See Documentation.cpp for contact information, notes, and bibliography.
----------... |
1d167d01f822af44686abbc87709868b0eabc7f7171328e2114eb9704822ce32 | C/C++ | 8,522 | 335 |
/********************
PhyloBayes MPI. Copyright 2010-2013 Nicolas Lartillot, Nicolas Rodrigue, Daniel Stubbs, Jacques Richer.
PhyloBayes is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
as published by the Free Software Foundation, either version 3 of the L... |
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