sha256 stringlengths 64 64 | language stringclasses 28
values | size int32 1 491k | lines int32 1 23.2k | content stringlengths 1 200k |
|---|---|---|---|---|
79ecb36b0742f69b075d4eb5d2f53e6aab561d28b2f78a21f59c36f72c04e594 | MATLAB | 562 | 29 | function zef = zef_delete_compartment(zef,compartments_selected)
if nargin < 2
compartments_selected = [];
end
if nargin == 0
zef = evalin('base','zef');
end
table_data = zef.h_compartment_table.Data;
if isempty(compartments_selected)
compartments_selected = zef.compartments_selected;
end
for i = 1 : leng... |
ca245ca4150d104b0da00b39f4f5d953afa9d3834ca0c2761d9fc32f384f5b6f | MATLAB | 562 | 22 | function zef_logarithmic_distribution(parameter_vec)
%Logarithmic distribution
axes(evalin('base','zef.h_axes1'));
h_axes = evalin('base','zef.h_axes1');
cla(h_axes,'reset');
parameter_vec = max(1E-30,parameter_vec);
h_hist = histogram(log10(parameter_vec),200);
hist_y = log10(h_hist.Values);
hist_x = 0.5*(h_hist.Bi... |
012342a1b4207a20c6014470966b27e13b9ee874df7f726de89ca508408f68e2 | MATLAB | 563 | 13 | function [best_model, best_model_index] = select_best_model(model_collection, params)
best_model_index = get_best_model(model_collection);
best_model = SingleModel(model_collection, best_model_index);
best_model.best_model_index = best_model_index;
%Convert to Structures for saving
warning('off','all');
model_col... |
1c4229501c1f7566be7b8b89f35e4a84fddd5a061c000491ccc991f63a026f4a | MATLAB | 564 | 12 | function [y_vals, plot_mode] = zef_corr_max_scaling_max_weighting(time_series)
%Copyright © 2018- Sampsa Pursiainen & ZI Development Team
%See: https://github.com/sampsapursiainen/zeffiro_interface
%This function processes the N-by-M data array f for N channels and M time
%steps. The other arguments can be controlled v... |
9eeb95a1e0ea11ca224cd7c030728da8719c6cc73d8c228758ac318b97943a9d | MATLAB | 564 | 17 | function browse_data(app)
q = figure('Renderer', 'painters', 'Position', [-100 -100 0 0]); %create a dummy figure so that uigetfile doesn't minimize our GUI
% see
% https://www.mathworks.com/matlabcentral/answers/296305-appdesigner-window-ends-up-in-background-after-uigetfile
% Onur Ozdemir solution
% Hacky but whate... |
d216b3b805f8dbcc37dbf56011516cad645147a88c4e80341c828b17a1be63ad | MATLAB | 564 | 20 | %resize the time dimension of an image stack
function [resize, resizeT] = resizeZ( stack, time, df )
% x-y-nframes stack
% f number of frames to average,
% output will be x by y by nframes/f
height = size( stack, 1);
width = size( stack, 2);
nframes = size( stack, 3);
newframes = floor(nframes/df);
resize = zeros( hei... |
056afd9b333330ad829f659bd44bb5bbfee4fb13926d67e93b14daab3aa45467 | MATLAB | 565 | 32 | function [y,p_avg,p_std]=multinomrnd(p,m,n)
%Performs random sampling from a binomial distribution
%
% [y]=multinomrnd(p,m,n)
% where p=1-by-k vector of probabilities of occurrence
% n=sample size
% and m= number of trials
% y=samples-matrix of size k-by-m
%
% for picking out one of k mixture components,... |
3e0277ff9adb5e5244261eedf1abd7ecc3005923408b5d26cc73e3f233dbd9e0 | MATLAB | 565 | 24 | function [order,exptimelag] = higherorder(minHz,Fs,L,orderoffset)
% tells the order and exponential time lag for covering up to the slowest
% frequency, using L lags
% This can be done exactly, but...
order = ceil(Fs / minHz); exptimelag = 1.01;
if nargin<4, orderoffset = 0; end
if nargin>=3
while 1
orders = ... |
9590c50fe6ce5d5bad9fd10583033aff2535e807ef4e7c7d3610d34119698d05 | MATLAB | 566 | 24 | function data = rawsignal2power(data,T)
% Gets *square of* the power time series using the Hilbert transform,
% as done in Baker et al (2014), eLife.
%
% Diego Vidaurre, OHBA, University of Oxford (2017)
if isstruct(data), ndim = size(data.X,2);
else, ndim = size(data,2);
end
for n = 1:length(T)
ind = sum(T(1:n-1... |
aafa0ff159a8ad5215f1883ba172926abb3f64b1d9ebd653f5faf5a899747598 | MATLAB | 568 | 23 | function [model_idx,model_sets] = index_models(model_sets_input, model_vector)
% returns models such that each column is a unique value of
% model_sets_input and each row is a unique combination of parameters
% containing said value
%how many parameters are there
model_sets = length(unique(model_sets_input));
%from ... |
5d5a75f6374f1aaa80eec9609f94dcd831acfa462e961f740ee045617a05f473 | MATLAB | 569 | 18 | % OV_MATLAB toolkit
% OV_setFeatureVectorInputHeader.m
% -------------------------------
% Author : Laurent Bonnet (INRIA)
% Date : 28/07/2011
% Set the header information on a Feature Vector input.
function box_out = OV_setFeatureVectorInputHeader(box_in, input_index, nb_features, labels)
box_in.inputs{in... |
2325c2707c031560002c1a5dd752e3bb5736e2df0b83593b3b7bfbf64857b3b4 | MATLAB | 570 | 14 | function [L, measurements] = zef_lead_field_normalize_maximum_data(lf_bank_index)
%Copyright © 2018- Sampsa Pursiainen & ZI Development Team
%See: https://github.com/sampsapursiainen/zeffiro_interface
%This function normalizes the lead field data for a given lead
%field bank entry.
%Description: Maximum data entry norm... |
31a20646f7a0d04c1a268f1d9ab8f0dc23e5b9c5c2898e6768f600eac6fbd406 | MATLAB | 571 | 22 | function [proj] = MeanMaxSTD( stackin, type )
% stackin is a single stack
% type is mean, max, or std
switch type
case 'mean'
proj = mean( stackin, 3 );
case 'max'
proj = max( stackin, [], 3 );
case 'std'
stackin = single(stackin);
proj = std( stackin, 0, 3 );
case 'all'... |
4d1d3775609d0712c2fde2399a0a34a284e66a8b08c4cc0351b69ac3b16b89c4 | MATLAB | 571 | 13 | function [y_vals, plot_mode] = zef_corr_mean_scaling(time_series)
%Copyright © 2018- Sampsa Pursiainen & ZI Development Team
%See: https://github.com/sampsapursiainen/zeffiro_interface
%This function processes the N-by-M data array f for N channels and M time
%steps. The other arguments can be controlled via the ZI use... |
01de41c4027dc1859e855643570854b9e6591d126dcb9da10b0e6f6aa2bbca73 | MATLAB | 572 | 31 | %% 1)
N = 10;
wb = parwaitbar(N);
parfor i=1:N
pause(0.1);
wb.progress();
end
%% 2)
N = 100;
wb = parwaitbar(N,'BarLength',10);
for i=1:N
pause(rand);
wb.progress();
end
%% 3)
N = 100;
wb = parwaitbar(N,'WaitMessage','Hang on...','FinalMessage','Done!');
parfor i=1:N
pause(rand);
wb.progress()... |
6be0da15b5767a383e9f403b7f8891a1fb104f1942d6cc6c8a8887a24b5fc0c2 | MATLAB | 572 | 19 | function [cf, bw, hf] = calc_cf_and_bw(t_vec, pulse_vec,varargin)
if isempty(varargin)
signal_threshold = -20;
elseif length(varargin)>0
signal_threshold = -abs(varargin{1});
end
f_vec = 1:ceil((length(pulse_vec)-1)/2);
s_fft = fft(real(pulse_vec));
db_vec = db(abs(s_fft(2:1+ceil((length(pulse_vec)-1)/2))));
... |
bc2397e7f55d71b54359c0d52375bfc67e503325a24482dd2426d836e587406b | MATLAB | 572 | 13 | function [y_vals, plot_mode] = zef_corr_max_scaling(time_series)
%Copyright © 2018- Sampsa Pursiainen & ZI Development Team
%See: https://github.com/sampsapursiainen/zeffiro_interface
%This function processes the N-by-M data array f for N channels and M time
%steps. The other arguments can be controlled via the ZI user... |
d46dee707064a131a3478da35b04e442f40177eba94f8e89c444b7257afc2170 | MATLAB | 573 | 12 | function [processed_data] = zef_zero_reference(f)
%Copyright © 2018- Sampsa Pursiainen & ZI Development Team
%See: https://github.com/sampsapursiainen/zeffiro_interface
%This function processes the N-by-M data array f for N channels and M time
%steps. The other arguments can be controlled via the ZI user interface.
%Th... |
dc15e0a7460d7e2301b8a5934d734f8b40de38696da51736e233c096dfbfe510 | MATLAB | 573 | 27 | % THIS FUNCTION IS PRIVATE AND SHOULD NOT BE CALLED BY OUTSIDE CODE!
%
function [res] = DoGetResultsCmd( s, cmd )
ChkConn( s );
ok = CalinsNetMex( 'sendString', s.handle, sprintf( '%s\n', cmd ) );
res = cell( 0 );
while( 1 )
line = CalinsNetMex( 'readLine', s.handle );
if( strcmp( ... |
4f3bf070b6f003c95ff48ab0572f81990c9de9567610497ef15e16895e6312e3 | MATLAB | 574 | 19 | function generate_model_structure(app)
app.model_structure = axes('Parent', app.BigDecodingPlot, 'Units', 'pixels',...
'OuterPosition', [21 19 860 670], 'InnerPosition', [60.4000 54.4000 812.1000 615.3000],...
'Box', 'on');
set_common_plot_settings(app.model_structure);
se... |
c1ca4fb628974f40e1ea8a6b9d29a8ab8fa4142b4015d4f8623558c08a06f53e | MATLAB | 574 | 22 | function obj = calculate_gfp(obj) ;
% Calculate GFP of time series
if isempty(obj.modality)
return
end
switch obj.modality
case 'eeg'
gfp = std(obj.data,[],2) ;
method = 'std' ;
case {'meg','source','ampenv'}
gfp = vecnorm(obj.data,2,2)... |
cfbfee9c5795d90d4c22cba10472f485984871f80c57800fe3f83907dd5b38ec | MATLAB | 576 | 14 | function [faces, faces_count] = zef_validate_faces(tetra)
faces = [[sort(tetra(:,[2 4 3]),2) ones(size(tetra,1),1) [1:size(tetra,1)]'];
[sort(tetra(:,[1 3 4]),2) 2*ones(size(tetra,1),1) [1:size(tetra,1)]'];
[sort(tetra(:,[1 4 2]),2) 3*ones(size(tetra,1),1) [1:size(tetra,1)]'];
[sort(tetra(:,[1 2 3]),2) 4... |
18c16dfd22b191edbbd762b4d7cce0b952e2fc83d8d08f26358ca629667fef7e | MATLAB | 578 | 19 | function [P_store,z_inverse] = kalman_filter(m,P,A,Q,L,R, timeSteps ,number_of_frames, smoothing)
P_store = cell(0);
z_inverse = cell(0);
h = zef_waitbar(0,1, 'Filtering');
for f_ind = 1: number_of_frames
zef_waitbar(f_ind,number_of_frames,h,...
['Filtering ' int2str(f_ind) ' of ' int2str(number_of_frames) ... |
f2e57d6fe570540a17e4b98c8d65265c5c05b7c408e3f0ce829ddb516e0a61e5 | MATLAB | 578 | 17 | for zef_i = 1 : size(zef.init_profile,1)
if not(isstring(zef.init_profile{zef_i,2}))
zef.init_profile{zef_i,2} = num2str(zef.init_profile{zef_i,2});
end
if isequal(zef.init_profile{zef_i,4},'string')
eval(['zef.' zef.init_profile{zef_i,3} '= ''' zef.init_profile{zef_i,2} ''';']);
else... |
4ca39e9226715b4a75ea60b70be1f7ab56c0178b8e804d8fac77fabca305f069 | MATLAB | 579 | 13 | function [y_vals, plot_mode] = zef_std_no_scaling(time_series)
%Copyright © 2018- Sampsa Pursiainen & ZI Development Team
%See: https://github.com/sampsapursiainen/zeffiro_interface
%This function processes the N-by-M data array f for N channels and M time
%steps. The other arguments can be controlled via the ZI user i... |
d6e460ea57210b4e570683d924542fb7213e33ca26618755210977c000610f85 | MATLAB | 579 | 18 | % OV_MATLAB toolkit
% OV_setFeatureVectorInputHeader.m
% -------------------------------
% Author : Laurent Bonnet (INRIA)
% Date : 28/07/2011
% Set the header information on a Feature Vector input.
function box_out = OV_setFeatureVectorOutputHeader(box_in, output_index, nb_features, labels)
box_in.outputs... |
951326c34821a579a4ab00d43d51f3cce6850c0e86e4d73b442e3539fc0b26c3 | MATLAB | 581 | 18 | function s = getSynchronicity(Gamma,T)
% Returns a time resolved measure of synchronicity, computed as the
% maximum fractional occupancy across trials, i.e. for each time point
% the across-trial average loading of the state that is more dominant
% at this time point
%
% Author: Diego Vidaurre, OHBA, University ... |
3d6f4d20f5598ad8013ffc5323b7264a168a6e64f605e673daebde9e885d1346 | MATLAB | 582 | 10 | if isequal(zef.lock_sensor_sets_on,0)
zef.h_sensors_table.ColumnEditable = logical(ones(1,size(zef.h_sensors_table.Data,2)));
zef.h_menu_lock_sensor_sets_on.Text = 'Toggle ''On'' unlocked';
zef.h_menu_lock_sensor_sets_on.ForegroundColor = [0 0 0];
elseif isequal(zef.lock_sensor_sets_on,1)
zef.h_sensors_... |
8727f5737ae10b033325ddd581ea06cd8fe6be5f053cda390022a57e090a1ed5 | MATLAB | 582 | 24 | function [vecFreq,vecPower] = getPowerSpectrum(varData,dblSampFreq,intDim)
%% check inputs
if ~exist('intDim','var') || isempty(intDim)
intDim = 1;
end
%% calculate power spectrum
dblT = 1/dblSampFreq; % Sampling period
intL = size(varData,intDim); % Length of signal
vecTime = (0:i... |
5647b75f17126152dc11f8b518804991a49c98aacee9b5cf0cac496ab13d4c9a | MATLAB | 584 | 20 | % OV_MATLAB toolkit
% OV_hasPendingInputChunk.m
% -------------------------------
% Author : Laurent Bonnet (INRIA)
% Date : 13 Jan. 2012
% Tests if there is pending Input chunk in the buffer
% -------------------------------
% MEANT TO BE USED IN USER SCRIPT
function nb_pending = OV_getNbPendingInputChunk(box_in, ... |
a469d307d6cef6665cc6df31836f669463e87b1dca95d103f31594fb777de1a3 | MATLAB | 587 | 24 | function gaussVector = singleGaussian(xVector,params)
%singleGaussian builds a Gaussian with inputs: (xVector,params)
%params is a vector: [mu sigma peak baseline]
%mu, sigma, peak, baseline
mu=params(1);
sigma=params(2);
peak=params(3);
baseline=params(4);
%uses matlab's built-in normpdf() function
gauss ... |
27a48c19aee48e57c1d7c02c3ce9bb454a4bc4781f4b68aa24a166cad482990e | MATLAB | 588 | 26 | if not(isfield(zef,'inv_hyperprior_tail_length_db'));
zef.inv_hyperprior_tail_length_db = 10;
end;
if not(isfield(zef,'inv_prior_over_measurement_db'));
zef.inv_prior_over_measurement_db = 0;
end;
if not(isfield(zef,'inv_snr'));
zef.inv_snr = 30;
end;
if not(isfield(zef,'inv_hyperprior'));
zef.inv_hyp... |
3efcd70d906e47b15d97db47e26152c79878296da309af0350fe484f116ee7af | MATLAB | 588 | 14 | %Copyright © 2018- Sampsa Pursiainen & ZI Development Team
%See: https://github.com/sampsapursiainen/zeffiro_interface
if not(isempty(zef.save_file_path)) & not(zef.save_file_path==0)
[zef.file zef.file_path] = uigetfile('*.mat','Merge lead field with...',zef.save_file_path);
else
[zef.file zef.file_path] = uig... |
f88a224b81838b6b673c95a8e2815f7311d0d1cb560fc964b2cc01946fc3a80b | MATLAB | 588 | 24 | function C = map_centroids(X,modality)
switch modality
case 'eeg'
X = X-mean(X) ; % re-reference to average
centfun = @(v1) v1 ;
case 'meg'
% do nothing
centfun = @(v1) v1 ;
case 'source'
X = abs(X) ;
centfun = @(v1) abs(v1) ;
case 'ampenv'
% ... |
0ef42d565bebe8cf7e1c8a72662b31fcb0201fa5990f35feecf199a989361dfa | MATLAB | 589 | 16 | %Copyright © 2018- Joonas Lahtinen, Sampsa Pursiainen & ZI Development Team
%See: https://github.com/sampsapursiainen/zeffiro_interface
%Update script for possibly hidden advanced plot options for GMM app.
zef_ind = find(strcmp(zef.GMM.parameters.Tags,'dip_num'));
if isempty(zef.GMM.parameters.Values{zef_ind})
ze... |
44c39a22b57e7ad38829bacfa6cc43f8c64171e5273029a371825ae47fc019ca | MATLAB | 590 | 13 | function binned = times2counts(st, factor)
%TIMES2COUNTS Bin spike times to counts with linear interpolation
% BINNED = TIMES2COUNTS(ST,FACTOR) will sum up spike-time timestamps ST
% into bins of length 1.0/FACTOR samples, distributing the point mass of
% each spike across two adjacent bins via linear interpola... |
d54356584e59e34fe9f70a2d63f2649120f4ccf22154a9111cd2fc5d691b768f | MATLAB | 590 | 13 | load(['..',filesep,'data',filesep,'DWIBEHAV']);
load(['..',filesep,'data',filesep,'DWIBEHAV_RAW']);
for row=2:size(CRcell,1)
if CRcell{row,9}==1
% p <.05 *sig
X=CORR_RAW.(CRcell{row,1}).(CRcell{row,2}).(CRcell{row,3}).(CRcell{row,4}).(CRcell{row,5}).DWI;
Y=CORR_RAW.(CRcell{row,1}).(CRc... |
d1f9b020fa5c34d9059ebe7c2272480daf6fec45f25a6b6a2dc07c8836da5876 | MATLAB | 592 | 21 | function ET_startRecording()
%ET_startRecording Function to run at recording start
%get globals
global sET;
global sEyeFig;
%set recording text
set(sEyeFig.ptrTextRecording,'String','Recording','ForegroundColor',[0 0.8 0]);
%lock gui
ET_lock(sEyeFig);
set(sEyeFig.ptrToggleConnectSGL,'Enable','off');
sET.b... |
2e80ec7df82c8a2d1edbcc4085884fa27c5b42b3349517e5644682aa130311e0 | MATLAB | 593 | 25 | function kappa = zef_update_zoom(varargin)
if isequal(evalin('caller','exist(''zef'')'),1)
zef = evalin('caller','zef');
else
zef = evalin('base','zef');
end
if not(isempty(varargin))
h_figure = varargin{1};
else
h_figure = eval('zef.h_zeffiro');
end
h = findobj(get(h_figure,'Children'),'Tag','axes1'... |
6a2221a4fe8eda4e904e7f005b5adfd3920a619dedbacafc7af882c46a48b057 | MATLAB | 594 | 24 | function s = getAccuracy(X,Y,T,Gamma,options,do_preproc)
% Returns a time resolved (cross-validated) measure of accuracy
%
% Author: Diego Vidaurre, OHBA, University of Oxford (2018)
if nargin<6, do_preproc = 1; end
if nargin<5, options = struct(); end
if ~all(T(1)==T)
error('Synchronisity can only be measured if ... |
721fcc804cb3777901960fa5aabb019119aa85bc2a41daa2b59383e4aa241e49 | MATLAB | 594 | 18 | function [Ytest,d,C] = fgmdm(COVtest,COVtrain,Ytrain,varargin)
if isempty(varargin)
method_mean = 'riemann';
method_dist = 'riemann';
else
method_mean = varargin{1};
method_dist = varargin{2};
end
labels = unique(Ytrain);
Nclass = length(labels);
% geodesic ... |
a6043a41c6f808c4229e5e497a247ecb5cb8a37d6d43db1c3afb81b0f7d324e8 | MATLAB | 594 | 32 | function zef = zef_add_compartment(zef)
if nargin == 0
zef = evalin('base','zef');
end
zef.aux_field_1 = zef.h_compartment_table.Data;
zef = zef_create_compartment(zef,zef_compartment_tag(zef));
zef_i = size(zef.aux_field_1,1) + 1;
zef_j = 1;
zef_init_fields_compartment_table;
zef = zef_apply_parameter_profile(... |
d631b6bc806d5647905afe40176cc83ba554fce390023c6feb425a16aa7c1005 | MATLAB | 594 | 18 | function y = logisticfitx0(beta,x)
%logisticfit0 Logistic growth centered at (x=0,y=0)
% Syntax: y = logisticfit0(beta,x)
% beta(1) = L (asymptote) [default 1]
% beta(2) = k (slope) [default 1]
% beta(3) = x0 (x-offset) [default 0]
% beta(4) = y0 (y-offset) [default 0]
%define parameters
if length(beta) < 1... |
14f33e317ae877829736dfa650c3cc7b4707f92bb13d96ccfc6ac86a2716dc83 | MATLAB | 597 | 14 | function [L, measurements] = zef_lead_field_normalize_frobenius(lf_bank_index)
%Copyright © 2018- Sampsa Pursiainen & ZI Development Team
%See: https://github.com/sampsapursiainen/zeffiro_interface
%This function normalizes the lead field data for a given lead
%field bank entry.
%Description: Frobenius norm normalizati... |
4162a5131cb0061991470ef552a2d895a7edb26c4cf5047c814a432f946b40d3 | MATLAB | 597 | 19 | function generate_model_evaluation(app)
app.model_evaluation = axes('Parent', app.ViewDecodingPerfPanel, 'Units', 'pixels',...
'OuterPosition', [9 10 423 236], 'InnerPosition', [32.4000 45.4000 375.1000 181.3000],...
'Box', 'on');
set_common_plot_settings(app.mo... |
b272b78904ebda897d39448ebdebf101ac766f6107db07ea6078106a4375e511 | MATLAB | 597 | 20 | % OV_MATLAB toolkit
% OV_hasPendingOutputChunk.m
% -------------------------------
% Author : Laurent Bonnet (INRIA)
% Date : 13 Jan. 2012
% Tests if there is pending output chunk in the buffer
% -------------------------------
% MEANT TO BE USED IN USER SCRIPT
function nb_pending = OV_getNbPendingOutputChunk(box_i... |
fa4e8d6d241041ed7e5024ddb5b65c9b04e82b71f951229ef79a293b57dd78c9 | MATLAB | 598 | 22 | function [hMain,hTop,hRight]=multiGraph(varargin)
%multiGraph Makes 3 axes in a single graph
% Syntax: [hMain,hTop,hRight]=multiGraph([left offset] [,bottom offset] [,size of small graphs])
% params must contain four values:
%lO1: left offset
%bO1: bottom offset
%sGZ: size of small graphs
figure
[lO1,bO1,sGZ] ... |
31898782c47d507695a653ce4dcc2c51431561d3083cd2b2b751475619921860 | MATLAB | 600 | 10 | if isequal(zef.lock_sensor_names_on,0)
zef.h_sensors_name_table.ColumnEditable = logical(ones(1,size(zef.h_sensors_name_table.Data,2)));
zef.h_menu_lock_sensor_names_on.Text = 'Toggle unlocked';
zef.h_menu_lock_sensor_names_on.ForegroundColor = [0 0 0];
elseif isequal(zef.lock_sensor_names_on,1)
zef.h_s... |
dc603bafb9243ce7fc1b77a672d1ba55d58bf02cd246b1f20e626085772dcc2f | MATLAB | 600 | 16 | function zef_update_contour(zef)
if eval('zef.show_contour')
h_fig = gcf;
h_axes = findobj(h_fig.Children,'Tag','axes1');
h_contour_old = findobj(h_axes.Children,'Tag','contour');
delete(h_contour_old);
h_contour_text_old = findobj(h_axes.Children,'Tag','contour_text');
delete(h_contour_text_ol... |
36fdfa41d487990c81f8f7965c7bb74d563487f51dbe359a24cec203707c4b52 | MATLAB | 601 | 9 | %Copyright © 2018- Sampsa Pursiainen & ZI Development Team
%See: https://github.com/sampsapursiainen/zeffiro_interface
zef.bf_sampling_frequency = str2num(get(zef.h_bf_sampling_frequency,'string'));
zef.bf_low_cut_frequency = str2num(get(zef.h_bf_low_cut_frequency,'string'));
zef.bf_high_cut_frequency = str2num(get(zef... |
698c1de8166e6d3395859b66fd61cf57643509a293df1ff1d3f16fbece0e7b48 | MATLAB | 601 | 17 | % t50 rise alignment
function [ t50rise, t50riseIndex ] = t50rise( x, y )
% y data, assumes data have been:
% baseline zeroed and there's a single peak
% t50rise is the interpolated time of 50% rise
% t50riseIndex is the index of the last point below 50% rise
amplitude = max(y);
crossings = FindLevel( x, y, 0.5*ampl... |
269fafa10aff24097581287d839516a532cb49f2d12c40399cb6fefdcc5ff513 | MATLAB | 602 | 23 | function tr = multitrace(A)
% Computes the traces of the 2D slices in a 3D matrix.
%
% function tr = multitrace(A)
%
% For a 3-dimensional matrix A of size n-by-n-by-N, returns a column vector
% tr of length N such that tr(k) = trace(A(:, :, k));
%
% See also: multiprod multitransp multiscale
% This file is part of M... |
7ee314966a68dd4482a467adac56694fd401b047eb161c2c15c1e27f06748ac8 | MATLAB | 606 | 33 | function [xarray , Ndata] = vb_cell_merge(xcell)
% merge cell array into vector
% [xarray , Ndata] = vb_cell_merge(xcell)
% --- Input
% xcell : cell array
% ---Output
% xarray : concatenated data vector
% Ndata(n) : number of data in xcell{n}
%
% M. Sato 2006-7-21
%
% Copyright (C) 2011, ATR All Rights Reserved.
% Lic... |
09734eedb9d68ec4941277bb8519b7f22e963e62bdf5d3f9d37a9beecdbf2c53 | MATLAB | 608 | 20 | function hmm = clearTPM(hmm)
% Removes the information about the state transition probabilities (hmm.P)
% and the initial probabilities (hmm.Pi).
% This is useful if the model is to be applied to a different data set
% where the underlying system may be different
%
% Author: Diego Vidaurre (2020) University of Oxford
... |
0a65523f576a16902f53ba41d36ad098a2e5146ff0a6ce1f22762c80bce4fb5a | MATLAB | 611 | 26 | function contrast_val = zef_update_contrast(varargin)
slider_value_new = evalin('base','zef.h_update_contrast.Value');
if not(isempty(varargin))
h = varargin{1};
else
h = evalin('base','zef.h_axes1');
end
if not(isempty(varargin))
if length(varargin) > 1
slider_value_new = varargin{2};
end
en... |
6bec7f0f2ebff687eaa4ee394d6612f20121a9d6b1359efcc024273def7bc02a | MATLAB | 611 | 24 | function [y_vals, plot_mode] = zef_parcellation_boxplot_amplitude(time_series)
% Description: Amplitude boxplot
plot_mode = 4; % custom mode for boxplot rendering
if ~iscell(time_series)
error('Time series must be a cell array for boxplot mode.');
end
[num_rois, num_frames] = size(time_series);
y_vals = cell(num... |
ce5888b3a321a94d67950f8d66521ab033af8691b3b3945bac3c407e566420a9 | MATLAB | 611 | 29 | function zef = zef_dataBank_FunctionsDropDown(zef)
if nargin == 0
zef = evalin('base','zef');
end
zef.dataBank.app.combinePanel.Visible='Off';
zef.dataBank.app.importPanel.Visible='Off';
zef.dataBank.app.mag2gragPanel.Visible='Off';
switch zef.dataBank.app.FunctionsDropDown.Value
case 'combine Lf'
z... |
e0c456886b3a437d231e35360b941f738e779eb93bddd40d74d37d75d4072623 | MATLAB | 614 | 30 | function [tree, hash] = zef_dataBank_add(tree, parentHash, data)
%getData (before!)
%make new node
%identify parent
%add to parent
%update gui other function
node=[];
node.data=data;
node.type=data.type;
node.name=data.type;
if strcmp(data.type, 'reconstruction') && isfield(node.data, 'reconstruction_information'... |
0ab5174ae4ce5497f574cdf1da886c040c96e6627fc05cc95a9ec5f5b0701999 | MATLAB | 616 | 15 | function generate_rms_degree_structural_learning(app)
app.rms_degree_structural_learning = axes('Parent', app.DegreesSL, 'Units', 'pixels',...
'OuterPosition', [566,9,171,210], 'InnerPosition', [586.7333 44.4 126.6 139.3],...
'Box', 'on');
set_common_plot_settings(app.rms_degree_structu... |
1c292795444ba4b8007d69b6e01e577d5919ed2d5960f50692770a6397fbe8f6 | MATLAB | 616 | 19 | % openvibe toolbox for Matlab
% OV_addInputBuffer.m
% -------------------------------
% Author : Laurent Bonnet (INRIA)
% Date : 13 Jan. 2012
% Appends a new signal chunk to a signal input buffer in a matlab box instance.
% -------------------------------
% MEANT TO BE USED BY OPENVIBE
function box_out = OV_addInpu... |
53e3747444f8e720b53df80450ffec61905b01961aad0a3e3e45ba57df2e999d | MATLAB | 616 | 27 | function brightness_val = zef_update_brightness(varargin)
slider_value_new = evalin('base','zef.h_update_brightness.Value');
if not(isempty(varargin))
h = varargin{1};
else
h = evalin('base','zef.h_axes1');
end
if not(isempty(varargin))
if length(varargin) > 1
slider_value_new = varargin{1};
... |
778e06790035966d51c584f00ae979d3f7a61dd1120c12f1e7bd07d02c574845 | MATLAB | 616 | 21 | function dblCorr = getCorrAtAngle(dblAngle,vecX,vecY,vecV)
%getCorrAtAngle Correlation of vecV with location of X/Y projected unto a line with angle dblAngle
% dblCorr = getCorrAtAngle(dblAngle,vecX,vecY,vecV)
%center x/y
vecX=zscore(vecX(:));
vecY=zscore(vecY(:));
matXY=[vecX vecY]';
%rotate reference vecto... |
8d3680003b7196fe763c73958f4484d6985cf7c9171d99e957fc525387faf349 | MATLAB | 616 | 30 | function zef_make_package(program_path,package_name)
if nargin == 1
package_name = 'zeffiro';
end
fprintf(['Adding the following list of files into +' package_name ' package:\n'],'%s')
package_path = [program_path filesep '+' package_name];
if exist(package_path)
rmdir(package_path,'s');
end
mkdir(package_pa... |
3a44a87df587f1cf9ebfffa9197a6e1fbcf8dce659d7d9ac9cc4130147d1eda7 | MATLAB | 617 | 14 | function [L, measurements] = zef_lead_field_normalize_mean_data(lf_bank_index)
%Copyright © 2018- Sampsa Pursiainen & ZI Development Team
%See: https://github.com/sampsapursiainen/zeffiro_interface
%This function normalizes the lead field data for a given lead
%field bank entry.
%Description: Mean data norm normalizati... |
6e7d1cad5663b32c7ffe80e16c80bceb2c64f8cb643582ff0f95143b6de0db7b | MATLAB | 617 | 15 | function generate_complexity_structural_learning(app)
app.complexity_structural_learning = axes('Parent', app.DegreesSL, 'Units', 'pixels',...
'OuterPosition', [751,9,171,210], 'InnerPosition', [771.7333 44.4 126.6 139.3],...
'Box', 'on');
set_common_plot_settings(app.complexity_structu... |
cd590b692fdffe1b4e8b0f8a70d781378804e64e2b7ee10bf934d7d0eeabef65 | MATLAB | 617 | 17 | %Copyright © 2021- Sampsa Pursiainen & GPU-ToRRe-3D Development Team
%See: https://github.com/sampsapursiainen/GPU-Torre-3D
function [boundary_vec_1, boundary_vec_2] = boundary_point_source(source_points, orbit_triangles, orbit_nodes)
n_triangles = size(orbit_triangles(:,1), 1);
n_nodes = size(orbit_nodes(:,1), 1);
... |
946248d5a51aba0126b15fad9a705c649c3983acda1a15289d114d89640289fe | MATLAB | 619 | 28 | function zef = zef_dataBank_exportButtonPress(zef)
if nargin == 0
zef = evalin('base','zef');
end
zef_dataBank_getHashForMenu;
[savefile,savepath] = uiputfile('*','Select a file');
if strcmp(zef.dataBank.app.typeDropDown.Value, 'Node')
data=zef.dataBank.tree.(zef.dataBank.hash);
if isobject(data.data)
... |
823e93c513ed64440fe67c2eebf90c5644cd20ee5e576108756dfd99285512a4 | MATLAB | 621 | 13 | function bsling_plotrawdata(X_clear_sham,clear_sham_raw_mean,clear_sham_raw_se,Y_clear_sham,COL)
figure;
plot(X_clear_sham,Y_clear_sham,'Color',COL,'LineWidth',2);
hold on
% errorbar(1:5,clear_sham_raw_mean,clear_sham_raw_se,'o','Color',COL,'MarkerFaceColor',COL,'LineWidth',1.5);
xlim([1 5])
set(gca,'XTick',1:5,... |
cd133346d487b7a8560f47cb9b418abf281268f32c23ae3335fc3c2b73c43a61 | MATLAB | 621 | 24 | function labels = loadMNISTLabels(filename)
%loadMNISTLabels returns a [number of MNIST images]x1 matrix containing
%the labels for the MNIST images
fp = fopen(filename, 'rb');
assert(fp ~= -1, ['Could not open ', filename, '']);
magic = fread(fp, 1, 'int32', 0, 'ieee-be');
assert(magic == 2049, ['Bad magic number in... |
f0f13fd37e1860a4def31b52726d1dba9ae5e054aa56be291f8db51f65fc63fc | MATLAB | 621 | 7 | function [roi_ind_1, roi_ind_2, roi_ind_3] = zef_nse_roi_ind(zef,nse_field)
roi_ind_1 = find(sqrt(sum((zef.source_positions - repmat([nse_field.roi_x nse_field.roi_y nse_field.roi_z],size(zef.source_positions,1),1)).^2,2))<= nse_field.roi_radius);
roi_ind_2 = setdiff(roi_ind_1, find(sqrt(sum((zef.source_positions - re... |
096e423bbdf6063f7ac3bdef8f2fc8c73b9a60bf7f5af083e332c5a04c91af9a | MATLAB | 622 | 22 | function imageEnhanced = imenhance(image)
%imHQ Transform image to contrast-enhanced version
% imageEnhanced = imHQ(image)
image = im2double(image);
imageEnhanced = zeros(size(image));
for intCh=1:size(image,3)
imThis = image(:,:,intCh);
imThis(isnan(imThis)) = nanmean(imThis(:));
imMin = min(imThis(:));
... |
bf788ee705a7653d8c48c55f543ba01f646a2df0ae1899c23fb3b94604913759 | MATLAB | 622 | 25 | % Calculates the mean of the 50 rec of the project file
z_inverse_results = cell(0);
data_tree = zef.dataBank.tree;
rec_ind = 1;
fn = fieldnames(data_tree);
for k=1:numel(fn)
node = data_tree.(fn{k});
if (strcmp(node.type, 'reconstruction'))
rec = node.data.reconstruction;
number_of_frames = le... |
e3b6a6f52cb1990f74cd297701bc8b86e29ddd2d598d9d28f541189138e79676 | MATLAB | 622 | 15 | function generate_mean_degree_structural_learning(app)
app.mean_degree_structural_learning = axes('Parent', app.DegreesSL, 'Units', 'pixels',...
'OuterPosition', [206 9 171 210], 'InnerPosition',...
[225.4 44.4 126.6 139.3], 'Box', 'on');
set_common_plot_settings(app.mean_degree_structu... |
030ab2755cc9a26a30d6abdba6020763e8687c3676fb450758fef4db94f9dea1 | MATLAB | 623 | 28 | function vecY = getCumGauss(varargin)
%UNTITLED Summary of this function goes here
% Detailed explanation goes here
if nargin == 2
vecParams = varargin{1};
vecX = varargin{2};
elseif nargin > 2 && nargin < 5
vecParams(1:2) = varargin{1};
vecX = varargin{2};
vecParams = [vecParams varargin{3}];
end
i... |
ce3e937d89bbacdb8e21ddceee766a4ff9072969fc410de1085eae3680c5a110 | MATLAB | 623 | 19 | function dblPosInt = getLiberalness(vecData)
%getLiberalness Summary of this function goes here
% dblPosInt = getLiberalness(vecData)
if ~isvector(vecData) || length(vecData) < 3
error('not a vector');
end
%sort
vecData = sort(vecData(:));
intN = numel(vecData);
vecNorm = linspace(1/intN,1,intN); %theor... |
8673ea01a1070e4be050a31a60819d599326e696d9139430b531461f2b335ebe | MATLAB | 624 | 15 | %Copyright © 2018- Sampsa Pursiainen & ZI Development Team
%See: https://github.com/sampsapursiainen/zeffiro_interface
if not(isempty(zef.save_file_path)) & not(zef.save_file_path==0)
[zef.file zef.file_path zef.file_type] = uigetfile({'*.mat','*.dat'},'Import',zef.save_file_path);
else
[zef.file zef.file_path ... |
74757768850a76e0c5c1cdeee4d362b295eab1f766711c407c08c3b88f617723 | MATLAB | 625 | 18 | function [nodes, triangles] = zef_create_sphere(radius, centre_point, n_faces)
warning off;
[x, y, z] = sphere(ceil(sqrt(8*n_faces)));
tr = delaunayTriangulation([x(:) y(:) z(:)]);
fe = freeBoundary(tr);
p = reducepatch(patch('Faces',fe,'Vertices',tr.Points),4*n_faces);
p = reducepatch(patch('Faces',p.faces,'Vertices'... |
28b6f78945869bc2814cb5aac0bd8462025b5f413bb90a3cda8667eead9dccfd | MATLAB | 626 | 20 | % openvibe toolbox for Matlab
% OV_addOutputBuffer.m
% -------------------------------
% Author : Laurent Bonnet (INRIA)
% Date : 13 Jan. 2012
% Appends a new chunk in an output buffer,
% meant to be popped by the openvibe box.
% -------------------------------
% MEANT TO BE USED IN USER SCRIPT
function box_out = ... |
7469517547d12cf02ad641c196885a349ab41fd39acd4256cb4c69fbfe065be6 | MATLAB | 626 | 18 | function len_MAT = fun_cal_len_LRC(MAT,thr)
ind_conn = find(abs(MAT)>thr);
len_MAT = zeros(size(MAT,1),size(MAT,2));
for ii = 1:length(ind_conn)
input_pos = floor((ind_conn(ii)-1)/size(MAT,1))+1;
input_xpos = floor((input_pos-1)/sqrt(size(MAT,2)))+1;
input_ypos = mod(input_pos-1,sqrt(size(MAT,2)))... |
3459422e9bcd7d27b1afa50cfde4432d263db53f0951a2b66cef671a43ea4935 | MATLAB | 627 | 24 | function [tree] = zef_dataBank_delete(tree, parentHash, save2disk)
hashNames=fieldnames(tree);
for i=1:length(hashNames)
if startsWith(hashNames{i}, strcat(parentHash, '_')) || strcmp(hashNames{i}, parentHash) %only children should be deleted. node_11 should not be deleted by node_1
if isobject(tree.(has... |
d128d574833d0d9d0db2771b7f2ac9dffd40c2d9c1effdfa0981e8579f286133 | MATLAB | 627 | 26 | function zef_set_compartment_color
color_vec = uisetcolor;
item_ind = evalin('base','zef.h_compartment_visible_color.Value');
compartment_tags = evalin('base','zef.compartment_tags');
if not(isequal(color_vec,0))
zef_j = 0;
for zef_i = length(compartment_tags) : -1 : 1
if evalin('base',['zef.' compartment_tags{z... |
0df0bc59c6544e4d8a1772904b6ba537aa1f60c49cedcd640b36ebfe7e32ef26 | MATLAB | 628 | 18 | function len_MAT = fun_cal_len_input(MAT,thr)
ind_conn = find(abs(MAT)>thr);
len_MAT = zeros(size(MAT,1),size(MAT,2));
for ii = 1:length(ind_conn)
input_pos = floor((ind_conn(ii)-1)/size(MAT,1))+1;
input_xpos = floor((input_pos-1)/sqrt(size(MAT,1)))+1;
input_ypos = mod(input_pos-1,sqrt(size(MAT,1)... |
10f155d4f2bae53b9d34e74e313826f64403748ab836e7138c4ea67a9733deac | MATLAB | 628 | 24 | function zef = zef_tes_lead_field(zef)
if nargin == 0
zef = evalin('base','zef');
end
warning('off');
zef.lead_field_type = 5;
zef.imaging_method = 1;
zef_delete_original_field;
zef = zef_process_meshes(zef);
zef.sensors_attached_volume = zef_attach_sensors_volume(zef,zef.sensors);
zef = zef_lead_field_matrix(zef... |
4b27ebe3135f8a14fddc96b0e779bf921339a07583870e1cd0646876471287ab | MATLAB | 628 | 11 | function [m, P] = class_kf_predict(KFclassObj)
% kf_predict is the prediction step of kalman filter
% Skip multiplications if A is Indentity
if (isdiag(KFclassObj.state_transition_model_A) && all(diag(KFclassObj.state_transition_model_A) - 1) < eps)
P = KFclassObj.prev_step_posterior_cov + KFclassObj.e... |
5eb1375c350b26f5e47fa06fe23390afa5f1e4f562641a88495850cac1eb00a6 | MATLAB | 628 | 11 | function optimize_button_pushed(app)
app_handles = struct();
app_handles.plot_axis = app.optimization_plot;
app_handles.all_struct_handle = app.TotalPassedStructuresEditField;
app_handles.all_model_learned_handle = app.TotalLearnedModelsEditField;
app_handles.s_handle = app.SelectedLambdasTextArea;
... |
ccfe059fc1958cf5d3e7d952cbcabbc0f8aa82bcb52b1ab77b9d7280e0b8ede2 | MATLAB | 628 | 15 | function plot_parameter_space_structural_learning(app)
newcolors = app.newcolors;
slambda_seq = app.params.s_lambda_sequence_glm;
num_slambda = [1:app.params.s_lambda_count];
app.parameter_space_structural_learning.ColorOrder = newcolors;
app.parameter_space_structural_learning.NextPlot = 'replacechildren';
area(a... |
11084e917a1a91a67cae466e52fd6803bd484de6c17a1ac7817c95136afd2ca6 | MATLAB | 629 | 21 | function DDATA=bsliang_selectINDdata(DATA,rej_ind,mode)
% ¸öÌå²ãÃæɾÊý¾Ý
if isequal(mode,'rej')
for ind=rej_ind
DATA(ind).par_info=[];
DATA(ind).def_range=[];
DATA(ind).practice=[];
DATA(ind).Id_Di=[];
end
elseif isequal(mode,'select')
... |
38d44a25a1cdbfa2002dd2ebe4f762bdf1b4ba3050fd3c1ae57783c1881cd808 | MATLAB | 629 | 22 | % openvibe toolbox for Matlab
% OV_getSignalOutputHeader.m
% -------------------------------
% Author : Laurent Bonnet (INRIA)
% Date : 28/07/2011
% Set the header information on a signal output.
% MEANT TO BE USED IN USER SCRIPT
function [errno, nb_features, labels] = OV_getFeatureVectorOutputHeader(box_in, output... |
b42400b8d2790bac4e7546bf08f16c3ac6a41e0ae8b26439d94877265ab805dc | MATLAB | 629 | 24 | function zef = zef_eeg_lead_field(zef)
if nargin == 0
zef = evalin('base','zef');
end
warning('off');
zef.lead_field_type = 1;
zef.imaging_method = 1;
zef_delete_original_field;
zef = zef_process_meshes(zef);
zef.sensors_attached_volume = zef_attach_sensors_volume(zef,zef.sensors);
zef = zef_lead_field_matrix(zef... |
d739c5b20baa459ccec5b51e4d27429989933fe4caff31b702a08914b4a0a366 | MATLAB | 629 | 30 | function rdm = rdm_fn(La, Lfem)
% Documentation
%
% Calculates the Relative Difference Measure (RDM) for a given analytical
% lead field La and a numerically produced Lfem.
%
% Inputs:
%
% - La: the analytical lead field (or other matrix)
%
% - Lfem: the numerical matrix we are comparing to La.
%
% Output
%
% - rdm: t... |
d82e8dee54fecea3b2d963f4fbc6f8c2f8f8144c0c68b2373c1f627204d1c24c | MATLAB | 630 | 15 | function plot_parameter_space_parameter_estimation(app)
newcolors = app.newcolors;
plambda_seq = app.params.p_lambda_sequence;
num_plambda = [1:app.params.p_lambda_count];
app.parameter_space_parameter_estimation.ColorOrder = newcolors;
app.parameter_space_parameter_estimation.NextPlot = 'replacechildren';
area(ap... |
27814da178b5f3860e96c1246133c7fb1adace8af100b485f6a424e6dd25c67e | MATLAB | 632 | 22 | function [p,chi2stat] = chi2test(mat2x2)
%UNTITLED Summary of this function goes here
% Detailed explanation goes here
% Observed data
n1 = mat2x2(1,1); N1 = mat2x2(1,2);
n2 = mat2x2(2,1); N2 = mat2x2(2,2);
% Pooled estimate of proportion
p0 = (n1+n2) / (N1+N2);
... |
c37dea9c2755ce8dc312cff759d3b745201a06eaf5615bb81d6e32fdbcb24009 | MATLAB | 632 | 33 | % from Means of Hermitian positive-definite matrices based on the log-determinant α-divergence function
% Zeineb Chebbi , Maher Moakher.
function A = logdet_mean(B)
K = size(B,3); % Nombre de matrices
A = mean(B,3);
tol = 10^-3;
imp = tol + 1;
while imp>tol
fc = zeros(size(B,1));
for i=1:K
fc = fc +... |
1ae9b0ea43e1f06563694bd4111e599fd77c0d91a2f4324db59b6193bd9ed289 | MATLAB | 633 | 24 | function zef_PlotSourceButton_Callback(~, ~)
try
treeObj = evalin('base','zef.h_source_tree.SourceTree');
catch
error('PlotSourceButton: treeObj not found in base workspace.');
end
try
h_axes = evalin('base','zef.h_axes1');
catch
error('PlotSourceButton: zef.h_axes1 not found in base workspace.');
end
... |
8c0b8a0f3f5a2b2be7ff8c9211ce2b84b80cc69bcac65727c05eba2eb13ddf6f | MATLAB | 633 | 23 |
function MaxProj = projectMaxAnalysis( stackY1, stackY2a, stackY2b )
% max projection, sd projection?
tic
MaxProj = max( stackY1, [], 3 );
%MaxProj2 = histeq( MaxProj );
df = figure; % target for data plot
imgf = figure;
mp = imshow( MaxProj );
clim( 'auto' );
dcm = datacursormode; % use cursor to id pixel for plot
dc... |
cc2f84c4fad2cc6c148dd1a4d20eaacd4d05be4d3f74547fef999ba24473c822 | MATLAB | 633 | 25 | function Hn = harmonicnumber(n,intForceType)
%harmonicnumber n'th harmonic number
% Hn = harmonicnumber(n)
if ~exist('intForceType','var') || isempty(intForceType)
intForceType = 0;
end
indApprox = intForceType == 1 | (n > (10^8)) & intForceType ~= 2;
Hn = zeros(size(n));
for intRunType=1:2
if intRunType... |
d6c841b30859359e01c133faf916088ed48238a60a217c5891e693c76a93c237 | MATLAB | 633 | 29 | function ETO_DeleteFcn
%UNTITLED Summary of this function goes here
% Detailed explanation goes here
%globals
global sFigETO;
global sETO;
%close
sFigETO.IsRunning = false;
%save config to ini
strPathFile = mfilename('fullpath');
cellDirs = strsplit(strPathFile,filesep);
strPath = strjoin(cellDirs(1:... |
3d34481afc89364d041757087b83111a55921d6f395339c2588d38730ad3c053 | MATLAB | 634 | 21 | function [ordered_maps,map_similarity,order] = align_maps2template(maps,templates,modality,keep_polarity)
simfun = microstate.functions.map_similarity_funhandle(modality,keep_polarity) ;
for iter = 1:size(templates,2)
R = simfun(maps',templates') ;
[j,i] = find(R == max(R(:))) ;
order(j) = i ;
ord... |
673e8c777f11ade5bc5f132cfe28481da7d713c3aa1bfe0741d59f141eb6054c | MATLAB | 634 | 32 | function prec = ssor ( A, kwargs )
%
% prec = ssor ( A, kwargs )
%
% Computes the SSOR preconditioner for the matrix A of a system Ax = b.
%
% kwargs:
%
% - coeff = 1
%
% The preconditioner constant used in the computation. The default value of 1
% corresponds to the Gauss--Seidel preconditioner.
%
arguments
... |
d104cef80ae4c058698b1035acb4cb575b7c0b63abe349ece14ac9c139a76523 | MATLAB | 634 | 24 | %Copyright © 2018- Sampsa Pursiainen & ZI Development Team
%See: https://github.com/sampsapursiainen/zeffiro_interface
function [void] = zef_switch_color(tag_str_1,tag_str_2,variable_name)
void = [];
mlapp_flag = evalin('base','zef.mlapp');
if mlapp_flag == 1
color_str = 'fontcolor';
else
color_str = 'foregro... |
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