sha256 stringlengths 64 64 | language stringclasses 28
values | size int32 1 491k | lines int32 1 23.2k | content stringlengths 1 200k |
|---|---|---|---|---|
e0a32a79a9fca29eb3df2825fc13bfeac4cfa3173f69789e3b1a1750cddfed7c | C/C++ | 8,528 | 287 | /* -*- mode: C++; indent-tabs-mode: nil; -*-
*
* This file is a part of LEMON, a generic C++ optimization library.
*
* Copyright (C) 2003-2013
* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
* (Egervary Research Group on Combinatorial Optimization, EGRES).
*
* Permission to use, modify and distribut... |
88df6b9ff1c816452c44844e062561048b93c5ec82cb7fe7e786b19d034550f2 | C/C++ | 8,559 | 276 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2011 Gael Guennebaud <gael.guennebaud@inria.fr>
// Copyright (C) 2012 Désiré Nuentsa-Wakam <desire.nuentsa_wakam@inria.fr>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. ... |
c945b79dfd5a8807a9d6feb774b3288d2abc55457769902e42c104bb1ae85726 | C/C++ | 8,572 | 177 | //-----------------------------------------------
// Copyright 2009 Wellcome Trust Sanger Institute
// Written by Jared Simpson (js18@sanger.ac.uk)
// Released under the GPL
//-----------------------------------------------
//
// svabaOverlapAlgorithm - This class implements all the logic
// for finding and outputting ... |
0f13f6e98634ff7db30a19e2f42a36951918238a232b9abb4ae089343d29408f | C/C++ | 8,583 | 178 | //-----------------------------------------------
// Copyright 2009 Wellcome Trust Sanger Institute
// Written by Jared Simpson (js18@sanger.ac.uk)
// Released under the GPL
//-----------------------------------------------
//
// OverlapAlgorithm - This class implements all the logic
// for finding and outputting overl... |
946ccd47a74d20d3b7e6007f8c359eef8341f9b4d65957da6062f8bab4183604 | C/C++ | 8,603 | 231 | //FastQTL: Fast and efficient QTL mapper for molecular phenotypes
//Copyright (C) 2015 Olivier DELANEAU, Alfonso BUIL, Emmanouil DERMITZAKIS & Olivier DELANEAU
//
//This program is free software: you can redistribute it and/or modify
//it under the terms of the GNU General Public License as published by
//the Free Soft... |
5d3f46223b356ff4fefbdae55f4f3844217a196e37e4cf08a6e20f74d10fc788 | C/C++ | 8,673 | 383 | /*******************************************************************************
Copyright 2006-2012 Lukas Käll <lukas.kall@scilifelab.se>
Licensed under the Apache License, Version 2.0 (the "License");
you may not use this file except in compliance with the License.
You may obtain a copy of the License at
http:... |
fb235a8f504bc57041f5f7b3c802f59210e21e75aaa66669d0bec56e18657157 | C/C++ | 8,676 | 401 | /* -*- mode: C++; indent-tabs-mode: nil; -*-
*
* This file is a part of LEMON, a generic C++ optimization library.
*
* Copyright (C) 2003-2013
* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
* (Egervary Research Group on Combinatorial Optimization, EGRES).
*
* Permission to use, modify and distribut... |
ecf9cf124243c1cc46939ab068a5763253aee893c975315fb008a724f6f87736 | C/C++ | 8,705 | 318 | //-----------------------------------------------
// Copyright 2010 Wellcome Trust Sanger Institute
// Written by Jared Simpson (js18@sanger.ac.uk)
// Released under the GPL
//-----------------------------------------------
//
// EncodedString - Templated class to store
// a string from a reduced alphabet. The actual
/... |
54e24ee1249f529c91f9ff2ba9b8f76707ba6108b752caa010a36e4409706b80 | C/C++ | 8,739 | 245 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2008-2011 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a copy of the MPL was not distributed
// with this file, You c... |
7f73bc470d32ff69b4e73c8e7198e67b297d12d8f160b68e88774d91253a60c8 | C/C++ | 8,827 | 325 | /*
# =============================================================================
# Copyright (c) 2016 - 2021 Blue Brain Project/EPFL
#
# See top-level LICENSE file for details.
# =============================================================================
*/
#pragma once
#include <initializer_list>
#include <type_... |
69a55bfeb1214cbe5cbe7a6e6c073033bd7ffaaa395a17246ef01396ffae2771 | C/C++ | 8,870 | 330 |
/********************
PhyloBayes MPI. Copyright 2010-2013 Nicolas Lartillot, Nicolas Rodrigue, Daniel Stubbs, Jacques Richer.
PhyloBayes is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
as published by the Free Software Foundation, either version 3 of the L... |
232d0234a696498d6427849b4a15cd6e0ba902f708cf0acfeaa7c56488f8ba98 | C/C++ | 9,000 | 351 | /*****************************************
*** adapted from crux/src/c/Protein.h ***
*****************************************/
/**
* \file Protein.h
* $Revision: 1.25 $
* \brief Object for representing one protein sequence.
*****************************************************************************/
#ifndef ... |
6706050034e36badf4d17938eca6a1b3ae214535cbcf0a13fd0e7f7e4892370e | C/C++ | 9,085 | 244 | /*******************************************************************************
Copyright 2006-2012 Lukas Käll <lukas.kall@scilifelab.se>
Licensed under the Apache License, Version 2.0 (the "License");
you may not use this file except in compliance with the License.
You may obtain a copy of the License at
http:... |
11649543b8adb3da4bc81a8f9162697d262e874366d052946baa19a7e2062eb3 | C/C++ | 9,098 | 267 | /*******************************************************************************
"A Collection of Useful C++ Classes for Digital Signal Processing"
By Vinnie Falco
Official project location:
https://github.com/vinniefalco/DSPFilters
See Documentation.cpp for contact information, notes, and bibliography.
----------... |
7162c847b052cdb5f86194f5cfa3dac650dffc827e15d1e1481351e208518033 | C/C++ | 9,230 | 132 | /*
* Copyright (c) 2013 The WebRTC project authors. All Rights Reserved.
*
* Use of this source code is governed by a BSD-style license
* that can be found in the LICENSE file in the root of the source
* tree. An additional intellectual property rights grant can be found
* in the file PATENTS. All contribut... |
55b2024eceb0d42fabecdc4b48021dd706e21f552d580a443355b7d608a3d2ae | C/C++ | 9,241 | 203 | #pragma once
// __________________________________________________________________//
// //
// File created from BrainAmpIoCtl.h in Brain Products low level SDK //
// More compliant with OpenViBE coding rules //
// _______________... |
aaffa0b3c7545789ed2a9a1c4abf9422d02b8e73f804cdd513479614bcc23021 | C/C++ | 9,243 | 213 | // dear imgui test engine
// (helpers/utilities. do NOT use this as a general purpose library)
// This file is governed by the "Dear ImGui Test Engine License".
// Details of the license are provided in the LICENSE.txt file in the same directory.
#pragma once
//-------------------------------------------------------... |
477ab49ac5383f2e7946b9082eea82f2c0bfaffe217508dbe7d594555f88cc10 | C/C++ | 9,312 | 255 | /**
* SPDX-FileCopyrightText: Inria <florent.leray@inria.fr>
* SPDX-License-Identifier: AGPL-3.0-only
*
* @file AbstractDriver.h
* @brief Header file for the AbstractDriver class.
*
* This file declares the `AbstractDriver` class, which serves as an abstract base
* class for hardware drivers. It defines a commo... |
4ad261deb09ef6b74141ca294b7538342b5932060556f74fe14d15bbe7fd2a09 | C/C++ | 9,318 | 312 | /* -*- mode: C++; indent-tabs-mode: nil; -*-
*
* This file is a part of LEMON, a generic C++ optimization library.
*
* Copyright (C) 2003-2013
* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
* (Egervary Research Group on Combinatorial Optimization, EGRES).
*
* Permission to use, modify and distribut... |
830ebbadb3426fb1022f0db863c2ef6b25dec16c9836119b35c28b3fff4abbd6 | C/C++ | 9,440 | 311 | #ifndef XFORM_H
#define XFORM_H
/*
* Szymon Rusinkiewicz
* Princeton University
* XForm.h
* Affine transforms (represented internally as column-major 4x4 matrices)
* Supports the following operations:
* xform xf1, xf2; // Initialized to the identity
* XForm<float> xf3; // xform is XForm<double>
* ... |
e1c02ba5376edb7bdde009ed746ed721150f0b735a854679fdfec3b22cd43da7 | C/C++ | 9,662 | 388 | /* -*- mode: C++; indent-tabs-mode: nil; -*-
*
* This file is a part of LEMON, a generic C++ optimization library.
*
* Copyright (C) 2003-2013
* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
* (Egervary Research Group on Combinatorial Optimization, EGRES).
*
* Permission to use, modify and distribut... |
3a153bb6fd4bed111186959abf858750e5711110f77c1d9e5a99272e7b5bd99f | C/C++ | 9,672 | 271 | /* The MIT License
Copyright (c) 2008 Genome Research Ltd (GRL).
Permission is hereby granted, free of charge, to any person obtaining
a copy of this software and associated documentation files (the
"Software"), to deal in the Software without restriction, including
without limitation the rights to use... |
8609eed987cf783ea325ab5d6cf667edd0fb582129ef2fb2e10511cbece13ec6 | C/C++ | 9,701 | 348 |
/********************
PhyloBayes MPI. Copyright 2010-2013 Nicolas Lartillot, Nicolas Rodrigue, Daniel Stubbs, Jacques Richer.
PhyloBayes is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
as published by the Free Software Foundation, either version 3 of the L... |
d7b913ebae75ac0b6711cebf3eed96c0e4ffc4f9222e0fb8b9054e677896add6 | C/C++ | 9,716 | 284 | //$ nobt
//$ nocpp
/**
* @file r8butil.h
*
* @brief The inclusion file with several utility functions.
*
* This file includes several utility functions used by various utility
* programs like "calcErrorTable.cpp".
*
* r8brain-free-src Copyright (c) 2013-2014 Aleksey Vaneev
* See the "License.txt" file for lic... |
1fbca37606bd3883cd8c2e615ac397766d3fd2f4fd4487292823d07f1257b249 | C/C++ | 9,906 | 323 | #pragma once
#include <socket/IConnection.h>
#include "defines.h"
#include "ovCMessagingProtocol.h"
namespace Communication {
/**
* \brief The purpose of this class is to provide a communication protocol to exchange EBML between a client and a server.
*/
class Communication_API CMessaging
{
public:
/**
*... |
ba4a9704ee1a877fc9a201c1ad143f7cb49aecd8910adaf1b09ce395bae7a4a5 | C/C++ | 9,918 | 317 | ///-------------------------------------------------------------------------------------------------
///
/// \file ovtkTGenericCodec.h
/// \copyright Copyright (C) 2022 Inria
///
/// This program is free software: you can redistribute it and/or modify
/// it under the terms of the GNU Affero General Public License as ... |
6285f10a651ff3feec385214ce9d1047945cca7be7e975ba00e6dbf6c417f938 | C/C++ | 10,087 | 239 | ///-------------------------------------------------------------------------------------------------
///
/// \file CDisplayCueImage.hpp
/// \brief Classes for the Box Display cue image.
/// \author Joan Fruitet, Jussi T. Lindgren (Inria Sophia, Inria Rennes).
/// \version 1.2.
/// \copyright Copyright (C) 2022 Inria
/... |
92ee53c9a62fba98b74ec9a2d6a53327e16f202dc899c4684866992af23764f7 | C/C++ | 10,106 | 277 | #pragma once
#include "ovasCAcquisitionServerGUI.h"
#include "ovasCAcquisitionServer.h"
#include <system/ovCTime.h>
#include <cmath> // std::abs() for Fedora
// fwd declare of gtk idle callbacks
static gboolean idle_updateimpedance_cb(void* data);
static gboolean idle_updatedrift_cb(void* data);
static gboolean idle... |
79e17b7da72ef1e73a66623d5fa59d3bab1cc2ac4fd6b012b660f3e694165b30 | C/C++ | 10,217 | 240 | /**
* SPDX-FileCopyrightText: Inria <tristan.cabel@inria.fr>
* SPDX-License-Identifier: AGPL-3.0-only
*/
#pragma once
#include <functional>
#include <openvibe/ov_all.h>
#include <QtCore>
#include <QtQml>
#include "BoxObject.h"
#include "CommentObject.h"
#include "LinkObject.h"
#include "ScenarioParameterConnectio... |
a13439901053dd586fc8c7e0c404e143d18b0b97b2f16e5427df65b960de7521 | C/C++ | 10,234 | 355 | /******************************************
*** adapted from crux/src/c/Database.h ***
******************************************/
/**
* \file Database.h
* $Revision: 1.27 $
* \brief Object for representing a database of protein sequences.
************************************************************************... |
50e42bc42162f3235eb91e4495089302dba5d0504530e081ae1e6b0a05db5589 | C/C++ | 10,270 | 289 | /*
# =============================================================================
# Copyright (c) 2016 - 2021 Blue Brain Project/EPFL
#
# See top-level LICENSE file for details.
# =============================================================================
*/
/*
To be included by a file that desires rendezvous rank ... |
fc55f6a658a05f7a28c007ff64e018fdf5cd56b9a00318e7170e82596d33f5d7 | C/C++ | 10,303 | 379 |
/********************
PhyloBayes MPI. Copyright 2010-2013 Nicolas Lartillot, Nicolas Rodrigue, Daniel Stubbs, Jacques Richer.
PhyloBayes is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
as published by the Free Software Foundation, either version 3 of the L... |
7a8deca5df4ba52870fd5ff8a297792ce2dea7a988113a20fc08fb26f1242c31 | C/C++ | 10,304 | 243 | // dear imgui test engine
// (internal api)
// This file is governed by the "Dear ImGui Test Engine License".
// Details of the license are provided in the LICENSE.txt file in the same directory.
#pragma once
#include "imgui_te_coroutine.h"
#include "imgui_te_utils.h" // ImMovingAverage
#include "imgui_captu... |
3470ba5c48d2fa43df3ab16c1d674e213b1093d42a24ebb073212e4848d06c94 | C/C++ | 10,360 | 386 |
/********************
PhyloBayes MPI. Copyright 2010-2013 Nicolas Lartillot, Nicolas Rodrigue, Daniel Stubbs, Jacques Richer.
PhyloBayes is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
as published by the Free Software Foundation, either version 3 of the L... |
979e584a8a7604e531d5da1b4f7a19cd502e16a06d3d4f599c3e962ea58ff2cd | C/C++ | 10,361 | 374 | #ifndef TRIMESH_H
#define TRIMESH_H
/*
Szymon Rusinkiewicz
Princeton University
TriMesh.h
Class for triangle meshes.
*/
#ifndef LARGENUM
#define LARGENUM 10000000.0
#endif
#ifndef ONE
#define ONE 1
#endif
#ifndef CURVATURE
#define CURVATURE 2
#endif
#ifndef NOISE
#define NOISE 3
#endif
#ifndef MANUAL_SP... |
0035d8248263e4f0f2e18da0249d5e52225821642ebbd5409a50249eebb4266a | C/C++ | 10,384 | 368 |
/********************
PhyloBayes MPI. Copyright 2010-2013 Nicolas Lartillot, Nicolas Rodrigue, Daniel Stubbs, Jacques Richer.
PhyloBayes is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
as published by the Free Software Foundation, either version 3 of the L... |
d573cb8035eb3dcb8bff420d163bdd09b26b35ef6c42691701a4db857eeecb56 | C/C++ | 10,412 | 387 | /* nrnconf.h. Generated from nrnconf.h.in by configure. */
/* config.h.in. Generated from configure.ac by autoheader. */
#ifndef H_nrnconf_included
#define H_nrnconf_included 1
/* Define if building universal (internal helper macro) */
/* #undef AC_APPLE_UNIVERSAL_BUILD */
/* Define to one of `_getb67', `GETB6... |
ca9d7f644b2fddf89ad962d15ac758cde164459ea5fb4b36560ee9e074372acd | C/C++ | 10,416 | 387 | /* nmodlconf.h. Generated from nmodlconf.h.in by configure. */
/* config.h.in. Generated from configure.ac by autoheader. */
#ifndef H_nrnconf_included
#define H_nrnconf_included 1
/* Define if building universal (internal helper macro) */
/* #undef AC_APPLE_UNIVERSAL_BUILD */
/* Define to one of `_getb67', `G... |
52451e49afa225be3619d8aa8cc189690f4052bd6d2e665588cc0a26ca2f6c2b | C/C++ | 10,430 | 347 | /* -*- mode: C++; indent-tabs-mode: nil; -*-
*
* This file is a part of LEMON, a generic C++ optimization library.
*
* Copyright (C) 2003-2013
* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
* (Egervary Research Group on Combinatorial Optimization, EGRES).
*
* Permission to use, modify and distribut... |
0cb69e6072b3690338026807f18b2953685d884cdda3a7467e632f32045cfc00 | C/C++ | 10,433 | 381 | #pragma once
/**
* @file ovCtrlCmdMsg.h
* @author Florent LERAY
* @date 2025
* @version 1.0
* @copyright Copyright (c) 2025 INRIA. All rights reserved.
* @license This project is released under LGPLv3 license.
* @brief Header file defining the ovCtrlCmdMsg structure for control commands sent to Acquisition Server.
* @... |
903c5f31bec56c3a098fb0d04de46d046ad1849f7899d498bdc9416eebc54f35 | C/C++ | 10,489 | 397 |
/********************
PhyloBayes MPI. Copyright 2010-2013 Nicolas Lartillot, Nicolas Rodrigue, Daniel Stubbs, Jacques Richer.
PhyloBayes is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
as published by the Free Software Foundation, either version 3 of the L... |
bb59aecb4dade28ef4e207fad110c61cb040cc761c2b26cbaccce609693b1a4d | C/C++ | 10,493 | 351 | /* -*- mode: C++; indent-tabs-mode: nil; -*-
*
* This file is a part of LEMON, a generic C++ optimization library.
*
* Copyright (C) 2003-2013
* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
* (Egervary Research Group on Combinatorial Optimization, EGRES).
*
* Permission to use, modify and distribut... |
82a27a70ec0ada0af3c79152466af5f465e7775dbc84dce5e800be9b86ad47bf | C/C++ | 10,505 | 324 | /* -*- mode: C++; indent-tabs-mode: nil; -*-
*
* This file is a part of LEMON, a generic C++ optimization library.
*
* Copyright (C) 2003-2013
* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
* (Egervary Research Group on Combinatorial Optimization, EGRES).
*
* Permission to use, modify and distribut... |
a2b5ff7830f64a4545ee0a570d18829c49e182be195513f965f54e64b252e1be | C/C++ | 10,540 | 357 | //-----------------------------------------------
// Copyright 2009 Wellcome Trust Sanger Institute
// Written by Jared Simpson (js18@sanger.ac.uk)
// Released under the GPL license
//-----------------------------------------------
//
// mkqs - multikey quicksort
//
// Perform a ternary quicksort of strings as describe... |
7c47e019de427336f0c95d6dc075036eeadbd924abcf3eb91ae76297ab55b4c8 | C/C++ | 10,599 | 260 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2012 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a copy of the MPL was not distributed
// with this file, You can ob... |
43727cad9dbde3182f8b42bc333b91163f02e0f6ca42ae830000ec0b4f60c293 | C/C++ | 10,608 | 455 | #ifndef VEC_H
#define VEC_H
/*
Szymon Rusinkiewicz
Princeton University
Vec.h
Class for a constant-length vector
Supports the following operations:
vec v1; // Initialized to (0,0,0)
vec v2(1,2,3); // Initializes the 3 components
vec v3(v2); // Copy constructor
float farray[3];
vec v4 = vec(farray); // Explic... |
d9bedac7c89642e99bace46febe528549206ef934a0d1376a39fe2cc237c23c0 | C/C++ | 10,635 | 320 | /*******************************************************************************
"A Collection of Useful C++ Classes for Digital Signal Processing"
By Vinnie Falco
Official project location:
https://github.com/vinniefalco/DSPFilters
See Documentation.cpp for contact information, notes, and bibliography.
----------... |
986fcf7de7ead19d82bad9bcd7d145c4ed56d10163984abed0ec6ab39b9d5a6e | C/C++ | 10,687 | 324 | /* -*- mode: C++; indent-tabs-mode: nil; -*-
*
* This file is a part of LEMON, a generic C++ optimization library.
*
* Copyright (C) 2003-2013
* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
* (Egervary Research Group on Combinatorial Optimization, EGRES).
*
* Permission to use, modify and distribut... |
c4059ae42f130f6176fcbcdf2d24878d96ccf96d439fe9488a9cf16df2fd38a9 | C/C++ | 10,707 | 180 | #pragma once
#include "../ovkTKernelObject.h"
#include "openvibe/parameters/parameters.h"
#include "ovkTBox.hpp"
#include <vector>
#include <map>
#include <memory>
namespace OpenViBE {
namespace Kernel {
typedef TBox<IBox> CBox;
class CComment;
class CMetadata;
class CLink;
class CScenario final : public TBox<ISce... |
86853972a5df3420815865bc2461202e969e0a8bfd044e074ae800b2de71ff00 | C/C++ | 10,749 | 281 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2008-2009 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a copy of the MPL was not distributed
// with this file, You c... |
4c85397ecbfe0503e2b896c6d04af76ea1c45506a446700a74538bb9c04b1cc5 | C/C++ | 10,774 | 415 |
/********************
PhyloBayes MPI. Copyright 2010-2013 Nicolas Lartillot, Nicolas Rodrigue, Daniel Stubbs, Jacques Richer.
PhyloBayes is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
as published by the Free Software Foundation, either version 3 of the L... |
7a6cf53822f840df5ac0a5852f7a6ea9a6d291be0f4626d8468060f0b448f520 | C/C++ | 10,780 | 367 | /* -*- mode: C++; indent-tabs-mode: nil; -*-
*
* This file is a part of LEMON, a generic C++ optimization library.
*
* Copyright (C) 2003-2013
* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
* (Egervary Research Group on Combinatorial Optimization, EGRES).
*
* Permission to use, modify and distribut... |
c69231c3ee71b54fffe94c2ffe0be240f9dcf37dc33d777b42b50bce2085c9b2 | C/C++ | 10,936 | 314 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2012 Desire Nuentsa <desire.nuentsa_wakam@inria.fr>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a copy of the MPL was not distributed
// with this file, You ca... |
c193dbcb713d237adadb6f7527ebb587f2f7f44f41ec21ed53e4cb60bcf99038 | C/C++ | 10,979 | 314 | /*******************************************************************************
"A Collection of Useful C++ Classes for Digital Signal Processing"
By Vinnie Falco
Official project location:
https://github.com/vinniefalco/DSPFilters
See Documentation.cpp for contact information, notes, and bibliography.
----------... |
4a66fcd9bc9c8fdd968851c07e9cb83ff31d6484ddb48e06277f576ad00ccabb | C/C++ | 10,999 | 383 |
/********************
PhyloBayes MPI. Copyright 2010-2013 Nicolas Lartillot, Nicolas Rodrigue, Daniel Stubbs, Jacques Richer.
PhyloBayes is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
as published by the Free Software Foundation, either version 3 of the L... |
e5d73e1990034278eaa544b31d116d260984e5f4f2e0488fccf5a7afd2b8f61d | C/C++ | 11,011 | 343 | /* -*- mode: C++; indent-tabs-mode: nil; -*-
*
* This file is a part of LEMON, a generic C++ optimization library.
*
* Copyright (C) 2003-2009
* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
* (Egervary Research Group on Combinatorial Optimization, EGRES).
*
* Permission to use, modify and distribut... |
d48e9f6723fbf37d7c207e0edd4ed40553a69f084261e11ca97c65f04eb3c163 | C/C++ | 11,029 | 293 | //===------------------------- MicrosoftDemangle.h --------------*- C++ -*-===//
//
// Part of the LLVM Project, under the Apache License v2.0 with LLVM Exceptions.
// See https://llvm.org/LICENSE.txt for license information.
// SPDX-License-Identifier: Apache-2.0 WITH LLVM-exception
//
//===---------------------------... |
27b163d1e5b245cd0b5b172ac69887729501c887d0e95260168ae19d6dab7e92 | C/C++ | 11,058 | 345 | /*
This file provides a dumb c++ wrapper for sending OSC packets over UDP.
*/
/* Copyright (C) 2010 Julien Pommier
This software is provided 'as-is', without any express or implied
warranty. In no event will the authors be held liable for any damages
arising from the use of this software.
Permission is g... |
d7fa1ab14de544c61f24e4e02833caace2abe4706ecf171f531851d3d10e97ae | C/C++ | 11,089 | 346 | #pragma once
#include <openvibe/ov_all.h>
#include <cmath>
#include <fstream>
#include <vector>
namespace OpenViBE {
namespace Plugins {
namespace FileIO {
#define NO_VALUE_I 0xffffffff
#define NO_VALUE_S "_unspecified_"
/**
* Useful classes for GDF file format handling
*/
class GDF
{
public:
class CFixedGDFH... |
026047a9889ee623798186a234f18ce5ce7f16fde131ef57968efdb5f09c0e3b | C/C++ | 11,094 | 326 | #include <cmath>
#include <cstring>
#include <stdexcept>
// Gotran generated C/C++ code for the panthom bursting model Bertram R and Sherman A. "A calcium-based phantom bursting model for pancreatic islets". Bulletin of Mathematical Biology. 2004; 66:1313–1344.
// Init state values
void init_state_values(double* state... |
489214b926e496c3e938d9ed89e6a88be825cc28dcf7b110e616344f036481bc | C/C++ | 11,174 | 486 | #ifndef VEC_H
#define VEC_H
/*
Szymon Rusinkiewicz
Princeton University
Vec.h
Class for a constant-length vector
Supports the following operations:
vec v1; // Initialized to (0,0,0)
vec v2(1,2,3); // Initializes the 3 components
vec v3(v2); // Copy constructor
float farray[3];
vec v4 = vec(farray); // Explic... |
18a6737aea90b01e6aa52e7428c84f799c5630da5ed01fa87d739308d61a63c9 | C/C++ | 11,221 | 352 | /* -*- mode: C++; indent-tabs-mode: nil; -*-
*
* This file is a part of LEMON, a generic C++ optimization library.
*
* Copyright (C) 2003-2009
* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
* (Egervary Research Group on Combinatorial Optimization, EGRES).
*
* Permission to use, modify and distribut... |
2826d9a9bff249e76744b7a161b30f61c2db5f32eb19dda8957799405ebde5a8 | C/C++ | 11,241 | 386 | //-----------------------------------------------
// Copyright 2010 Wellcome Trust Sanger Institute
// Written by Jared Simpson (js18@sanger.ac.uk)
// Released under the GPL
//-----------------------------------------------
//
// SparseGapArray
//
// The sparse gap array uses a small integer type to
// keep the count f... |
437e7f2d7001891a01a0695b635d566e657bb58a20c6d40643c244ecac48e23d | C/C++ | 11,314 | 334 | /*!
* Copyright (c) 2016-2026 Microsoft Corporation. All rights reserved.
* Copyright (c) 2016-2026 The LightGBM developers. All rights reserved.
* Licensed under the MIT License. See LICENSE file in the project root for license information.
*/
#ifndef LIGHTGBM_INCLUDE_LIGHTGBM_BOOSTING_H_
#define LIGHTGBM_INCLUDE_... |
da674e02e9a037ca65889b87e5cfe8b919395362bc70a209e163d83f6a79f160 | C/C++ | 11,320 | 320 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2008-2010 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a copy of the MPL was not distributed
// with this file, You c... |
293705f19d46c73a1f57e7221b5bb0465d1e556328281413348f137b952496f8 | C/C++ | 11,370 | 393 |
/********************
PhyloBayes MPI. Copyright 2010-2013 Nicolas Lartillot, Nicolas Rodrigue, Daniel Stubbs, Jacques Richer.
PhyloBayes is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
as published by the Free Software Foundation, either version 3 of the L... |
325598caea17acba8117d8b3fb25fdf8f83fa8a85474ebcf9ee1a3fe132547cd | C/C++ | 11,382 | 333 | #pragma once
#include "ovas_base.h"
namespace OpenViBE {
namespace AcquisitionServer {
/**
* \class IHeader
* \author Yann Renard (INRIA/IRISA)
* \date 2007-04-01
* \brief Base class for an OpenViBE header container
*
* IHeader objects are used by IDriver objects to give all the header
* information to the acq... |
1d8bc5e75fe749cccb9a9c88ee72927d1187f4b9163f93780262a02ae755f96e | C/C++ | 11,493 | 301 | //-----------------------------------------------
// Copyright 2009 Wellcome Trust Sanger Institute
// Written by Jared Simpson (js18@sanger.ac.uk)
// Released under the GPL
//-----------------------------------------------
//
// RLBWT - Run-length encoded Burrows Wheeler transform
//
#ifndef RLBWT_H
#define RLBWT_H
... |
ba42d0bd1c21496ee4df8db9181d6ed94f35b50814a41b4fd9ba86eb623c6d5b | C/C++ | 11,543 | 316 | /*******************************************************************************
"A Collection of Useful C++ Classes for Digital Signal Processing"
By Vinnie Falco
Official project location:
https://github.com/vinniefalco/DSPFilters
See Documentation.cpp for contact information, notes, and bibliography.
----------... |
0e37e458a92df04ee9123b5e79a8f6d908b1354048646fbd5c797e55b8af83eb | C/C++ | 11,588 | 317 | /*******************************************************************************
"A Collection of Useful C++ Classes for Digital Signal Processing"
By Vinnie Falco
Official project location:
https://github.com/vinniefalco/DSPFilters
See Documentation.cpp for contact information, notes, and bibliography.
----------... |
3c8d80022ee90fedbc1214a3b7593be9af46e506edb5daec4907f7b9d9cca783 | C/C++ | 11,650 | 308 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2009 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a copy of the MPL was not distributed
// with this file, You can ob... |
c85d0f7037259d865481ff355ae8c0aeaa8e87186adc1cfacf79969019c59c76 | C/C++ | 11,656 | 317 | /****
DIAMOND protein sequence aligner
Copyright (C) 2012-2026 Benjamin J. Buchfink
This program is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later vers... |
cbde59f73e962445784f1e31cab3bd6f30fd5927c377826f248324440b8ca692 | C/C++ | 11,838 | 350 | /*******************************************************************************
"A Collection of Useful C++ Classes for Digital Signal Processing"
By Vinnie Falco
Official project location:
https://github.com/vinniefalco/DSPFilters
See Documentation.cpp for contact information, notes, and bibliography.
----------... |
0fbb6ebde750c93bf86bc5a9eecae8eb34992829f5ebe108cd504f1c25be1971 | C/C++ | 11,924 | 180 | //-----------------------------------------------------------------------------
// COMPILE-TIME OPTIONS FOR DEAR IMGUI
// Runtime options (clipboard callbacks, enabling various features, etc.) can generally be set via the ImGuiIO structure.
// You can use ImGui::SetAllocatorFunctions() before calling ImGui::CreateConte... |
b9de38bb5e87ba47155ccf96857c780337531007deb3f11dc0d36712ffb6f1a2 | C/C++ | 11,963 | 183 | // dear imgui test engine
// (screen/video capture tool)
// This is usable as a standalone applet or controlled by the test engine.
// This file is governed by the "Dear ImGui Test Engine License".
// Details of the license are provided in the LICENSE.txt file in the same directory.
#pragma once
// Need "imgui_te_en... |
0d14e26c330c7a544eb86bae684ee8d0e4f8d7bebe739f50af2c714c0e01d843 | C/C++ | 11,974 | 266 | #pragma once
// vcf.h
//
// Read a svaba `bps.txt.gz` file back in, dedupe the breakpoint pairs,
// and write out somatic/germline SV and indel VCFs.
//
// Design notes:
// * `BreakPoint` is non-copyable and non-movable (see BreakPoint.h), so we
// store every breakpoint as a `std::shared_ptr<BreakPoint>` — both the... |
6cf987733fe67b33a9f1cb244a66f1c1a97059062a86d84e7e4d74b83bcaac2b | C/C++ | 12,034 | 325 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a copy of the MPL was not distributed
// with this file, You can ob... |
ec6a11235e6a77b7789188b233269eacfbd8402df1ce55bf392e51b7bd5664f0 | C/C++ | 12,084 | 102 | #pragma once
#define OVTK_Algorithm_ScenarioExporter_NodeId_OpenViBEScenario OpenViBE::CIdentifier(0x1CD93114, 0x6A544E8C)
#define OVTK_Algorithm_ScenarioExporter_NodeId_FormatVersion OpenViBE::CIdentifier(0xB7818440, 0x928C3366)
#define OVTK_Algorithm_ScenarioExport... |
88865963653f97e9781014e8dc6c8fe6c774fc311c57ea64fce0cd3aa583c9d3 | C/C++ | 12,175 | 321 | #pragma once
#include "ovas_base.h"
namespace OpenViBE {
namespace AcquisitionServer {
/**
* \class IHeader
* \author Yann Renard (INRIA/IRISA)
* \date 2007-04-01
* \brief Base class for an OpenViBE header container
*
* IHeader objects are used by IDriver objects to give all the header
* information to the acq... |
6b2a926d91d534d0263b24d480c325b681f344e11a467d2ee8640d592b759c50 | C/C++ | 12,243 | 132 | #pragma once
// @BEGIN inserm-gpl
// Boxes
//---------------------------------------------------------------------------------------------------
#define OVP_ClassId_SpectralAnalysis OpenViBE::CIdentifier(0x1491AFA8, 0xF81E49D5)
#define OVP_ClassId_SpectralAnalysisDesc ... |
a5e89a83743f026532236291ad8037d83750b04147872c361f7f95142d51f018 | C/C++ | 12,278 | 253 | #pragma once
#include "../ovIKernelObject.h"
namespace OpenViBE {
namespace Kernel {
class IConfigurationKeywordExpandCallback;
/**
* \class IConfigurationManager
* \author Yann Renard (INRIA/IRISA)
* \date 2008-11-05
* \brief Manager for all kind of configuration
* \ingroup Group_Config
* \ingroup Group_Kerne... |
7719372c309dbd00d343054d23a8304198588cdbb6bf9ebbeb8f762d76a662df | C/C++ | 12,382 | 480 | /* config.h. Generated from config.h.in by configure. */
/* config.h.in. Generated from configure.ac by autoheader. */
#ifndef H_nrnconf_included
#define H_nrnconf_included 1
/* Define if building universal (internal helper macro) */
/* #undef AC_APPLE_UNIVERSAL_BUILD */
/* (Remove from nrnconf.h.in) */
/* #un... |
60a7a27a203a72706e6e2124e44370e007f5cfb3ef971580dcfee006dc599a96 | C/C++ | 12,750 | 488 | /****
DIAMOND protein sequence aligner
Copyright (C) 2012-2026 Benjamin J. Buchfink
This program is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later vers... |
df130374789223d8e1a1c32975560b3a496e485eadf2a130690ca6d12d65b4dd | C/C++ | 12,918 | 501 | #pragma once
#include "imnodes.h"
#include <imgui.h>
#define IMGUI_DEFINE_MATH_OPERATORS
#include <imgui_internal.h>
#include <limits.h>
// the structure of this file:
//
// [SECTION] internal enums
// [SECTION] internal data structures
// [SECTION] global and editor context structs
// [SECTION] object pool impleme... |
7650cf952ae8a6c18c12fcaf19317436f89bb8fb3500ecc5fd9becc6427e3d7b | C/C++ | 12,990 | 282 | ///-------------------------------------------------------------------------------------------------
///
/// \file CGrazMultiVisualization.hpp
/// \brief Classes for the Generalized Graz Visualization box.
/// \author Thibaut Monseigne (Inria).
/// \version 1.0.
/// \date 28/05/2019.
/// \copyright Copyright (C) 2022 ... |
60b1746e7004c382575b4ca22a0436a188a4a25519ecbe122a6d3ccc78e166f1 | C/C++ | 13,022 | 523 |
/********************
PhyloBayes MPI. Copyright 2010-2013 Nicolas Lartillot, Nicolas Rodrigue, Daniel Stubbs, Jacques Richer.
PhyloBayes is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
as published by the Free Software Foundation, either version 3 of the L... |
4aa3daf0b83511bd475f3d1296feb3ad7123d9ce518048cba556be6e7eb37221 | C/C++ | 13,049 | 459 | /* -*- mode: C++; indent-tabs-mode: nil; -*-
*
* This file is a part of LEMON, a generic C++ optimization library.
*
* Copyright (C) 2003-2009
* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
* (Egervary Research Group on Combinatorial Optimization, EGRES).
*
* Permission to use, modify and distribut... |
7352aad495ec5a19b897440b78d9426d4cf0da445b71cb9326e981614248716c | C/C++ | 13,222 | 438 | /* -*- mode: C++; indent-tabs-mode: nil; -*-
*
* This file is a part of LEMON, a generic C++ optimization library.
*
* Copyright (C) 2003-2009
* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
* (Egervary Research Group on Combinatorial Optimization, EGRES).
*
* Permission to use, modify and distribut... |
905538659c939fb1dbb02fd44f13c00cc952070029d440ae36ec9907b437a3ea | C/C++ | 13,225 | 445 | /* -*- mode: C++; indent-tabs-mode: nil; -*-
*
* This file is a part of LEMON, a generic C++ optimization library.
*
* Copyright (C) 2003-2010
* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
* (Egervary Research Group on Combinatorial Optimization, EGRES).
*
* Permission to use, modify and distribut... |
178768a9e546972fb89de28ecb3ec5060e5734865da9469c3f7f9fb997d583e4 | C/C++ | 13,301 | 421 | /* -*- mode: C++; indent-tabs-mode: nil; -*-
*
* This file is a part of LEMON, a generic C++ optimization library.
*
* Copyright (C) 2003-2013
* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
* (Egervary Research Group on Combinatorial Optimization, EGRES).
*
* Permission to use, modify and distribut... |
3f1e8f3d7d88a8bb69c914aae56066b3f3b67b03492579a89444f800cd900ebd | C/C++ | 13,639 | 440 | /* -*- mode: C++; indent-tabs-mode: nil; -*-
*
* This file is a part of LEMON, a generic C++ optimization library.
*
* Copyright (C) 2003-2010
* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
* (Egervary Research Group on Combinatorial Optimization, EGRES).
*
* Permission to use, modify and distribut... |
18a15906741e5e7f73c827dd483a5dea7dbee4d2a7ac040f83e60b319d5591e5 | C/C++ | 13,685 | 298 | #pragma once
#include "ovIKernelObject.h"
#include <vector>
namespace OpenViBE {
namespace Kernel {
/**
* \class ITypeManager
* \brief Type manager, provides information on platform's handled types, parameters, streams etc...
* \author Yann Renard (INRIA/IRISA)
* \date 2007-03-14
*
* This manager concentrates a... |
36d5c5138ba2e99b70e671a8426398309ee320054960c5b3c8019757784267ff | C/C++ | 13,830 | 475 | /* -*- mode: C++; indent-tabs-mode: nil; -*-
*
* This file is a part of LEMON, a generic C++ optimization library.
*
* Copyright (C) 2003-2009
* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
* (Egervary Research Group on Combinatorial Optimization, EGRES).
*
* Permission to use, modify and distribut... |
99c11cb8d5c96bf0fa838cf26d6ed59dc23056cf10e80f422682a25fbb812bc5 | C/C++ | 13,859 | 478 | /*****************************************
*** adapted from crux/src/c/Peptide.h ***
*****************************************/
/**
* \file peptide.h
* $Revision: 1.52 $
* \brief Object for representing one peptide.
*/
#ifndef CRUX_PEPTIDE_H
#define CRUX_PEPTIDE_H
#include <cmath>
#include <stdio.h>
#includ... |
53c0999115ea8a60e68abcd875e2d56c8010b89f74eb55fa5155e1b801df3c75 | C/C++ | 13,948 | 439 | ///-------------------------------------------------------------------------------------------------
///
/// \file ovICSV.h
/// \copyright Copyright (C) 2022 Inria
///
/// This program is free software: you can redistribute it and/or modify
/// it under the terms of the GNU Affero General Public License as published
/... |
1fd199c6d4165888d8f1b085079542b1c51af80120dc9627fea4371454d78977 | C/C++ | 13,997 | 474 | /* -*- mode: C++; indent-tabs-mode: nil; -*-
*
* This file is a part of LEMON, a generic C++ optimization library.
*
* Copyright (C) 2003-2009
* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
* (Egervary Research Group on Combinatorial Optimization, EGRES).
*
* Permission to use, modify and distribut... |
8a2827aa094942bbb6ef92dc55c515e233cef18efa8114286fded99d58ae6440 | C/C++ | 13,998 | 343 | ///-------------------------------------------------------------------------------------------------
///
/// \file ovAssert.h
/// \copyright Copyright (C) 2022 Inria
///
/// This program is free software: you can redistribute it and/or modify
/// it under the terms of the GNU Affero General Public License as published... |
eeb6b3d8a2f195ec683967662dc13485f5f349693ecc2c1155e32a572f665ebc | C/C++ | 14,025 | 627 | /* -*- mode: C++; indent-tabs-mode: nil; -*-
*
* This file is a part of LEMON, a generic C++ optimization library.
*
* Copyright (C) 2003-2013
* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
* (Egervary Research Group on Combinatorial Optimization, EGRES).
*
* Permission to use, modify and distribut... |
80df7a0a675d5c0ebea56b570c064c3fdcbd7fd7956c973655fb3d83d9b2fc76 | C/C++ | 14,129 | 494 | /* -*- mode: C++; indent-tabs-mode: nil; -*-
*
* This file is a part of LEMON, a generic C++ optimization library.
*
* Copyright (C) 2003-2009
* Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport
* (Egervary Research Group on Combinatorial Optimization, EGRES).
*
* Permission to use, modify and distribut... |
445d6fa75f3cfaac12aad073402ccedf3fd23e3f08f673e9f3355d3db8b4da82 | C/C++ | 14,511 | 565 |
/********************
PhyloBayes MPI. Copyright 2010-2013 Nicolas Lartillot, Nicolas Rodrigue, Daniel Stubbs, Jacques Richer.
PhyloBayes is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
as published by the Free Software Foundation, either version 3 of the L... |
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